Metagenome / Metatranscriptome Family F098322

Basic Information
Family ID	F098322
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	41 residues
Representative Sequence	MDFQQMGKQDNAGRFERGYLKVTTENLTNWTLPRCEKPPKTNE
Number of Associated Samples	16
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	19.23 %
% of genes near scaffold ends (potentially truncated)	35.58 %
% of genes from short scaffolds (< 2000 bps)	75.96 %
Associated GOLD sequencing projects	12
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Most Common Taxonomy
Group	Bacteria (61.538 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen (98.077 % of family members)
Environment Ontology (ENVO)	Unclassified (100.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Animal → Animal proximal gut (99.038 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF16168	AIDA	2.88
PF10509	GalKase_gal_bdg	2.88
PF00398	RrnaAD	1.92
PF00293	NUDIX	1.92
PF17189	Glyco_hydro_30C	1.92
PF04452	Methyltrans_RNA	1.92
PF04191	PEMT	1.92
PF03709	OKR_DC_1_N	1.92
PF12697	Abhydrolase_6	1.92
PF01134	GIDA	0.96
PF01381	HTH_3	0.96
PF07883	Cupin_2	0.96
PF07804	HipA_C	0.96
PF01813	ATP-synt_D	0.96
PF02321	OEP	0.96
PF07494	Reg_prop	0.96
PF02915	Rubrerythrin	0.96
PF01479	S4	0.96
PF02784	Orn_Arg_deC_N	0.96
PF03631	Virul_fac_BrkB	0.96
PF01894	UPF0047	0.96
PF00702	Hydrolase	0.96
PF07690	MFS_1	0.96
PF00815	Histidinol_dh	0.96
PF00258	Flavodoxin_1	0.96
PF01544	CorA	0.96
PF12245	Big_3_2	0.96
PF13638	PIN_4	0.96
PF01527	HTH_Tnp_1	0.96
PF01370	Epimerase	0.96
PF03063	Prismane	0.96
PF03466	LysR_substrate	0.96
PF02482	Ribosomal_S30AE	0.96
PF00924	MS_channel	0.96
PF00156	Pribosyltran	0.96
PF14520	HHH_5	0.96
PF08238	Sel1	0.96
PF00756	Esterase	0.96
PF02511	Thy1	0.96
PF00912	Transgly	0.96
PF00501	AMP-binding	0.96
PF00106	adh_short	0.96
PF02390	Methyltransf_4	0.96
PF01145	Band_7	0.96
PF13847	Methyltransf_31	0.96
PF01979	Amidohydro_1	0.96
PF00696	AA_kinase	0.96
PF01408	GFO_IDH_MocA	0.96
PF03729	DUF308	0.96
PF00970	FAD_binding_6	0.96
PF13280	WYL	0.96
PF13360	PQQ_2	0.96
PF02350	Epimerase_2	0.96
PF00133	tRNA-synt_1	0.96
PF00150	Cellulase	0.96
PF04616	Glyco_hydro_43	0.96
PF07520	SrfB	0.96
PF00248	Aldo_ket_red	0.96
PF00664	ABC_membrane	0.96
PF01496	V_ATPase_I	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0030	16S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)	Translation, ribosomal structure and biogenesis [J]	2.88
COG1385	16S rRNA U1498 N3-methylase RsmE	Translation, ribosomal structure and biogenesis [J]	1.92
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.92
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	0.96
COG5009	Membrane carboxypeptidase/penicillin-binding protein	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	0.96
COG1394	Archaeal/vacuolar-type H+-ATPase subunit D/Vma8	Energy production and conversion [C]	0.96
COG1544	Ribosome-associated translation inhibitor RaiA	Translation, ribosomal structure and biogenesis [J]	0.96
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.96
COG2730	Aryl-phospho-beta-D-glucosidase BglC, GH1 family	Carbohydrate transport and metabolism [G]	0.96
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.96
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.96
COG3292	Periplasmic ligand-binding sensor domain	Signal transduction mechanisms [T]	0.96
COG3550	Serine/threonine protein kinase HipA, toxin component of the HipAB toxin-antitoxin module	Signal transduction mechanisms [T]	0.96
COG3934	Endo-1,4-beta-mannosidase	Carbohydrate transport and metabolism [G]	0.96
COG4122	tRNA 5-hydroxyU34 O-methylase TrmR/YrrM	Translation, ribosomal structure and biogenesis [J]	0.96
COG4953	Membrane carboxypeptidase/penicillin-binding protein PbpC	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0019	Diaminopimelate decarboxylase	Amino acid transport and metabolism [E]	0.96
