NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F098255

Metagenome Family F098255

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F098255
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 110 residues
Representative Sequence VLVIPGQSREALGIELMPIALVYITLSALATFRAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG
Number of Associated Samples 86
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 21.15 %
% of genes near scaffold ends (potentially truncated) 75.00 %
% of genes from short scaffolds (< 2000 bps) 84.62 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (51.923 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(17.308 % of family members)
Environment Ontology (ENVO) Unclassified
(24.038 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.885 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 69.40%    β-sheet: 0.00%    Coil/Unstructured: 30.60%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF01904DUF72 7.69
PF02574S-methyl_trans 3.85
PF00903Glyoxalase 2.88
PF13231PMT_2 1.92
PF04237YjbR 1.92
PF13632Glyco_trans_2_3 1.92
PF13520AA_permease_2 1.92
PF12681Glyoxalase_2 1.92
PF14023DUF4239 1.92
PF13396PLDc_N 1.92
PF04185Phosphoesterase 0.96
PF13442Cytochrome_CBB3 0.96
PF07883Cupin_2 0.96
PF01872RibD_C 0.96
PF14534DUF4440 0.96
PF02683DsbD 0.96
PF00877NLPC_P60 0.96
PF00211Guanylate_cyc 0.96
PF12680SnoaL_2 0.96
PF04138GtrA 0.96
PF08281Sigma70_r4_2 0.96
PF13519VWA_2 0.96
PF13561adh_short_C2 0.96
PF02649GCHY-1 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 7.69
COG0646Methionine synthase I (cobalamin-dependent), methyltransferase domainAmino acid transport and metabolism [E] 3.85
COG2040Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)Amino acid transport and metabolism [E] 3.85
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 1.92
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.96
COG0791Cell wall-associated hydrolase, NlpC_P60 familyCell wall/membrane/envelope biogenesis [M] 0.96
COG1469GTP cyclohydrolase FolE2Coenzyme transport and metabolism [H] 0.96
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.96
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.96
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 0.96


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A51.92 %
All OrganismsrootAll Organisms48.08 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0906999All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria636Open in IMG/M
3300000837|AP72_2010_repI_A100DRAFT_1030597All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium755Open in IMG/M
3300000890|JGI11643J12802_10005212All Organisms → cellular organisms → Bacteria791Open in IMG/M
3300000890|JGI11643J12802_10418046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1318Open in IMG/M
3300000953|JGI11615J12901_11222373Not Available679Open in IMG/M
3300000956|JGI10216J12902_115988021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium tusciae551Open in IMG/M
3300001431|F14TB_100670017Not Available566Open in IMG/M
3300004157|Ga0062590_102919151Not Available512Open in IMG/M
3300004643|Ga0062591_101560055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales663Open in IMG/M
3300005093|Ga0062594_100357034Not Available1152Open in IMG/M
3300005093|Ga0062594_102879726Not Available536Open in IMG/M
3300005332|Ga0066388_100521407All Organisms → cellular organisms → Bacteria1822Open in IMG/M
3300005332|Ga0066388_107268973Not Available556Open in IMG/M
3300005332|Ga0066388_107835877Not Available535Open in IMG/M
