Metagenome / Metatranscriptome Family F098253

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098253
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	102 residues
Representative Sequence	MNDNRDEKLDKLLRSRRVEPASPDLAQRIIFKARQSPQTKTMPLWQSVRELFGEFHLPKPAYVLAGALVFGIVIGFSAPQDTGPAADDSGVSVQSFLSADEALL
Number of Associated Samples	87
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.58 %
% of genes near scaffold ends (potentially truncated)	22.12 %
% of genes from short scaffolds (< 2000 bps)	68.27 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (24.038 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (29.808 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.27% β-sheet: 0.00% Coil/Unstructured: 47.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF08281	Sigma70_r4_2	47.12
PF13801	Metal_resist	33.65
PF02738	MoCoBD_1	3.85
PF00171	Aldedh	1.92
PF13533	Biotin_lipoyl_2	1.92
PF16576	HlyD_D23	1.92
PF01138	RNase_PH	0.96
PF12704	MacB_PCD	0.96
PF08379	Bact_transglu_N	0.96
PF00487	FA_desaturase	0.96
PF02325	YGGT	0.96
PF01168	Ala_racemase_N	0.96
PF01315	Ald_Xan_dh_C	0.96
PF00529	CusB_dom_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	1.92
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	1.92
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	1.92
COG0689	Ribonuclease PH	Translation, ribosomal structure and biogenesis [J]	0.96
COG0762	Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT family	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1185	Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase)	Translation, ribosomal structure and biogenesis [J]	0.96
COG1305	Transglutaminase-like enzyme, putative cysteine protease	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.96
COG2123	Exosome complex RNA-binding protein Rrp42, RNase PH superfamily	Intracellular trafficking, secretion, and vesicular transport [U]	0.96
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	92.31 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	60.58 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	60.58 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	60.58 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	60.58 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1221442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	768	Open in IMG/M
2162886013\|SwBSRL2_contig_9881702	All Organisms → cellular organisms → Bacteria → Proteobacteria	1352	Open in IMG/M
3300000891\|JGI10214J12806_12420914	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1497	Open in IMG/M
3300001431\|F14TB_100999152	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1200	Open in IMG/M
3300003319\|soilL2_10127620	All Organisms → cellular organisms → Bacteria → Proteobacteria	1255	Open in IMG/M
3300003319\|soilL2_10320092	All Organisms → cellular organisms → Bacteria → Proteobacteria	1481	Open in IMG/M
3300003502\|JGI26143J51219_1009310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300003987\|Ga0055471_10000384	All Organisms → cellular organisms → Bacteria	5422	Open in IMG/M
3300003987\|Ga0055471_10228183	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	587	Open in IMG/M
3300003993\|Ga0055468_10064344	All Organisms → cellular organisms → Bacteria → Proteobacteria	966	Open in IMG/M
3300003996\|Ga0055467_10259727	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300003997\|Ga0055466_10021379	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1404	Open in IMG/M
3300004114\|Ga0062593_100423519	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1200	Open in IMG/M
3300004463\|Ga0063356_100334882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1902	Open in IMG/M
3300004463\|Ga0063356_101327845	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1054	Open in IMG/M
3300004463\|Ga0063356_101516199	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	993	Open in IMG/M
3300005172\|Ga0066683_10392619	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300005294\|Ga0065705_10005968	All Organisms → cellular organisms → Bacteria → Proteobacteria	4268	Open in IMG/M