COG1269	Archaeal/vacuolar-type H+-ATPase subunit I/STV1	Energy production and conversion [C]	0.96
COG1166	Arginine decarboxylase (spermidine biosynthesis)	Amino acid transport and metabolism [E]	0.96
COG1152	CO dehydrogenase/acetyl-CoA synthase alpha subunit	Energy production and conversion [C]	0.96
COG1151	Hydroxylamine reductase (hybrid-cluster protein)	Energy production and conversion [C]	0.96
COG0744	Penicillin-binding protein 1B/1F, peptidoglycan transglycosylase/transpeptidase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0707	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.96
COG0525	Valyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.96
COG0495	Leucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.96
COG0432	Thiamin phosphate synthase YjbQ, UPF0047 family	Coenzyme transport and metabolism [H]	0.96
COG0381	UDP-N-acetylglucosamine 2-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0220	tRNA G46 N7-methylase TrmB	Translation, ribosomal structure and biogenesis [J]	0.96
COG0143	Methionyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.96
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	0.96
COG0060	Isoleucyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.54 %
Unclassified	root	N/A	38.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.54 %
Unclassified	root	N/A	38.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.54 %
Unclassified	root	N/A	38.46 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	17.31 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Lentisphaerae	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	15.38 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	6.73 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.96 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Lentisphaeria	class	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria	7.69 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	5.77 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.92 %
unclassified Lentisphaerota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota	1.92 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Victivallales	order	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales	5.77 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	5.77 %
unclassified Lentisphaeria	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria	1.92 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	1.92 %
unclassified Nitrosomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales	0.96 %
Phycisphaerales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales	0.96 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.96 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Victivallaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae	4.81 %
Lentisphaeria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	1.92 %
Oscillospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1.92 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	1.92 %
Gallionellales bacterium RIFOXYB12_FULL_54_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Gallionellales bacterium RIFOXYB12_FULL_54_9	0.96 %
Bacteroidetes bacterium ADurb.Bin174	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin174	0.96 %
Phycisphaeraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae	0.96 %
Eubacteriales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis	0.96 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Victivallis	genus	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis	4.81 %
Lentisphaeria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	1.92 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	1.92 %
Muribaculaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae	0.96 %
unclassified Phycisphaeraceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae	0.96 %