3300005337|Ga0070682_100081991Not Available2090Open in IMG/M
3300005340|Ga0070689_101896746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus544Open in IMG/M
3300005353|Ga0070669_100708947All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300005455|Ga0070663_102126681All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus506Open in IMG/M
3300005456|Ga0070678_100719144Not Available901Open in IMG/M
3300005543|Ga0070672_100534812Not Available1016Open in IMG/M
3300005544|Ga0070686_101385604Not Available590Open in IMG/M
3300005615|Ga0070702_100050619All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2374Open in IMG/M
3300005617|Ga0068859_100593115Not Available1201Open in IMG/M
3300005713|Ga0066905_101201105All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria678Open in IMG/M
3300005764|Ga0066903_102173276All Organisms → cellular organisms → Bacteria → Terrabacteria group1070Open in IMG/M
3300005764|Ga0066903_102204529All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300005764|Ga0066903_102359390Not Available1028Open in IMG/M
3300005764|Ga0066903_102852249Not Available938Open in IMG/M
3300005764|Ga0066903_103151774All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300005764|Ga0066903_108611109Not Available519Open in IMG/M
3300006048|Ga0075363_100340498All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria875Open in IMG/M
3300006049|Ga0075417_10213618All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria917Open in IMG/M
3300006058|Ga0075432_10080330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1181Open in IMG/M
3300006844|Ga0075428_100111026All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2987Open in IMG/M
3300006845|Ga0075421_102525680Not Available535Open in IMG/M
3300006847|Ga0075431_100043076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4657Open in IMG/M
3300006852|Ga0075433_10238735All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium1613Open in IMG/M
3300006880|Ga0075429_101131676Not Available684Open in IMG/M
3300006903|Ga0075426_10067355Not Available2558Open in IMG/M
3300009094|Ga0111539_10337061All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium1755Open in IMG/M
3300009100|Ga0075418_10037922All Organisms → cellular organisms → Bacteria5213Open in IMG/M
3300009100|Ga0075418_10668072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1119Open in IMG/M
3300009101|Ga0105247_10007518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6678Open in IMG/M
3300009156|Ga0111538_14133854Not Available501Open in IMG/M
3300009162|Ga0075423_10795600Not Available1000Open in IMG/M
3300009162|Ga0075423_11281067Not Available783Open in IMG/M
3300009177|Ga0105248_10214150All Organisms → cellular organisms → Bacteria2170Open in IMG/M
3300010043|Ga0126380_11821513Not Available551Open in IMG/M
3300010048|Ga0126373_10626444All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1130Open in IMG/M
3300010360|Ga0126372_11329884All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300010362|Ga0126377_13181959Not Available530Open in IMG/M
3300010366|Ga0126379_11045933All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium922Open in IMG/M
3300010366|Ga0126379_12062725Not Available672Open in IMG/M
3300010371|Ga0134125_10548463Not Available1279Open in IMG/M
3300010373|Ga0134128_11090993Not Available881Open in IMG/M
3300010403|Ga0134123_11670217Not Available687Open in IMG/M
3300012502|Ga0157347_1028745Not Available687Open in IMG/M
