NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F098306

Metagenome / Metatranscriptome Family F098306

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F098306
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 144 residues
Representative Sequence ICRRMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINASKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKAAEPKPAPSSPVDEPTDVTR
Number of Associated Samples 46
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 50.96 %
% of genes near scaffold ends (potentially truncated) 37.50 %
% of genes from short scaffolds (< 2000 bps) 90.38 %
Associated GOLD sequencing projects 46
AlphaFold2 3D model prediction Yes
3D model pTM-score0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (68.269 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(36.538 % of family members)
Environment Ontology (ENVO) Unclassified
(40.385 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(44.231 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122.124.126.128.130.132.134.136.138.140.142.144.146.148.150.152.154.156.158.160.162.164.166.168.170.172.174.176.178.180.182.184.186.188.190.192.194.196.198.200.202.204
1FWIRA_07386090
22PV_04405270
3INPhiseqgaiiFebDRAFT_1056457452
4INPhiseqgaiiFebDRAFT_1056462373
5C688J35102_1185485341
6Ga0007419J51692_11129031
7Ga0062593_1007418441
8Ga0063455_1001433561
9Ga0062590_1009485921
10Ga0062590_1013144932
11Ga0062591_1016409811
12Ga0058860_121921363
13Ga0070665_1024078421
14Ga0068866_112945821
15Ga0068860_1014100722
16Ga0105245_126031541
17Ga0105249_122416452
18Ga0126311_114417212
19Ga0126382_121659741
20Ga0126319_16313572
21Ga0127503_106366382
22Ga0127503_109563183
23Ga0126317_110329092
24Ga0137364_106375222
25Ga0150985_1010625763
26Ga0150985_1011357353
27Ga0150985_1014733855
28Ga0150985_1032690833
29Ga0150985_1033116384
30Ga0150985_1042935992
31Ga0150985_1057252831
32Ga0150985_1059013774
33Ga0150985_1099767051
34Ga0150985_1110564122
35Ga0150985_1114099011
36Ga0150985_1114255391
37Ga0150985_1117169675
38Ga0150985_1129535371
39Ga0150985_1146832492
40Ga0150985_1153780723
41Ga0150985_1158325253
42Ga0150985_1163323503
43Ga0150985_1193190041
44Ga0150985_1202747082
45Ga0150985_1208983643
46Ga0150984_1003835062
47Ga0150984_1032878403
48Ga0150984_1033594373
49Ga0150984_1049888342
50Ga0150984_1051326703
51Ga0150984_1055838702
52Ga0150984_1059575462
53Ga0150984_1088863503
54Ga0150984_1137533561
55Ga0150984_1138701651
56Ga0150984_1166889671
57Ga0150984_1174865753
58Ga0150984_1187224912
59Ga0150984_1188005601
60Ga0150984_1217090923
61Ga0164301_116137861
62Ga0164302_106360052
63Ga0164302_108816542
64Ga0164304_111648281
65Ga0164305_102307661
66Ga0190272_108587451
67Ga0184647_11231581
68Ga0184644_16242421
69Ga0184642_11398333
70Ga0222625_13194163
71Ga0207641_123639232
72Ga0308203_10184053
73Ga0308202_10121941
74Ga0308202_10201572
75Ga0308202_10344482
76Ga0308202_10981772
77Ga0308206_10605622
78Ga0308206_11823941
79Ga0308200_10046453
80Ga0308200_10051782
81Ga0308200_10981111
82Ga0308190_10050682
83Ga0308190_10083793
84Ga0308190_10444792
85Ga0308189_100065784
86Ga0308189_100083642
87Ga0308189_100110333