Eubacteriales Family XIII. Incertae Sedis	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Eubacteriales Family XIII. Incertae Sedis	0.96 %
unclassified Oscillospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae	0.96 %
Gallionellales bacterium RIFOXYB12_FULL_54_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Gallionellales bacterium RIFOXYB12_FULL_54_9	0.96 %
Bacteroidetes bacterium ADurb.Bin174	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin174	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Victivallis vadensis	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis → Victivallis vadensis	4.81 %
Lentisphaeria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	1.92 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	1.92 %
Phycisphaeraceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium	0.96 %
Oscillospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	0.96 %
Sodaliphilus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus	0.96 %
Eubacteriales Family XIII. Incertae Sedis	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Eubacteriales Family XIII. Incertae Sedis	0.96 %
Gallionellales bacterium RIFOXYB12_FULL_54_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Gallionellales bacterium RIFOXYB12_FULL_54_9	0.96 %
Bacteroidetes bacterium ADurb.Bin174	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin174	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.46 %
Victivallis vadensis	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis → Victivallis vadensis	4.81 %
Lentisphaeria bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	1.92 %
Lentisphaerota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	1.92 %
Sodaliphilus pleomorphus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus	0.96 %
Phycisphaeraceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium	0.96 %
Oscillospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	0.96 %
Eubacteriales Family XIII. Incertae Sedis	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Eubacteriales Family XIII. Incertae Sedis	0.96 %
Gallionellales bacterium RIFOXYB12_FULL_54_9	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Gallionellales bacterium RIFOXYB12_FULL_54_9	0.96 %
Bacteroidetes bacterium ADurb.Bin174	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin174	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2061766007\|rumenHiSeq_NODE_3640421_len_4287_cov_1_830184	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → Phycisphaerales → Phycisphaeraceae → unclassified Phycisphaeraceae → Phycisphaeraceae bacterium	4337	Open in IMG/M
3300003523\|DRAFT_10476098	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300024337\|Ga0255060_10217680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	930	Open in IMG/M
3300024337\|Ga0255060_10271535	Not Available	835	Open in IMG/M
3300024345\|Ga0255062_10588020	Not Available	542	Open in IMG/M
3300028048\|Ga0256405_10286719	Not Available	1006	Open in IMG/M
3300028048\|Ga0256405_10295667	Not Available	982	Open in IMG/M
3300028797\|Ga0265301_10000314	All Organisms → cellular organisms → Bacteria	74145	Open in IMG/M
3300028797\|Ga0265301_10001986	All Organisms → cellular organisms → Bacteria	24930	Open in IMG/M
3300028797\|Ga0265301_10002339	All Organisms → cellular organisms → Bacteria	22119	Open in IMG/M
3300028797\|Ga0265301_10003069	All Organisms → cellular organisms → Bacteria	18197	Open in IMG/M
3300028797\|Ga0265301_10010710	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis → Victivallis vadensis	8152	Open in IMG/M
3300028797\|Ga0265301_10011355	Not Available	7867	Open in IMG/M
3300028797\|Ga0265301_10017882	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis → Victivallis vadensis	5923	Open in IMG/M
