Metagenome Family F098377

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098377
Family Type	Metagenome
Number of Sequences	103
Average Sequence Length	46 residues
Representative Sequence	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Number of Associated Samples	32
Number of Associated Scaffolds	103

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	55.67 %
% of genes near scaffold ends (potentially truncated)	67.96 %
% of genes from short scaffolds (< 2000 bps)	45.63 %
Associated GOLD sequencing projects	32
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (71.845 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water (96.117 % of family members)
Environment Ontology (ENVO)	Unclassified (96.117 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (96.117 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 68.00% β-sheet: 0.00% Coil/Unstructured: 32.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 103 Family Scaffolds
PF00078	RVT_1	1.94
PF04652	Vta1	0.97
PF04072	LCM	0.97
PF00224	PK	0.97
PF00005	ABC_tran	0.97
PF11931	SF3a60_Prp9_C	0.97

COG ID	Name	Functional Category	% Frequency in 103 Family Scaffolds
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.97
COG3315	O-Methyltransferase involved in polyketide biosynthesis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
All Organisms	root	All Organisms	28.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
cellular organisms	root	All Organisms → cellular organisms	25.24 %
Viruses	superkingdom	All Organisms → Viruses	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	25.24 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.91 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	19.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.91 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Chlorophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	18.45 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.91 %
Choanoflagellata	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Choanoflagellata	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
core chlorophytes	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	16.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.91 %
Craspedida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Choanoflagellata → Craspedida	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Chlorophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae	14.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.91 %
Trebouxiophyceae	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae	0.97 %
Salpingoecidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Choanoflagellata → Craspedida → Salpingoecidae	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
CS clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade	14.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.91 %
Trebouxiophyceae incertae sedis	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Trebouxiophyceae incertae sedis	0.97 %
Monosiga	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Choanoflagellata → Craspedida → Salpingoecidae → Monosiga	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Chlamydomonadales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	14.56 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.91 %
Monosiga brevicollis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Choanoflagellata → Craspedida → Salpingoecidae → Monosiga → Monosiga brevicollis	0.97 %
Elliptochloris clade	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Trebouxiophyceae incertae sedis → Elliptochloris clade	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Dunaliellaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae	8.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.91 %
Coccomyxa	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Trebouxiophyceae incertae sedis → Elliptochloris clade → Coccomyxa	0.97 %