88Ga0308189_100120263
89Ga0308189_100192671
90Ga0308189_100331801
91Ga0308189_102256351
92Ga0308189_104371331
93Ga0308201_100279902
94Ga0308201_100598421
95Ga0308204_100022854
96Ga0308204_100065042
97Ga0308197_100051463
98Ga0308197_100495482
99Ga0308197_102272151
100Ga0308199_11751612
101Ga0308187_100901952
102Ga0308187_101590183
103Ga0308195_10747671
104Ga0315290_105382763
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 55.09%    β-sheet: 0.00%    Coil/Unstructured: 44.91%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

20406080100120ICRRMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINASKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKAAEPKPAPSSPVDEPTDVTRExtracel.Cytopl.Sequenceα-helicesβ-strandsCoilSS Conf. scoreDisordered RegionsTM segmentsTopol. domains
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.20
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
31.7%68.3%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Groundwater Sediment
Sediment
Soil
Soil
Soil
Vadose Zone Soil
Tropical Forest Soil
Serpentine Soil
Soil
Soil
Soil
Host-Associated
Avena Fatua Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Miscanthus Rhizosphere
Switchgrass Rhizosphere
Avena Fatua Rhizosphere
Switchgrass, Maize And Mischanthus Litter
3.8%3.8%36.5%3.8%21.2%14.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FWIRA_073860902124908009SoilMAELRRELVHDIQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINASKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAAT
2PV_044052702170459014Switchgrass, Maize And Mischanthus LitterGHTNCGEIAVESEDSVEAICKRMAELRRELICDMQEVSRSAKAMATPSFYIRKFPWATMAVAAGVGYLLIPKKKQVIHPDMKALAELVRKNQVQIKTSKAADESKGMVQSLAVMGITWAAKTGMNYLIHQLTTANSKAKEPTAAPSSPVDEPRR
INPhiseqgaiiFebDRAFT_10564574523300000364SoilVTPEDPAEKIRKRMSELRRELAYDVQDVSRSTKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKKVVHPDMEALAELVRKNQVNINTSKAEESQGAVKALAVMALSWAAKAGMNYLLQQMTTVAKAKAPREAPSSPVDEPSDVKR*
INPhiseqgaiiFebDRAFT_10564623733300000364SoilVRSVLPTDRATMRSCAVDPDEPVEKICRRMAELRRELAYDMQDVSRSAKAMATPSFYIRRFPWATLAVAAGVGYTLIPKKKQVVQPDMKALAELVRKNQVNINTSKSAETQGMVKSLAVMGLSWAAKAGMNYVIQQMTAASKAKSPHAAPSSPVDEPANAKR*
C688J35102_11854853413300002568SoilAVDAPLDCTAVTECTVDTDESVDQICRRMAELRRELVYDMQDVSRSAKAMASPSFYMRKFPWATLAVAAGVGYLLIPKKKHVVHPDMEALAELVRKNQVKINTAKASEESMLKTVALMALSWVAKAGTNYLVQQMTTRAAQAVKSPRAAPSSPVDEPTNVKR*
Ga0007419J51692_111290313300003571Avena Fatua RhizosphereDESVDKICRRMAELRRELVYDMQDVSRSAKAMASPSFYMRKFPWATLAVAAGLGYLLIPKKKHVVQPDMEALAELVRKNQVKIDTAKASEESMMKTVGLMALSWAAKAGMNYFVQQMTTRAAQAGKSDGAAPSSPVDERTNVKR*
Ga0062593_10074184413300004114SoilVSADEPAENICRRMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQIIKPDMEALAELVRKNQVNINAPKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKAAEPKPAPSSPVDEPTDVTR*
Ga0063455_10014335613300004153SoilLDERRAVDAPLDCTAVTECTVDTDESVDQICRRMAELRRELVYDMQDVSRSAKAMASPSFYMRKFPWATLAVAAGVGYLLIPKKKHVVHPDMEALAELVRKNQVKINTAKASEESMLKTVALMALSWVAKAGTNYLVQQMTTRAAQAVKSPRAAPSSPVDEPTNVKR*
Ga0062590_10094859213300004157SoilVADESADKICERMAALRRELTHDVEDVTRSAKAMASPSFYLKKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELIRKNQMNINPAKTAEESQGMVKTLAVMGLTWAARAGMNYIIQQLTTVATKAAEPKPAPSSPVDEPTDVTG*