3300005336\|Ga0070680_100291161	All Organisms → cellular organisms → Bacteria → Proteobacteria	1384	Open in IMG/M
3300005471\|Ga0070698_100239452	All Organisms → cellular organisms → Bacteria → Proteobacteria	1748	Open in IMG/M
3300005836\|Ga0074470_10970315	All Organisms → cellular organisms → Bacteria → Proteobacteria	26599	Open in IMG/M
3300005874\|Ga0075288_1000564	All Organisms → cellular organisms → Bacteria	4794	Open in IMG/M
3300005886\|Ga0075286_1000291	All Organisms → cellular organisms → Bacteria → Proteobacteria	6647	Open in IMG/M
3300005888\|Ga0075289_1007882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1394	Open in IMG/M
3300006049\|Ga0075417_10008069	All Organisms → cellular organisms → Bacteria → Proteobacteria	3761	Open in IMG/M
3300006049\|Ga0075417_10142278	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1112	Open in IMG/M
3300006844\|Ga0075428_100318347	All Organisms → cellular organisms → Bacteria → Proteobacteria	1672	Open in IMG/M
3300006844\|Ga0075428_100501392	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1299	Open in IMG/M
3300006845\|Ga0075421_100007959	All Organisms → cellular organisms → Bacteria → Proteobacteria	12987	Open in IMG/M
3300006847\|Ga0075431_100067808	All Organisms → cellular organisms → Bacteria → Proteobacteria	3683	Open in IMG/M
3300006876\|Ga0079217_10025757	All Organisms → cellular organisms → Bacteria → Proteobacteria	2131	Open in IMG/M
3300006880\|Ga0075429_100594170	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300006894\|Ga0079215_10017667	All Organisms → cellular organisms → Bacteria → Proteobacteria	2335	Open in IMG/M
3300006918\|Ga0079216_10021309	All Organisms → cellular organisms → Bacteria → Proteobacteria	2443	Open in IMG/M
3300009087\|Ga0105107_10587772	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	775	Open in IMG/M
3300009147\|Ga0114129_10578820	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1457	Open in IMG/M
3300009157\|Ga0105092_10357893	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	828	Open in IMG/M
3300010336\|Ga0134071_10016328	All Organisms → cellular organisms → Bacteria → Proteobacteria	3078	Open in IMG/M
3300012204\|Ga0137374_10015925	All Organisms → cellular organisms → Bacteria → Proteobacteria	8650	Open in IMG/M
3300012349\|Ga0137387_10450610	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	934	Open in IMG/M
3300012350\|Ga0137372_10031592	All Organisms → cellular organisms → Bacteria → Proteobacteria	4847	Open in IMG/M
3300012355\|Ga0137369_10061156	All Organisms → cellular organisms → Bacteria → Proteobacteria	3233	Open in IMG/M
3300012976\|Ga0134076_10440671	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300014255\|Ga0075320_1131744	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	517	Open in IMG/M
3300014263\|Ga0075324_1172807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300014268\|Ga0075309_1005857	All Organisms → cellular organisms → Bacteria → Proteobacteria	2417	Open in IMG/M
3300014311\|Ga0075322_1000626	All Organisms → cellular organisms → Bacteria → Proteobacteria	4935	Open in IMG/M
3300015371\|Ga0132258_12424423	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1314	Open in IMG/M
3300017997\|Ga0184610_1016884	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1920	Open in IMG/M
3300018028\|Ga0184608_10134570	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1057	Open in IMG/M
3300018028\|Ga0184608_10140824	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1034	Open in IMG/M
3300018031\|Ga0184634_10491558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300018052\|Ga0184638_1152238	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	834	Open in IMG/M
3300018054\|Ga0184621_10025435	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1855	Open in IMG/M
3300018059\|Ga0184615_10021793	All Organisms → cellular organisms → Bacteria	3533	Open in IMG/M
3300018061\|Ga0184619_10520700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	523	Open in IMG/M
