Metagenome / Metatranscriptome Family F098246

Basic Information
Family ID	F098246
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	94 residues
Representative Sequence	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLSKQNGVSSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHK
Number of Associated Samples	87
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (70.192 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (19.231 % of family members)
Environment Ontology (ENVO)	Unclassified (34.615 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.885 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Mixed	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.70% β-sheet: 0.00% Coil/Unstructured: 16.30%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00483	NTP_transferase	45.19
PF00908	dTDP_sugar_isom	6.73
PF04321	RmlD_sub_bind	1.92
PF07136	DUF1385	0.96
PF01551	Peptidase_M23	0.96
PF01047	MarR	0.96
PF10604	Polyketide_cyc2	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1898	dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme	Cell wall/membrane/envelope biogenesis [M]	6.73
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	3.85
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	3.85
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	3.85
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	1.92
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.92
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.92
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	1.92
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	1.92
COG3872	Uncharacterized conserved protein YqhQ, DUF1385 family	Function unknown [S]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.19 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.19 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.19 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	61.54 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61.54 %
Unclassified	root	N/A	29.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.92 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.92 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.92 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.92 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.92 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.92 %
Solirubrobacter sp. CPCC 204708	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001431\|F14TB_102124562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300002067\|JGI24735J21928_10201491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300003998\|Ga0055472_10181511	Not Available	640	Open in IMG/M
3300004157\|Ga0062590_100691379	Not Available	917	Open in IMG/M
3300004463\|Ga0063356_103833184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300005329\|Ga0070683_101382991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	676	Open in IMG/M
3300005457\|Ga0070662_100226865	Not Available	1493	Open in IMG/M
3300005457\|Ga0070662_100393083	Not Available	1143	Open in IMG/M
3300005535\|Ga0070684_101651398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	604	Open in IMG/M
3300005547\|Ga0070693_100351332	Not Available	1009	Open in IMG/M
3300005564\|Ga0070664_100906494	Not Available	827	Open in IMG/M
3300005564\|Ga0070664_102067465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300005616\|Ga0068852_100281862	Not Available	1602	Open in IMG/M
3300005616\|Ga0068852_100978512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	864	Open in IMG/M
3300005618\|Ga0068864_101108865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300005937\|Ga0081455_10328772	Not Available	1086	Open in IMG/M
3300006038\|Ga0075365_10624075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	762	Open in IMG/M