Ga0062590_10131449323300004157SoilSAAIGRSCDDRSYTVSADEPAENICRRMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINASKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKAAEPKPAPSSPVDEPTDVTR*KYGCTN*
Ga0062591_10164098113300004643SoilMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAAAGYMLIPKKKQIIKPDMEALAELVRKNQVNINASKPAEESQGIVKTLAVMGLSWAAKAGMNYIVQQLTTAAT
Ga0058860_1219213633300004801Host-AssociatedVDETWSLSVADEAADDICKRMAFLRRELTHDVEDVTRSAKAMASPSFYVRRFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELIRKNQLNINPAKAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTVAQKAAEPKPAPSSPVDEPTDVTDVTG*
Ga0070665_10240784213300005548Switchgrass RhizosphereDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELIRKNQMNINPAKAEETQGVVKTLAVMGLTWAAKAGMNYVIQQLTTVATKAAEPTPAPSSPVDEPTGVTDVTDVTG*
Ga0068866_1129458213300005718Miscanthus RhizosphereAIGRSCDDRSYTVSADEPAENICRRMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINASKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKAAEPKPAPSSPVDEPTDVTR*
Ga0068860_10141007223300005843Switchgrass RhizosphereDDRSYTVSADEPAEKICRRMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINSKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKAAEPKPAPSSPVDEPTDVTR*
Ga0105245_1260315413300009098Miscanthus RhizosphereMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATRAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINSKAAEESQGMVKTLAVMGLTWAAKAGMNYVVQQLTTAATKAAEPRPAPTSPV
Ga0105249_1224164523300009553Switchgrass RhizosphereMAELRRELTHDVEDVTRSAKAMASPSYYVKKFPWATLAVAAGVGYMLIPKKKHVIKPDMEALAELIRKNHGNINTMKAAEESQGMVKTLAVMGLTWAAKAGMNYIVGQITTAATKASAPRATEPNSTPSPAPSSPVDEPT
Ga0126311_1144172123300010045Serpentine SoilAELRSELACDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYLLIPKKKQVVQPDMEALAELVRKNQVNINTTKASSQDSKGVLGSLAVMGLSWAARAGMNYVMQQMTTAATTKAKAAPKPAPSSPVDEPTDVKR*
Ga0126382_1216597413300010047Tropical Forest SoilMANSDESAEEIRKRMAELRRELVCDVQDVTRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKQVIRPDMETLAELVRKNQVNINTSKAAEESQGMLQTLAVMGLSYAAKAGMNYLIQQLTTNAAKAQQ
Ga0126319_163135723300010147SoilKRMSELRRELVYDVQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYVLVPKKKKVVHPDMEALAELVRKNQVNINTSKAEESQGAVKALAVMALTWAAKAGMNYLIQQMTTASKPKAPAAAPSSPVDEPTDVKR*
Ga0127503_1063663823300010154SoilRNCRAVGRTGRSHENAEMNVDPDDEVEKIRKRMSELRRELAHDVQDVSRSAKAMASPSFYIRKFPWATLAVAAGLGYMLIPKKKKVVHPDMEALADLVRKNQVNINTSKAEESQGAVKALAVMALSWAAKAGMYYLLQQMTTASKPKAPRAAPSSPVDEPTDVKR*
Ga0127503_1095631833300010154SoilMAELRRELIHDMQDVSRSAEAMTSPSYYIRKFPWATLALAAGVGYMLIPKKKQVVYPDMEALAELVRKNQVNFNASKATEESQGVVKTLAVMGLTWAAKAGMNYVIQQLTTAASKAMEPKETPSSPVDEPTDVTG*
Ga0126317_1103290923300011332SoilVDETWSLSVADEAADDICKRMAFLRRELTHDVEDVTRSAKAMASPSFYVRKFPWATLAVAAGVGYMLIPKKKQVIKPDMEALAELIRKNQMNINPAKAEETQGVVKTLAVMGLTWAAKAGMNYVIQQLTTVATKAAEPTPAPSSPVDEPTGVTDVTDVTG*
Ga0137364_1063752223300012198Vadose Zone SoilMAELRRELAYDMQDVSRSAKAMASPSFYVRKFPWATLAVAAGVGYLLIPKKKQVVQPDMKELADLVRKNQVNINTSKAAEESQGMVKTLAVMGLSWGAKAGMNYLIHQMTTPKAKAPHAAPSSPVDEPTDVKR*