3300018076\|Ga0184609_10008779	All Organisms → cellular organisms → Bacteria → Proteobacteria	3698	Open in IMG/M
3300018076\|Ga0184609_10138258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1116	Open in IMG/M
3300018076\|Ga0184609_10262793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	807	Open in IMG/M
3300018078\|Ga0184612_10154775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1198	Open in IMG/M
3300018079\|Ga0184627_10058605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2000	Open in IMG/M
3300018422\|Ga0190265_10342422	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1579	Open in IMG/M
3300018422\|Ga0190265_11499895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	788	Open in IMG/M
3300018466\|Ga0190268_12174029	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300019789\|Ga0137408_1397345	All Organisms → cellular organisms → Bacteria → Proteobacteria	4370	Open in IMG/M
3300019889\|Ga0193743_1196732	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	644	Open in IMG/M
3300021073\|Ga0210378_10030311	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2159	Open in IMG/M
3300022756\|Ga0222622_10432027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	932	Open in IMG/M
3300025155\|Ga0209320_10127450	All Organisms → cellular organisms → Bacteria → Proteobacteria	1147	Open in IMG/M
3300025165\|Ga0209108_10569887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300025324\|Ga0209640_10002648	All Organisms → cellular organisms → Bacteria	15606	Open in IMG/M
3300025559\|Ga0210087_1000030	All Organisms → cellular organisms → Bacteria	17357	Open in IMG/M
3300025559\|Ga0210087_1000813	All Organisms → cellular organisms → Bacteria → Proteobacteria	6763	Open in IMG/M
3300025791\|Ga0210115_1000586	All Organisms → cellular organisms → Bacteria	10533	Open in IMG/M
3300025795\|Ga0210114_1010459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2090	Open in IMG/M
3300025796\|Ga0210113_1012624	All Organisms → cellular organisms → Bacteria	1771	Open in IMG/M
3300025992\|Ga0208775_1005013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	941	Open in IMG/M
3300025993\|Ga0208415_1000182	All Organisms → cellular organisms → Bacteria	4537	Open in IMG/M
3300026003\|Ga0208284_1014263	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300026025\|Ga0208778_1004380	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1287	Open in IMG/M
3300027252\|Ga0209973_1044968	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300027277\|Ga0209846_1042940	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300027614\|Ga0209970_1065261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	672	Open in IMG/M
3300027617\|Ga0210002_1005807	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1854	Open in IMG/M
3300027637\|Ga0209818_1007730	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2118	Open in IMG/M
3300027639\|Ga0209387_1026128	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1164	Open in IMG/M
3300027722\|Ga0209819_10327830	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300027873\|Ga0209814_10111483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1164	Open in IMG/M
3300027873\|Ga0209814_10460612	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	562	Open in IMG/M
3300027876\|Ga0209974_10067571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1216	Open in IMG/M
3300028420\|Ga0210366_10056580	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1283	Open in IMG/M
3300028814\|Ga0307302_10339123	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300030006\|Ga0299907_10062157	All Organisms → cellular organisms → Bacteria → Proteobacteria	3000	Open in IMG/M
3300030006\|Ga0299907_10172254	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1789	Open in IMG/M
3300030006\|Ga0299907_10381292	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1136	Open in IMG/M
3300030006\|Ga0299907_10445915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1032	Open in IMG/M