Monosiga brevicollis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Choanoflagellata → Craspedida → Salpingoecidae → Monosiga → Monosiga brevicollis	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Dunaliella	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella	8.74 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.91 %
unclassified Coccomyxa (in: green algae)	no rank	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Trebouxiophyceae incertae sedis → Elliptochloris clade → Coccomyxa → unclassified Coccomyxa (in: green algae)	0.97 %
Monosiga brevicollis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Choanoflagellata → Craspedida → Salpingoecidae → Monosiga → Monosiga brevicollis	0.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.84 %
Dunaliella tertiolecta	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	5.83 %
Dunaliella viridis	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	2.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	2.91 %
Coccomyxa sp. Obi	species	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Trebouxiophyceae incertae sedis → Elliptochloris clade → Coccomyxa → unclassified Coccomyxa (in: green algae) → Coccomyxa sp. Obi	0.97 %
Monosiga brevicollis	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Choanoflagellata → Craspedida → Salpingoecidae → Monosiga → Monosiga brevicollis	0.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300011181\|Ga0136607_1038545	Not Available	551	Open in IMG/M
3300012028\|Ga0136584_1023456	Not Available	597	Open in IMG/M
3300012265\|Ga0136603_1026482	Not Available	663	Open in IMG/M
3300025351\|Ga0208135_115509	Not Available	598	Open in IMG/M
3300031209\|Ga0307955_1095756	Not Available	550	Open in IMG/M
3300031210\|Ga0307964_1016054	Not Available	1485	Open in IMG/M
3300031211\|Ga0307974_1000206	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	33223	Open in IMG/M
3300031211\|Ga0307974_1000237	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	31865	Open in IMG/M
3300031211\|Ga0307974_1000435	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	25281	Open in IMG/M
3300031211\|Ga0307974_1005287	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	9166	Open in IMG/M
3300031211\|Ga0307974_1005364	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	9105	Open in IMG/M
3300031211\|Ga0307974_1006419	Not Available	8260	Open in IMG/M
3300031211\|Ga0307974_1012603	Not Available	5450	Open in IMG/M
3300031211\|Ga0307974_1014674	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	4928	Open in IMG/M
3300031211\|Ga0307974_1019069	Not Available	4071	Open in IMG/M
3300031211\|Ga0307974_1022587	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	3576	Open in IMG/M
3300031211\|Ga0307974_1023381	Not Available	3484	Open in IMG/M
3300031211\|Ga0307974_1036688	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Choanoflagellata → Craspedida → Salpingoecidae → Monosiga → Monosiga brevicollis	2491	Open in IMG/M
3300031211\|Ga0307974_1047816	Not Available	2030	Open in IMG/M
3300031211\|Ga0307974_1049387	Not Available	1979	Open in IMG/M
3300031212\|Ga0307959_1118618	Not Available	666	Open in IMG/M
3300031212\|Ga0307959_1134393	Not Available	611	Open in IMG/M
3300031217\|Ga0307940_1095476	Not Available	558	Open in IMG/M
3300031218\|Ga0307976_1023907	Not Available	1365	Open in IMG/M
3300031221\|Ga0307948_1000725	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	22678	Open in IMG/M
3300031221\|Ga0307948_1003965	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	10933	Open in IMG/M
3300031221\|Ga0307948_1012700	Not Available	5771	Open in IMG/M
3300031221\|Ga0307948_1025783	Not Available	3432	Open in IMG/M
3300031221\|Ga0307948_1086918	Not Available	1148	Open in IMG/M
3300031222\|Ga0307972_1054115	Not Available	2020	Open in IMG/M
3300031222\|Ga0307972_1077880	Not Available	1503	Open in IMG/M