Ga0150985_10106257633300012212Avena Fatua RhizosphereMMTTEDPAETIRRRMAELRRELTHDVQDVTRSAKAMASPSFYVRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINSSKATEESQGMVKTLAVMGLSYAAKAGMNYIIQQLTTAAAKSGESKPAPSSPVDEPTDVTR*
Ga0150985_10113573533300012212Avena Fatua RhizosphereMAELRRELAYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKQVVQPDMEALAELVRKNQVNINTSKAAEESKGMMKSLAIMGLSWAAKAGMNYVVQQMTTASKATSAGAAPSSPVDEPTDVKR*
Ga0150985_10147338553300012212Avena Fatua RhizosphereMKSLCDRLLMADRPPAESPVSPDEPAEKICKRMAELRRELVHDMQDVSRSAKAMASPSFYVRKFPWATLAIAAGVGYVLIPKKKHVIKPDMAELAELVRKNQININASKAAEEQQGMVKTLAMMGLTWAAKAGMNYVVQQMTTAATKAKESNPAPSSPVDEPTDVTG*
Ga0150985_10326908333300012212Avena Fatua RhizosphereMAELRRELIHDVQDVTRSAKAMASPSFYMRKFPWATLAIAAGVGYMLIPKKKQVVHPDMEALAELVRKNQVQINTAKASEESQGMVKTLVVMGLTYAAKAGMNYVFQQLATAAKAEPKPAPSSPVDEPTDVTG*
Ga0150985_10331163843300012212Avena Fatua RhizosphereMAELRRELVYDMQDVSRSAKAMASPAFYIRKFPWATMAVAAGVGYMLIPKKKQVLQPDMEALAEMVRKNQVNINTSKAAEDSRGMVKTLVVMGLSWAAKTGMNYLVQQMTTPAAKTRSSKAAPSSPVDEPTNVKR*
Ga0150985_10429359923300012212Avena Fatua RhizosphereMAELRRELIHDVQDVTRSAKAMASPSFYVRKFPWATLAIAAGVGYMLIPKKKQVVHPDMEALAELVRKNQVHINTAKASEESQGIVKTLAVMGLTYAAKAGMNYVFQQLATAAKAEPKPAPSSPVDEPTDVTG*
Ga0150985_10572528313300012212Avena Fatua RhizosphereMSYMISPEDPAEVIRRRMAELRRELTHDVQDVTRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIQPDMEALAELVRKNQVHINASKATEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAAKKAAEPKPAPSSPVVDEPSDVTG*
Ga0150985_10590137743300012212Avena Fatua RhizosphereLGCTAVTECTVDTDESVDKICRRMAELRRELVYDMQDVSRSAKAMASPSFYMRKFPWATLAVAAGLGYLLIPKKKHVVQPDMEALAELVRKNQVKIDTAKASEESMMKTVGLMALSWAAKAGMNYFVQQMTTRAAQAGKSDGAAPSSPVDERTNVKR*
Ga0150985_10997670513300012212Avena Fatua RhizosphereDEPAEKICKRMAELRHELAYDVQDVSRSAKAMASPSFYIRKFPWATMAVAAGVGYMLIPKKKQVIQPDMNALAELVRKNQVNISTSKAATDSKGAMSSLVVMGLSWAAKAGMNYLMQQMTTASPKAKSPAPSSPVDEPTNVKR*
Ga0150985_11105641223300012212Avena Fatua RhizosphereMVDSDDEVEKIRKRMSELRRELVYDVQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYALVPRKKKVVHPDMEALAELVRKNQVNINTSKAEESQGAVKALAAMALSWGAKAGMNYLLQQMTTASKPKATRGAPSSPVDEPTDVKR*
Ga0150985_11140990113300012212Avena Fatua RhizosphereMEFAVDTDESVEKICRRMAELRRELVYDMQDVSRSAKAMASPSFYMRKFPWATLAVAAGVGYLLIPKKKQVVHPDMKALAELVRKNQVKINTAKASEESMMKTVALMGLSWVAKAGTNYLVQQMTTRAARAKSPGAAPSSPVDEPTNVKR
Ga0150985_11142553913300012212Avena Fatua RhizosphereMAELRRELAYDVQDVSRSAKAMASPSFYIRKFPWATIAVAAGVGYLVIPKKKQVIQPDMNTLAELVRKNQVNINTSKAATDSKGALGSLAVMALTWGAKAGMNYLMQQMTTASAKAKSPAPSSPVDEPTNVKR*
Ga0150985_11171696753300012212Avena Fatua RhizosphereVDADESVEKICKRMAELRRELVYDMQDVSRSAKAIASPSFYIRKFPWATLAVAAGLGYMLVPKKKHVVQPDMEALAELVRKNQVKINTSKASDESMLKTAAVMGLSWAAKVGMNYLVQQMTTRAAQAGKSAGAAPSSPVDEPTNVKR*
Ga0150985_11295353713300012212Avena Fatua RhizosphereRELTHDVEDVTRSAKAMASPSFYVRKFPWATLAVAAGVGYMLIPKKKQVIKPDMEALAELIRKNQMHINPAKAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTVATKAAESRPAPSSPVDEPTDVTG*
Ga0150985_11468324923300012212Avena Fatua RhizosphereMAELRRELACDMQEVSRSAKAMASPSFFIRKFPWATMAVAAGVGYLLIPKKKQVIQPDMEALAELVRKNQVHINASKSAQESQGMFKTVAVMGLSWAARTGMKYLMQQLTTATPGAKEPKATATSPIDEPTNVKR*
Ga0150985_11537807233300012212Avena Fatua RhizosphereMAELRRELVYDMQDVSRSAKAMASPAFYIRKFPWATMAVAAGVGYMLIPKKKQVLKPDMEALAELVRKNQVNINTSKAAEDSRGMVKTLLVMGLSWAAKTGMNYLVQQMTSPAAKTRSSKAAPSSPVDEPSDVKR*
Ga0150985_11583252533300012212Avena Fatua RhizosphereMAQLRRELTHDVEDVARSAKAMASPSYYVRKFPWATLAVAAGMGYLLIPKKKQVIKPDMEALAELIRKNQVNVNTGKVAEESQGMVKTLAVMGLTWAAKAGMNYIIQQVTTAATNATEPKSKPSPTPSSPVDEPTDVQR*
Ga0150985_11633235033300012212Avena Fatua RhizosphereMAELRRELAHDVQDVTRSAKAMASPSFYVRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVHINTAKASEESQGMVKTLAVMGLSWAAKAGMNYMIQQLTTAAAKSAGPKPAPSSPVDEPTDVTR*
Ga0150985_11931900413300012212Avena Fatua RhizosphereLRGARSKTVSPEEPAEEICKRMAELRRELVHDMQEVSRSAKAMASPAFYVRKFPWATLAVAAGVGYMLIPKKKQQVMQPDMEALAELMRKNHVDVNASQAKDSPGMIKTLAAMGLTWAAKAGMNYVIQQATTAATKAMDPAQAPSSPVDEPTDVTG*
Ga0150985_12027470823300012212Avena Fatua RhizosphereMKARLGCITITGCAVDADEPVEKICKRMAELRRELVYDMQDVSRSAKAMASPAFYIRKFPWATMAVAAGVGYMLIPKKKQVLQPDMEALAEMVRKNQVNINTSKAAEDSRGMVKTLVVMGLSWAAKTGMNYLVQQMTTPAAKTRSSKAAPSS
Ga0150985_12089836433300012212Avena Fatua RhizosphereMSDMSNSEDTAETICRRMAELRRELTHDFQDVTRSAKAMASPSFYVRKFPWATLAIAAGVGYMFIPKKKQVIQPDMEALAELVRKNQVHINASKASEESQGMVKTLAVMGLSWAAKAGMNYVIQQLTTAATKAEKAKPAPSSPVDEPSDVTG*
Ga0150984_10038350623300012469Avena Fatua RhizosphereMASLRRDLTHDVEDVARSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIQPDMAALAEMVRKNQVHINASKATEESQGVVKTLAVMGLSWAAKAGMNYVIQQLTTAAAKSAQPKPAPSSPVDEPTDVTR*
Ga0150984_10328784033300012469Avena Fatua RhizosphereMAELRRELACDMQEVSRSAKAMASPSFFIRKFPWATMAVAAGVGYLLIPKKKQVIQPDMEALAELVRKNQVHINASKPAQESQGMFKTVAVMGLSWAARTGMKYLMQQLTTATPGAKEPKATATSPIDEPTNVKR*
Ga0150984_10335943733300012469Avena Fatua RhizosphereMSYMISPEDPAEVIRRRMAELRRELTHDVQDVTRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIQPDMEALAELVRKNQVHINASKATEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAAKKAAEPKPAPSSPVDEPSDVTG*
Ga0150984_10498883423300012469Avena Fatua RhizosphereMAELRRELVYDMQDVSRSAKAMASPAFYIRKFPWATMAVAAGVGYMLIPKKKQVLQPDMEALAELVRKNQVNINTSKAAEDSRGMVKTLVVMGLSWAAKTGMNYLVQQMTSPAAKTRSSKAAPSSPVDEPTDVKR*
Ga0150984_10513267033300012469Avena Fatua RhizosphereVDSDEPAEKICKRMAELRHELAYDVQDVSRSAKAMASPSFYIRKFPWATMAVAAGVGYMLIPKKKQVIQPDMNALAELVRKNQVNISTSKAATDSKGAMSSLVVMGLSWAAKAGMNYLMQQMTTASPKAKSPAPSSPVDEPTNVKR*
Ga0150984_10558387023300012469Avena Fatua RhizosphereMKSLCDRLLMADRPPAESPVSPDEPAEKICKRMAELRRELVHDMQDVSRSAKAMASPSFYVRKFPWATLAIAAGVGYVLIPKKKHVIKPDMAELAELVRKNQININASKAAEEQQGMVKTLAMMGLTWAAKAGMNYVVQ
Ga0150984_10595754623300012469Avena Fatua RhizosphereVDADESVEKICKRMAELRRELVYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGLGYMMVPKKKHVVQPDMEALAELVRKNQVKINTSKASDESMLKTAAVMGLSWAAKVGMNYLVQQMTTRAAQAGKSAGAAPSSPVDEPTNVKR*
Ga0150984_10888635033300012469Avena Fatua RhizosphereMAELRRELSHDVAEVTRSAKAMASPSFYVRKFPWATLAIAAGVGYILIPKKKQVIKPDMEALAELVRKNQVHINASKAADESQGMVKTLAVMGLSWAAKAGMNYVVQQLTTAAAKAKEPKPAPSSPVDAPTDVAR*
Ga0150984_11375335613300012469Avena Fatua RhizosphereHDVQDVARSAKAMASPSFYVRKFPWATLAVAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVHINASKATEESQGMVKSLAVMGLTWGAKAGMNYVLRQLTTAASKTAETKRAPSSPVDEPTDVTG*
Ga0150984_11387016513300012469Avena Fatua RhizosphereMAELRRELTHDVEDVTRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVVQPDMEALAELVRKNQVQINTSKAADESQGIVKTLAVMGLSWAAKAGMNYVIQQLTTASAKAAEPTPAPSSPVDEPTDVTG*
Ga0150984_11668896713300012469Avena Fatua RhizosphereRRELICDMQEVSRSAKAMAKPSFYVRKFPWATMAVAAGVGYLLIPKKKQVIHPDMKALAELVRKNQVQIKTSKTAHESKGMMQSLAGMGITWAAKTGMNYVIQQLTTANSKAKEPTTAPSSPVDEPTKVRR*
Ga0150984_11748657533300012469Avena Fatua RhizosphereMAELRRELVYDMQDVSRSAKAMASPSFYMRKFPWATLAVAAGLGYLLIPKKKHVVQPDMEALAELVRKNQVKIDTAKASEESMMKTVGLMALSWAAKAGMNYFVQQMTTRAAQAGKSDGAAPSSPVDERTNVKR*
Ga0150984_11872249123300012469Avena Fatua RhizosphereVADETADEICKRMASLRRELTHDVEDVTRSAKAMASPSFYVRKFPWATLAVAAGVGYMLIPKKKQVIKPDMEALAELIRKNQMHINPAKAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTVATKAAESRPAPSSPVDEPTDVTG*
Ga0150984_11880056013300012469Avena Fatua RhizosphereMADRPPAESPVSPDEPAEKICKRMAELRRELVHDVQDVTRSAKAMASPSFYVRKFPWATLAIAAGVGYMLIPKKKHVIKPDMAELAELVRKNQINIDASKAAEEQPGMVKTLAMMGLTWAAKAGMNYVVQQMTTAATKAKESNRAPSSPVDEPTDVTG*
Ga0150984_12170909233300012469Avena Fatua RhizosphereMAELRRELAYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKHVVQPDMEALAELVRKNQVNINTSKAAEESKGMIKSLAIMGLSWAAKAGMNYVVQQMTTASKATSAGAAPSSPVDEPTDVKR*
Ga0164301_1161378613300012960SoilDVQDVSRSAKAMASPSFYIRKFPWATLTVAAGVGYMLIPKKKKVVHPDMEALAELVRKNQVNINTSKAEESQGAVKALAVMALSWAAKAGMNYLLQQMTTASKPKAPRTAPSSPVDEPSDVKR*
Ga0164302_1063600523300012961SoilVDTDEPAEKICMRMAELRRELVYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKKVVHPDMEALAELVRKNQVNINTSKAEESQGAAKALAVMALSWAAKAGMNYLLQQMTTASKPKAPRAAPSSPVDEPTDVKR*
Ga0164302_1088165423300012961SoilMAELRRELVHDMPDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINASKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAAAKAAEPKPAPSSPVDEPTDVTR*
Ga0164304_1116482813300012986SoilEENENVVRSAAIGRSCDDRSYTVSADEPAEKICRRMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINASKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKAAEPKPAPSSPVDEPTDVTR*
Ga0164305_1023076613300012989SoilICRRMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINASKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKAAEPKPAPSSPVDEPTDVTR*
Ga0190272_1085874513300018429SoilRMAELRRELIHDVQDVTRSAKAMASPSFYIRKFPWATLAIAAGLGYMLIPKKKQIIKPDMEALAELVRKNQVHINASKATEESPGMVKTLAVMGLTWAARAGMNYVVQQLTTAASKAAEQKQAPSSPVDEPSDVTG
Ga0184647_112315813300019263Groundwater SedimentAELRRELTHDVQDVTRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVHINAAKATEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAAAKAVEPKPAPSSPVDEPTDVTR
Ga0184644_162424213300019269Groundwater SedimentVTEESAEDICKRMAFLRRELTHDVEDVTRSAKAMASPSFYVRKFPWATLAIAAGVGYMLTPKKKQVIKPDMEALAELVRKNQVHINASKATEESQGMVKTLAVMGLTWAAKAGMNYVIQQVTMAATKPAELKPAPSSPVDEPTDVTG
Ga0184642_113983333300019279Groundwater SedimentVDPDEPVEKICRRMAELRRELAYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKQVVQPDMDALAELVRKNQVNINTSKAAQESQGMVKTLAVMGLSWAAKAGMNYAIQQMTTAAAKPASKAAPSSPVDEPANVKR
Ga0222625_131941633300022195Groundwater SedimentVDTDEPAEKICMRMAELRRELVYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKQVVQPDMEALAELVRKNQVNINTTKAAEPSQGMMASLAVMGLSWAAKAGLNYVVQQMTTAASKKKNPNAAPSSPVDEPTDVKR
Ga0207641_1236392323300026088Switchgrass RhizosphereMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINSKAAEESQGMVKTLAVMGLTWAAKAGMNYVVQQLTTAATKAAEPRPAPTSPVDEPTDVTR
Ga0308203_101840533300030829SoilVDPDEPVERICRRMAELRRELAYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKQVVQPDMKALAELVRKNQVNISTTKAAETQGMVKSLAVMGLTWAAKAGMNYVVQQMTTAASAAKSPNAAPSSPVDEPANVKR
Ga0308202_101219413300030902SoilVSPEDPAETITRRMAELRRELTLDVEDVTRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKRQVIQPDMEALAELVRKNQVQINTSQATEESQGMVKTLAVMGLSWAAKAGMHYVVQQLTSAAAKSPEPKPAPSSPVDEPSDVTG
Ga0308202_102015723300030902SoilMAELRRELAYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKQVVQPDMKALAELVRKNQVNISTTKAAETQGMVKSLAVMGLTWAVKAGMNYVVQQMTTAASAAKSPNAAPSSPVDEPANVKR
Ga0308202_103444823300030902SoilMSYMISPEDPAEVIRRRMAELRSELTHDVQDVTRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIQPDMEALAELVRKNQVHINASKATEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKAAEPKPAPSSPVDEPSDVTG
Ga0308202_109817723300030902SoilVDTDEPAEKICMRMAELRRELVYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKQVVQPDMEALAELVRKNQVNINTTKAAEPSQGMMASLAVMGLSWAAKAGLNYVVQQMTTAASKKKNPNAAPSSPV
Ga0308206_106056223300030903SoilMSYMISPEEPAEAIRRRMAELRRELTHDVEDVTRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVHINASKATEESQGMVKTLAVMGLTWAAKAGVNYVIQQLTTAAAKAAEPKPAPSSPVDEPTDVTR
Ga0308206_118239413300030903SoilRMAELRRELVYDMQDVSRSAKAMTSPAFYIRKFPWATLLVAAGLGYLLIPKKKQVVQPDMKALAELVRKNQVKINTSKASEESMMKTAGVMALSWAAKAGMNYLVQQMTARAAQATSPGRAPSSPVDEPTNVKR
Ga0308200_100464533300030905SoilVSPEDPAETITRRMAELRRELTHDVEDVTRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKRQVIQPDMEALAELVRKNQVQINTSKATEESQGMVKTLAVMGLSWAAKAGMNYVVQQLTSAAAKSPEPKPAPSSPVDEPSDVTG
Ga0308200_100517823300030905SoilVDSDDEVEKIRKRMSELRRELVYDVQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYALVPKKKKVVHPDMEALAELVRKNQVNINTSKAEESQGAVKALAVMALSWAAKAGMNYLLQQMTTASKPKAPKAAPSSPVDEPTDVKR
Ga0308200_109811113300030905SoilVSADEPAEKICRRMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVNINASKAAEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKA
Ga0308190_100506823300030993SoilMAELRRELVYDMQEVSRSAKAMASPSFYIRKFPWATLLVAAGLGYVLIPKKKQVVHPDMDALAELVRKNQVKINTSKASEESMMKTVAVMGLSWAAKAGMNYLVQQMTTRAAQAKSPGRAPSSPVDEPTNVKR
Ga0308190_100837933300030993SoilVSPEDPAETITRRMAELRRELTHDVEDVTRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKRQVIQPDMEALAELVRKNQVQINTSQATEESQGMVKTLAVMGLSWAAKAGMNYVVQQLTSAAAKSPEPKPAPSSPVDEPSDVTG
Ga0308190_104447923300030993SoilVVDAPLDCTTVTECTVDADESVDKICRRMAELRRELVFDMQDVSRSTKAMTSPSFYIRKFPWATLAVAAGLGYLLIPKKKQFVQPDMKALAELVRKNQVKINTSKASEESMMKTLAVMGLSWVAKAGTNYLVQQMTTRAARAKSPGAAPSSPVDEPTSVKR
Ga0308189_1000657843300031058SoilVVDAPLDCTTVTECTVDADESVDKICRRMAELRRELVFDMQDVSRSTKAMTSPSFYMRKFPWATLAVVAGLGYLLIPKKKQFVQPDMKALAELVRKNQVKINTSKASEESMMKTLAVMGLSWVSKAGTNYLVQQMTTRAARAKSPGAAPSSPVDEPTSVKR
Ga0308189_1000836423300031058SoilVSPEDPAETITRRMAELRRELTHDVEDVTRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKQVIQPDMAALAELVRKNQVQINTSQATEESQGMVKTLAVMGLSWAAKAGMNYVVQQLTSAAAKSPEPKPAPSSPVDEPSDVTG
Ga0308189_1001103333300031058SoilMVDSDDEVEKIRKRMSELRRELAYDVQDVSRSAKAMASPSFYIRKFPWATLAVAAGMGYMLIPKKKKVVHPDMEALAELVRKNQVNINTSKAEESQGAMKALAMMAMSWGAKAGMNYLLQQMTTASKPKAPASAPSSPVDEPTDVKR
Ga0308189_1001202633300031058SoilVDTDESVDKICKRMAELRRELVYDMQDVSRSAKAMTSPAFYIRKFPWATLLVAAGLGYLLIPKKKQVVQPDMKALAELVRKNQVKINTSKASEESMMKTAGVMALSWAAKAGMNYLVQQMTARAAQATSPGRAPSSPVDEPTNVKR
Ga0308189_1001926713300031058SoilMSSEDPAEMICRRMAELRSELTHDVQDVTRSAKAMTSPLFYVRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVHINASKATEESQGMVKTLAVMGLTWAAKAGMNYVLQQLTTAATKAAEPSPSPSSPVDEPTDVTG
Ga0308189_1003318013300031058SoilMEYYRLLLEKRRAVGARLDRAAATECTVDTDESVDKICKRMAELRRELVYDMQEVSRSAKAMASPSFYIRKFPWATLLVAAGLGYVLIPKKKQVVHPDMDALAELVRKNQVKINTSKASEESMMKTVAVMGLSWAAKAGMNYLVQQMTTRAAQAKSPGRAPSSPVDEPTNVKR
Ga0308189_1022563513300031058SoilMWSCTVTPEDPAEKIRKRMSELRRELAYDVQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYILVPKKKKVVHPDMEALAELVRKNQVNINTSKAEESQGAVKALAVMALSWAAKAGMNYLLQQMTTVAKAKAPRKAPSSPVDEPTDVKR
Ga0308189_1043713313300031058SoilMSYMISPEDPAEVIRRRMAELRRELTHDVQDVTRSAKAMTSPSFYIRKFPWATLAIATGVGYMLIPKKKQVIQPDMEALAELVRKNQVHINASKATEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAAVK
Ga0308201_1002799023300031091SoilVVDAPLDCTTVTECTVDADESVDKICRRMAELRRELVFDMQDVSRSTKAMTSPSFYMRKFPWATLAVAAGLGYLLIPKKKQFVQPDMKALAELVRKNQVKINTSKASEESMMKTLAVMGLSWVAKAGTNYLVQQMTTRAAQAKSPGAAPSSPVDEPTNVKR
Ga0308201_1005984213300031091SoilMSYMISPEDPAEVIRRRMAELRRELTHDVQDVTRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIQPDMEALAELVRKNQVHINASKATEESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTAATKAAEPKPAPSSPVDEPSDVTG
Ga0308204_1000228543300031092SoilMVTECTVDTDESVDKICKRMAELRRELVYDMQDVSRSAKAMTSPAFYIRKFPWATLLVAAGLGYLLIPKKKQVVQPDMKALAELVRKNQVKINTSKASEESMMKTAGVMALSWAAKAGMNYLVQQMTARAAQATSPGRAPSSPVDEPTNVKR
Ga0308204_1000650423300031092SoilVDTDEPAEKICKRMAELRRELAFDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYKLIPKKKQVVQPDMEALAKLVRKNQVNINTSKAAEQSQGMIASLAVMGLSWAAKAGLNYVVQQMTTAASKKKNPNAAPSSPVEPTDVKR
Ga0308197_1000514633300031093SoilVDPDEPVEKICRRMAELRRELAYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKQVVQPDMDALAELVRKNQVNINTSKAAQESQGMVKTLAVMGLSWAAKAGMNYAIQQMTTAAAKPASKAAPSSPVDEPSNVKR
Ga0308197_1004954823300031093SoilVSADEPAEKICRRMAELRRELVHDMQDVSRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQVQINTSQATEESQGMVKTLAVMGLSWAAKAGMNYVVQQLTSAAAKSPEPKPAPSSPVDEPSDVTG
Ga0308197_1022721513300031093SoilMAFLRRELTHDVEDVTRSAKAMASPSFYVRKFPWATLAIAAGVGYMLIPKKKQVIKPDMEALAELVRKNQININAAKAADESQGMVKTLAVMGLTWAAKAGMNYVIQQLTTVATKAAEPK
Ga0308199_117516123300031094SoilCTVTPEDPAEKIRKRMSELRRELAYDVQDVSRSAKAMASASFYIRKFPWATLAVAAGVGYMLVPKKKKVVHPDMEALAELVRKNQVNINTSKAEESQGAVKALAVMALSWAAKAGMNYLLQQMTTVSKPKAPRAAPSSPVDEPTDVKR
Ga0308187_1009019523300031114SoilVDTDEPAEKICMRMAELRRELVYDMQDVSRSAKAMASPSFYIRKFPWATLAVAAGVGYMLIPKKKQVVQPDMEALAKLVRKNQVNINTSKAAEQSQGMIASLAVMGLSWAAKAGLNYVVQQMTTAASKKKNPNAAPSSPVDEPTDVKR
Ga0308187_1015901833300031114SoilELRREIVYDMQDVSRSAKAMTSPAIYIRKFPWATLLDAAGLGYLLIPKKKQVVQPDMKALAELVRKNQVKINTSKASEESMMKTAGVMALSWAAKAGMNYLVQQMTARAAQSTSPGRAPSSPVDEPTNVKR
Ga0308195_107476713300031123SoilRRRMAELRRELTHDVQDVTRSAKAMASPSFYIRKFPWATLAIAAGVGYMLIPKKKQVIQPDMEALAELVRKNQVHINAAKATEESQGMVKTLAVMGLTWAAKAGMNYVVQQLTTAATKAAEPKPAPSSPVDEPSDVTG
Ga0315290_1053827633300031834SedimentMTSPSYYVRKFPWATLAVAAGVGYMLIPKKKQSVTPDMQALAELIKNNHGRGTAQQAAQESPGMVKTLAVMGLSWAARAGMNYLLQQLTTVATKATAPQPNEQSPSPAKESSNVER


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.