3300030006\|Ga0299907_10878953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300030606\|Ga0299906_10018338	All Organisms → cellular organisms → Bacteria → Proteobacteria	5602	Open in IMG/M
3300030620\|Ga0302046_10856958	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	729	Open in IMG/M
(restricted) 3300031197\|Ga0255310_10085188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	841	Open in IMG/M
3300031228\|Ga0299914_10940887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	710	Open in IMG/M
3300031229\|Ga0299913_10110581	All Organisms → cellular organisms → Bacteria → Proteobacteria	2690	Open in IMG/M
3300031229\|Ga0299913_10181090	All Organisms → cellular organisms → Bacteria → Proteobacteria	2084	Open in IMG/M
3300032157\|Ga0315912_11535918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.73%
Host-Associated	Host-Associated	18.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.88%
Aquatic	Environmental → Aquatic	28.85%
Plants	Host-Associated → Plants	18.27%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.88%
Sediment	Environmental → Aquatic → Sediment	14.42%
Marine	Environmental → Aquatic → Marine	10.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.65%
Freshwater	Environmental → Aquatic → Freshwater	3.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	14.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.58%
Wetlands	Environmental → Aquatic → Marine → Wetlands	9.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.85%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Sand	Environmental → Terrestrial → Soil → Sand	1.92%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	14.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.58%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	9.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.62%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.69%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.92%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	9.62%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.62%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	7.69%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	6.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.81%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	3.85%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.96%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.96%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.96%
Sandy Soil	Environmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003502	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM	Host-Associated	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014255	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleC_D2	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014311	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025165	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 1	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025791	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025795	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025992	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104 (SPAdes)	Environmental	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026003	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026025	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103 (SPAdes)	Environmental	Open in IMG/M
3300027252	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027614	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028420	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.641 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031197 (restricted)	Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_06069940	2124908045	Soil	MSDNRDEKLDRMLRSRRHESASPDLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLTSALVIGIVIGFSAPQDTGSAADDSGVSVQSFLSADEALL
SwBSRL2_0309.00003910	2162886013	Switchgrass Rhizosphere	MNDNRDEKLDNLLRSRRVEPASPDLAQRIILKARQLPQTKTMPLWQSVRELFGEFHLPKPVYVLAGSLVFGIVIGFSAPQDTGPAADDGGASVQSFLS