3300031222\|Ga0307972_1097769	Not Available	1224	Open in IMG/M
3300031225\|Ga0307942_1000038	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Trebouxiophyceae → Trebouxiophyceae incertae sedis → Elliptochloris clade → Coccomyxa → unclassified Coccomyxa (in: green algae) → Coccomyxa sp. Obi	64621	Open in IMG/M
3300031225\|Ga0307942_1000825	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	23293	Open in IMG/M
3300031225\|Ga0307942_1002475	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	15042	Open in IMG/M
3300031225\|Ga0307942_1006141	Not Available	9283	Open in IMG/M
3300031225\|Ga0307942_1011121	Not Available	6220	Open in IMG/M
3300031225\|Ga0307942_1015122	Not Available	4913	Open in IMG/M
3300031225\|Ga0307942_1029509	Not Available	2900	Open in IMG/M
3300031225\|Ga0307942_1092456	Not Available	1109	Open in IMG/M
3300031333\|Ga0307936_1009347	Not Available	3101	Open in IMG/M
3300031333\|Ga0307936_1048522	Not Available	1253	Open in IMG/M
3300031334\|Ga0307969_1141378	Not Available	536	Open in IMG/M
3300031335\|Ga0307951_1034523	Not Available	2286	Open in IMG/M
3300031335\|Ga0307951_1049129	Not Available	1632	Open in IMG/M
3300031335\|Ga0307951_1060133	All Organisms → cellular organisms → Eukaryota	1327	Open in IMG/M
3300031335\|Ga0307951_1062246	Not Available	1279	Open in IMG/M
3300031335\|Ga0307951_1079987	Not Available	973	Open in IMG/M
3300031339\|Ga0307932_1117729	Not Available	692	Open in IMG/M
3300031343\|Ga0307952_1022365	Not Available	2861	Open in IMG/M
3300031343\|Ga0307952_1039591	Not Available	1968	Open in IMG/M
3300031343\|Ga0307952_1071618	All Organisms → Viruses → Predicted Viral	1229	Open in IMG/M
3300031382\|Ga0307971_1047107	Not Available	1454	Open in IMG/M
3300031382\|Ga0307971_1057206	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella viridis	1277	Open in IMG/M
3300031382\|Ga0307971_1173116	Not Available	610	Open in IMG/M
3300031382\|Ga0307971_1214830	Not Available	526	Open in IMG/M
3300031387\|Ga0307947_1001867	Not Available	16832	Open in IMG/M
3300031387\|Ga0307947_1005432	Not Available	9791	Open in IMG/M
3300031387\|Ga0307947_1011350	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales → Dunaliellaceae → Dunaliella → Dunaliella tertiolecta	5787	Open in IMG/M
3300031387\|Ga0307947_1013316	All Organisms → cellular organisms → Eukaryota	5021	Open in IMG/M
3300031387\|Ga0307947_1021363	All Organisms → cellular organisms → Eukaryota	3209	Open in IMG/M
3300031387\|Ga0307947_1035488	Not Available	2022	Open in IMG/M
3300031387\|Ga0307947_1061942	All Organisms → Viruses → Predicted Viral	1266	Open in IMG/M
3300031392\|Ga0307975_1035393	Not Available	1924	Open in IMG/M
3300031392\|Ga0307975_1080794	Not Available	1225	Open in IMG/M
3300031392\|Ga0307975_1200144	Not Available	610	Open in IMG/M
3300031393\|Ga0307967_1036250	Not Available	2409	Open in IMG/M
3300031393\|Ga0307967_1058925	Not Available	1670	Open in IMG/M
3300031393\|Ga0307967_1092341	Not Available	1145	Open in IMG/M
3300031393\|Ga0307967_1192480	Not Available	579	Open in IMG/M
3300031393\|Ga0307967_1196613	Not Available	568	Open in IMG/M
3300031394\|Ga0307963_1003364	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	12707	Open in IMG/M
3300031394\|Ga0307963_1011248	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes	6334	Open in IMG/M
3300031394\|Ga0307963_1035149	Not Available	2245	Open in IMG/M
3300031395\|Ga0307957_1107064	Not Available	574	Open in IMG/M
3300031396\|Ga0307944_1009422	Not Available	2684	Open in IMG/M
3300031396\|Ga0307944_1047645	Not Available	1159	Open in IMG/M
3300031396\|Ga0307944_1131192	Not Available	642	Open in IMG/M
3300031397\|Ga0307960_1005157	Not Available	8056	Open in IMG/M
3300031397\|Ga0307960_1006724	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	7092	Open in IMG/M
3300031397\|Ga0307960_1028879	Not Available	2770	Open in IMG/M