3300006580\|Ga0074049_10860866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300006871\|Ga0075434_102137274	Not Available	564	Open in IMG/M
3300006881\|Ga0068865_100086753	All Organisms → cellular organisms → Bacteria	2260	Open in IMG/M
3300009098\|Ga0105245_10790592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	986	Open in IMG/M
3300009100\|Ga0075418_12001280	Not Available	631	Open in IMG/M
3300009545\|Ga0105237_11076458	Not Available	811	Open in IMG/M
3300009551\|Ga0105238_12163949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	591	Open in IMG/M
3300010397\|Ga0134124_13053365	Not Available	512	Open in IMG/M
3300012476\|Ga0157344_1017092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300012503\|Ga0157313_1031952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	603	Open in IMG/M
3300012892\|Ga0157294_10074877	Not Available	822	Open in IMG/M
3300012893\|Ga0157284_10290692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300012896\|Ga0157303_10007815	Not Available	1538	Open in IMG/M
3300012902\|Ga0157291_10022101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1282	Open in IMG/M
3300012914\|Ga0157297_10064350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1004	Open in IMG/M
3300012943\|Ga0164241_11057404	Not Available	597	Open in IMG/M
3300012955\|Ga0164298_10909585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300012961\|Ga0164302_11936490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300012984\|Ga0164309_11623194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300013102\|Ga0157371_10381146	Not Available	1030	Open in IMG/M
3300014326\|Ga0157380_10505853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1175	Open in IMG/M
3300014326\|Ga0157380_13052162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300015372\|Ga0132256_101392129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300015373\|Ga0132257_100969085	Not Available	1069	Open in IMG/M
3300015373\|Ga0132257_104566058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	504	Open in IMG/M
3300015374\|Ga0132255_105619381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	531	Open in IMG/M
3300018466\|Ga0190268_12046210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300018469\|Ga0190270_12889945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300018476\|Ga0190274_11081051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	881	Open in IMG/M
3300019362\|Ga0173479_10109814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300020070\|Ga0206356_10095205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300020080\|Ga0206350_10430275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300020081\|Ga0206354_11705016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300021445\|Ga0182009_10719218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	542	Open in IMG/M
3300022892\|Ga0247753_1025488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300023064\|Ga0247801_1055170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300023077\|Ga0247802_1061796	Not Available	607	Open in IMG/M
3300023263\|Ga0247800_1063432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300023266\|Ga0247789_1066002	Not Available	685	Open in IMG/M
3300024055\|Ga0247794_10069595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	999	Open in IMG/M
3300025567\|Ga0210076_1107651	Not Available	610	Open in IMG/M
3300025900\|Ga0207710_10034316	All Organisms → cellular organisms → Bacteria	2229	Open in IMG/M
3300025901\|Ga0207688_10167286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1306	Open in IMG/M
3300025907\|Ga0207645_10042757	All Organisms → cellular organisms → Bacteria	2899	Open in IMG/M
3300025907\|Ga0207645_10682275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	698	Open in IMG/M
3300025914\|Ga0207671_10871975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300025919\|Ga0207657_10636490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	831	Open in IMG/M
3300025922\|Ga0207646_10925136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	773	Open in IMG/M
3300025925\|Ga0207650_11140034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300025933\|Ga0207706_10520649	Not Available	1025	Open in IMG/M
3300025938\|Ga0207704_10033752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2914	Open in IMG/M
3300025938\|Ga0207704_10150389	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300025942\|Ga0207689_10215945	Not Available	1585	Open in IMG/M
3300025944\|Ga0207661_12078882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300025960\|Ga0207651_10547633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1006	Open in IMG/M
3300025961\|Ga0207712_11435554	Not Available	618	Open in IMG/M
3300026142\|Ga0207698_10473852	Not Available	1213	Open in IMG/M
3300026142\|Ga0207698_11023907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300026952\|Ga0207434_1017715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. CPCC 204708	586	Open in IMG/M
3300026952\|Ga0207434_1020876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300027691\|Ga0209485_1242865	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	577	Open in IMG/M
3300028380\|Ga0268265_10834912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	900	Open in IMG/M
3300028589\|Ga0247818_10150852	Not Available	1516	Open in IMG/M
3300028589\|Ga0247818_10563285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	781	Open in IMG/M
3300028589\|Ga0247818_11260737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300028590\|Ga0247823_11486465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	508	Open in IMG/M
3300028592\|Ga0247822_10286509	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300028592\|Ga0247822_11283906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	613	Open in IMG/M
3300028596\|Ga0247821_10043173	All Organisms → cellular organisms → Bacteria	2447	Open in IMG/M
3300028596\|Ga0247821_10448954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	812	Open in IMG/M
3300028596\|Ga0247821_10471033	Not Available	794	Open in IMG/M
3300028812\|Ga0247825_10024487	All Organisms → cellular organisms → Bacteria	3962	Open in IMG/M
3300028812\|Ga0247825_10205452	Not Available	1362	Open in IMG/M
3300028812\|Ga0247825_11197242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300028870\|Ga0302254_10314619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300029984\|Ga0311332_10566915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	895	Open in IMG/M
3300031521\|Ga0311364_11625967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	637	Open in IMG/M
3300031847\|Ga0310907_10876314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	506	Open in IMG/M
3300031854\|Ga0310904_10829578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300031858\|Ga0310892_10098352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1595	Open in IMG/M
3300031940\|Ga0310901_10040715	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300032012\|Ga0310902_10207115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1155	Open in IMG/M
3300033551\|Ga0247830_10143446	Not Available	1737	Open in IMG/M
3300033551\|Ga0247830_10265341	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300034820\|Ga0373959_0212143	Not Available	516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.69%
Host-Associated	Host-Associated	42.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.77%
Plants	Host-Associated → Plants	42.31%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.08%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.27%
Peat	Environmental → Terrestrial → Peat	2.88%
Marine	Environmental → Aquatic → Marine	1.92%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.12%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.54%
Loam	Environmental → Terrestrial → Soil → Loam	5.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.92%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.96%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	19.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.54%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	19.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.88%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.88%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1	Host-Associated	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012476	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.6.yng.070610	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026952	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-10 (SPAdes)	Environmental	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TB_1021245621	3300001431	Soil	MAKKAAKVADTVEMLKPYLERALKDEEFRKDLKDALIAARELYGPLTKKNGVGAGALALATDKKAQEQMRRAIDDLLSAKDTLQGKKKKGHKGRNMVLLAG
JGI24735J21928_102014911	3300002067	Corn Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVSGSARTLATDKKAQEQMRRAIEDLMSAKDTLQG
Ga0055472_101815113	3300003998	Natural And Restored Wetlands	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLAKSNGVAAGAKTLATDKKAQEHMRRALEDLTSAANTLQG
Ga0062590_1006913791	3300004157	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVSGSARTLATDKKAQEQMRRAIEDLMS
Ga0063356_1038331842	3300004463	Arabidopsis Thaliana Rhizosphere	MAKKAAKMTDTLEMVKPYLERALKDEEFRKDLKDALGAARELYGPLAKQNGVGSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGR
Ga0070683_1013829913	3300005329	Corn Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLSKQNGVSSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRN
Ga0070662_1002268654	3300005457	Corn Rhizosphere	MAKKAAKMGDTIDLVRPYLERALRDEEFREDLKDALKAARELYGPLTKQNGVGASAKALATDKKTQEQMRRAVDDLLSAKDTLQGKKKKSHK
Ga0070662_1003930831	3300005457	Corn Rhizosphere	MAKKQAAKMTDTFEMVKPYLERALKDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHLRRALDDLSSAANTLQGSKKKSHKGRKMLILAGVIAG
Ga0070684_1016513981	3300005535	Corn Rhizosphere	MAKKAAKMTDTLEMVKPYLERALKDEDFRKDLKDALGAARELYGPLSKQNGVSSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLL
Ga0070693_1003513321	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALEDLSSAANTLQGAKKRSHKGRKMLILAGVIA
Ga0070664_1009064942	3300005564	Corn Rhizosphere	MAKKQAAKMVDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHLRRALDDLSSAANTLQGAKKKGGHKA
Ga0070664_1020674652	3300005564	Corn Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLSKQNGVSSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKK
Ga0068852_1002818621	3300005616	Corn Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLLAGVIA
Ga0068852_1009785121	3300005616	Corn Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVSGSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKTHKGRNMVLLAG
Ga0068864_1011088653	3300005618	Switchgrass Rhizosphere	MAKKAAKMTDTIELVKPYLERALRDEEFRNDLKDALGAARELYGPLTKQNGVGGSARALATDKKTQEQVRRALEDLMSAKDTLQGKKQKKAHKG
Ga0081455_103287721	3300005937	Tabebuia Heterophylla Rhizosphere	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALEDLTSAANTLQGAKKKSH
Ga0075365_106240753	3300006038	Populus Endosphere	MAKKKAATTMSDTIETVKPYLERALTDEEFRNDLKDALAAARQLYGPLSKQNGVSGGARALATDKKAQEQMRRVFEDMLSAKDTLQGKKKKGHKGRN
Ga0074049_108608661	3300006580	Soil	MAKKQAAKMGDTLEVVRPYLERALRDEDFRRDLKDALLAARELYGPLSKSNGGVAGSAKLLATDKKAQEQLRRAVEDFSNAAGTLKG
Ga0075434_1021372742	3300006871	Populus Rhizosphere	MAKKAAKMGDTIDLVRPYLERALRDEEFREDLKDALKAARELYRPLTKQNGVGASAKALATDKKTQEQMRRAVDDLLSAKDTLQGKKKKSHK
Ga0068865_1000867535	3300006881	Miscanthus Rhizosphere	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALEDLSSAANTLQGAKKRSHKGRKMLIL
Ga0105245_107905921	3300009098	Miscanthus Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLLA
Ga0075418_120012801	3300009100	Populus Rhizosphere	MAKKQAAKMADTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAASARSLATDKKAQAQLKRALDDLTSAKETLQGKKQSHKGRNML
Ga0105237_110764583	3300009545	Corn Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIEDLMSAKDTLQGK
Ga0105238_121639492	3300009551	Corn Rhizosphere	MAKKAAKMGDTIDLVRPYLERALRDEEFREDLKDALKAARELYGPLTKQNGVGASAKALATDKKTQEQMRRAVDDLLSAKDTLQGKKKKSHKGRNM
Ga0134124_130533652	3300010397	Terrestrial Soil	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALEDLSSAANTLQGAKKRSHK
Ga0105246_116023022	3300011119	Miscanthus Rhizosphere	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDIKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHLRRALD
Ga0157344_10170923	3300012476	Arabidopsis Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIDDLLSAKDNLQG
Ga0157313_10319522	3300012503	Arabidopsis Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLLAGV
Ga0157294_100748773	3300012892	Soil	LRVILRRRLNERKEGREMAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLSKQNGVSSSARTLATDKKAQEQMRR
Ga0157284_102906921	3300012893	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLLAGVIAG
Ga0157303_100078151	3300012896	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVSGSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLLAGVIAGA
Ga0157291_100221012	3300012902	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVSGSARTLATDKKAQEQMRRAIEDL*
Ga0157297_100643501	3300012914	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLSKQNGVGSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGR
Ga0164241_110574042	3300012943	Soil	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALEDLTSAANTLQGSKKKSH
Ga0164298_109095851	3300012955	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVSGSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKTHKGRNMVL
Ga0164302_119364902	3300012961	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVSGSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKTHKGRNMVLLAGVI
Ga0164309_116231941	3300012984	Soil	MAKKQAAKMTDTFEMVKPYLERALKDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEYLRRALDDLS
Ga0157371_103811463	3300013102	Corn Rhizosphere	LRVILRRRLNERKEGREMAKKAAKMTDTLELVKPYLERALKDEDFRKDLQDALGAARELYGPLSKQNGVGSSARTL
Ga0157380_105058533	3300014326	Switchgrass Rhizosphere	MAKKQAAKLTDTLDTVKPYLERALTDEEFRNDLKDALKAARELYGPLSKQNGVAASARSLATDKKAQAQLKRALDDLASAKDNLQGKKQKSHKSRNMLLLAGIIAGALY
Ga0157380_130521621	3300014326	Switchgrass Rhizosphere	MAKKAAKMGDTIDLVRPYLERALRDEEFREDLKDALKAARELYGPLTKQNGVGASAKALATDKKTQEQMRRAVDDLLSAKDT
Ga0132256_1013921293	3300015372	Arabidopsis Rhizosphere	MAKKAAKMTDTLEMVKPYLERALKDEEFRKDLKDALGAARELYGPLAKQNGVGSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLLAGVIAGALY
Ga0132257_1009690851	3300015373	Arabidopsis Rhizosphere	MAKKQAAKMVDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHLRRALDDLSSAANTLQGAKKKGGHKARKMLILAGIVAG
Ga0132257_1045660582	3300015373	Arabidopsis Rhizosphere	MAKKKAATVVGTFEVVKPYLERAMTDEDFRKDLKDALAAARELYGPLSKQNGVSGGARALATDKKAQDQMRRAIDDLLSAKDSLKGKKKSHKGRNMVLLAGLVAGALY
Ga0132255_1056193811	3300015374	Arabidopsis Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLSKQNGVSSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLLAG
Ga0190268_120462101	3300018466	Soil	MAKKQAAKLADTLDSVKPYLERALTDDDFRRDLKDALQAARELYGPMSKQNGVAESARLLATDKKAQEQLRRAIDDLASAKDTL
Ga0190270_128899452	3300018469	Soil	MAKRKAATTMSDTVETVKPYLARALNDEEFRNDLKDALAAARELYGPLSKQNGVSGGARALATDKKAQEQMRRAIDDLLSAKDTLQGKKKKGHKGRNMVLLAGIIAGALYN
Ga0190274_110810513	3300018476	Soil	MAKKKAATTVSDTIETVKPYLERALNDEEFRTDLKDALAAARELYGPLSKQNGVSGGARALATDKKAQEQMRRAIDDLLSAKDTLQ
Ga0173479_101098143	3300019362	Soil	MAKKAAKMGDTIDLVRPYLERALRDEEFREDLKDALKAARELYGPLTKQNGVGASAKALATDKKTQEQMRRAVDDLLSAKDTLQGKKKKSHKGRNMVLLAGVIAGAL
Ga0206356_100952052	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKAAKMTDTLEMVKPYLERALKDEDFRKDLKDALGAARELYGPLSKQNGVSSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSH
Ga0206350_104302752	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIEDLMSAKDTLQGKK
Ga0206354_117050161	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLL
Ga0182009_107192181	3300021445	Soil	MAKKAAKMTDTLEMVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSH
Ga0247753_10254881	3300022892	Soil	MAKKAAKMGDTIDLVRPYLERALRDEEFREDLKDALKAARELYGPLTKQNGVGASAKALATDKKTQEQMRRAVDDL
Ga0247801_10551701	3300023064	Soil	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALEDLSSAANTLQGAKKRSH
Ga0247802_10617961	3300023077	Soil	MAKKQAAKMVDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHLRRALDDLSSAANT
Ga0247800_10634321	3300023263	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKK
Ga0247789_10660021	3300023266	Soil	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHLRRALDDLSSAANTLQGAKKKSHTGRKML
Ga0247794_100695951	3300024055	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVSGSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKTHKGRNMVLLAGVIAGALYNPW
Ga0210076_11076513	3300025567	Natural And Restored Wetlands	MAKKAAKMGDTIDLVRPYLERALRDEEFRNDLKDALKAAKELYGPLTKQNGVGASAKALATDKKTQEQMRRAVDDLLSAKDTLQG
Ga0207710_100343165	3300025900	Switchgrass Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIEDLMSAKDTLQGKKK
Ga0207688_101672861	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKAAKMGDTIDLVRPYLERALRDEEFREDLKDALKAARELYGPLTKQNGVGASAKALATDKKTQEQMRRAVDDLLSAKDTLQGKKKKSHKGRNMVLLAGIVAGALY
Ga0207645_100427571	3300025907	Miscanthus Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHK
Ga0207645_106822751	3300025907	Miscanthus Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLSKQNGVSSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHK
Ga0207671_108719751	3300025914	Corn Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVSGSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKTHKGRNM
Ga0207657_106364901	3300025919	Corn Rhizosphere	MAKKAAKMGDTIDLVRPYLERALRDEEFREDLKDALKAARELYGPLTKQNGVGASAKALATDKKTQEQMRRAVDDLLSAKDTRQGKKKKSHKGRNMV
Ga0207646_109251363	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLLAGVIAGALYNPW
Ga0207650_111400343	3300025925	Switchgrass Rhizosphere	MAKKAAKMTDTIELVKPYLERALRDEEFRNDLKDALGAARELYGPLTKQNGVGGSARALATDKKTQEQVRRALE
Ga0207706_105206491	3300025933	Corn Rhizosphere	MAKKAAKMTDTIELVKPYLERALRDEEFRNDLKDALGAARELYGPLTKQNGVGGSARALATDKKTQEQVRRALEDLMSAKDTLQ
Ga0207704_100337521	3300025938	Miscanthus Rhizosphere	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALEDLSSAANTLQGAKKRSHKGRKMLILA
Ga0207704_101503893	3300025938	Miscanthus Rhizosphere	MAKKKAATTMSDTIETVKPYLERALTDEEFRNDLKDALAAARQLYGPLSKQNGVSAGARALATDKKAQEQMRRVFEDMLSAKDTLQGKKKK
Ga0207689_102159451	3300025942	Miscanthus Rhizosphere	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALEDLSSAANTLQGAKKRSHKGRKMLILAGVIAGALYN
Ga0207661_120788822	3300025944	Corn Rhizosphere	MAKKAAKMTDTLEMVKPYLERALKDEEFRKDLKDALGAARELYGPLAKQNGVGSSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKG
Ga0207651_105476333	3300025960	Switchgrass Rhizosphere	MAKKAAKMTDTLELVKPYLERALRDEEFRNDLKDALGAARELYGPLTKQNGVGGSARALATDKKTQEQVRRALEDLMSAKDTLQGKKQKKGHKGRNMVLLAGVLAGALYNP
Ga0207712_114355542	3300025961	Switchgrass Rhizosphere	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALEDLSSAANTLQGAKKRSHKGRKMLILAGVIAGA
Ga0207698_104738523	3300026142	Corn Rhizosphere	MAKKAAKMTDTIELVKPYLERALRDEEFRNDLKDALGAARELYGPLTKQNGVGGSARALATDKKTQEQVRRALEDLMSAKDTLQGKKQ
Ga0207698_110239071	3300026142	Corn Rhizosphere	MAKKAAKMGDTIDLVRPYLERALRDEEFREDLKDALKAARELYGPLTKQNGVGASAKALATDKKTQEQMRRAVDDLLSAKDTLQGKKKKSHKGRNMVLLAGIV
Ga0207434_10177151	3300026952	Soil	MAKKQAAKMADTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHLRRALDDLSSAANTLQ
Ga0207434_10208762	3300026952	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVSGSARTLATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLLAGVIAGALYNPWT
Ga0209485_12428653	3300027691	Agricultural Soil	MAKKQPARIADTFETLKPYLERALTDDEFRADLKDALGAARELYGPLSKGNGVAGSAKVLATDKKAQEQIRRALED
Ga0268265_108349121	3300028380	Switchgrass Rhizosphere	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLAKQNGVGSSARALATDKKAQEQMRRAIEDLMSAKDTLQGKKKKSHKGRNMVLLAGVIAGA
Ga0247818_101508521	3300028589	Soil	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALDDLTSAASTLQGSKKKSHKGRKMLILAGIVAGALYNPWT
Ga0247818_105632853	3300028589	Soil	MAKKAAKMTDTIELVKPYLERALRDEEFRNDLKDALGAARELYGPLTKQNGVGGSARALATDKKTQEQVRRALEDLMSAKDTLQGKKQKKGHK
Ga0247818_112607371	3300028589	Soil	MAKKQAAKLTDTLDTVKPYLERALTDEEFRNDLKDALKAARELYGPISKQNGVAASARSLATDKKAQAQLKRALDDLASAKDTLQGKKQKSHKSRNMLLLAGIIAGALYN
Ga0247823_114864651	3300028590	Soil	MAKKKAATVMGTFEVVKPYLERAMTDEEFRKDLKDALAAARELYGPLSKQNGVSGGARALATDKKTQDQMRRAMDDLLSAKDNLKGKKKSHKGRNMVLLAGLVAGALYNPWTGPQ
Ga0247822_102865091	3300028592	Soil	MAKRKAATTMADTMETVKPYLARALNDEEFRNDLKDALAAARELYGPLSKQNGVSGGARALATDKKAQEQMRRAIDDLLSAKDTLQGK
Ga0247822_112839061	3300028592	Soil	MAKKKAATAMADTMETVKPYLARALNDEEFRNDLKDALAAARELYGPLSKQNGVSGGARALATDKKAQEQMRRAIDDLLSAKDTLQGK
Ga0247821_100431735	3300028596	Soil	MAKKKAATAMADTMETVKPYLARALNDEEFRNDLKDALAAARELYGPLSKQNGVSGGARALATDKKAQEQMRRAIDDLLSAK
Ga0247821_104489541	3300028596	Soil	MAKRKAATTMSDTMETVKPYLARALNDDEFRNDLKDALAAARELYGPLSKQNGVSGGARALATDKKAQEQMRRAIDD
Ga0247821_104710333	3300028596	Soil	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHMRRALEDLTSAASTLQGSKKKSHMGR
Ga0247825_100244871	3300028812	Soil	MAKKKAATTMADTMETVKPYLARALNDEEFRNDLKDALAAARELYGPLSKQNGVSGGARALATDKKAQEQMRRAIDDLLSAKDTLQGK
Ga0247825_102054521	3300028812	Soil	MAKKQAAKMVDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHLRRALDDLSSAAN
Ga0247825_111972421	3300028812	Soil	MAKKQAAKLTDTLDTVKPYLERALTDEEFRNDLKDALKAARELYGPISKQNGVAASARSLATDKKAQAQLKRALDDLA
Ga0302254_103146192	3300028870	Fen	MAKKQAAKMGDTIEVVRPYLERALRDEDFRKDLKEALQAARELYGPLSKSNGGVAGSAKLLATDKKAQEQLRKAVEDFSSAAGTLKGGKSHKKGHKGRKMLLL
Ga0311332_105669151	3300029984	Fen	MAKKQAAKMGDTIEVVRPYLERALRDEDFRKDLKEALQAARELYGPLSKSNGGVAGSAKLLATDKKAQEQLRKAVEDFSSAAGTLKGGKSHKKGHKGRKMLLLAGVV
Ga0311364_116259671	3300031521	Fen	MAKKQAAKMGDTIEVVRPYLERALRDEDFRKDLKEALQAARELYGPLSKSNGGVAGSAKLLATDKKAQEQLRKAVE
Ga0310907_108763142	3300031847	Soil	MAKKAAKMTDTIELVKPYLERALRDEEFRNDLKDALGAARELYGPLTKQNGVGGSARALATDKKTQEQVRRALEDLMSAKDTLQGKKQKKGHKGRNMV
Ga0310904_108295781	3300031854	Soil	MAKKAAKMTDTLELVKPYLERALKDEDFRKDLKDALGAARELYGPLSKQNGVSSSARTLATDKKAQEQMRRAIEDLMSAKDTL
Ga0310892_100983523	3300031858	Soil	MAKKKAATTMSDTIETVKPYLERALTDEEFRNDLKDALAAARQLYGPLSKQNGVSAGARALATDKKAQEQMRRVFEDMLSAKETLQGKKKKSHKGR
Ga0310901_100407151	3300031940	Soil	MAKKKAAATVSDTIETVKPYLERALTDEEFRNDLKDALAAARQLYGPLSKQNGVSAGARALATDKKAQEQMRRVFEDMLSAKDTLQGKKKKGHKGRNMVLLAG
Ga0310902_102071152	3300032012	Soil	MAKKKAATTMSDTIETVKPYLERALTDEEFRNDLKDALAAARQLYGPLSKQNGVSAGARALATDKKAQEQMRRVFEDMLSAKDTLQGKKKKGHKG
Ga0247829_100257191	3300033550	Soil	MAKKKAATAMADTMETVKPYLARALNDEEFRNDLKDALAAARELYGPLSKQNGVSGGARALATDKKAQEQMRRAI
Ga0247830_101434461	3300033551	Soil	MAKKQAAKMVDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLTKSNGVAAGAKTLATDKKAQEHLRRAVDDLSSAANTLQGAK
Ga0247830_102653413	3300033551	Soil	MAKKQAAKLTDTLDTVKPYLERALTDEEFRNDLKDALKAARELYGPISKQNGVAASARSLATDKKAQAQLKRALDDLASAKDTLQGKKQKSH
Ga0373959_0212143_2_298	3300034820	Rhizosphere Soil	MAKKQAAKMTDTFETIKPYLERALTDEEFRQDLKDALSAARELYGPLAKSNGVAAGAKTLATDKKAQEHLRRALDDLSSAANTLQGAKKKGGHKARKML

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098246

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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