JGI10214J12806_124209143	3300000891	Soil	MNDDRDKKLDNLLRSRRVEPAGADLAQRIILKARQLPQTKTVPLWQSVRELFGEFHLPKPAYVLASALVFGVVIGFNAPQDTAPA
F14TB_1009991522	3300001431	Soil	MSDNRDEKLDRMLRSRRHESASPDLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVIGIVIGFSAPQDTGSGADDSGVSVQSFLSADEALL*
soilL2_101276202	3300003319	Sugarcane Root And Bulk Soil	MSDNLDGKLDNLLRSRRVEPPSADLAQRIILQARQLPQTRSMPLWQSVRELFGEFHLPQPAYVLAGALLLGLVIGLGAPGSPSLTADDSATSIQSFLSADEALL*
soilL2_103200922	3300003319	Sugarcane Root And Bulk Soil	MSDHRDEKLDNLLRSRRIEPASPDLAQRIILKAQQVPQNKAVPLWQWIGQLFSEFHLPKPAYVLASALVLGMVIGFSAPQQANVAPDNGGASIQSFLSSDEDLL*
JGI26143J51219_10093101	3300003502	Arabidopsis Thaliana Rhizosphere	MTDNRDEKFDNLLRSRHIEPAGSDLAQRIILKARQRPQNNPMPFWQPIRDLFGEFHLPKPEYVLASVLFLGIAIGFTVPADTNLPSDDGSAYVQSFLSADEALL*
Ga0055471_100003842	3300003987	Natural And Restored Wetlands	MNRDEKLDHLLRSRRFESASADLAQRIIMKARTLPQAPNIPFWDSMRQLFAEFHLPKPGYVLASALMLGLVIGLSTPQDRSPLAEESSASVQSFLAADETLL*
Ga0055471_102281831	3300003987	Natural And Restored Wetlands	MSDNREEKLNSLLRARRIEPASTDLAQRIILKAQQLPQNKTMPLWQWIRDLFAEFHLPKPAYVLASSLILGMVIGFSAPEETNQSADDSGAIIQ
Ga0055468_100643442	3300003993	Natural And Restored Wetlands	MTDKRDEKLDSLLRSRSIEAASPDLAQRIILKAQQLPQNESLPLWQWLRDLFAEFHLPKPAYVLASALVMGIVIGFTAPQETSQGEDDSGAVIQTFLSGDEALL*
Ga0055467_102597272	3300003996	Natural And Restored Wetlands	DSLLRSRSIEAASPDLAQRIILKAQQLPQNESLPLWQWLRDLFAEFHLPKPAYVLASALVMGIVIGFTAPQETSQGEDDSGAVIQTFLSGDEALL*
Ga0055466_100213794	3300003997	Natural And Restored Wetlands	MNDNRDEKLDNLLRSRHIEPAGADLPQRILLKARGLPQNKPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVARDTNLPRDDGSAYVQSFLSADEALL*
Ga0062593_1004235192	3300004114	Soil	MNDNRDEKLDNLLRSRHIEPAGADLPQRIILKARGLPQNKPVPLWQSIRDLFGEFHLPKPEYVLVGVLLLGIGLGFSVAPDANLPRDDGTAYVQSFLSADEALL*
Ga0063356_1003348822	3300004463	Arabidopsis Thaliana Rhizosphere	MSDNRDKKLDTLLHSRRVEPASADLAQRIILKARQTPQIKTAPFWQSIRDLFGEFHLPKPAYVLASALVFGIMIGFSAPQDINPAAEDGGLSVQSFLTADEALL*
Ga0063356_1013278451	3300004463	Arabidopsis Thaliana Rhizosphere	MNDDRDKKLDNLLRSRRVEPAGADLAQRIILKARQLPQTKTVPLWQSVRELFGEFHLPKPAYVLASALVFGVVIGFNAPQDTAPTADDGSASVQSFLSADEALL*
Ga0063356_1015161991	3300004463	Arabidopsis Thaliana Rhizosphere	MSDSREEKLETLLRSRRLEPASADLAQRIILKAGQIPQTRTPSFWQSVRELFGEFHLPKPAYVLASALVLGIVIGLSAPQETTLAVDDSSVSIQGFLTADEALL*
Ga0066683_103926192	3300005172	Soil	MSDNRDEKLDRMLRSRRHEPASADLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVFGIVIGFSAPQDTGPAADDSGVSVQSFLSADEALL*
Ga0065705_100059683	3300005294	Switchgrass Rhizosphere	MNDNRDEKLDNLLRSRRVEPASPDLAQRIILKARQLPQTKTMPLWQSVRELFGEFHLPKPVYVLAGSLVFGIVIGFSAPQDTGPAADDGGASVQSFLSADEALL*
Ga0070680_1002911611	3300005336	Corn Rhizosphere	MNDDRDKKLDNLLRSRRVEPAGADLAQRIILKARQLPQTKTVPLWQSVRELFGEFHLPKPAYVLASALVFGVVIGFNAPQDTAPAADDGSASVQSFLSADEALL*
Ga0070698_1002394523	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MNDNRDEKLDNLLRSRRVEPASPDLAQRIIFKARQLPQTKTMPLWQSVRELFGEFHLPKPAYVLAGALVFGMVIGFSAPRDIAPAADDSGVSVQSFLSADEALL*
Ga0074470_1097031518	3300005836	Sediment (Intertidal)	MNDDLDKKLDNLLHSRRIEPASPDLAQRIILKAQKLPQTKPIPLWQSVRELFGEFHLPKPTFVLAGALVFGIVIGLSAPQDTNFAADDGGAALQSFLSADEAFL*
Ga0075288_10005642	3300005874	Rice Paddy Soil	MNDNRDEKLDNLLRSRHIEPAGADLPQRIMLKARGVPQNTPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVAPDTNLPRDDGSAYVQSFLSADEALL*
Ga0075286_10002919	3300005886	Rice Paddy Soil	MNDNRDEKLDNLLRSRHIEPAGADLPQRIMLKARGVPQNTPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVARDTNLPRDDGSAYVQSFLSADEALL*
Ga0075289_10078823	3300005888	Rice Paddy Soil	MNDNRDEKLDNLLRSRHIEPAGADLPQRIMLKARGVPQNKPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVARDTNLPRDDGSAYVQSFLSADEALL*
Ga0075417_100080693	3300006049	Populus Rhizosphere	MSDNRDEKLDRMLRSRRHESASPDLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVIGIVIGFSAPQDTGSAADDSGVSVQSFLSADEALL*
Ga0075417_101422781	3300006049	Populus Rhizosphere	MSDNRDEKLDRMLRSRRYEGASADLTQRIILKAQALPQNNTVSLWSWIRQLCVEFHLPKPAYVLASALVLGMVIGFSMPLDMSPGAEDNSVSVQNFLSADEALL*
Ga0075428_1003183473	3300006844	Populus Rhizosphere	MSDNRDEKLDRMLRSRRHESASPDLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVIGIVIGFSAPQDTGSAADDSGVSVQSFLSADEAL