3300028797\|Ga0265301_10018469	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis → Victivallis vadensis	5806	Open in IMG/M
3300028797\|Ga0265301_10133037	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	1895	Open in IMG/M
3300028797\|Ga0265301_10315887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae → unclassified Oscillospiraceae → Oscillospiraceae bacterium	1172	Open in IMG/M
3300028797\|Ga0265301_10730438	Not Available	725	Open in IMG/M
3300028805\|Ga0247608_10131237	Not Available	2401	Open in IMG/M
3300028805\|Ga0247608_10273343	All Organisms → cellular organisms → Bacteria	1670	Open in IMG/M
3300028805\|Ga0247608_10291201	Not Available	1616	Open in IMG/M
3300028805\|Ga0247608_10664082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → unclassified Nitrosomonadales → Gallionellales bacterium RIFOXYB12_FULL_54_9	1008	Open in IMG/M
3300028805\|Ga0247608_10995960	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300028805\|Ga0247608_11052883	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	749	Open in IMG/M
3300028805\|Ga0247608_11186749	Not Available	690	Open in IMG/M
3300028832\|Ga0265298_10039938	All Organisms → cellular organisms → Bacteria	5014	Open in IMG/M
3300028832\|Ga0265298_10538018	Not Available	1059	Open in IMG/M
3300028832\|Ga0265298_10570535	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300028832\|Ga0265298_11026019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	713	Open in IMG/M
3300028832\|Ga0265298_11420396	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300028832\|Ga0265298_11715352	Not Available	514	Open in IMG/M
3300028887\|Ga0265299_10185156	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300028887\|Ga0265299_10212721	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300028887\|Ga0265299_10269440	Not Available	1438	Open in IMG/M
3300028887\|Ga0265299_10304856	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium ADurb.Bin174	1347	Open in IMG/M
3300028887\|Ga0265299_10313937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Oscillospiraceae	1326	Open in IMG/M
3300028887\|Ga0265299_10742588	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300028887\|Ga0265299_11029681	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	685	Open in IMG/M
3300028887\|Ga0265299_11476199	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	553	Open in IMG/M
3300028914\|Ga0265300_10089811	All Organisms → cellular organisms → Bacteria	2075	Open in IMG/M
3300028914\|Ga0265300_10199094	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis → Victivallis vadensis	1368	Open in IMG/M
3300028914\|Ga0265300_10290284	All Organisms → cellular organisms → Bacteria	1117	Open in IMG/M
3300028914\|Ga0265300_10486579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	844	Open in IMG/M
3300028914\|Ga0265300_10756646	Not Available	657	Open in IMG/M
3300028914\|Ga0265300_10879626	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300028914\|Ga0265300_10976447	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300028914\|Ga0265300_11027830	Not Available	549	Open in IMG/M
3300028914\|Ga0265300_11138833	Not Available	516	Open in IMG/M
3300031993\|Ga0310696_10037330	All Organisms → cellular organisms → Bacteria	5405	Open in IMG/M
3300031993\|Ga0310696_10160728	All Organisms → cellular organisms → Bacteria	2463	Open in IMG/M
3300031993\|Ga0310696_10170779	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales → Victivallaceae → Victivallis → Victivallis vadensis	2383	Open in IMG/M
3300031993\|Ga0310696_10316250	All Organisms → cellular organisms → Bacteria	1697	Open in IMG/M
3300031993\|Ga0310696_10423053	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300031993\|Ga0310696_10627274	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300031993\|Ga0310696_10919941	Not Available	921	Open in IMG/M