3300012913|Ga0157298_10067682Not Available878Open in IMG/M
3300012957|Ga0164303_11148178Not Available564Open in IMG/M
3300012958|Ga0164299_10271784All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300012960|Ga0164301_10472296Not Available897Open in IMG/M
3300012961|Ga0164302_10200836All Organisms → cellular organisms → Bacteria1226Open in IMG/M
3300012971|Ga0126369_12862514Not Available565Open in IMG/M
3300012988|Ga0164306_11168026Not Available644Open in IMG/M
3300012989|Ga0164305_10621090Not Available871Open in IMG/M
3300013297|Ga0157378_11984720Not Available632Open in IMG/M
3300013308|Ga0157375_11998081Not Available689Open in IMG/M
3300014968|Ga0157379_10035806All Organisms → cellular organisms → Bacteria4426Open in IMG/M
3300015077|Ga0173483_10622044Not Available597Open in IMG/M
3300015371|Ga0132258_10153388All Organisms → cellular organisms → Bacteria5529Open in IMG/M
3300015371|Ga0132258_11524108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1688Open in IMG/M
3300015371|Ga0132258_11911711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1494Open in IMG/M
3300015371|Ga0132258_13219454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1126Open in IMG/M
3300015372|Ga0132256_100331710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium1612Open in IMG/M
3300015372|Ga0132256_100965814All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria968Open in IMG/M
3300015373|Ga0132257_100128034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium2956Open in IMG/M
3300015373|Ga0132257_102488506Not Available672Open in IMG/M
3300015374|Ga0132255_100678014All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium1529Open in IMG/M
3300016387|Ga0182040_11967779Not Available502Open in IMG/M
3300019356|Ga0173481_10515761Not Available612Open in IMG/M
3300019361|Ga0173482_10101929Not Available1044Open in IMG/M
3300025901|Ga0207688_10004937All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria7261Open in IMG/M
3300025916|Ga0207663_10272282All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300025923|Ga0207681_10685674Not Available851Open in IMG/M
3300025934|Ga0207686_10651113Not Available833Open in IMG/M
3300025935|Ga0207709_11536100Not Available553Open in IMG/M
3300025937|Ga0207669_11946577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus502Open in IMG/M
3300025938|Ga0207704_11891882All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300025939|Ga0207665_10050348All Organisms → cellular organisms → Bacteria2801Open in IMG/M
3300026023|Ga0207677_11108377Not Available722Open in IMG/M
3300026067|Ga0207678_10643077Not Available931Open in IMG/M
3300026089|Ga0207648_10772591Not Available893Open in IMG/M
3300026121|Ga0207683_10077162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2950Open in IMG/M
3300027873|Ga0209814_10082903Not Available1353Open in IMG/M
3300027907|Ga0207428_10029233All Organisms → cellular organisms → Bacteria4571Open in IMG/M
3300027909|Ga0209382_10121904All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3040Open in IMG/M
3300027909|Ga0209382_11843867Not Available587Open in IMG/M
3300031740|Ga0307468_102520356Not Available504Open in IMG/M
3300031799|Ga0318565_10658701Not Available502Open in IMG/M
3300031835|Ga0318517_10460254Not Available574Open in IMG/M
3300031890|Ga0306925_12034715Not Available541Open in IMG/M
3300031940|Ga0310901_10586928Not Available509Open in IMG/M
3300031947|Ga0310909_10209234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1623Open in IMG/M
3300032043|Ga0318556_10284828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria864Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere17.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil9.62%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.73%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere6.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.88%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.88%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.92%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.92%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.92%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.92%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.92%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.96%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.96%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.96%
Arabidopsis RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000837Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100EnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006048Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012502Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610Host-AssociatedOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031799Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032043Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_090699912228664021SoilPIALVYISLSALATSRATRSPRGVSRDRLARFFFGELSAGLIFAXGLGLXVHALGGAYLVAAGVVLGVLSAMLAIWMLFLGLGFEQREG
AP72_2010_repI_A100DRAFT_103059723300000837Forest SoilLVYISLSALATFRATRSVRGVSRDRLARFLLGELSAXLIFAGGLGLLVRALGGAYLXSAGIVLGVLSAMLAIWMLFLGLEFERREG*
JGI11643J12802_1000521213300000890SoilREALGIELMPIALAYISLSTLATFRATRSPRGVSRDRLARFFFGELSAGLIFAAGLGLVVHALGGAYLVAAGVVLGVLSAMLAIWMLFLGLGFEQREG*
JGI11643J12802_1041804643300000890SoilLAPFRATHSPRGVSRDRLARFFLGELSAGLIFAGGLGLLVRALGGAYLVAAGVVLGVLSAMLAIWMLFLGLEFERRGG*
JGI11615J12901_1122237323300000953SoilFAASAALVIPGQSREALGIELMPIALVYISLSALATIRATHSERGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVVLGVLSAMLAIWMLFVGLALEQQEG*
JGI10216J12902_11598802113300000956SoilFVVVSIHLRAVVDDPVLRHRAEIILGLLATTLAASAALLIPSQSREVLGLELMPIALVYIALASLATFRATHTPQRISRDRLARFLIGVLSAGLVFAGGLGLLVHALGGAYLVGAGVVLGVLIAMLALWILFVGLAIEQRER*
F14TB_10067001723300001431SoilRRAEIMLGLLATTLAASAALVIPGQSREALGLELMPIALVYISLSALATIRATHSRRGVSRDRLARFFLGELSAGLIFAGGLWLLVHALGGAYLVAAGVVLGVLSAMLAIWMLFVGLGFEQREGEG*
Ga0062590_10291915113300004157SoilVYIGFSTLTTIAATRSQRGISRDRLARFFFGELSAGLIFVGGLGLVIHALGGAYLVAAGIILGVLSSMLAIWSLFVGLGLELEG*
Ga0062591_10156005513300004643SoilLAASAALLIPGQSREALGLELMPIALAYITLSGLATFRATHSPQGISRDRLARFLIGVLSAGLIFTGGLGLLVHALGGAYLVGAGVVLGVLIAMLALWILFVGLGIEEPER*
Ga0062594_10035703433300005093SoilPVLRRRAEIMLGLLATTFAASAALVIPGQGRQALGIELMPIALVYISLSALATFRATRSRRGVSRDRLARFIFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFIGIEFERHPTPKP*
Ga0062594_10287972613300005093SoilMPIALVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEF
Ga0066388_10052140733300005332Tropical Forest SoilVVSLHLDAVVDEPVLRRRAEIMLGLLATTLTASAALLIPGQSRELLGAELMPIALIYISLSGLATFRATQSPRGVSRDRLARFFFGELSAGLIFAGGLGLVVHALGGAYLAAAGIVLGVLSAMLAIWILFVGLGLERRGG*
Ga0066388_10726897313300005332Tropical Forest SoilMAIALIYIGFSTWVTVLATRSSRGVSRDRLVRFILGEFSTGLIFIGGLGLVVHALGGAYLVAAGIVLGVLSSMLATWMLFVGLGVEQQEG*
Ga0066388_10783587713300005332Tropical Forest SoilRRRAEITLGLFATALAASAALLIPGQSRQALGFELMPIALIYISLSTLATVRAIQSSRGVSRDRVARFFFGELSAGLIFVGGLGLVIHAFGGAYLVAAGIVLGVLASMLAIWILFVGLGVELEG*
Ga0070682_10008199153300005337Corn RhizospherePVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPKP*
Ga0070689_10189674613300005340Switchgrass RhizosphereDPVLRRRAEIMLGLLATTFAASAALVIPGQGRQALGIELMPIALVYISLSALATFRATRSRRGVSRDRLARFIFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFIGIEFERHPTPKP*
Ga0070669_10070894723300005353Switchgrass RhizosphereALGIELMPIALVYISLSALATFRATRSRRGVSRDRIARFVFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFVGIEFERHPTPKP*
Ga0070663_10212668113300005455Corn RhizosphereQVVVDDPVLRRRAEIMLGLLATTFAASAALVIPGQGRQALGIELMPIALVYISLSALATFRATRSRRGVSRDRLARFIFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFIGIEFERHPTPKP*
Ga0070678_10071914413300005456Miscanthus RhizosphereQSRQALGIELMPIALVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPRP*
Ga0070672_10053481213300005543Miscanthus RhizosphereFRATRSRRGVSRDRLARFIFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFIGIEFERHPTPKP*
Ga0070686_10138560423300005544Switchgrass RhizosphereMPIALVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPKP*
Ga0070702_10005061943300005615Corn, Switchgrass And Miscanthus RhizosphereVLRRRAEIMLGLLATTFAASAALLIPGQGRQALGIELMPIALVYITLSTLATFRATRSRQGVSRDRLARFLFGDLSAGLIFAGGLGLFVRSLGGAYLVAAGIVLGVLSATLAIWMLFVGLEFERHPTPRP*
Ga0068859_10059311533300005617Switchgrass RhizosphereTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPKP*
Ga0066905_10120110523300005713Tropical Forest SoilLGLLAMTLAASAALLIPSQSREALGLELMPIALVYIALSSLATFRATHSERGVSRDRVARFFIGLLSAGLVFAGGLGLLAHALGGAYLVGAGVVLGVLIAMLALWILFVGLGIEQREL*
Ga0066903_10217327653300005764Tropical Forest SoilELMPIALAYITLSTLATVRAGRSARGVSRDRLARFFFGELSAGLIFVGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWMLFLGLGFEQRDA*
Ga0066903_10220452913300005764Tropical Forest SoilEISLGLFATALAASAALLIPGQSREALGIELMTIALIYVGLSTWATVLATRSSRGVSRDRLVRFIFGEFSAGLIFIGGLGLVVHALGGAYLVAAGIVLGVLSSMLATWMLFVGLGVEQQEG*
Ga0066903_10235939023300005764Tropical Forest SoilSSAVLLIPGQSRQALGIELMPIALIYISLSTLATVRANQSSRGVSRDRLARFFFGELSAVLIFVGGLGLVIHALGGAYLVAAGIVLGVLSSMLAIWILFVGLGVELEG*
Ga0066903_10285224923300005764Tropical Forest SoilEALALELMPIALVYIALSSLATFRATHSQRGVARDRLARFFISELSAGLVFAGGLGLLVHAIGGAYLVGAGVVLGVLIAMLAIWSLFVGLGVEQRNAEQ*
Ga0066903_10315177423300005764Tropical Forest SoilGQSREALGIELMAIALIYIGFSTWATVLATRSSRGVSRDRLVRFILGEFSAVLIFIGGLGLVVHALGGAYLVAAGIVLGVLSSMLATWMLFVGLGVEQQEG*
Ga0066903_10861110913300005764Tropical Forest SoilALAYISLSTLATVRATRSSRGVSRDRLTRYVFGETSAGLIFVGGLGLVIHALGGAYLVAAGIVFGLLSSMLAIWVLFVGLGRELEG*
Ga0075363_10034049823300006048Populus EndosphereLIPGQSREALGLELMPIAIVYIALSSLATFRATHSQQGISRDRLARFVVGVLSAGLIFAGGLGLLVRALGGVYLAGAGIVLGVLIAMLATWMLFVGLGVASRER*
Ga0075417_1021361813300006049Populus RhizosphereRAEILLGLLATTFAASAVLVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0075432_1008033033300006058Populus RhizosphereSAVLVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSPDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWMLFVGLGLEQREG*
Ga0075428_10011102663300006844Populus RhizosphereVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0075421_10252568023300006845Populus RhizosphereALVYIGFSTLTTIAATRSQRGVSRDRLVRFFFGELSAGLIFVGGLGLVIHALGGAYLVAAGIILGVLCSMLAIWSLFVGLGLELER*
Ga0075431_10004307623300006847Populus RhizosphereMPIALVYITLSALATFRAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0075433_1023873553300006852Populus RhizosphereLGCSRRRSALAVLVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSPDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0075429_10113167613300006880Populus RhizosphereQPGPVTGSARAASVSYSRDGCGIRPCGLARLRRRARQRDRGAEITLGLFATALVASAVLLIPGQSRQALGIELMPIALVYIGFSTLTTIAATRSQRGVSRDRLARFFVGELSAGLIFFGGLGLVIHALGGAYLVAAGIILGVLCSMLAIWSLFVGLGLELER*
Ga0075426_1006735533300006903Populus RhizosphereVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSPDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0111539_1033706153300009094Populus RhizosphereLAVLVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0075418_1003792253300009100Populus RhizosphereLGCSRRRSASAVLVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0075418_1066807223300009100Populus RhizosphereLARLRRRARQRDRGAEITLGLFATALVASAVLLIPGQSRQALGIELMPIALVYIGFSTLTTIAATRSQRGVSRDRLARFFVGELSAGLIFFGGLGLVIHALGGAYLVAAGIILGVLCSMLAIWSLFVGLGLELER*
Ga0105247_1000751853300009101Switchgrass RhizosphereMPIAPVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGACLVAAGIILGVLSATLAIWMLFVGLEFERHPTPKP*
Ga0111538_1413385413300009156Populus RhizosphereMLGLLATTLAASAALLIPGQSREALGIELMLIALIYISLSTLATFRATRSPRGVSRDRLVRFLLGELSAGLIFAGGLGLLVHALGGAYLVAAGVVLGVLSAM
Ga0075423_1079560033300009162Populus RhizosphereVLVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSPDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0075423_1128106713300009162Populus RhizosphereMDAAYDPAAWHDFGVALVSASAALLVLVFVVVSIHLRAVSDDPVLLRRAEIMLGLLATTFAASAALVVPGQGREALGIELMPIALVYISLSALATFRAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGASLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0105248_1021415023300009177Switchgrass RhizosphereMPIAPVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPKP*
Ga0126380_1182151313300010043Tropical Forest SoilVVVSLHLKAVVSDSVVRRRAEISLGLFATALVASAALLIPGQSREALGIELMAIALIYIGFSTWATVLATRSSRGVSRDRLVRFILGEFSAVLIFIGGLGLVVHALGGAYLVAAGIVLGVLSSMLATWMLFVGLGVEQQEG*
Ga0126373_1062644433300010048Tropical Forest SoilEALGIELMTIALIYIGLSTWATVLATRSSRGVSRDRLVRFIFGEFSAGLIFIGGLGLVVHALGGAYLVAAGIVLGVLSAMFATWVLFIGLGAEQQ*
Ga0126372_1132988433300010360Tropical Forest SoilAEITLGLFATALLASAALLIPGQSRQALGIELMPIALVYICLSTLATLGATHSSRGVSRDRHVRFVLGELSAGLIFLGGLGLLVHALGGAYLVAAGIVLGVLSAMLAIWMLFLGLGFEQREA*
Ga0126377_1318195913300010362Tropical Forest SoilLKAVVNDSVLRRRAEILLGLFATTLAASAALLIPGQSRQALGVELMSIALIYISLSTLATIVAAHSERGVSRDRLARFVFGELSAGLIFLGGLGLVIHALGGAYLVAAGIVLGVLSAMLAVWILFVGLGLELEG*
Ga0126379_1104593323300010366Tropical Forest SoilGIELMTIALFYVGLSTWATVLATRSSRGVSRDRLVRFIFGEFSAGLIFIGGLGLVVHALGGAYLVAAGIVLGVLSSMLATWMLFVGLGVEQQEG*
Ga0126379_1206272523300010366Tropical Forest SoilYIGLSTWATVLATRSSRGVSRDRLVRFVFGEFSAGLIFIGGLGLVVHALGGAYLVAAGIVLGVLSSMLATWMLFVGLGVEQQEG*
Ga0134125_1054846323300010371Terrestrial SoilLATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPKP*
Ga0134128_1109099323300010373Terrestrial SoilFAASAALLIPGQSRQALGIELMPIALVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPKP*
Ga0134123_1167021723300010403Terrestrial SoilLGLLATTFAASAALVIPGQGRQALGIELMPIALVYISLSALATFRATRSRRGVSRDRLARFIFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFIGIEFERHPTPKP*
Ga0157347_102874533300012502Arabidopsis RhizosphereVSIHLRAVVDDPVLRRRAEIMLGLLATTFAASAALVIPGQSRQALGIELMPIALVYMTLSALATFRATHSRHGVSRDRLARFFFGELSAGLIFAGGLGLLVRTLGGAYLVAAGVVLGVLSAMLAIWMLFVGLALEQREG*
Ga0157298_1006768213300012913SoilALGIELMPIALIYITLSTLATFRATHAAQGVSRDRLARFIIGELSAGLVFAGGLGLLVHALGGAYLVAAGVVLGVLIAMLAIWILFLGLELEQREG*
Ga0164303_1114817813300012957SoilLLATTFAASAALVIPGQGRQALGIELMPIALVYISLSALATFRATRSRRGVSRDRLARFIFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFIGIEFERHPTPKP*
Ga0164299_1027178423300012958SoilLLPIALVYIGCAMLTTITATRSQRGVSRDRLVRFFFGELSAGLIFVGGLGLVVHALGGAYLVAAGIILGVLCSMLAIWSLFVGLGLELEG*
Ga0164301_1047229633300012960SoilLIPGQGREALGIELMPIALVYLTLSTLATVRATRSRQGVSRDRLARFFYGELSAGLIFAGGLGLVVHAFGGAYLVAAGIVLGVLSATLAIWMLFVGLEFERHPSPKP*
Ga0164302_1020083613300012961SoilPIALVYIGFSMLTTITATRSQRGVSRDRLVRFFFGELSAGLIFVGGLGLVIHALGGAYLVAAGIILGVLCSMLAIWSLFVGLGLELEG*
Ga0126369_1286251413300012971Tropical Forest SoilKAVVNDSVLRRRAEISLGLFAAALVASAALLIPGQSREALGIESMAIALIYIGFSTWVTVLATRSSRGVSRDRLVRFILGEFSAGLIFIGGLGLVVHALGGAYLVAAGIVLGVLSSMLATWMLFVGLGVEQQEG*
Ga0164306_1116802613300012988SoilLIPGQGREALGIELMPIALVYLTLSTLATVRATRSRQGVSRDRLARFFFGELSAGLIFACGLGLVVHAFGGAYLVAAGIVLGVLSATLAIWMLFVGLEFERHP
Ga0164305_1062109013300012989SoilTMLAASAALVIPGQSREALGLELMPIALLYVVLSSLVTFRASHSPRGVERDRLARFFLGELSAGLVFAGGLGLVVHALGGAHLVGAGVVLGVLSAMLANWMLFVGLGIERRERERCRASATAT*
Ga0157378_1198472013300013297Miscanthus RhizospherePVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLFVRSLGGAYLVAAGIVLGVLSATLAIWMLFVGLEFERHPTPRP*
Ga0157375_1199808113300013308Miscanthus RhizosphereTFAASAALVIPGQGRQALGIELMPIALVYISLSALATFRATRSRRGVSRDRLARFIFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFIGIEFERHPTPKP*
Ga0157379_1003580623300014968Switchgrass RhizosphereMPIAPVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLPIWMLFVGLEFERHPTPKP*
Ga0173483_1062204413300015077SoilLELMPIALVYIALSSLATFRAIHAPRGVTRDRFVRFFIGELSAGLVFAGGLGLLVHALGGAYLVAAGIVVGVLSAMLAIWILFVGLGIEQRER*
Ga0132258_1015338813300015371Arabidopsis RhizosphereTFAASAVLLIPGQSREALGIELMPIALVYMILSTVATIRATHSERGVSRDRVARFFLGELSAGLIFVGGLGLLIHALGGAYPVAAGIILGVLSAMLAIWTLFVGLGLEQREG*
Ga0132258_1152410813300015371Arabidopsis RhizosphereLRRRAEITLGLFATALVASAVLLIPGQSRQALGIELMPIALVYIGFSTLTTIAATRSQRGVSRDRLARFFFGELSAGLIFVGGLGLVIHALGGAYLAAAGIILGVLCSMLAIWSLFVGLGLELEG*
Ga0132258_1191171133300015371Arabidopsis RhizosphereLGLFATALVASAVLVIPGQSRQALGIELMPIALVYIGFSTLTTIAATRSQRGVSRDRVARFFFGELSAGLIFVGALGLVIHALGGAYLVAAGIILGVLCSMLAIWSLFVGLGLELER*
Ga0132258_1321945433300015371Arabidopsis RhizosphereVLVIPGQSREALGIELMPIALVYITLSALATFRAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0132256_10033171053300015372Arabidopsis RhizosphereLGCSRRRSASAVLVIPGQSREALGIELMPIALVYITLSALATFRAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0132256_10096581413300015372Arabidopsis RhizosphereRRRAEITLGLFATALVASAVLLIPGQSRQALGIELMPIALVYIGFSTLTTIAATRSQRGVSRDRLARFFFGELSAGLIFVGGLGLVIHALGGAYLAAAGIILGVLCSMLAILSLFVGLGLELEG*
Ga0132257_10012803453300015373Arabidopsis RhizosphereLGCSRRRSASAVLVIPGQSREALGIELMPIALVYITLSALATFRAVHSRRGVSRDRLARFFFGELGAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG*
Ga0132257_10248850613300015373Arabidopsis RhizosphereAEIMLGLLATTFAASAALLIPGQSREALGIELMPIALVYMILSTVATIRATHSERGVSRDRVARFFLGELSAGLIFVGGLGLLIHALGGAYPVAAGIILGVLSAMLAIWTLFVGLGLEQREG*
Ga0132255_10067801413300015374Arabidopsis RhizosphereVLVIPGQSREALGIELMPIALVYITLSALATFRAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTL
Ga0182040_1196777913300016387SoilASAALLIPGQSREALGIELMTIALCYVGLSTWATVIATQSSRGVSRDRLVRFIFGEFSACLIFIGGLGLVVHALGGAYLVAAGIVLGVLSAMLATWMLFVGLGAEQQEG
Ga0173481_1051576123300019356SoilMLGLLATTFAASAALLIPGHGREALGIELMPIALVYISLSALATFRATRSPRGVSRDRLARFFVGELSAGLIFAGGLGLLVHALGGAYLVAAGIVLGVLIAMLAIWILFVGLGFEQREG
Ga0173482_1010192943300019361SoilMPIALVYITLSTLATFRATRSRQGVSRDRLTRFFFGELSAGLIFVGGLGLVIHALGGAYLVAAGIILGVLCSMLAIWSLFVGLGLELER
Ga0207688_1000493783300025901Corn, Switchgrass And Miscanthus RhizosphereMSLMPGTTSGSHWSAQALGLLFVVVSIHLRVVVEDPVLRRRAEIMLGLLATTFAASAALVIPGQGRHALGIELMPIALVYMSLSALATFRATRSRRGVSRDRIARFVFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFVGIEFERHPTPKP
Ga0207663_1027228213300025916Corn, Switchgrass And Miscanthus RhizosphereMPIAPVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPKP
Ga0207681_1068567423300025923Switchgrass RhizosphereLMPIALVYMSLSALATFRATRSRRGVSRDRIARFVFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFVGIEFERHPTPKP
Ga0207686_1065111323300025934Miscanthus RhizosphereSAPTAARSCSSPVATTFAASAALLIPGQSRQALGIELMPIALVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPKP
Ga0207709_1153610013300025935Miscanthus RhizosphereRAEIMLGLLATTFAASAALVIPGQGRQALGIELMPIALVYITLSTLATFRATRSRQGVSRDRLARFLFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFVGLEFERHPTPRP
Ga0207669_1194657713300025937Miscanthus RhizosphereVVSLHLKAVVNDSVLRRRAEITLGLFATALVASAVLLIPGQSRQALGIELMPIALVYIGFSTLTTIAATRSQRGVSRDRLTRFFFGELSAGLIFVGGLGLVIHALGGAYLAAAGIILGVLCSMLATWSLFVGLGVELEG
Ga0207704_1189188213300025938Miscanthus RhizosphereSTLTTIAATRSQRGVSRDRLTRFFFGELSAGLIFVGGLGLVIHALGGAYLAAAGIILGVLCSMLATWSLFVGLGVELEG
Ga0207665_1005034853300025939Corn, Switchgrass And Miscanthus RhizosphereMPIALVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPKP
Ga0207677_1110837723300026023Miscanthus RhizosphereALGIELMPIALVYMSLSALATFRATRSRRGVSRDRIARFVFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFVGIEFERHPTPKP
Ga0207678_1064307713300026067Corn RhizosphereIHLQVVVDDPVLRRRAEIMLGLLATTFAASAALVIPGQGRQALGIELMPIALVYISLSALATFRATRSRRGVSRDRLARFIFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFVGLEFERHPTPKP
Ga0207648_1077259123300026089Miscanthus RhizosphereMPIAPVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIVLGVLSATLAIWMLFIGIEFERHPTPKP
Ga0207683_1007716273300026121Miscanthus RhizosphereCSSPVATTFAASAALLIPGQSRQALGIELMPIALVYMTLSALATFRATHSRQGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGIILGVLSATLAIWMLFVGLEFERHPTPRP
Ga0209814_1008290333300027873Populus RhizosphereCLGCSRRRSASAVLVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG
Ga0207428_1002923363300027907Populus RhizosphereVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSRDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG
Ga0209382_1012190463300027909Populus RhizosphereVIPGQSREALGIELMPIALVYITLSALATFCAVHSRRGVSPDRLARFFFGELSAGLIFAGGLGLLVHALGGAYLVAAGVILGVLSAMLAIWTLFVGLGLEQREG
Ga0209382_1184386723300027909Populus RhizosphereLIPGQSREALGIELMPIALVYLVFSTLTTIAATRSQRGVSRDRLARFFVGELSAGLIFVGGLGLVIHALGGAYLVAAGIILGVLCSMLAIWSLFVGLGLELER
Ga0307468_10252035613300031740Hardwood Forest SoilPVLRRRAEIMLGLLATTFAASAALVIPGQGRHALGIELMPIALVYMSLSALATFRATRSRRGVSRDRIARFVFGELSAGLIFAGGLGLVLHALGGAYLVAAGIVLGVLSATLAIWMLFVGIEFERHPTPKP
Ga0318565_1065870113300031799SoilVLRRRAEIGLGLFATALAASAALLIPGQSREALGIELMTIALFYVGLSTWATVLATQSSRGVSRDRLVRFVFGEFSAGLIFIGGLGLVVHALGGAYLVAAGIVLGVLSAMLATWMLFVGLGAEQQEG
Ga0318517_1046025413300031835SoilVSLHLKAVVSDSVVRRRAEISLGLFATALAASAALLIPGQSREALGIELMTIALIYIGLSTWATVLATQSSRGVSRDRLVRFILGEFSAGLIFIGGLGLVLHSLGGAYLVAAGIVLGLLSSMLATWMLFIGLAAEQEEG
Ga0306925_1203471513300031890SoilDAVLRRRAEIVLGLFATALAASAALLIPGQSREALGIELMTIALFYVGLSTWATVLATQSSRGVSRDRLVRFIFGEFSAGLILFGGLGLVVHALGGAYLVGAGIVLGVLSAMLATWMLFVGLGVEQEEG
Ga0310901_1058692823300031940SoilFATALVASAVLLIPGQSRQALGIELMPIALVYIGFSTLTTIAATRSQRGVSRDRLARFFVGELSAGLIFFGGLGLVIHALGGAYLVAAGIILGVLCSMLAIWSLFVGLGLELER
Ga0310909_1020923413300031947SoilEALGIELMPIALVYISLSTLATFSASHSPVGLSRDRLARFLFGELSAGLIFAGGLGLLVHALGGAYLVAAGVVLGVLAAMLAIWMLGLGLGLGLEPE
Ga0318556_1028482823300032043SoilLIPGQSREALGIELMPIALVYISLSTLATFSASHSPVGLSRDRLARFLFGELSAGLIFAGGLGLLVHALGGAYLVAAGVVLGVLAAMLAIWMLGLGLGLGLEPE


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.