Ga0075428_1005013922	3300006844	Populus Rhizosphere	MSDNRDEKLETLLRSRRIEPASSDLTQRIILKAQRTPQIKTPLFWQSVRDLFGEFHLPKPAYVLASALLLGVVIGFSAPQETHLAVDDSGVSIQGFLSADEALL*
Ga0075421_10000795911	3300006845	Populus Rhizosphere	MSDNRDEKLETLLRSRRIEPASSDLTQRIILKAQRTSQIKTPPFWQSVRDLFGEFHLPKPAYVLASALVLGVVIGFSAPQETHLAVDDSGVSIQGFLSADEALL*
Ga0075431_1000678085	3300006847	Populus Rhizosphere	MSDNRDEKLETLLRSRRIEPASSDLTQRIILKAQRTPQIKTPPFWQSVRDLFGEFHLPKPAYVLASALVLGVVIGFSAPQETHLAVDDSGVSIQGFLSADEALL*
Ga0079217_100257572	3300006876	Agricultural Soil	MSDNRDEKLEALLRSRRLEPASADLAQRIILKARQMPQTTTPSFWQSVRDLFGEFHLPKPAYVLASALVLGIVIGLSAPQETTLAADDSGGVSIQGFLSADETLL*
Ga0075429_1005941702	3300006880	Populus Rhizosphere	MSDNRDEKLDQMLRSRRHESASPDLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVIGIVIGFSAPQDTGSAADDSGVSVQSFLSADEALL*
Ga0079215_100176673	3300006894	Agricultural Soil	MSDNRDEKLETLLRSRRLEPASADLAQRIILKARQMPQTTIPSFWQSVRDLFGEFHLPKPAYVLASALVLGIVIGLSAPQETTLAADDSGGVSIQGFLSADETLL*
Ga0079216_100213093	3300006918	Agricultural Soil	MSDNRDEKLETLLRSRRLEPASADLAQRIILKARQMPQTTTPSFWQSVRDLFGEFHLPKPAYVLASALVLGIVIGLSAPQETTLAADDSGGVSIQGFLSADETLL*
Ga0105107_105877722	3300009087	Freshwater Sediment	MNDNRDEKLDNLLRSRYIEPAGADLPQRILLKARGLPQNKPVPLWQSIRDLFGEFHLPKPEYVLASVLLLGIGLGFSVAPDTNLPRDDGSAYVQSFLSADEALL*
Ga0114129_105788202	3300009147	Populus Rhizosphere	MSDNRDDKLDRMLRSRRLEPASPDLPKRIILKAQAMPQNKTVPLWQWLRQVCTEFHLPKPAYVLASALVFGMVIGFSTPPDRKLATDDNMQSFLSADEALL*
Ga0105092_103578932	3300009157	Freshwater Sediment	MSDNRDEKLETLLRSRRIEPASPDLTQRIILKAQQTPQIKTLPFWQSVRDLFGEFHLPKPAYVLASALVFGIVIGFSVPQDTNPGVEDAGASIQSFLSADEALL*
Ga0134071_100163283	3300010336	Grasslands Soil	MSDNRDEKLDQMLRFRRHEPASADLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVFGIVIGFSAPQDTGPAADDSGVSVQSFLSADEALL*
Ga0137374_100159257	3300012204	Vadose Zone Soil	MSDNRDEKLDRLLRSRRHESASPDLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVIGMVIGFSAPQDTGPAADDSGVSVQSFLSADEALL*
Ga0137387_104506101	3300012349	Vadose Zone Soil	MSDNRDEKLDRMLRSRRHEPASADLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVFGIVIGCSAPQDTGPAADDSG
Ga0137372_100315924	3300012350	Vadose Zone Soil	MSDNRDEKLDRLLRSRRHESASPDLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVIGIVIGFSAPQDTGPAADDSGVSVQSFLSADEALL*
Ga0137369_100611564	3300012355	Vadose Zone Soil	MSDNRDEKLETLLRSRRVAPANPEFAQRIILKARQTPQIKTPPFWQSVRDLFGEFHLPKPAYVLASALVLGVVIGFSAPQNTNLAVDDGGVSIQGFLSADEALL*
Ga0134076_104406711	3300012976	Grasslands Soil	RHEPASADLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVFGIVIGFSAPQDTGPAADDSGVSVQSFLSANEALL*
Ga0075320_11317442	3300014255	Natural And Restored Wetlands	IEPAGADLPQRILLKARGLPQNKPVPLWQSIRDLFGEFHLPKPEYVLASVLLLGIGLGFSVAPDTNLPRDDGSAYVQSFLSADEALL*
Ga0075324_11728071	3300014263	Natural And Restored Wetlands	MNDNRDEKLDNLLRSRHIEPAGADLPQRILLKARGLPQNKPVPLWQSIRDLFGEFHLPKPEYVLASVLLLGIGLGFSVAPDTNLPRDDGSAYVQSFLSADE
Ga0075309_10058574	3300014268	Natural And Restored Wetlands	MNRDEKLDHLLRSRRFESASADLAQRIIMKARTLPQAPNIPFWDSMRQLFAEFHLPKPGYVLASALMLGLVIGLSTPQDRSPLAEESSASVQSFLAADE
Ga0075322_10006264	3300014311	Natural And Restored Wetlands	MNDNRDEKLDNLLRSRHIEPAGADLPQRIMLKARGLPQNKPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVARDTNLPRDDGSAYVQSFLSADEALL*
Ga0132258_124244232	3300015371	Arabidopsis Rhizosphere	MNDNRDEKLDNLLRSRRVEPASPDLAQRIILKARQLPQTKTMPLWQSVRELFGEFHLPKPAYVLSSALVLGIVIGFSAPQNDSPIADDAGASVQSFLSADEALL*
Ga0184610_10168843	3300017997	Groundwater Sediment	MNDNRDEKLDKLLRSRRVEPASPDLAQRIIFKARQSPQTKTMPLWQSVRELFGEFHLPKPAYVLAGALVFGIVIGFSAPQDTGPAADDSGVSVQSFLSADEALL
Ga0184608_101345701	3300018028	Groundwater Sediment	MSDNRDEKLETLLRSRRVAPANPDFAQRIILKARQTPQVKTPPFWQSVRDLFGEFHLPKPAYVLASALLFGIVIGFSAPQDTGPPADDSGVSVQSFLSADEALL
Ga0184608_101408241	3300018028	Groundwater Sediment	MNDNRDEKLDNLLRSRRVEPASPDLAQRIIFKARQLPQKKTMSLWQSVRELFGEFHLPKPAYVLTGALVFGIVIGFSAPRDTAPAADDSGVSVQSFLSAD
Ga0184634_104915582	3300018031	Groundwater Sediment	MSENRDEKLDNLLRSRRVEPASPDLAQRIIFKARQLPQKKTMPLWQSVRELFGEFHLPKPAYILTGALVFGIVIGFSAPRDTAPAADDSGVSVQSFLSADEAML
Ga0184638_11522383	3300018052	Groundwater Sediment	SRRVEPASPDLAKRIIFKARQLPQKKTMPLWQSVRELFGEFHLPKPAYVLTGALVFGIVIGFSAPQDTGPAADDSGVSVQSFLSADETLL
Ga0184621_100254352	3300018054	Groundwater Sediment	MNDNRDEKLETLLRSRRVEPASPDLAQRIIFKARQLPQTKTMPLWQSVRELFGEFHLPKPAYVLTGALVFGIVIGFSAPRDTAPAADDSGVSVQSFLSADEALL
Ga0184615_100217932	3300018059	Groundwater Sediment	MSDNRDEKLDEILRSRRLEPAGPDLAQRIILKAQAIPQNKTMPLWQWIRQVCTEFHLPKPAYVLASALIFGVVIGFSTLPDINPATDDNVQSFLSADEALL
Ga0184619_105207002	3300018061	Groundwater Sediment	MSDNRDEKLETLLRSRRVAPANPDFAQRIILKARQTPQVKTPPFWQSVRDLFGEFHLPKPAYVLASALVLGVVIGFSAPQNTNLAVDDGGVSIQGFLSADEALL
Ga0184609_100087794	3300018076	Groundwater Sediment	MSDNRDEKLETLLRSRRVAPANPDFAQRIIFKARQTPQIKTPPFWQSVRDLFGEFHLPKPAYVLASALVLGVVIGFSAPQNTNLAVDDGGVSIQGFLSADEALL
Ga0184609_101382583	3300018076	Groundwater Sediment	EVFMSENRDEKLDAMLRSRRVEPTSPDLAKRIIFKARQLPQKKTMPLWQSVRELFGEFHLPKPAYVLTGALLFGMVIGFSAPRDTAPAADDSGVSVQSFLSADETLL
Ga0184609_102627932	3300018076	Groundwater Sediment	MSENRDEKLDAMLRSRRVEPASPDLAQRIIFKARQSPQTKTMPLWQSVRELFGEFHLPKPAYVLTGALVFGIVTGFSAPRDTAPAADDSGVSVQSFLSADETLL
Ga0184612_101547752	3300018078	Groundwater Sediment	MSDNRDEKLDKLLRSRRVEPASPDLAKRIIFKARQLPQKKTMPLWQSVRELFGEFHLPKPAYVLTGALVFGIVIGFSAPRDTAPAADDSGVSVQSFLSDDETLL
Ga0184627_100586052	3300018079	Groundwater Sediment	MNDNRDEKLDKLLRSRRVEPASPDLAQRIIFKARQSPQTKTMPLWQSVRELFGEFHLPKPAYVLAGALVFGIVIGFSAPQDTGPPADDSGVSVQSFLSADEALL
Ga0190265_103424222	3300018422	Soil	MNDNRDEKLDNLLRSRRIEPASPDLAQRIILKARQTPQIKTPPFWQSVRDLFGEFHLPKPAYVLASALVLGIVIGLSAPQETTLAVDDSSVSIQGFLSVDEALL
Ga0190265_114998952	3300018422	Soil	VMIDNRDEKLDNLLRSRRIDPASPDLVQRIILQARQTPQIKTPPFWQSVRELFGEFHLPKPAYVLTSALILGVVIGFSAPQDTNRAADESAAIQSFLSADEALL
Ga0190268_121740291	3300018466	Soil	NRDEKLETLLRSRRIEPASSDLTQRIILKAQRTPQIKTPPFWQSVRDLFGEFHLPKPAYVLASALVLGVVIGFSAPQETHLAVDDSGVSIQGFLSADEALL
Ga0137408_13973454	3300019789	Vadose Zone Soil	MSDNRDEKLDRMLRSRRHEPASADLAQRIIFKARQLPQTKTMPLWQSVREMFGEFHLPKPAYVLASALVFGIVIGFSAPQDTGPAADDSGVSVQSFLSADEALL
Ga0193743_11967322	3300019889	Soil	MIDNRDEKLDNLLRSRYVEPASTDLAQRIILKARQMPQNKTISLWQWVRELFSEFHLPKPGYVLASALVLGLVIGFSVPQDTNTEADDSGSSIQSFLSADESLL
Ga0210378_100303111	3300021073	Groundwater Sediment	MNDNRDEKLDNLLRLRRVEPASPDLAQRIIFKARQLPQTKTMPLWQSVRELFGEFHLPKPAYVLASALVFGIVIGFGAPQDTGPAADDSGVSVQSFLSADE
Ga0222622_104320271	3300022756	Groundwater Sediment	SRRVAPANPDFAQRIILKARQTPQVKTPPFWQSVRDLFGEFHLPKPAYVLASALVLGVVIGFSAPQNTNLAVDDGGVSIQGFLSADEALL
Ga0209320_101274502	3300025155	Soil	MNRDEKLDNMLRSRRVEPASADLAQRIILKARSLPQAPHISFWDSMRQLFAEFHLPKPGYVLASALILGVVIGFSTPQDRSPIAEESSASVQGFLAADETLL
Ga0209108_105698871	3300025165	Soil	MNGNRDEKLDNMLRSRRVEPASADLAQRIILKARSLPQAPHISFWDSMRQLFAEFHLPKPGYVLASALILGVVIGFSTPQDRSPIAEESSASVQGFLAADETLL
Ga0209640_1000264815	3300025324	Soil	MNGNRDEKLDNMLRSRRVEPAGADLAQRIILKARSLPQAPHISFWDSMRQLFAEFHLPKPGYVLASALILGVVIGFSTPQDRSPIAEESSASVQGFLAADETLL
Ga0210087_10000305	3300025559	Natural And Restored Wetlands	MNRDEKLDHLLRSRRFESASADLAQRIIMKARTLPQAPNIPFWDSMRQLFAEFHLPKPGYVLASALMLGLVIGLSTPQDRSPLAEESSASVQSFLAADETLL
Ga0210087_10008135	3300025559	Natural And Restored Wetlands	MNDNRDEKLDNLLRSRHIEPAGADLPQRIMLKARGVPQNTPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVARDTNLPRDDGSAYVQSFLSADEALL
Ga0210115_10005864	3300025791	Natural And Restored Wetlands	MNDNRDEKLDNLLRSRHIEPAGADLPQRIMLKARGVPQNTPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVAPDTNLPRDDGSAYVQSFLSADEALL
Ga0210114_10104593	3300025795	Natural And Restored Wetlands	MNDNRDEKLDNLLRSRHIEPAGADLPQRILLKARGLPQNKPVPLWQSIRDLFGEFHLPKPEYVLASVLLLGIGLGFSVAPDTNLPRDDGSAYVQSFLSADEALL
Ga0210113_10126243	3300025796	Natural And Restored Wetlands	MTDKRDEKLDSLLRSRSIEAASPDLAQRIILKAQQLPQNESLPLWQWLRDLFAEFHLPKPAYVLASALVMGIVIGFTAPQETSQGEDDSGAVIQTFLSGDEALL
Ga0208775_10050131	3300025992	Rice Paddy Soil	RTCEVFMNDNRDEKLDNLLRSRHIEPAGADLPQRIMLKARGVPQNTPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVARDTNLPRDDGSAYVQSFLSADEALL
Ga0208415_10001822	3300025993	Rice Paddy Soil	MNDNRDEKLDNLLRSRHIEPAGADLPQRIMLKARGVPQNKPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVAPDTNLPRDDGSAYVQSFLSADEALL
Ga0208284_10142632	3300026003	Rice Paddy Soil	HIEPAGADLPQRIMLKARGVPQNTPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVARDTNLPRDDGSAYVQSFLSADEALL
Ga0208778_10043802	3300026025	Rice Paddy Soil	MNDNRDEKLDNLLRSRHIEPAGADLPQRIMLKARGVPQNKPVPLWQSIRDLFGEFHLPKPEYVLAGVLLLGIGLGFSVARDTNLPRDDGSAYVQSFLSADEALL
Ga0209973_10449682	3300027252	Arabidopsis Thaliana Rhizosphere	MTDNRDEKFDNLLRSRHIEPAGSDLAQRIILKARQRPQNNPMPFWQPIRDLFGEFHLPKPEYVLASVLFLGIAIGFTVPADTNLPSDDGSAYVQSFLSADEALL
Ga0209846_10429402	3300027277	Groundwater Sand	MNDNRDEKLDNLLRSRRLEPASPDLAQRIIFKARQLPQTKTMPLWQSVRDLFGEFHLPKPAYVLASALVFGIVIGFSAPQDTNLAVDDGGVSIQGFLSEDEALL
Ga0209970_10652611	3300027614	Arabidopsis Thaliana Rhizosphere	MNDNRDEKLDNLLRSRHIEPAGADLPQRIILKARGLPQNKPVPLWQSIRDLFGEFHLPKPEYVLVGVLLLGIGLGFSVAPDANLPRDDGTAYVQSFLSADEALL
Ga0210002_10058073	3300027617	Arabidopsis Thaliana Rhizosphere	LDNLLRSRHIEPAGADLPQRIILKARGLPQNKPVPLWQSIRDLFGEFHLPKPEYVLVGVLLLGIGLGFSVAPDANLPRDDGTAYVQSFLSADEALL
Ga0209818_10077303	3300027637	Agricultural Soil	MSDNRDEKLETLLRSRRLEPASADLAQRIILKARQMPQTTTPSFWQSVRDLFGEFHLPKPAYVLASALVLGIVIGLSAPQETTLAADDSGGVSIQGFLSADETLL
Ga0209387_10261282	3300027639	Agricultural Soil	MSDNRDEKLETLLRSRRLEPASADLAQRIILKARQMPQTTIPSFWQSVRDLFGEFHLPKPAYVLASALVLGIVIGLSAPQETTLAADDSGGVSIQGFLSADETLL
Ga0209819_103278302	3300027722	Freshwater Sediment	MSDNRDEKLETLLRSRRIEPASPDLTQRIILKAQQTPQIKTLPFWQSVRDLFGEFHLPKPAYVLASALVFGIVIGFSVPQDTNPGVEDAGASIQ
Ga0209814_101114833	3300027873	Populus Rhizosphere	MSDNRDEKLDRMLRSRRYEGASADLTQRIILKAQALPQNNTVSLWSWIRQLCVEFHLPKPAYVLASALVLGMVIGFSMPLDMSPGAEDNSVSVQNFLSADEALL
Ga0209814_104606122	3300027873	Populus Rhizosphere	DNLLRSRRVEPASPDLAQRIIFKARQLPQTKTMPLWQSVRDLFGEFHLPKPAYVLASALVIGIVIGFSAPQDTGSAADDSGVSVQSFLSADEALL
Ga0209974_100675712	3300027876	Arabidopsis Thaliana Rhizosphere	MNDNRDEKLDNLLRSRHIEPAGADLPQRILLKARGLPQNKPVPLWQSIRDLFGEFHLPKPEYVLVGVLLLGIGLGFSVAPDANLPRDDGTAYVQSFLSADEALL
Ga0210366_100565801	3300028420	Estuarine	MNDNLDKKLDNLLRSRRVEPASPDLAQRIIFKARQLPQTKTLPFWQSVRELFGEFHLPKPAYVLASALVFGMVIGFSAPQDTNLAADDGGAAIQSFLSADESLL
Ga0307302_103391232	3300028814	Soil	MSDNRDEKLETLLRSRRVAPANPDFAQRIILKARQTPQVKTPPFWQSVRDLFGEFHLPKPAYVLASALVLGVVIGFSAPQSTNLAVDDGGVSIQGFLSADEALL
Ga0299907_100621573	3300030006	Soil	MTDKRDEKLDGLLRSRSIEAASPDLAQRVILKAQQLPQSNSLPLWQWLRDLFAEFHLPKPAYVLASALVMGMVIGFSVPQETSQGEDDSGAIIQTFLSGDEALL
Ga0299907_101722543	3300030006	Soil	MSDNRDEKLETLLRSRRLEPASADLAQRIILKARQMPQTRTPPFWQSVRELFGEFHLPKPAYVLASALVLGIVIGLSAPQETTLAVDDSSVSIQGFLSADEALL
Ga0299907_103812922	3300030006	Soil	MNGNRDEKLDNLLRSRRVEPASADLAQRIILKARSLPQAPHISLWDSMRQLFAEFHLPKPGYVLASALILGVVIGFSTPQDRSPIAEESSASVQGFLAADETLL
Ga0299907_104459152	3300030006	Soil	MNDNRDEKLDNLLRSRRVEPASADLAQRIILMAQSLPQGSNLSLWQSMRQLFAEFHLPKPGYVLAGALLLGMVIGFSTRESPPFAEDNSVSVQNFLAADEGLL
Ga0299907_108789532	3300030006	Soil	KAIYEVVMIDNRDEKLDNLLRSRSIEPAGSDLAQRIILKARQLPQNKNMPLWQWISDLFAEFHLPKPAYVLASALVLGMVIGFSAPQDTSQGADDGGALIQTFLSADEAFL
Ga0299906_100183385	3300030606	Soil	MNRDEKLDNLLRSRRVEPAGADLAQRIILKARSLPQAPHISFWDSMRQLFAEFHLTKPGYVLASALMLGVVIGFSTPQDRSPLAEESSASVQSFLAADETLL
Ga0302046_108569582	3300030620	Soil	MNRDEKLDNLLRSRRVEPAGADLAQRIILKARSLPQAPHISFWDSMRQLFAEFHLPKPGYVLASALILGVVIGFSTPQDRSPLAEESSASVQSFLAADETLL
(restricted) Ga0255310_100851882	3300031197	Sandy Soil	MSDNRDDKLDAMLRSRRLEPASPDLAQRIILQARQTPQIKTPPFWQSVRELFGEFHLPKPAYVLAGALVFGIVIGFSAPQETGPAIDDSGLSVQSFLSADEALL
Ga0299914_109408872	3300031228	Soil	MSDNRDEKLETLLRSRRLEPASPDLAQRIILKARQMPQTRTPPFWQSVRELFGEFHLPKPAYVLASALVLGIVIGLSAPQETTLAVDDSSASVQGFLTADEALL
Ga0299913_101105813	3300031229	Soil	MIDKREQKLDNLLRARRVEPASPDLAQRIILKARSLPQAPSMPLWQSLRQVFAEFHLPKPGYVLAGALLLGMVIGFSAPQESSFAEENSLSVQNFLSADEALL
Ga0299913_101810901	3300031229	Soil	MNGNRDEKLDNMLRSRRVEPANADLAQRIILKARSLPQAPHISFWDSMRQLFAEFHLPKPGYVLASALILGVVIGFSTPQDRSPIAEESSASVQGFLAADETLL
Ga0315912_115359182	3300032157	Soil	MNDNRDEKLDHLLRSRRVEPASMDLAQRIILKAQQVPQNKTLPLWQWVRELFSEFHLPKPGYVLASALVLGMVIGFSVPQDTTVGDDDSGSSVQSFLSADEALL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters