NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F098263

Metagenome Family F098263

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098263
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 59 residues
Representative Sequence MIAIMMCDDCDMQMEEVFTAQENFRLKGWMCPTCLHFAPAIGREKKWTMEDKDGDQEGRG
Number of Associated Samples 67
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 86.54 %
% of genes near scaffold ends (potentially truncated) 32.69 %
% of genes from short scaffolds (< 2000 bps) 79.81 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction Yes
3D model pTM-score0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (41.346 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(44.231 % of family members)
Environment Ontology (ENVO) Unclassified
(54.808 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(56.731 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 15.91%    Coil/Unstructured: 84.09%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.47
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF11753DUF3310 43.27
PF05766NinG 11.54
PF14090HTH_39 4.81
PF12850Metallophos_2 3.85
PF00959Phage_lysozyme 1.92
PF04851ResIII 0.96
PF13479AAA_24 0.96
PF13385Laminin_G_3 0.96
PF09588YqaJ 0.96
PF13936HTH_38 0.96
PF11351GTA_holin_3TM 0.96
PF13443HTH_26 0.96



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.65 %
UnclassifiedrootN/A41.35 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2022920000|QLn_FQAYR3Y02TN7MBNot Available515Open in IMG/M
3300000949|BBAY94_10018561Not Available1942Open in IMG/M
3300000973|BBAY93_10132305Not Available630Open in IMG/M
3300001419|JGI11705J14877_10061260All Organisms → Viruses → Predicted Viral1233Open in IMG/M
3300001748|JGI11772J19994_1007656All Organisms → Viruses → Predicted Viral1957Open in IMG/M
3300001748|JGI11772J19994_1034655Not Available646Open in IMG/M
3300001963|GOS2229_1011978All Organisms → Viruses → Predicted Viral1782Open in IMG/M
3300004941|Ga0068514_1005511All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1294Open in IMG/M
3300004941|Ga0068514_1014055All Organisms → cellular organisms → Bacteria → Proteobacteria862Open in IMG/M
3300004941|Ga0068514_1050105Not Available512Open in IMG/M
3300005346|Ga0074242_10444612Not Available25329Open in IMG/M
3300005346|Ga0074242_10741075All Organisms → cellular organisms → Bacteria → Proteobacteria866Open in IMG/M
3300005512|Ga0074648_1004932Not Available10451Open in IMG/M
3300005589|Ga0070729_10313518All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas881Open in IMG/M
3300005611|Ga0074647_1004320All Organisms → Viruses → Predicted Viral3657Open in IMG/M
3300005611|Ga0074647_1009517All Organisms → Viruses → Predicted Viral1896Open in IMG/M
3300005613|Ga0074649_1009793Not Available6932Open in IMG/M
3300005613|Ga0074649_1024435All Organisms → cellular organisms → Bacteria → Proteobacteria3270Open in IMG/M
3300005613|Ga0074649_1025092All Organisms → Viruses → Predicted Viral3195Open in IMG/M
3300005613|Ga0074649_1041050All Organisms → Viruses → Predicted Viral2138Open in IMG/M
3300006802|Ga0070749_10086614All Organisms → Viruses → Predicted Viral1865Open in IMG/M
3300006802|Ga0070749_10102310All Organisms → Viruses → Predicted Viral1693Open in IMG/M
3300006802|Ga0070749_10187256All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300006802|Ga0070749_10245513Not Available1015Open in IMG/M
3300006802|Ga0070749_10582914All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria604Open in IMG/M
3300006802|Ga0070749_10675326Not Available553Open in IMG/M
3300006810|Ga0070754_10491064Not Available529Open in IMG/M
3300006869|Ga0075477_10022113All Organisms → Viruses → Predicted Viral2945Open in IMG/M
3300006916|Ga0070750_10015371Not Available3953Open in IMG/M
3300006919|Ga0070746_10129015Not Available1244Open in IMG/M
3300006919|Ga0070746_10360561All Organisms → cellular organisms → Bacteria → Proteobacteria657Open in IMG/M
3300007234|Ga0075460_10257016Not Available581Open in IMG/M
3300007234|Ga0075460_10302330Not Available525Open in IMG/M
3300007344|Ga0070745_1175695All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300007345|Ga0070752_1349533Not Available555Open in IMG/M
3300007540|Ga0099847_1009880All Organisms → cellular organisms → Bacteria → Proteobacteria3157Open in IMG/M
3300007540|Ga0099847_1056744All Organisms → Viruses → Predicted Viral1225Open in IMG/M
3300007541|Ga0099848_1020794All Organisms → Viruses → Predicted Viral2800Open in IMG/M
3300007541|Ga0099848_1136245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium917Open in IMG/M
3300007960|Ga0099850_1135612Not Available998Open in IMG/M
3300008012|Ga0075480_10512280Not Available576Open in IMG/M
3300009000|Ga0102960_1299719All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium567Open in IMG/M
3300009001|Ga0102963_1068449Not Available1459Open in IMG/M
3300009001|Ga0102963_1258913Not Available688Open in IMG/M
3300009506|Ga0118657_12556009All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon575Open in IMG/M
3300009509|Ga0123573_10231107All Organisms → Viruses → Predicted Viral1813Open in IMG/M
3300009509|Ga0123573_10416504All Organisms → Viruses → Predicted Viral1286Open in IMG/M
3300009509|Ga0123573_10968301Not Available795Open in IMG/M
3300009509|Ga0123573_11292147All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon680Open in IMG/M
3300010297|Ga0129345_1005244All Organisms → cellular organisms → Bacteria → Proteobacteria5004Open in IMG/M
3300010316|Ga0136655_1034950Not Available1614Open in IMG/M
3300010316|Ga0136655_1187032All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon616Open in IMG/M
3300010368|Ga0129324_10295378Not Available638Open in IMG/M
3300010413|Ga0136851_11812367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium585Open in IMG/M
3300010430|Ga0118733_100035996All Organisms → cellular organisms → Bacteria10770Open in IMG/M
3300010430|Ga0118733_104745648All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas722Open in IMG/M
3300011258|Ga0151677_1124467Not Available544Open in IMG/M
3300017963|Ga0180437_10215336All Organisms → Viruses → Predicted Viral1501Open in IMG/M
3300017963|Ga0180437_10600659All Organisms → cellular organisms → Bacteria → Proteobacteria804Open in IMG/M
3300017987|Ga0180431_10665143Not Available708Open in IMG/M
3300017987|Ga0180431_10705204All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon682Open in IMG/M
3300017990|Ga0180436_11113951All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon601Open in IMG/M
3300017991|Ga0180434_10595916All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria843Open in IMG/M
3300018080|Ga0180433_10780472All Organisms → cellular organisms → Bacteria → Proteobacteria706Open in IMG/M
3300018080|Ga0180433_10829628All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon681Open in IMG/M
3300018415|Ga0181559_10636316All Organisms → cellular organisms → Bacteria574Open in IMG/M
3300018420|Ga0181563_10407142All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium775Open in IMG/M
3300021964|Ga0222719_10000712Not Available33210Open in IMG/M
3300022053|Ga0212030_1014511Not Available1016Open in IMG/M
3300022168|Ga0212027_1054019Not Available500Open in IMG/M
3300022169|Ga0196903_1039402Not Available551Open in IMG/M
3300022176|Ga0212031_1041816Not Available761Open in IMG/M
3300022187|Ga0196899_1055351Not Available1285Open in IMG/M
3300022198|Ga0196905_1004027Not Available5305Open in IMG/M
3300022198|Ga0196905_1030120All Organisms → Viruses → Predicted Viral1634Open in IMG/M
3300022198|Ga0196905_1163684All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium568Open in IMG/M
3300022200|Ga0196901_1106155All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas975Open in IMG/M
3300022200|Ga0196901_1225517Not Available591Open in IMG/M
3300024262|Ga0210003_1296241All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300025646|Ga0208161_1091251All Organisms → cellular organisms → Bacteria → Proteobacteria859Open in IMG/M
3300025647|Ga0208160_1026626All Organisms → Viruses → Predicted Viral1780Open in IMG/M
3300025655|Ga0208795_1093495Not Available815Open in IMG/M
3300025671|Ga0208898_1016940All Organisms → Viruses → Predicted Viral3362Open in IMG/M
3300025671|Ga0208898_1039571All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon1819Open in IMG/M
3300025687|Ga0208019_1182999All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon562Open in IMG/M
3300025769|Ga0208767_1036051All Organisms → Viruses → Predicted Viral2478Open in IMG/M
3300025818|Ga0208542_1168530All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon584Open in IMG/M
3300025889|Ga0208644_1021954All Organisms → Viruses → Predicted Viral4005Open in IMG/M
3300025889|Ga0208644_1095559All Organisms → Viruses → Predicted Viral1477Open in IMG/M
3300025889|Ga0208644_1117546All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300025889|Ga0208644_1334744Not Available585Open in IMG/M
3300025889|Ga0208644_1390803All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300026097|Ga0209953_1026479Not Available960Open in IMG/M
3300027828|Ga0209692_10001457Not Available32193Open in IMG/M
3300027828|Ga0209692_10296531Not Available714Open in IMG/M
3300027917|Ga0209536_100810921All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300029302|Ga0135227_1043955Not Available534Open in IMG/M
3300029632|Ga0135266_100033All Organisms → Viruses → Predicted Viral2477Open in IMG/M
3300029632|Ga0135266_109588Not Available660Open in IMG/M
3300031578|Ga0307376_10833800Not Available567Open in IMG/M
3300031669|Ga0307375_10325612Not Available977Open in IMG/M
3300031673|Ga0307377_10216725All Organisms → Viruses → Predicted Viral1482Open in IMG/M
3300034374|Ga0348335_007022Not Available6692Open in IMG/M
3300034374|Ga0348335_078842All Organisms → cellular organisms → Bacteria1118Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous44.23%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment7.69%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment6.73%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment4.81%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment4.81%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.85%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water3.85%
Marine WaterEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Water2.88%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor2.88%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment2.88%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil2.88%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh1.92%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment1.92%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface1.92%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.96%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.96%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.96%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.96%
Mangrove SedimentEnvironmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment0.96%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.96%
Saline WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2022920000Saline water microbial communities from Qinghai Lake, Tibetan Plateau - High mountain lake (unassembled)EnvironmentalOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300000973Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY93Host-AssociatedOpen in IMG/M
3300001419Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)EnvironmentalOpen in IMG/M
3300001748Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)EnvironmentalOpen in IMG/M
3300001963Marine microbial communities from Nags Head, North Carolina, USA - GS013EnvironmentalOpen in IMG/M
3300004941Marine water microbial communities from the Pohang Bay, Korea with extracellular vesicles - Pohang-0.2umEnvironmentalOpen in IMG/M
3300005346Saline sediment microbial community from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005589Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2EnvironmentalOpen in IMG/M
3300005611Saline surface water microbial communities from Etoliko Lagoon, GreeceEnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009506Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8EnvironmentalOpen in IMG/M
3300009509Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11EnvironmentalOpen in IMG/M
3300010297Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNAEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010413Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9EnvironmentalOpen in IMG/M
3300010430Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samplesEnvironmentalOpen in IMG/M
3300011258Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeateEnvironmentalOpen in IMG/M
3300017963Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_D_1 metaGEnvironmentalOpen in IMG/M
3300017987Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_MS_1 metaGEnvironmentalOpen in IMG/M
3300017990Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_3_S_2 metaGEnvironmentalOpen in IMG/M
3300017991Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_2 metaGEnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018415Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018420Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011512CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022168Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)EnvironmentalOpen in IMG/M
3300022169Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026097Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027828Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300029302Marine harbor viral communities from the Indian Ocean - SRB3EnvironmentalOpen in IMG/M
3300029632Marine harbor viral communities from the Pacific Ocean - SMB3EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
QL_na_12196202022920000Saline WaterDCDTQMQEALRIGNFKLKGWVCPSCLHFAKAIGRERQLTIEXKKMXKERRVTSGSQT
BBAY94_1001856163300000949Macroalgal SurfaceMIAIMICDDCNQQMTEIFTASENFKLKGWMCEACLNFAPAIGREKTWTMEDKDGDQEGCVRQVVQ*
BBAY93_1013230523300000973Macroalgal SurfaceMVCDDCDQQMTEIFTASENFRLKGWMCEACFQFAPAIGREKKLTLDDKDETNGHTPRCS*
JGI11705J14877_1006126053300001419Saline Water And SedimentVIAIMMCDDCDVQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERLFTIEDKQDDKKRSV
JGI11772J19994_100765643300001748Saline Water And SedimentVIAIMMCDDCDVQMQEVFTAQENFKLNGWVCPSCLHFAKAIGRERLFTIEDKQDDKKRSV
JGI11772J19994_103465513300001748Saline Water And SedimentMCDDCDVQMQEVFTASENFRLKGWVCPSCLHFAKAIGRERLFTIEDKQDDKKRSV
GOS2229_101197813300001963MarineVIAIMICDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENGNKTRSV*
Ga0068514_100551133300004941Marine WaterMIAIMICDDCNQQMTEIFTATENFRLKGWMCEGCLTFAPAIGREKKWTMEDKDGDTKGCSGQMVQ*
Ga0068514_101405523300004941Marine WaterMIAIMICDDCDQQMTEIFTASENFRLKGWMCEACLNFAPAIGREKTWTMEDKDGDQEGCVRQTLQ*
Ga0068514_105010513300004941Marine WaterMIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLTFAPAVGREKKWTMEDKDGDTQGCSGQMVQ*
Ga0074242_10444612163300005346Saline Water And SedimentVIAIMICDDCDEQMQEVFTASENFKTQGLECVSPVYTSSPAIGRERGYTKNDFEEKDKNDSRAC*
Ga0074242_1074107523300005346Saline Water And SedimentMIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLIFAPAVGREKKWTMEDKDGDQEGCVRQTLQ*
Ga0074648_1004932223300005512Saline Water And SedimentMIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLIFAPAIGREKKWTMEDKDGDTQGRSGQMVQ*
Ga0070729_1031351813300005589Marine SedimentMIAIMVCDDCDQQMTEVFNASENRLKGWMCESCLEFVPAIGRERNYKMD
Ga0074647_100432013300005611Saline Water And SedimentVIAIMMCDDCDVQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERLFTIE
Ga0074647_100951713300005611Saline Water And SedimentVIAIMMCDDCDVQMQEVFTAQENFKLNGWVCPSCLHFAKAIGRERLFTIE
Ga0074649_100979323300005613Saline Water And SedimentMIAIMVCDDCNQQMTEIFTATENFRLKGWMCEGCLTFAPAVGREKKWTMEDKDGDTQGRSGQVVQ*
Ga0074649_102443573300005613Saline Water And SedimentMIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLTFAPAVGREKKWTMEDKDGDTQGRSGQMVQ*
Ga0074649_102509263300005613Saline Water And SedimentMIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLTFAPAVGREKKWTMEDKDGDTQGCSGQVVQ*
Ga0074649_104105013300005613Saline Water And SedimentVIAIMMCDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIKDKKDDKKRSV
Ga0070749_1008661433300006802AqueousMIALMICDDCNQQMTEVFTAQENFKLKGWMCESCFHFAPAIGRENKWTLEDKDGDQEGRSGQVV*
Ga0070749_1010231013300006802AqueousVIAIMMCDDCDTQMQEVFTAQENFRLNGWVCPICLHFAKAIGRERQLTIEDKKDDKKRGV
Ga0070749_1018725613300006802AqueousICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRG*
Ga0070749_1024551313300006802AqueousMIAIMMCDDCDAQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTED
Ga0070749_1058291423300006802AqueousVIAIMMCDDCDVQMQEVFTASENFRLKGWMCESCLHFAKAIGRERQLTIEDKKDDKKRSV
Ga0070749_1067532623300006802AqueousMIAIMMCDECDMQMEEVFTAQENFKLKGWMCPTCLHFAPAIGREKQWTMEDKDGDQKGRC
Ga0070754_1049106413300006810AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDKDGDQEGRSGQVV*
Ga0075477_1002211373300006869AqueousVIAIMMCDDCDTQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENGNKTRSV*
Ga0070750_1001537123300006916AqueousMIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDDSRPR
Ga0070746_1012901523300006919AqueousMIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDDSRP
Ga0070746_1036056133300006919AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREK
Ga0075460_1025701613300007234AqueousMICDECNTQMEEVFTAQEDFRLKGWMCPSCFHFAEAIGRERLYKKGDDDGDQTGSV*
Ga0075460_1030233013300007234AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFTPAIGREKKWTMEDKDGDSKIDSGQMV*
Ga0070745_117569523300007344AqueousMIAIMMCDDCDTQMEEVFTAQENFKLKGWMCPSCLHFAPAIGRERGFTIEDKAKTEDDRRAS*
Ga0070752_134953313300007345AqueousRKGDSKMIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDKDGDQEGRSGQVV*
Ga0099847_100988023300007540AqueousMIAIMMCDDCDMQMEEVFTAQENFKLKGWICPSCLHFAPAIGRERGFTIEDKAKTEDDRRVG*
Ga0099847_105674423300007540AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDRDG
Ga0099848_102079463300007541AqueousMICDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKKDDKKRGV*
Ga0099848_113624523300007541AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDKDGDQEGRSGQVVQ*
Ga0099850_113561223300007960AqueousMCDDCDTQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIEDKKDDKKRGV*
Ga0075480_1051228013300008012AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRSGQVV*
Ga0102960_129971923300009000Pond WaterMIAIMMCDDCDVQMEEVFSAEHNFHLKGWLCPQCRHFAPTIGREKWFTMDDKDDRNQTDDSR*
Ga0102963_106844923300009001Pond WaterMIAIMMCDDCDMQMEEVFTAQENFRLKGWMCPTCLHFAPAIGREKKWTMEDKDGDQEGRG
Ga0102963_125891323300009001Pond WaterMIALMICDDCNQQMTEVFTAQENFKLKGWMCESCFHFAPAIGREKKWTMEDRDGDQEGRS
Ga0118657_1255600923300009506Mangrove SedimentGMIAIMMCDDCDTQMEEVFTAQENFKLKGWMCPSCMHFAPAIGREKGWTINDQTQTENDSRAS*
Ga0123573_1023110753300009509Mangrove SedimentMIALMICDDCNQQMTEIFTASENFKLKGWMCESCFHFAPAIGRENKFTMEDKDGDSKGRSGQVV*
Ga0123573_1041650423300009509Mangrove SedimentMIALMICDDCNQQMTEIFTAQNDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQKGRSGQVVQ*
Ga0123573_1096830113300009509Mangrove SedimentMICDDCDQQMTEIFTASENFRLKGWMCEACLNFAPAIGREKTWTMEDKDGDQEGCVRQTLQ*
Ga0123573_1129214723300009509Mangrove SedimentMIAIMMCDDCDTQMEEVFTAQENFKLKGWMCPSCMHFAPAIGREKGWTINDQTQTENDSRAS*
Ga0129345_100524483300010297Freshwater To Marine Saline GradientMICDDCNTQMEEVFTAQEDFRLKGWMCPSCFHFAEAIGRERLYKKGDDDGDQTGSV*
Ga0136655_103495013300010316Freshwater To Marine Saline GradientMIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTME
Ga0136655_118703213300010316Freshwater To Marine Saline GradientNVIAIMMCDDCDTQMQEVFTAQENFRLKGWLCPSCLHFAPAIGRERGFTKDDFEEKED*
Ga0129324_1029537823300010368Freshwater To Marine Saline GradientMIAIMMCDDCDTQMEEVFTAQENFKLKGWMCPSCLHFAPAIGRERGFTIEDKAKTEDDRRVG*
Ga0136851_1181236713300010413Mangrove SedimentMIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDK
Ga0118733_100035996243300010430Marine SedimentMIAIMVCDDCDQQMTEVFNASENRLKGWMCESCLEFVPAIGRER
Ga0118733_10474564833300010430Marine SedimentMVCDDCDTQMEEIFTAQENFKLKGWMCPSCLNFAPAIGREKKWQLDDKERRDGDKA
Ga0151677_112446723300011258MarineMCDDCDVQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIKDKKDDKKRSV*
Ga0180437_1021533633300017963Hypersaline Lake SedimentVIAIMMCDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENDK
Ga0180437_1060065933300017963Hypersaline Lake SedimentVIAIMMCDDCDTQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENGN
Ga0180431_1066514323300017987Hypersaline Lake SedimentVIAIMMCDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENDKKRSV
Ga0180431_1070520413300017987Hypersaline Lake SedimentAIMMCDDCDVQMQEVFTASENFKLKGWLCESCLHFAPAIGRERGLTKDDFEEKNKDDSRA
Ga0180436_1111395113300017990Hypersaline Lake SedimentRSGNVIAIMMCDDCDVQMQEVFTASENFKLKGWMCESCLHFSPAIGRERGFTKDDFEEKNKDDSRAG
Ga0180434_1059591633300017991Hypersaline Lake SedimentMIAIMMCDDCDVQMQEVFTAQENFKLNGWVCPSCLHFAKAIGRERQFTIEDKESDKKRSV
Ga0180433_1078047213300018080Hypersaline Lake SedimentVIAIMMCDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTI
Ga0180433_1082962823300018080Hypersaline Lake SedimentVIAIMMCDDCDVQMQEVFTASENFKLKGWMCESCLHFSPAIGRERGFTKDDFEEKNKDDSRAG
Ga0181559_1063631623300018415Salt MarshMIAIMMCDDCDMQMEEVFTAQENMRLKGWMCPTCLHFAPAIGRERGWTVDDKAKDDSRSG
Ga0181563_1040714223300018420Salt MarshMIAIMMCDDCDMQMEEVFTAQENFKLKGWMCPTCLHFAPAIGREKKWTMEDKDGDQKGRG
Ga0222719_10000712133300021964Estuarine WaterMIALMICEECNNQMTEIFTAQEDMKLKGWMCESCLTFVPAIGREKKFTIEDQAPQRSE
Ga0212030_101451123300022053AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDRDGDQEGRS
Ga0212027_105401913300022168AqueousVIAIMMCDDCDTQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENGIYLFL
Ga0196903_103940233300022169AqueousVIAIMICDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDK
Ga0212031_104181623300022176AqueousMIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDV
Ga0196899_105535123300022187AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRC
Ga0196905_1004027123300022198AqueousMIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDDSRPC
Ga0196905_103012033300022198AqueousMIALMICDDCNTQMEEVFTAQEDFRLKGWMCPSCFHFAEAIGRERLYKKGDDDGDQTGSV
Ga0196905_116368413300022198AqueousMIALMICDDCNQQMTEVFTAQENFKLKGWMCEGCFHFAPAIGRENKWTLEDK
Ga0196901_110615513300022200AqueousVIAIMMCDDCDTQMQEVFTAQENFRLKGWVCPSCLHFAKAIGRERQLTIEDKADD
Ga0196901_122551733300022200AqueousVIAIMICDDCDTQMQEVFTAQENFRLKGWVCPSCLHFAKAIGRERQLTIK
Ga0210003_129624123300024262Deep SubsurfaceVIAIMICDDCDVQMQEVFTASENFKLKGWMCESCLHFAPAIGRERGYTKDDFEEKNKDDSRAG
Ga0208161_109125113300025646AqueousMIALMICDDCNQQMTEVFTAQENFKLKGWMCEGCFHFAPAIGRENKWTLEDKDGDQEGRG
Ga0208160_102662643300025647AqueousVIAIMICDDCDVQMQEVFTASENFRLNGWVCPSCLHFAKAIGRERQLTIEDKKDDKKRGV
Ga0208795_109349523300025655AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRSGQVVQ
Ga0208898_101694023300025671AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDKDGDQEGRSGQVV
Ga0208898_103957143300025671AqueousMIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFTPAIGRERLFTQNDKKEDDSRPC
Ga0208019_118299913300025687AqueousRNPQNDSEAEMIAIMMCDDCDVQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDDSRPC
Ga0208767_103605143300025769AqueousVIAIMMCDDCDTQMQEVFTAQEDFRLKGWMCPSCFHFAEAIGRERLYKKEDDDGDQTGSV
Ga0208542_116853023300025818AqueousMIAIMMCDDCDAQMEEVFKAQDDFRLKGWVCTSCLHFTPAIGRERLFTQNDKTEDDSRSS
Ga0208644_102195493300025889AqueousMIAIMMCDDCDAQMEEVFKAQDDFRLKGWVCTSCLNFTPAIGRERLFTQNDKTEDDSRPR
Ga0208644_109555913300025889AqueousMIALMICDDCNQQMTEIFTAQDNFKLKGWMCESCFHFAPAIGRENKWTLEDK
Ga0208644_111754643300025889AqueousMIALMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRG
Ga0208644_133474423300025889AqueousVIAIMICDDCDVQMQEVFTASENFKLKGWMCESCLHFAPAIGRERGYTKDDFEEKNKDDSRAS
Ga0208644_139080323300025889AqueousMIAIMMCDECDTQMEEVFKAQDDFRLKGWVCTSCLHFAPAIGRERLFTQNDKTEDDIRPR
Ga0209953_102647943300026097Pond WaterVIATMTCDDCNEPMQTVFTAQENFRLKGWMCPSCLCFTPAIGREHKFTIEDEENGDQK
Ga0209692_10001457203300027828Marine SedimentMIAIMVCDDCDTQMEEIFTAQENFKLKGWMCPVCLNFAPAIGREKKWQLDDKERRDGDKA
Ga0209692_1029653123300027828Marine SedimentVIAIMVCDDCDTQMEEIFTAQENFKLKGWMCPSCLNFAPAIGREKKWQLDDKEKRDGDKA
Ga0209536_10081092123300027917Marine SedimentMIALMICDDCNQQMTEIFTAQDDFRLKGWMCEGCFHFAPAIGREKKWTMEDKDGDQEGRG
Ga0135227_104395513300029302Marine HarborMIAIMICDDCNQQMTEIFTASENFRLKGWMCEACFNFAPAIGREKTWTMEDKDGDQEGCSRQVVQ
Ga0135266_10003323300029632Marine HarborMIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLTFAPAVGREKKWTMEDKDGDTQGRSGQMVQ
Ga0135266_10958833300029632Marine HarborMIAIMVCDDCNQQMTEIFTATENFKLKGWMCEGCLTFAPAVGREKKWTMEDKDGDQEGCVRQALQ
Ga0307376_1083380023300031578SoilVIAIMICDDCDVQMQEIFTASQNFRLKGWMCESCLHFAPAIGRERGYSKDDFEEKDKDDSWAS
Ga0307375_1032561233300031669SoilVIAIMICDDCDVQMQEVFTASENFKLKGWMCESCLHFAPAIGRERGYTKDDFEEKNKDDSRVG
Ga0307377_1021672513300031673SoilVIAIMICDDCDVQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIEDKQDD
Ga0348335_007022_1827_20003300034374AqueousMMCDDCDTQMQEVFTAQENFRLNGWVCPSCLHFAKAIGRERQLTIEDKENGNKTRSV
Ga0348335_078842_920_10903300034374AqueousMICDDCNQQMTEIFTAQDDFRLKGWMCESCFHFAPAIGREKKWTMEDKDGDQEGRC


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