3300031993\|Ga0310696_10952589	Not Available	902	Open in IMG/M
3300031993\|Ga0310696_10960554	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	898	Open in IMG/M
3300031993\|Ga0310696_11023690	Not Available	864	Open in IMG/M
3300031993\|Ga0310696_11084305	Not Available	834	Open in IMG/M
3300031993\|Ga0310696_11112420	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300031993\|Ga0310696_11194301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Eubacteriales incertae sedis → Eubacteriales Family XIII. Incertae Sedis	786	Open in IMG/M
3300031993\|Ga0310696_11258248	Not Available	761	Open in IMG/M
3300031993\|Ga0310696_11545541	Not Available	670	Open in IMG/M
3300031993\|Ga0310696_11673237	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300031993\|Ga0310696_11986687	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	571	Open in IMG/M
3300031993\|Ga0310696_12113414	Not Available	548	Open in IMG/M
3300031994\|Ga0310691_10397974	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300031994\|Ga0310691_10851387	Not Available	977	Open in IMG/M
3300031998\|Ga0310786_10096520	All Organisms → cellular organisms → Bacteria → PVC group	3416	Open in IMG/M
3300031998\|Ga0310786_10104865	All Organisms → cellular organisms → Bacteria	3267	Open in IMG/M
3300031998\|Ga0310786_10114780	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	3111	Open in IMG/M
3300031998\|Ga0310786_10671749	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300031998\|Ga0310786_10775407	Not Available	1064	Open in IMG/M
3300031998\|Ga0310786_10816019	All Organisms → cellular organisms → Bacteria	1032	Open in IMG/M
3300031998\|Ga0310786_10900376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	973	Open in IMG/M
3300031998\|Ga0310786_10963185	Not Available	934	Open in IMG/M
3300031998\|Ga0310786_11210028	Not Available	812	Open in IMG/M
3300031998\|Ga0310786_11397101	Not Available	742	Open in IMG/M
3300031998\|Ga0310786_11416013	Not Available	736	Open in IMG/M
3300031998\|Ga0310786_11452511	Not Available	724	Open in IMG/M
3300031998\|Ga0310786_11593801	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	683	Open in IMG/M
3300031998\|Ga0310786_11629628	Not Available	673	Open in IMG/M
3300031998\|Ga0310786_11661641	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Muribaculaceae → Sodaliphilus → Sodaliphilus pleomorphus	665	Open in IMG/M
3300031998\|Ga0310786_11937107	Not Available	603	Open in IMG/M
3300031998\|Ga0310786_12095493	Not Available	572	Open in IMG/M
3300031998\|Ga0310786_12328842	Not Available	533	Open in IMG/M
3300032030\|Ga0310697_10432188	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → unclassified Lentisphaerota → Lentisphaerota bacterium	1368	Open in IMG/M
3300033463\|Ga0310690_10010491	All Organisms → cellular organisms → Bacteria	11523	Open in IMG/M
3300033463\|Ga0310690_10016725	Not Available	8772	Open in IMG/M
3300033463\|Ga0310690_10021927	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → Victivallales	7553	Open in IMG/M
3300033463\|Ga0310690_10045832	All Organisms → cellular organisms → Bacteria	5060	Open in IMG/M
3300033463\|Ga0310690_10059738	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae	4391	Open in IMG/M
3300033463\|Ga0310690_10112017	All Organisms → cellular organisms → Bacteria → PVC group → Lentisphaerae → Lentisphaeria → unclassified Lentisphaeria → Lentisphaeria bacterium	3132	Open in IMG/M
3300033463\|Ga0310690_10186219	All Organisms → cellular organisms → Bacteria	2372	Open in IMG/M
3300033463\|Ga0310690_10306866	All Organisms → cellular organisms → Bacteria	1805	Open in IMG/M
3300033463\|Ga0310690_10362878	All Organisms → cellular organisms → Bacteria	1646	Open in IMG/M
3300033463\|Ga0310690_10468382	Not Available	1429	Open in IMG/M
3300033463\|Ga0310690_10551522	Not Available	1304	Open in IMG/M
3300033463\|Ga0310690_10818196	Not Available	1044	Open in IMG/M
3300033463\|Ga0310690_11039029	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300033463\|Ga0310690_11609963	Not Available	701	Open in IMG/M
3300033463\|Ga0310690_12455802	Not Available	541	Open in IMG/M
3300033463\|Ga0310690_12592110	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300034645\|Ga0371491_163373	Not Available	569	Open in IMG/M

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
Powered by PDBe Molstar

Habitat	Taxonomy	Distribution
Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Rumen	98.08%
Bovine Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Bovine Rumen	0.96%
Camel Rumen	Host-Associated → Mammals → Digestive System → Foregut → Rumen → Camel Rumen	0.96%

Protein ID	Sample Taxon ID	Habitat	Sequence
_HiSeq_25785320	2061766007	Bovine Rumen	MDFLRMGKKTNAGRFERGYLKVTTENLTSWTLSRREKPPNTNF
DRAFT_104760982	3300003523	Camel Rumen	MDFQRMDKKASAGRFERGYLKVTTENLTSWALSEREKPPKTNF*
Ga0255060_102176801	3300024337	Rumen	MGKKTNAGRFERGYPKVTTENLPSWTLSGREKPPNTNFQ
Ga0255060_102715351	3300024337	Rumen	MDFQRMDKIANAERFERGGLKATTENLASWTLGGREKPTKTII
Ga0255062_105880202	3300024345	Rumen	MDFQRMDKIANAERFERGGLKATTENLASWTLGGREKPTK
Ga0256405_102867191	3300028048	Rumen	MDFQRMDKKANAGRFERGYLKVTTENLTSWTLSRREKPPKTNF
Ga0256405_102956673	3300028048	Rumen	MDFQQTGKQDDAGRFERGCLKLTTGNLPNRDLPGCEKPSNPKK
Ga0265301_100003146	3300028797	Rumen	MGKQDNAGRFERGYLKVTTENLTNWYLPRCEKPPEIN
Ga0265301_1000198612	3300028797	Rumen	MDFQRMGKQDNAGRFEGGYPKVTTENLASWTLPRREKPPKTNF
Ga0265301_1000233913	3300028797	Rumen	MGKKANAGRFERGYLKVTTENLTNWNLPRCEKPLKTK
Ga0265301_100030695	3300028797	Rumen	MDFQQMGKQDNAGRFERGYLKVTTENLPNWNLPGCEKPPEINE
Ga0265301_100107103	3300028797	Rumen	MDFQQMGKQDNAGRFECGYLKVTTENLTNWNLPGCEKPPEISE
Ga0265301_100113553	3300028797	Rumen	MGKQDKAERLERGYLKATTENLANWNLPGCEKTPGPNE
Ga0265301_100178827	3300028797	Rumen	MDFQHMGQKANAGRFELGYLKVTTENLTIWTLLKREKPPKTNF
Ga0265301_100184695	3300028797	Rumen	MDFQQMGKQDNAGRFECGYLKVTTENLTNWNLPKCEKPPKTN
Ga0265301_101330373	3300028797	Rumen	MDFQQTGKQDNAGRFERGYLKVTTENLTNWDLPGCEKPPKTNK
Ga0265301_103158872	3300028797	Rumen	MDFQQMGKQDNAGRFERGYLKVTTENLTNWTLPKCEKPPKTNE
Ga0265301_107304381	3300028797	Rumen	MGQKANAGRFELGYLKVTTENLTIWTLLKREKPPKTNF
Ga0247608_101312374	3300028805	Rumen	MDFQQTGKQDDAGRFERGCLKLSTGNLPNRDLPGCEKPSNPKK
Ga0247608_102733431	3300028805	Rumen	YLLKFGRMDFQRMGKKTNAGRFERGYLMVTTENLTSWTLPGREKPPKTNFQRCPDAV
Ga0247608_102912013	3300028805	Rumen	MDFQRMGKKTNAGRFERGCLKVTTEKLTSWTLPGREKPPKTNF
Ga0247608_106640823	3300028805	Rumen	KDNAERSERGYLKVTTENLASWTLSGREKPPNTYF
Ga0247608_109959601	3300028805	Rumen	DFQRMGKKTNAGRFERGCLKVTTDNFASWTLSGREKPPKTNFQR
Ga0247608_110528831	3300028805	Rumen	KFDRIDFQRMGKKDNAERFERGYLKVTTENLTSWTLSRREKPPKTNF
Ga0247608_111867492	3300028805	Rumen	DPKDNAGRFERGYLKVTTENLTSWTLSRREKPPKTNY
Ga0265298_100399386	3300028832	Rumen	MGKQDNAGRFERGYLKVTTENLTNWNLPEREKPPNTNF
Ga0265298_105380182	3300028832	Rumen	MGFQQTGKQDNAGRFERGYLKVTTENLTSWDLPGCEKPPKTNK
Ga0265298_105705352	3300028832	Rumen	MDFQRMDQKANAGRFERGYLKVTTENLANWNWSGREKPPKTNF
Ga0265298_110260191	3300028832	Rumen	MDFQQMGKQDNAGRFERGYLKVTTENLTNWTLPRCEKPPKTNE
Ga0265298_114203961	3300028832	Rumen	MDFQRMGKEANAGRFERGYLKVTTENLTNWTLLKREKPPKTIF
Ga0265298_117153522	3300028832	Rumen	MVFQRMGKQDNAGRFERGYLKVTTDNLTNWNLPEREKPPNTNC
Ga0265299_101851561	3300028887	Rumen	RGKRDNAGRFERGYLKVTTENLTSWDLPGREKPPKSFF
Ga0265299_102127212	3300028887	Rumen	MDFQQMGKQDNAGRFERGYPKVTTENLTSWNLPRCEKPPEIN
Ga0265299_102694402	3300028887	Rumen	MDFQQTGKLDNAGRFERGYLKVTTENLTSWDLPGCEKPPKTNK
Ga0265299_103048563	3300028887	Rumen	MVFQQTGKQDNAGRFERGYLKVTIENLTNRDLPGCEKPPETNE
Ga0265299_103139372	3300028887	Rumen	MVFQQTGKQDNAGRFERGYLKVTIENLTNWDLPGCEKPPKTNE
Ga0265299_107425882	3300028887	Rumen	MDFQQTGKQDNAGRFERGYLKVTTENLTNWNLPGCEKPPKTNE
Ga0265299_110296811	3300028887	Rumen	MVFQQMGKQDNSGRFECGCLKAATENLADWDLPMCEKPPEIY
Ga0265299_114761992	3300028887	Rumen	SKKANAGRFERGYLKVTTENLPSWTLLRREKPPKTNF
Ga0265300_100898114	3300028914	Rumen	MGKQDNAGRFECGYLKVTTENLTNWNLPEREKPPNTNF
Ga0265300_101990942	3300028914	Rumen	MDFQQTGKQDNAGRFERGCLKVTTENLTNWDLSGCEKPPKTNE
Ga0265300_102902842	3300028914	Rumen	MDFQQMGKQANAGRFERGYLKVTTEKLTNWDLPGCEKPPKTNE
Ga0265300_104865792	3300028914	Rumen	MDFQQTGKQDNAGRFERGYLKVTTENLTSWDLPGCEKPPKTN
Ga0265300_107566461	3300028914	Rumen	MDFQQTGKLDNAGRFERGHLKVTTENLTNWDLPGCEKPPKTNQ
Ga0265300_108796261	3300028914	Rumen	MDFQQMGKQDNAGRFERGYLKVTTENLTNWNLPGCEKPPETNE
Ga0265300_109764472	3300028914	Rumen	MDFQRMGKEANAGRFERGYLKVTTEKLTNWTLLKREKPPKTNF
Ga0265300_110278302	3300028914	Rumen	MDFQRMGKQDNAGRFEGGYPKVTTENLASWTLPRR
Ga0265300_111388331	3300028914	Rumen	MDFQWMSQKANAGRFERGYLKVTTDNLTNWTLLEHEKPPKTNF
Ga0310696_100373302	3300031993	Rumen	MDFQQMGKQANAGSFERGCLKVTTENLTNWTLLRCEKPPKTNE
Ga0310696_101607282	3300031993	Rumen	MDFQRMGKEANAGRFERGYLKVTTENLTNWTLLKREKPPKTNF
Ga0310696_101707792	3300031993	Rumen	MVFQQTGKQDNAGRFERGYLKVTTENLTSWDLPGCEKPPKTNE
Ga0310696_103162502	3300031993	Rumen	MDFQRMDQKANAGRFEDGYLKVTTENLAIWNWSKREKPPKTIF
Ga0310696_104230531	3300031993	Rumen	MDFQRMNPKTNAGRFEGGYLKETTENLANWNWSRREKLPKTNF
Ga0310696_106272742	3300031993	Rumen	MDFQRMDKKANAGRFERGYLKVTTENLTSWTLFRREKPPKTNF
Ga0310696_109199412	3300031993	Rumen	MDFQRMGKQDNAGRFEGGYLKVTTENLTNWDLSGREKPPKTNF
Ga0310696_109525892	3300031993	Rumen	MDFQQMGKQDNAGRFERGYLKVTTENLANWNLPRCEKPSQTNE
Ga0310696_109605542	3300031993	Rumen	MDFQRMGKEANAGRFERGYLKVTTENLANWTLLRREKPPKTIF
Ga0310696_110236902	3300031993	Rumen	MVFQQMGKQDNAGRFERGYLKVTTENLTNWDLPGCEKPPKTNE
Ga0310696_110843052	3300031993	Rumen	MDFQRMGKEANAGKFERGYLKVTAEKLTNWTLLRREKPPKTNF
Ga0310696_111124202	3300031993	Rumen	MDFQQMGKQDNAGRFERGYLKVTTENLTNWDLPGYEKPPKTNQ
Ga0310696_111943012	3300031993	Rumen	MDFQRMGKQDNAGRFERGYLKVTTENLTNWNLPEREKPPNTNF
Ga0310696_112582481	3300031993	Rumen	MDQKTNAGRFERGCLKVTTENLANWNWSGREKPPKTNC
Ga0310696_115455411	3300031993	Rumen	MDFQQMSKKANAGRFERGYLKVTADNLTNWTLLRCE
Ga0310696_116732372	3300031993	Rumen	MDFQQMGKQDNAGRFERGYLKVTTDNLTNWDLPRCEKPLKTN
Ga0310696_119866872	3300031993	Rumen	DFQQMGKQDNAGRFECGYLKVTTENLANWTLPRCEKPPEIN
Ga0310696_121134141	3300031993	Rumen	MDFQQMGKQDNAGRFERGYLKVTTENLTNWNLPRCE
Ga0310691_103979743	3300031994	Rumen	MDFQRMGKKANAGRFERGYLKVTTENLTSWTLSRREKPPKTN
Ga0310691_108513871	3300031994	Rumen	RMDFQRMGKKTNAGRFERGYLKVTTENLTSWTLSGREKPPNTNF
Ga0310786_100965202	3300031998	Rumen	MDFQQMGKQDNAGRFERGCLKVTTENLANWNLPGCEKPPKTNE
Ga0310786_101048653	3300031998	Rumen	MDFQRMGKQDNAGRFERGYLKVTTENLTNWNLPEREKPPNTNY
Ga0310786_101147802	3300031998	Rumen	MGKEANAGRFERGYLKVTTENLTNWTLLKREKPPKTNF
Ga0310786_106717492	3300031998	Rumen	MDFQQMGKQDNAGRFERGYLKVTTENLTKWNLPGCEKPPETNE
Ga0310786_107754071	3300031998	Rumen	TGKLDNAGRFERGYLKVTTENLTSWDLPGCEKPPKTNK
Ga0310786_108160191	3300031998	Rumen	MDFQQAGKLDNAGRFERGYLKVTTENLTNWNLPGCEKPPETNE
Ga0310786_109003762	3300031998	Rumen	MDFQQMGKQDNAGRFERGYLKVTTDNLTNWTLPRCEKPLKTNE
Ga0310786_109631852	3300031998	Rumen	DRMVFQRMGKQDNAGRFERGYLKVTTENLTSWNLSGREKPPKTNC
Ga0310786_112100282	3300031998	Rumen	MGKKANAGRFERGYLKATTENLSSWILPRREKPPETNEWRGPE
Ga0310786_113971012	3300031998	Rumen	MDFQQMGKQDNAGRFEGGYLKVTTENLTNWTLPRCE
Ga0310786_114160131	3300031998	Rumen	KANAGRFERGYLKVTTENLANWNWSGREKPPKTNF
Ga0310786_114525112	3300031998	Rumen	GISIRSIGWGFQQMGKQDNAGRFERGYLKVTTENLTNWTLPRCEKPPKTNE
Ga0310786_115938011	3300031998	Rumen	QMDKQDNAERFESGYLKITTENLTNWNLPMREMPPEIN
Ga0310786_116296282	3300031998	Rumen	EGMDFQQMGKQDNAGRFECGSLKAATENLTNRTLPGCEKPPKTS
Ga0310786_116616412	3300031998	Rumen	MDFQQTGKLDNAGRFERGYLKVTTENLTNWDLPGCEKPPKTNK
Ga0310786_119371071	3300031998	Rumen	MDFQRMSKKANAGRFERGYLNVTTENLPSWTLLRREKPPKTNYF
Ga0310786_120954931	3300031998	Rumen	MDFQQTGKQDNAGRFERGYLKVTTENLTSWDLPGCEKPPKTNQ
Ga0310786_123288422	3300031998	Rumen	PASVSQKGISINSMRMDFQHMGKQDNAGRFECGYLKVTTENLTNWILSRCEKPPKTN
Ga0310697_104321881	3300032030	Rumen	AGRIERGCLKVTTEKLTSWTLSGREKPPETIFRGAL
Ga0310690_100104917	3300033463	Rumen	MDFQQMGKQDNAGRFECGYLKVTTENLTNWNLPGCEKPPEINE
Ga0310690_100167251	3300033463	Rumen	RMSKKANAGRFERGYLNVTTENLPSWTLLRREKPPKTNF
Ga0310690_100219272	3300033463	Rumen	MGKQDNAERFERGYPKVTTENLTNWTLLRREKPPKTIF
Ga0310690_100458322	3300033463	Rumen	MDFQQMGKQANAGRFERGYLKVTTEKLTNWDLPGCEKPPKTNQ
Ga0310690_100597383	3300033463	Rumen	MGKEANAGKVERGYLKVTTEKLTNWTLLRREKPPKTNF
Ga0310690_101120172	3300033463	Rumen	ISKFDRMDFQRMGKEANAGRFERGYLKVTTENLTNWTLLKREKPPKTNF
Ga0310690_101862191	3300033463	Rumen	MDFQRMGKQDNAGRFECGYQKVTTENLTNGNLPEREKPPNTNFQRCPL
Ga0310690_103068662	3300033463	Rumen	MDFQRMGKQDNAGRFEGGYPKVTTENLASWTLPRREKPPKTIF
Ga0310690_103628783	3300033463	Rumen	MDFQQMGKQDNAGRFERGYLKVTTENLTNWNLPRCEKPPEVN
Ga0310690_104683821	3300033463	Rumen	QQMGKQDNAGRFERGYLKVTTENLTNWTLPRCEKPPKTNE
Ga0310690_105515221	3300033463	Rumen	SFERMDFQQMGKQDNAGRFEGGYLKVTTEKLTNWNLPRCEKPSQTN
Ga0310690_108181961	3300033463	Rumen	MDQKTNAGRFERGYLKVTTENLANWTWSGREKPPK
Ga0310690_110390292	3300033463	Rumen	MDFQQMGKQDNAGRFERGYQKVTTENLTNWNLPGCEKPPKTNE
Ga0310690_116099631	3300033463	Rumen	KFDRMDFQRMGKEANAGRFERGCLKVTTEKLTNWTLLRREKPPKTNY
Ga0310690_124558021	3300033463	Rumen	MDQKANAGRFERGYLKVTTENLANWNWSGREKPPKTNF
Ga0310690_125921102	3300033463	Rumen	MDFQQMVKQDNAGRFERGYLKVTTENLTKWNLPGCEKPPETNE
Ga0371491_163373_461_568	3300034645	Rumen	MGKKTNAGRFERGYLKVTTENLASWTLSRREKPPNT

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098322

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2061766007	Bovine rumen microbial communities fromthe University of Illinois at Urbana-Champaign, USA, that are switchgrass associated - Sample 470	Host-Associated	Open in IMG/M
3300003523	Camel rumen microbial communities from Jandagh-Isfahan, Iran - Sample 1	Host-Associated	Open in IMG/M
3300024337	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 RNA GHGlow gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300024345	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1770 RNA GHGhigh gp2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300028048	Bovine rumen microbial communities from Lethbridge, Alberta, Canada - RJG_02	Host-Associated	Open in IMG/M
3300028797	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04	Host-Associated	Open in IMG/M
3300028805	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2	Host-Associated	Open in IMG/M
3300028832	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_01	Host-Associated	Open in IMG/M
3300028887	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02	Host-Associated	Open in IMG/M
3300028914	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03	Host-Associated	Open in IMG/M
3300031993	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_02 (v2)	Host-Associated	Open in IMG/M
3300031994	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300031998	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_03 (v2)	Host-Associated	Open in IMG/M
3300032030	Sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1728 DNA GHGlow gp2 (v2)	Host-Associated	Open in IMG/M
3300033463	Bovine rumen microbial communities from tropical cattle in Woodstock, Queensland, Australia - Gonzalo_04 (v2)	Host-Associated	Open in IMG/M
3300034645	Metatranscriptome of sheep rumen microbial communities from Palmerston North, Manawatu-Wanganui, New Zealand - 1766 RNA GHGlow gp2 (Metagenome Metatranscriptome) (NovaSeq)	Host-Associated	Open in IMG/M

Hidden Markov Model


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Geographical Distribution

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