3300031397\|Ga0307960_1072823	Not Available	1219	Open in IMG/M
3300031399\|Ga0307968_1000846	All Organisms → cellular organisms → Eukaryota → Viridiplantae	23675	Open in IMG/M
3300031399\|Ga0307968_1001233	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta → core chlorophytes → Chlorophyceae → CS clade → Chlamydomonadales	20655	Open in IMG/M
3300031399\|Ga0307968_1035741	Not Available	2068	Open in IMG/M
3300031399\|Ga0307968_1058891	All Organisms → cellular organisms → Eukaryota	1341	Open in IMG/M
3300031404\|Ga0307945_1006466	Not Available	9259	Open in IMG/M
3300031607\|Ga0307966_1006966	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Chlorophyta	8309	Open in IMG/M
3300031607\|Ga0307966_1010525	Not Available	6643	Open in IMG/M
3300031607\|Ga0307966_1022839	All Organisms → cellular organisms → Eukaryota	4231	Open in IMG/M
3300031607\|Ga0307966_1030218	Not Available	3541	Open in IMG/M
3300031607\|Ga0307966_1120836	Not Available	1261	Open in IMG/M
3300031607\|Ga0307966_1143041	All Organisms → Viruses → Predicted Viral	1093	Open in IMG/M
3300031684\|Ga0307946_1041307	Not Available	1865	Open in IMG/M
3300031684\|Ga0307946_1049358	Not Available	1616	Open in IMG/M
3300031684\|Ga0307946_1132688	Not Available	627	Open in IMG/M
3300031704\|Ga0307943_1081435	Not Available	1199	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	100.00%

Habitat	Taxonomy	Distribution
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	100.00%

Habitat	Taxonomy	Distribution
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	96.12%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	3.88%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300011181	Saline lake microbial communities from Deep Lake, Antarctica - Metagenome #681	Environmental	Open in IMG/M
3300012028	Saline lake microbial communities from Deep lake, Antarctica - Metagenome #401	Environmental	Open in IMG/M
3300012265	Saline lake microbial communities from Deep Lake, Antarctica - Metagenome TFF #695	Environmental	Open in IMG/M
3300025351	Saline lake microbial communities from Deep Lake, Antarctica - Antarctic Deep Lake Metagenome 02WF5 (SPAdes)	Environmental	Open in IMG/M
3300031209	Saline water microbial communities from Organic Lake, Antarctica - #439	Environmental	Open in IMG/M
3300031210	Saline water microbial communities from Organic Lake, Antarctica - #596	Environmental	Open in IMG/M
3300031211	Saline water microbial communities from Organic Lake, Antarctica - #784	Environmental	Open in IMG/M
3300031212	Saline water microbial communities from Organic Lake, Antarctica - #494	Environmental	Open in IMG/M
3300031217	Saline water microbial communities from Organic Lake, Antarctica - #124	Environmental	Open in IMG/M
3300031218	Saline water microbial communities from Organic Lake, Antarctica - #919	Environmental	Open in IMG/M
3300031221	Saline water microbial communities from Organic Lake, Antarctica - #280	Environmental	Open in IMG/M
3300031222	Saline water microbial communities from Organic Lake, Antarctica - #780	Environmental	Open in IMG/M
3300031225	Saline water microbial communities from Organic Lake, Antarctica - #175	Environmental	Open in IMG/M
3300031333	Saline water microbial communities from Organic Lake, Antarctica - #1	Environmental	Open in IMG/M
3300031334	Saline water microbial communities from Organic Lake, Antarctica - #710	Environmental	Open in IMG/M
3300031335	Saline water microbial communities from Organic Lake, Antarctica - #374	Environmental	Open in IMG/M
3300031339	Saline water microbial communities from Organic Lake, Antarctica - #48	Environmental	Open in IMG/M
3300031343	Saline water microbial communities from Organic Lake, Antarctica - #376	Environmental	Open in IMG/M
3300031382	Saline water microbial communities from Organic Lake, Antarctica - #714	Environmental	Open in IMG/M
3300031387	Saline water microbial communities from Organic Lake, Antarctica - #232	Environmental	Open in IMG/M
3300031391	Saline water microbial communities from Organic Lake, Antarctica - #437	Environmental	Open in IMG/M
3300031392	Saline water microbial communities from Organic Lake, Antarctica - #917	Environmental	Open in IMG/M
3300031393	Saline water microbial communities from Organic Lake, Antarctica - #648	Environmental	Open in IMG/M
3300031394	Saline water microbial communities from Organic Lake, Antarctica - #594	Environmental	Open in IMG/M
3300031395	Saline water microbial communities from Organic Lake, Antarctica - #490	Environmental	Open in IMG/M
3300031396	Saline water microbial communities from Organic Lake, Antarctica - #179	Environmental	Open in IMG/M
3300031397	Saline water microbial communities from Organic Lake, Antarctica - #542	Environmental	Open in IMG/M
3300031399	Saline water microbial communities from Organic Lake, Antarctica - #650	Environmental	Open in IMG/M
3300031404	Saline water microbial communities from Organic Lake, Antarctica - #228	Environmental	Open in IMG/M
3300031607	Saline water microbial communities from Organic Lake, Antarctica - #646	Environmental	Open in IMG/M
3300031684	Saline water microbial communities from Organic Lake, Antarctica - #230	Environmental	Open in IMG/M
3300031704	Saline water microbial communities from Organic Lake, Antarctica - #177	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0136607_10385452	3300011181	Saline Lake	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL*
Ga0136584_10234561	3300012028	Saline Lake	PPVNAACALLLLFVMAAAVAEAEAVAGGSHWCAWSSF*
Ga0136603_10264822	3300012265	Saline Lake	LLLLFVMAKAVAEVEAVAEASRTRPGGSHWRAWSSFRFSPSKLL*
Ga0208135_1155092	3300025351	Saline Lake	VKAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRF
Ga0307955_10957561	3300031209	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWPG
Ga0307964_10160541	3300031210	Saline Water	AACALLLLFVMAEAVAEAEAASLSAGDWASRIRPGGSHWRDWSSFRFSPAKPL
Ga0307974_10002067	3300031211	Saline Water	VNAACALLLLFVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307974_100023722	3300031211	Saline Water	VNAACALLLLFVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPLKPL
Ga0307974_100043527	3300031211	Saline Water	VNAACAMLLLFVMAEAVTEAEAEAAAEARGSHWRAWSSFHPQNHYK
Ga0307974_100528715	3300031211	Saline Water	VNAACALLLLFVMAEAVAEAEAASLSAGDWASRIRPGGSHWRDWSSFRFSPAKPL
Ga0307974_10053647	3300031211	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307974_100641910	3300031211	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWLAWSSFRFPPQNHYK
Ga0307974_10126037	3300031211	Saline Water	VNAACALLLPLVVAEAVAEAETVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307974_10146742	3300031211	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKPL
Ga0307974_10190691	3300031211	Saline Water	VNAACTLLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFQFSPSK
Ga0307974_10225874	3300031211	Saline Water	PVNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFLPSKLL
Ga0307974_10233812	3300031211	Saline Water	VNGVCALLLLFVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307974_10366881	3300031211	Saline Water	VKAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRA
Ga0307974_10478161	3300031211	Saline Water	NAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRYSPSKLL
Ga0307974_10493874	3300031211	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSP
Ga0307974_11184721	3300031211	Saline Water	VNAACALLLLLVMAEAVAEASRTRPGGSHWRAWSSFR
Ga0307959_11186181	3300031212	Saline Water	LPLVVAEAVAEAETVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307959_11343931	3300031212	Saline Water	VNAACALLLLLVMAEAVAEAEAVTEASRTRPGGSHWRAWSSFRFSPSKP
Ga0307940_10954761	3300031217	Saline Water	FIFEFESPPVIAACALLLLLVMAEAVAEAEAVAEASGTRPGGSHWRAWSSFQFSPSKPL
Ga0307976_10239072	3300031218	Saline Water	VNAACALLLLFVMAAAVAEAEAVAGGSHWRAWSSFRFSS
Ga0307948_10007253	3300031221	Saline Water	VNAACTLLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFQFSPSKPL
Ga0307948_10039659	3300031221	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSLGFSTSKL
Ga0307948_10127007	3300031221	Saline Water	VNAACALLLLLVMAGAVAEAEAVAEASRTWPGGSHWSSFRFSPSKLL
Ga0307948_10257831	3300031221	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSS
Ga0307948_10869182	3300031221	Saline Water	PVNAACALLLLFVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFPPSKLL
Ga0307972_10541151	3300031222	Saline Water	PVNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSP
Ga0307972_10778802	3300031222	Saline Water	ACALLLLLVMAEAVAEAEAVAEASRTWPGGSHCRAWSSFRFSPSKLL
Ga0307972_10977691	3300031222	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRA
Ga0307942_10000381	3300031225	Saline Water	VNAACALLLLLVMAEAVAEAKAVTEASRTRPGGSHWRAWSSFRFSPSKPL
Ga0307942_10008253	3300031225	Saline Water	VNADCALLLLFVMAEAVSEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307942_10024756	3300031225	Saline Water	VIAACALLLLLVMAEAVAEAEAVAEASGTRPGGSHWRAWSSFQFSPSKPL
Ga0307942_10061411	3300031225	Saline Water	VKAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSS
Ga0307942_10111211	3300031225	Saline Water	LLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFQFSPSKPL
Ga0307942_10151225	3300031225	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRYSPSKLL
Ga0307942_10295092	3300031225	Saline Water	VNAACALLLLLVMAEAVAEAEAVTEASRTRPGGSHWRAWSSFRFSPSKPL
Ga0307942_10924561	3300031225	Saline Water	ACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKP
Ga0307936_10093473	3300031333	Saline Water	VNAACALLLLFIMAEAVAEAKAVAEASRTRPGGSHWRAWSSFRFPPSKLL
Ga0307936_10485221	3300031333	Saline Water	LLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307969_11413782	3300031334	Saline Water	VNAACALLLLFVMAEAVAETEAAILSAGDWASRIRPGGSHW
Ga0307951_10345233	3300031335	Saline Water	EHFGRALSELVFEFESPPVNAACTLLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFQFSPSKPL
Ga0307951_10491293	3300031335	Saline Water	LSELVFEFESPPVNAACALLLLLVMAEAVAEASRTRPGGSHWRAWSSFQFSPLKPL
Ga0307951_10601331	3300031335	Saline Water	LLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307951_10622462	3300031335	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSF
Ga0307951_10799871	3300031335	Saline Water	LLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKP
Ga0307932_11177291	3300031339	Saline Water	VNAACALLLLFVMAKAVAEAEAVAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307952_10215973	3300031343	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSYWRAWSSFRFSPSKLL
Ga0307952_10223651	3300031343	Saline Water	VNADCALLLLFVMAEAVSEAEAVAEASRTRPGGSHWRAWSSFRF
Ga0307952_10395911	3300031343	Saline Water	VNAACALLLLLVMAEAVAEAEAVTEASRTRPGGSHWRAWSSLRFSPS
Ga0307952_10716181	3300031343	Saline Water	LLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKPL
Ga0307971_10471072	3300031382	Saline Water	VNAACTLLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAW
Ga0307971_10572061	3300031382	Saline Water	LLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFLPSKLL
Ga0307971_11731161	3300031382	Saline Water	NLFLTCALLLLFVMAVAVAEAEAVAGDSHWRAWCSFRFLSSKPL
Ga0307971_12148301	3300031382	Saline Water	VNAACALLLLFVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKL
Ga0307947_100186712	3300031387	Saline Water	VKAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFQFSPSKTL
Ga0307947_10054321	3300031387	Saline Water	VNAACALLLLLVMAEAVSEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307947_10113501	3300031387	Saline Water	VNAACALLLLFVMAEAVAEAEAVAEASRTRPGCSHWRAWSSF
Ga0307947_10133168	3300031387	Saline Water	CRELAFEFESPPVNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307947_10213635	3300031387	Saline Water	VNAACALLLLFVMAKAVAEVEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307947_10354884	3300031387	Saline Water	NAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSP
Ga0307947_10619421	3300031387	Saline Water	CALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKPL
Ga0307954_11042081	3300031391	Saline Water	VNAACALLLLLVMAEAVAEASRTRPGGSHWHAWSS
Ga0307975_10353931	3300031392	Saline Water	VNAACALLLLLVVAEAVAEAEAVAEASRARPGGSHWR
Ga0307975_10807941	3300031392	Saline Water	PPVNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307975_12001441	3300031392	Saline Water	MAEAVAEAEAVAEASRTRPGGSHWRAWSSLGFSTSKL
Ga0307967_10362502	3300031393	Saline Water	FESPPVNAACALLLLLVMAGAVAEAEAVAEASRTWPGGSHWSSFRFSPSKLL
Ga0307967_10589251	3300031393	Saline Water	VNAACVLLLLLFMAEAVAEAEAVAEASRTRPGGSHWRAMEL
Ga0307967_10923413	3300031393	Saline Water	CALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSP
Ga0307967_11924802	3300031393	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWHAWSSFR
Ga0307967_11966132	3300031393	Saline Water	PVNAACALLLLLVMAEAVAEAEAVAEASRTWPGGSHCRAWSSFRFSPSKLL
Ga0307963_100336413	3300031394	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASKTRPGGSHWRAWSSFRFSPSKLL
Ga0307963_10112481	3300031394	Saline Water	VNAACALLLLLVMTEAVAEASRTRPEGSHWRAWSS
Ga0307963_10351493	3300031394	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTRPGSSHWRAWSSFRFSPSKPLQ
Ga0307963_11064582	3300031394	Saline Water	VNAACALLLLLVMAEAVAEASRTRPGGSHWRAWSSFRFSPSK
Ga0307957_10859661	3300031395	Saline Water	LVMAEAVAEAEAVAEASRTRPGGSYWRAWSSFRFSPSKLL
Ga0307957_11070641	3300031395	Saline Water	SPPVNAACALLLLFIMAEAVAEAKAVAEASRTRPGGSHWRAWSSFRFPPSKLL
Ga0307944_10094222	3300031396	Saline Water	VNAACALLLLLVMAEAVAEAEAVAEASRTWPGGSHCRAWSSFRFSPSKLL
Ga0307944_10268114	3300031396	Saline Water	SKLVFECESPPVNAACALLLLLVMSEAVAEVSRTRPGGSHWRA
Ga0307944_10476451	3300031396	Saline Water	NADCALLLLFVMAEAVSEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307944_11311922	3300031396	Saline Water	VNAACALLLLFVMAEAVAETEAAILSAGDWASRIRPGGSHWRAWSS
Ga0307960_100515713	3300031397	Saline Water	VNAACALLLLLVMAEAVSEAEAVAEASRTRPGGSHWRAWSSFRFSPSKL
Ga0307960_100672412	3300031397	Saline Water	VNAACTLLLLLVMAEAVAEAEAVAEASRTRPGGSHWRA
Ga0307960_10288793	3300031397	Saline Water	VNAACTLLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFQFSPSKTL
Ga0307960_10728234	3300031397	Saline Water	LLLVMAEAVAEAEAVAEASKTRPGGSHWRAWSSFRFSPSKLL
Ga0307968_100084618	3300031399	Saline Water	VNAACALLLLFVMAEAVAETEAAILSAGDWASRIRPGGSHWRAWSSFRFSPPKPI
Ga0307968_10012331	3300031399	Saline Water	VNAACTLLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFQFSPS
Ga0307968_10357411	3300031399	Saline Water	LLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSP
Ga0307968_10588911	3300031399	Saline Water	ACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307945_100646615	3300031404	Saline Water	VKAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFQFSP
Ga0307966_10069669	3300031607	Saline Water	VNAACALLLLLVMAEAVAEAKAVTEASRTRPGGSHWRA
Ga0307966_10105251	3300031607	Saline Water	ELVFEFESPPVNAACALLLLLVMAEAVSEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307966_10228391	3300031607	Saline Water	VKAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAW
Ga0307966_10302186	3300031607	Saline Water	PVNAACALLLLLVMAEAVAEAEAVAEASKTRPGGSHWRAWSSFRFSPSKLL
Ga0307966_11208361	3300031607	Saline Water	ELAFEFESPPVNAACALLLLLVMAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKLL
Ga0307966_11430411	3300031607	Saline Water	MAEAVAEAEAVAEASRTRPGGSHWRAWSSFRFSPSKPL
Ga0307946_10413071	3300031684	Saline Water	LLLLFVMAEAVAEAEAASLSAGDWASRIRPGGSHWRDWSSFRFSPAKPL
Ga0307946_10493583	3300031684	Saline Water	RALSELVFEFESPPVNAACALLLLLVMAEAVAEASRTRPGGSHWRAWSSFQFSPLKPL
Ga0307946_11326882	3300031684	Saline Water	VNAACALLLLFVMAEAVAEAEAVAEASRTRPGGSHWRAWSS
Ga0307943_10814352	3300031704	Saline Water	ELVFEFESPPVNAACALLLLLVMAEAVAEASRTRPGGSHWRAWSSFQFSPLKPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098377

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences