Metagenome / Metatranscriptome Family F098234

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098234
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	117 residues
Representative Sequence	MDKVQLENRVKELTVLIEEASSNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQEELTQRIMDRLEKVFAVAEDEE
Number of Associated Samples	72
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	25.96 %
% of genes from short scaffolds (< 2000 bps)	76.92 %
Associated GOLD sequencing projects	58
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (82.692 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (44.231 % of family members)
Environment Ontology (ENVO)	Unclassified (95.192 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (99.038 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.24% β-sheet: 8.97% Coil/Unstructured: 33.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF02562	PhoH	1.92
PF01068	DNA_ligase_A_M	1.92
PF00118	Cpn60_TCP1	0.96
PF13662	Toprim_4	0.96
PF04404	ERF	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.92
COG1702	Phosphate starvation-inducible protein PhoH, predicted ATPase	Signal transduction mechanisms [T]	1.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.92
COG1875	Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domains	General function prediction only [R]	1.92
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
All Organisms	root	All Organisms	17.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Viruses	superkingdom	All Organisms → Viruses	17.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.46 %
Virus NIOZ-UU157	species	All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157	3.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10113877	Not Available	859	Open in IMG/M
3300001450\|JGI24006J15134_10000612	Not Available	21831	Open in IMG/M
3300001450\|JGI24006J15134_10032232	All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157	2287	Open in IMG/M
3300001450\|JGI24006J15134_10085620	Not Available	1167	Open in IMG/M
3300001450\|JGI24006J15134_10092441	Not Available	1104	Open in IMG/M
3300002482\|JGI25127J35165_1029162	Not Available	1276	Open in IMG/M
3300002514\|JGI25133J35611_10008868	All Organisms → Viruses → Predicted Viral	4508	Open in IMG/M
3300002518\|JGI25134J35505_10003894	All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157	5611	Open in IMG/M
3300006735\|Ga0098038_1061699	Not Available	1339	Open in IMG/M
3300006737\|Ga0098037_1044669	Not Available	1605	Open in IMG/M
3300006752\|Ga0098048_1021025	All Organisms → Viruses → Predicted Viral	2187	Open in IMG/M
3300006754\|Ga0098044_1136765	Not Available	987	Open in IMG/M
3300006789\|Ga0098054_1024251	Not Available	2401	Open in IMG/M
3300006789\|Ga0098054_1292479	Not Available	583	Open in IMG/M
3300006789\|Ga0098054_1366359	Not Available	509	Open in IMG/M
3300006793\|Ga0098055_1105180	Not Available	1101	Open in IMG/M
3300006793\|Ga0098055_1297680	Not Available	603	Open in IMG/M
3300006793\|Ga0098055_1344568	Not Available	554	Open in IMG/M
3300006921\|Ga0098060_1192100	Not Available	559	Open in IMG/M
3300006928\|Ga0098041_1101779	Not Available	927	Open in IMG/M
3300007963\|Ga0110931_1052136	Not Available	1235	Open in IMG/M
3300008050\|Ga0098052_1062248	All Organisms → Viruses → Predicted Viral	1579	Open in IMG/M
3300008050\|Ga0098052_1122042	All Organisms → Viruses → Predicted Viral	1048	Open in IMG/M
3300008050\|Ga0098052_1212331	Not Available	749	Open in IMG/M
3300008050\|Ga0098052_1228390	Not Available	716	Open in IMG/M
3300008050\|Ga0098052_1352253	Not Available	551	Open in IMG/M
3300008220\|Ga0114910_1113350	Not Available	798	Open in IMG/M
3300008224\|Ga0105350_10018794	All Organisms → Viruses → Predicted Viral	3376	Open in IMG/M
3300009418\|Ga0114908_1273697	Not Available	505	Open in IMG/M
3300009604\|Ga0114901_1202052	Not Available	575	Open in IMG/M
3300009605\|Ga0114906_1210448	Not Available	648	Open in IMG/M
3300009613\|Ga0105228_129252	Not Available	506	Open in IMG/M
3300009619\|Ga0105236_1013219	Not Available	900	Open in IMG/M
3300010153\|Ga0098059_1086797	Not Available	1246	Open in IMG/M
3300010153\|Ga0098059_1170781	Not Available	853	Open in IMG/M
3300010153\|Ga0098059_1224040	Not Available	729	Open in IMG/M
3300010153\|Ga0098059_1358973	Not Available	552	Open in IMG/M
3300010153\|Ga0098059_1363961	Not Available	548	Open in IMG/M
3300012953\|Ga0163179_10304618	Not Available	1261	Open in IMG/M
3300017710\|Ga0181403_1009331	Not Available	2119	Open in IMG/M
3300017720\|Ga0181383_1019720	Not Available	1810	Open in IMG/M
3300017726\|Ga0181381_1038453	Not Available	1065	Open in IMG/M
3300017726\|Ga0181381_1065474	Not Available	785	Open in IMG/M
3300017727\|Ga0181401_1016767	Not Available	2235	Open in IMG/M
3300017729\|Ga0181396_1138910	Not Available	503	Open in IMG/M
3300017732\|Ga0181415_1068148	Not Available	805	Open in IMG/M
3300017738\|Ga0181428_1010191	All Organisms → Viruses → Predicted Viral	2147	Open in IMG/M
3300017738\|Ga0181428_1015242	Not Available	1772	Open in IMG/M
3300017739\|Ga0181433_1014444	Not Available	2140	Open in IMG/M
3300017739\|Ga0181433_1055070	Not Available	1007	Open in IMG/M
3300017743\|Ga0181402_1154912	Not Available	579	Open in IMG/M
3300017744\|Ga0181397_1195952	Not Available	506	Open in IMG/M
3300017745\|Ga0181427_1063405	Not Available	909	Open in IMG/M
3300017748\|Ga0181393_1015337	Not Available	2284	Open in IMG/M
3300017750\|Ga0181405_1053079	Not Available	1065	Open in IMG/M
3300017753\|Ga0181407_1055241	Not Available	1034	Open in IMG/M
3300017755\|Ga0181411_1093990	Not Available	890	Open in IMG/M
3300017755\|Ga0181411_1188506	Not Available	582	Open in IMG/M
3300017756\|Ga0181382_1078454	Not Available	915	Open in IMG/M
3300017759\|Ga0181414_1036154	Not Available	1333	Open in IMG/M
3300017760\|Ga0181408_1056276	All Organisms → Viruses → Predicted Viral	1047	Open in IMG/M
3300017764\|Ga0181385_1171115	Not Available	657	Open in IMG/M
3300017765\|Ga0181413_1014096	Not Available	2492	Open in IMG/M
3300017765\|Ga0181413_1030581	All Organisms → Viruses → Predicted Viral	1686	Open in IMG/M
3300017765\|Ga0181413_1073755	Not Available	1046	Open in IMG/M
3300017765\|Ga0181413_1117614	Not Available	807	Open in IMG/M
3300017765\|Ga0181413_1269282	Not Available	500	Open in IMG/M
3300017767\|Ga0181406_1024454	Not Available	1900	Open in IMG/M
3300017768\|Ga0187220_1114523	Not Available	815	Open in IMG/M
3300017768\|Ga0187220_1231764	Not Available	554	Open in IMG/M
3300017772\|Ga0181430_1248901	Not Available	501	Open in IMG/M
3300017779\|Ga0181395_1049517	Not Available	1388	Open in IMG/M
3300017782\|Ga0181380_1066857	Not Available	1269	Open in IMG/M
3300017782\|Ga0181380_1214372	Not Available	643	Open in IMG/M
3300020385\|Ga0211677_10006884	All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157	6686	Open in IMG/M
3300020469\|Ga0211577_10022333	All Organisms → Viruses → Predicted Viral	4925	Open in IMG/M
3300021084\|Ga0206678_10453012	Not Available	597	Open in IMG/M
3300021342\|Ga0206691_1463878	All Organisms → Viruses → Predicted Viral	1301	Open in IMG/M
3300021957\|Ga0222717_10208679	Not Available	1155	Open in IMG/M
3300021959\|Ga0222716_10135876	Not Available	1621	Open in IMG/M
3300022074\|Ga0224906_1054528	Not Available	1271	Open in IMG/M
3300025099\|Ga0208669_1017092	All Organisms → Viruses → unclassified viruses → Virus NIOZ-UU157	1913	Open in IMG/M
3300025103\|Ga0208013_1029253	Not Available	1582	Open in IMG/M
3300025103\|Ga0208013_1052422	Not Available	1105	Open in IMG/M
3300025108\|Ga0208793_1086585	Not Available	896	Open in IMG/M
3300025127\|Ga0209348_1167315	Not Available	636	Open in IMG/M
3300025127\|Ga0209348_1190302	Not Available	579	Open in IMG/M
3300025128\|Ga0208919_1136535	Not Available	768	Open in IMG/M
3300025131\|Ga0209128_1000058	Not Available	67354	Open in IMG/M
3300025133\|Ga0208299_1052982	All Organisms → Viruses → Predicted Viral	1536	Open in IMG/M
3300025133\|Ga0208299_1079184	All Organisms → Viruses → Predicted Viral	1158	Open in IMG/M
3300025133\|Ga0208299_1212181	Not Available	567	Open in IMG/M
3300025141\|Ga0209756_1000998	Not Available	26696	Open in IMG/M
3300025168\|Ga0209337_1000851	Not Available	24129	Open in IMG/M
3300025168\|Ga0209337_1020184	Not Available	3902	Open in IMG/M
3300025168\|Ga0209337_1024983	Not Available	3404	Open in IMG/M
3300025168\|Ga0209337_1033253	All Organisms → Viruses → Predicted Viral	2833	Open in IMG/M
3300025639\|Ga0209495_1088000	Not Available	970	Open in IMG/M
3300026113\|Ga0208453_110493	Not Available	633	Open in IMG/M
3300026115\|Ga0208560_1004931	Not Available	1093	Open in IMG/M
3300029309\|Ga0183683_1001387	Not Available	10002	Open in IMG/M
3300029448\|Ga0183755_1017594	All Organisms → Viruses → Predicted Viral	2478	Open in IMG/M
3300029787\|Ga0183757_1004258	Not Available	5032	Open in IMG/M
3300032073\|Ga0315315_10400423	Not Available	1277	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	53.85%
Strait	Environmental → Aquatic → Marine → Strait	34.62%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.65%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.92%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	53.85%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	34.62%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.65%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	44.23%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	34.62%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.81%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	3.85%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	3.85%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.92%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	1.92%
Methane Seep Mesocosm	Environmental → Aquatic → Marine → Unclassified → Unclassified → Methane Seep Mesocosm	1.92%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.92%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300002514	Marine viral communities from the Pacific Ocean - ETNP_6_85	Environmental	Open in IMG/M
3300002518	Marine viral communities from the Pacific Ocean - ETNP_6_100	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006793	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300006928	Marine viral communities from the Subarctic Pacific Ocean - 8_ETSP_OMZ_AT15162 metaG	Environmental	Open in IMG/M
3300007963	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008220	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_908	Environmental	Open in IMG/M
3300008224	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1E Hudson Canyon	Environmental	Open in IMG/M
3300009418	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s17	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300009613	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3737_250	Environmental	Open in IMG/M
3300009619	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017710	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28	Environmental	Open in IMG/M
3300017720	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017729	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11	Environmental	Open in IMG/M
3300017732	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 38 SPOT_SRF_2012-12-11	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017739	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017745	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 50 SPOT_SRF_2014-01-15	Environmental	Open in IMG/M
3300017748	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017753	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26	Environmental	Open in IMG/M
3300017755	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 34 SPOT_SRF_2012-07-09	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017767	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 29 SPOT_SRF_2011-12-20	Environmental	Open in IMG/M
3300017768	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 6 SPOT_SRF_2009-12-23 (version 2)	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017779	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 18 SPOT_SRF_2010-12-16	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021342	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025103	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)	Environmental	Open in IMG/M
3300025108	Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025128	Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)	Environmental	Open in IMG/M
3300025131	Marine viral communities from the Pacific Ocean - ETNP_6_100 (SPAdes)	Environmental	Open in IMG/M
3300025133	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300025639	Methane-oxidizing microbial communities from mesocosms in the Hudson Canyon - EN1E Hudson Canyon (SPAdes)	Environmental	Open in IMG/M
3300026113	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3737_250 (SPAdes)	Environmental	Open in IMG/M
3300026115	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 (SPAdes)	Environmental	Open in IMG/M
3300029309	Marine viral communities collected during Tara Oceans survey from station TARA_100 - TARA_R100001440	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300029787	Marine viral communities collected during Tara Oceans survey from station TARA_018 - TARA_A100000172	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_101138773	3300000115	Marine	MDKVQLENRVKELTVLIEEASGNVKNLVAEQESFTKRLDDLNKPKLSHAQMDEIQHIVESACETFDLDVSDCEYELQIDYDNRIQIDHLDWSRCQEELTQRIMDRLEKVFAVAEEE*
JGI24006J15134_1000061214	3300001450	Marine	MDKVQLENRVKELTVLIEESSNNVKNLVEEQNSFTKRLDDLNKPKLSPAKFDELQHIVESACEVFELEVNDCEYELELDYDNRIQINHFDWSRCQEDLTQHIMDRMESVFAVTEDEE*
JGI24006J15134_100322323	3300001450	Marine	MDNILNKQQMDREQLENRVKELTVLIEESSNGVKNLVDEQAAFTKRLDDLNKPKLSHAQMDQVQHIIESVCECFDIEVSECDLELEIDYDNRIQVNHLDWSRCQEELTQRIMDRLEEVLAVAEED*
JGI24006J15134_100856203	3300001450	Marine	VDNILNKQQMDKEQLENRVKELTVLIEESSNNVKNLVDEQAAFTKRLNDLNKPKLSHAQMDEVQHIVESACEVFDLDISECDMELELDYDNRVQVNHLDWSRCQEDLTQHIMDRLEEVFAVAEEDEE*
JGI24006J15134_100924413	3300001450	Marine	MDKEQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSPAQMDEVQHVVESACEVFDLDIDECDYNLEIDYDNRVQVNDIDWSRCQENLTQHIMDRLEEVFAVDEEDEE*
JGI25127J35165_10291621	3300002482	Marine	MNREQLETRVKELSVLIEEASGNVKKLVDEQAAFNKKLDDLDKPKLTYAQMDKLQHVIESAVEVFSIDIDDCDYNIEINYDNRVEVNDFDWSRCQEDLTTCIMERLENVFAVAEDEE*
JGI25133J35611_1000886817	3300002514	Marine	VDNILNKRQMNREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLSKPKLSPAQFDEIHLMIEGACECFDICPDDCDIELELDWDNKVRVNEFDWSRSKEDLVQHIMDRMEEIFAVAEDKE*
JGI25134J35505_1000389423	3300002518	Marine	VDNILNKRQMNREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLSKPKLSPAQFDEIHLMIEGACECFDICPDDCDIELELDWDNKVRVNEFDWSRS
Ga0098038_10616994	3300006735	Marine	MDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDEIQHIVESACECFDIDTSECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIMNRLEDFFAVAEDEE*
Ga0098037_10446691	3300006737	Marine	MDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDEIQHAVESACETFDMNVSDCELELELDYDNRVSVNNIDWSRCQEDLTYDIMNRLEKFFAVAEDEE*
Ga0098048_10210258	3300006752	Marine	VDNILNKRQMTKEQLENRVKELTVLIEESSNGVKNLVDEQHKLIKDLEDINKPKLSNAQMDEIQHIVESACECFDIDTSECEMELQLDYDKRVQVEHFDWSRCQEDLTQHIMDRLEDFFAVAEDKE*
Ga0098044_11367652	3300006754	Marine	MDKVQLENRVKELTVLIEESSNNVKSLVAEQASFTKRLDDLNKPKLSHAQMNEIQHIVEVACECFDIDTGECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIMNRLEDFFAVAEDEE*
Ga0098054_10242516	3300006789	Marine	VDNILNKRQMNREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLSKPKLSPAQFDEIHLMIEGACECFDICPDDCDIELELDWDNKIRVNEFDWSRRKEDLVQHIMDRMEEIFAVAEDEE*
Ga0098054_12924791	3300006789	Marine	MDKVQLENRIKELTVLIEESSNNVKSLVEEQAAFTKRLDDLNKPKLSPEQFDEIQHMIEGACECFDICLDDCDLELELDWDNKVQVNDFDWSRSKEDLVQHIMDRMEEIFAVTE
Ga0098054_13663591	3300006789	Marine	MDREQLENRVKELTVLIEESSNNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEINHIIEIACECFEIEVGECEMELQLDYDNRIQIDHFDWSRCQEDLTQHIMDRLEDFFAVGEEAKE*
Ga0098055_11051801	3300006793	Marine	VDNILNKRQMNREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLSKPKLSPAQFDEIHLMIEGACECFDICPDDCDIELELDWDNKIRVNEFDWSRKKEDLVQHIMDRMEEIFAVAEDEE*
Ga0098055_12976801	3300006793	Marine	VDNILNKRQMDREQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEINHIIESACECFDIDTSECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIMNRLEDFFAVAEDEE*
Ga0098055_13445682	3300006793	Marine	MDKVQLENRVKELTVLIEESSNNVKSLVAEQASFTKRLDDLNKPKLSHAQMNEIQHIVEVACECFDIDTGECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIIDRLEDFFAVAENKE*
Ga0098060_11921001	3300006921	Marine	EQLENRVKELTVLIEESSNGVKNLVDEQHKLIKDLEDINKPKLSNAQMDEINHIVEVACECFDIDTSECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIMNRLEDFFAVAEDEE*
Ga0098041_11017791	3300006928	Marine	MTREQLENRVKELTVLIEESSNNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEINHIIESACEVFEIEVGECDLELELDYDNRIQVNNFDWSRCQEDLTQHIMDRLEDSFAVAEDEE*
Ga0110931_10521362	3300007963	Marine	MDKVQLENRVKELTVLIEESSNGVKNLVDEQHKLIKDLEDINKPKLSNAQMDEIQHIVESACECFDIDTSECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIMDRLEDFFAVAEDKE*
Ga0098052_10622485	3300008050	Marine	MDKVQLENRIKELTVLIEESSNNVKSLVEEQAAFTKRLDDLNKPKLSPEQFDEIQHMIEGACECFDICLDDCDLELELDWDNKVQVNDFDWSRSKEDLVQHIMDRMEEIFAVTEDEE*
Ga0098052_11220421	3300008050	Marine	MDKVQLENRIKELTILIEESSNNVKSLVEEQAAFTKRLDDLNKPKLSPEQFDEIQHMIEGACESFDICLDDCDIELELDWDNKVRVNEFEWSRNAEDLVQHIMDRMEEIFAVTEDEE*
Ga0098052_12123311	3300008050	Marine	MDREQLENRVKELTVLIEESSNNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEINHIIETACECFEIEVGECEMELQLDYDNRIQIDHFDWSRCQEDLTQHIMDRLEDFFAVGEEAKE*
Ga0098052_12283902	3300008050	Marine	MDNILNKQQMDREQLENRVKELTVLIEEASGNVKNLVDEQNAFTKRLDDLNKPKLSPAKFDEVQHIIESACEVFDINVSECDIELELDYDNRVQVNHLDWSRVQEDLTQHIMDRLEEVFAVTEDEE*
Ga0098052_13522532	3300008050	Marine	MDKVQLENRIKELTILIEESSNNVKSLVEEQAAFTKRLDDLNKPKLSPAQFDEIQLMIEGACECFDICLDDCDLELELDWDNKVQVSDFDWSRSKEDLVQHIMDRMEEIFAVTEDEE*
Ga0114910_11133501	3300008220	Deep Ocean	MDKVQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQHIVESACETFDIDVSDCEYELQIDYDNRIQIDHLDWSRCQEELTQRIMDRLEKVFAVAEEE*
Ga0105350_1001879414	3300008224	Methane Seep Mesocosm	MEREQLENRIKELTVLIEESSNGVKNLVEEQAAFTKRLDDLDKPKLSPAQFDEIHEIIETALDRFELDPGNCEFELELDYDNRVQINHFDWSNVHRDLTQHIMDRMEEIFAVDEDEE*
Ga0114908_12736971	3300009418	Deep Ocean	MDKVQLENRIKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQHIVESACETFDLDVSDCELELELDYDNRVSVNHLDWSRCQEELTQRIMDRLENVFAVAEEEEEE*
Ga0114901_12020521	3300009604	Deep Ocean	VLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQHIVESACETFDIDVSDCELELELDYDNRVSVNHLDWSRCQEELTQRIMDSLENVFAVAEEEEEE*
Ga0114906_12104482	3300009605	Deep Ocean	MDKVQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHSQMDEIQHAVESACETFDLDVSDCELELELDYDNRVSVNHLDWSRCQEELTQRIMDRLENVFAVTEEE*
Ga0105228_1292521	3300009613	Marine Oceanic	VDNILNKQQMDREQLENRVKELTVLIEEASGNVKNLVDEQNAFTKRLDDLNKPKLSPAKFDELQHIVESACEVFELDVNDCEYELELDYDNRIQINHFDWSRVQEDLTQHIMDRMEEVFAVTEDKE*
Ga0105236_10132193	3300009619	Marine Oceanic	MDNILNKQQMDKVQLENRVKELTVLIEEASGNVKNLVDEQNAFTKRLDDLNKPKLSPAKFDELQHIVESACEVFELDVNDCEYELELDYDNRIQINHFDWSRVQEDLTQHIMDRMEEVFAVTEDKE*
Ga0098059_10867973	3300010153	Marine	MNREQLENRIKELTVLIEESSNGVKNLVDEQHKLIKDLEDINKPKLSNAQMDEIQHIVESACEVFELDANDCDLELEIDYDNRIQVNNFDWSRCQEDLTQHIMDRLEDFFAVAEDKE*
Ga0098059_11707812	3300010153	Marine	MTKEELENRIKELTVLIEEASGNVKNLVEEQNAFTKKLENLNKPKLSPAQFDEMQHIVEAACEMFDIEVSECDLELELDYDNRIQVNHLDWSRCQEDLTQHIMDRMEEIFAVTRDEE*
Ga0098059_12240401	3300010153	Marine	NVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEINHIIETACECFEIEVSECEMELQLDYDNRIQIDHFDWSRCQEDLTQHIMDRLEDFFAVGEDKE*
Ga0098059_13589731	3300010153	Marine	ENRVKELTVLIEESSNGVKNLVDEQHKLIKDLEDINKPKLSNAQMDEINHIVEVACECFDIDTSECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIMNRLEDFFAVAEDEE*
Ga0098059_13639611	3300010153	Marine	LTVLIEESSSNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQHIIESACECFDLDTNECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIIDRLEDFFAVVKNEG*
Ga0163179_103046183	3300012953	Seawater	MDKVQLENRVKELTVLIEEASGNVKKLVDEQAAFTKRLEDLNKPKLSHAQMDQVQHVIESACETFDIEIDDCDYNIEIDYDNRVAVNDFDWSRCQEELTQRIMDRLEKVFAVGDDVDVNVE*
Ga0181403_10093316	3300017710	Seawater	MDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDEIQHAVESACETFDLDVSDCELELELDYDNRVSVNNLDWSRCQEDLTESIMNRLEKVFAVAEEE
Ga0181383_10197201	3300017720	Seawater	MDKVQLENRVKELTVLIEEASSNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQEELTQRIMDRLEKVFAVAEDEE
Ga0181381_10384531	3300017726	Seawater	KVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQEDLTQRIMDRLEKVFAVAEDEE
Ga0181381_10654742	3300017726	Seawater	MDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDEIQHAVESACETFDIEIDECDYNIEIDYDNRVAVNDFDWSRCQEELTQRIMDRLEKVFAVAEEEQE
Ga0181401_10167671	3300017727	Seawater	VKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDEIQHAVESACETFDLDVSDCELELELDYDNRVSVNNLDWSRCQEDLTESIMNRLEKVFAVAEDEEKNVE
Ga0181396_11389101	3300017729	Seawater	MDNILNKQQMDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDEIQHIVESACECFEIEVGECDLELELDYDNRIQVNNIDWSRCQEDLTQHLMDRLEDF
Ga0181415_10681481	3300017732	Seawater	MDKVQLENRVKELTVLIEESSNSVKNLVAEQESFTKRLDDLNKPKLSHAQMDEIQHAVESACETFDIDVSDCELELELDYDNRVSVNNLDWSRCQEDLTESIMNRLEKVFAVAEDEE
Ga0181428_10101915	3300017738	Seawater	MDKVQLETRIKELTVLIEEASGNVKNLVDEQAAFTKRLEDLNKPKLSHAQMDQVQHIIESACEVFDLDVSECDYNIEIDYDNRIVVNDFDWSRCQEDLTQHIMDRLEEVFAVAEEEQE
Ga0181428_10152427	3300017738	Seawater	MDNNINDLLKLKHEFKSEEMDREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLNKPKLSHAQMDEIQHIVESACECFEIEVGECDLELELDYDNRIQVNHLDWSRCQEDLTQH
Ga0181433_10144446	3300017739	Seawater	MDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDEIQHAVESACETFDLDVSDCELELELDYDNRVSVNNLDWSRCQEDLTESIMNRLEKVFAVAEDEE
Ga0181433_10550702	3300017739	Seawater	MDKVQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQHAVESACEVFDLDISECDYNVEIDYDNRVVVNDFDWSRCQEELTERIMNRLEKVFAVAEDEE
Ga0181402_11549122	3300017743	Seawater	ENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQEELTQRIMDRLEKVFAVAEDEE
Ga0181397_11959522	3300017744	Seawater	MDNNINDLLKLKHEFKSEEMDREQLENRVKELTVLIEESSNSVKNLVAEQAAFTKRLDDLNKPKLSHAQMDEIQHIVESACECFEIEVGECDLELELDYDNRIQVNNIDWSRCQEDLTQHLMDR
Ga0181427_10634051	3300017745	Seawater	MDNNINDLLKLKHEFKSEEMDREQLENRVKELTVLIEESSNSVKNLVAEQAAFTKRLDDLNKPKLSHAQMDEIQHIVESACECFEIEVGECDLELELDYDNRIQVNNIDWSRCQEDLTQH
Ga0181393_10153373	3300017748	Seawater	MDNILNKQQMDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDQVQHVVESACEMFDMNVSDCELELELDYDNRVSVNNIDWSRCQEDLTHDIMNRLEKVFAVAEDEEKNVE
Ga0181405_10530793	3300017750	Seawater	MDKVQLENRVKELTVLIEEASSNVKNLVDEQAAFTKRLDDLNKPKLSHAQIDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQEELTQRIMDRLEKVFAVAEDEE
Ga0181407_10552412	3300017753	Seawater	MDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLDDLNKPKLSHAQMDEIQHAVELACETFDIEIDECDYNIEIDYDNRVTVNHFDWSRCQEELTQRIMDRLEKVFAVAEDEE
Ga0181411_10939901	3300017755	Seawater	MDKVQLENRVKELTVLIEEASSNVKNLVDEQAAFTKKLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQED
Ga0181411_11885062	3300017755	Seawater	MDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDQVQHVVESACEMFDMNVSDCELELELDYDNRVSVNNIDWSRCQEDLTHDIMNRLEKVFAVGDYVDVNV
Ga0181382_10784542	3300017756	Seawater	MDKVQLENRVKELTVLIEEASSNVKNLVDEQAAFTKKLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQEDLTQRIMDRLEKVFAVAEDEE
Ga0181414_10361544	3300017759	Seawater	MDKVQLENRVKELTVLIEEASGNVKNLVAEQESFTKRLDDLNKPKLSHAQMDEIQHAVESACETFDIDVSDCELELELDYDNRVSVNNLDWSRCQEDLTESIMNRLEKVFAVAEDEE
Ga0181408_10562764	3300017760	Seawater	MDKEQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEVQHIVEAACEVFELEVNDCEYELELDYDNRIQINHFDWSRVQEDLTQHI
Ga0181385_11711152	3300017764	Seawater	MDKEQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDQVQYAVESACETFDIEIDECDYNIEIDYDNRVTVNHFDWSRCQEELTQRIMDRLEKVFAVAEEEQE
Ga0181413_10140966	3300017765	Seawater	MDNNINDLLKLKHEFKSEEMDREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLNKPKLSHAQMDEIQHIVESACECFEIEVGECDLELELDYDNRIQVNNFDWSRCQEDLTQHLMDRLEDFFAVAED
Ga0181413_10305816	3300017765	Seawater	MDNILNKQQMDKVQLENRVKELTVLIEEASGNVKNLVAEQESFTKRLDDLNKPKLSHAQMDEIQHAVESACETFDIDVSDCELELELDYDNRVSVNNLDWSRCQEDLTESIMNRLEKVF
Ga0181413_10737551	3300017765	Seawater	MDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDQVQHVVESACEMFDMNVSDCELELELDYDNRVSVNNLDWSRCQEDLTESIMNRLEKV
Ga0181413_11176143	3300017765	Seawater	MDKVQLENRVKELTVLIEEASSNVKNLVDEQAAFTKKLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQEELTQRIMDRLEKVFAVAEDEE
Ga0181413_12692822	3300017765	Seawater	MDKEQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLDDLNKPKLSHAQMDEIQHAVESACETFDIEIDECDYNIEIDYDNRVTVNHFDWSRCQEELTQR
Ga0181406_10244543	3300017767	Seawater	MDKVQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDEIQHAVESACETFDLDVSDCELELELDYDNRVSVNNLDWSRCQEDLTESIMNRLEKVFAVAEDEEKNV
Ga0187220_11145233	3300017768	Seawater	MDKVQLENRVKELTVLIEEASSNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQE
Ga0187220_12317641	3300017768	Seawater	MDKEQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDQVQHIVESACEVFDINTSECDYSIEIDYDNRVTVNDFDWSRCQEDLTQHIMDRLEEVFAVAEEE
Ga0181430_12489011	3300017772	Seawater	MDKEQLENRVKELTVLIEEASGNVKNLVAEQAAFTKRLEDLNKPKLSHAQMDEIQHAVESACETFDLDVSDCELELELDYDNRVSVNNLDWSRCQEDLTESIMNRLEKVFAVAEEE
Ga0181395_10495173	3300017779	Seawater	MDKVQLENRVKELTVLIEEASSNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQEELTQRIMDRLEKVFAVAEEE
Ga0181380_10668571	3300017782	Seawater	KVQLENRVKELTVLIEEASNNVKNLVDEQAAFTKKLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQEDLTQRIMDRLEKVFAVAEDEE
Ga0181380_12143721	3300017782	Seawater	MDKVQLENGVKELTVLIEEASGNVKNLVAEQAAFTKRLDDLNKPKLSHAQMDEIQHAVESACETFDIEIDECDYNIEIDYDNRVTVNHFDWSRC
Ga0211677_1000688424	3300020385	Marine	VDNILNKRQMTKEQLENRVKELTVLIEESSNGVKNLVDEQHKLIKDLEDINKPKLSNAQMDEIQHIVESACEVFELDANDCDLELEIDYDNRIQVNNFDWSRCQEDLTQHIMDRLEDFFAVAEDKE
Ga0211577_1002233313	3300020469	Marine	MDKVQLENRIKELTVLIEEASSNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQYIVESACETFDINVSECDLELELDYDNRVSVNHLDWSRCQEELTQRIMDRLEKVFAVAEDEE
Ga0206678_104530121	3300021084	Seawater	MEREQLENRIKELTVLIEESSNGVKNLVEEQAAFTKRLNDLDKPKLSPAQFDEIHEIIETALDRFELDPGNCEYELELDYDNRVQINHFDWSNVHRDLTQHIMDRMEEIFAVDEDEE
Ga0206691_14638784	3300021342	Seawater	MEREQLENRIKELTVLIEESSNGVKNLVEEQAAFTKRLDDLNKPKLSPAQFDEIHEIIETALDRFELDPDNCEFELELDYDNRVRINHFEWSNIHRDLTQHIMDRMEEIFAVDEDEE
Ga0222717_102086794	3300021957	Estuarine Water	MDKEQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSPAQMDHVQHIIESVCECFEIDTNECEMELQIDYDNRIQVENMDWSRCQEELTQRIMDRLEEVFAVDEEDEE
Ga0222716_101358766	3300021959	Estuarine Water	MDNNINDLLKLKHEFKSEEMDREQLENRVKELTVLIEESSNSVKNLVAEQAAFTKRLDDLNKPKLSHAQMDEIQHIVESACECFEIEVGECDLELELDYDNRIQVNNIDWSRCQEDLTQHLMDRLEDFFAVAED
Ga0224906_10545284	3300022074	Seawater	MDKVQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDEIQHIVESACETFDMNVSDCELELELDYDNRVSVNNLDWSRCQEDLTESIMNRLEKVFAVAEDEE
Ga0208669_10170926	3300025099	Marine	VLIEESSNGVKNLVDEQHKLIKDLEDINKPKLSNAQMDEINHIVEVACECFDIDTSECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIMNRLEDFFAVAEDEE
Ga0208013_10292531	3300025103	Marine	VDNILNKRQMNREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLSKPKLSPAQFDEIHLMIEGACECFDICPDDCDIELELDWDNKIRVNEFDWSRRKEDLVQHIMDRMEEIFAVAEDEE
Ga0208013_10524221	3300025103	Marine	MDKVQLENRVKELTVLIEESSNNVKSLVAEQASFTKRLDDLNKPKLSHAQMNEIQHIVEVACECFDIDTGECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIMNRLEDFFAVAEDEE
Ga0208793_10865853	3300025108	Marine	VDNILNKRQMNREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLSKPKLSPAQFDEIHLMIEGACECFDICPDDCDIELELDWDNKIRVNEFDWSRKKEDLVQHIMDRMEEIFAVAEDEE
Ga0209348_11673151	3300025127	Marine	MNREQLENRIKELTVLIEEASGNVKNLVDEQAAFTKRLEDLNKPKLSHAQMDQVQHIVESTCETFDIDVSECDLELELDYDNRVSVNHLDWSRCQEELTQRIMDRLENVFAVGDDVDVM
Ga0209348_11903021	3300025127	Marine	KELSVLIEEASGNVKKLVDEQAAFNKKLDDLDKPKLTYAQMDKLQHVIESAVEVFSIDIDDCDYNIEINYDNRVEVNDFDWSRCQEDLTTCIMERLENVFAVAEDEE
Ga0208919_11365353	3300025128	Marine	VDNILNKRQMTKEQLENRVKELTVLIEESSNGVKNLVDEQHKLIKDLEDINKPKLSNAQMDEIQHIVESACECFDIDTSECEMELQLDYDNRVQVEHFDWSRCQEDLTQHIMDRLEDFFAVAEDKE
Ga0209128_100005873	3300025131	Marine	MNREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLSKPKLSPAQFDEIHLMIEGACECFDICPDDCDIELELDWDNKVRVNEFDWSRSKEDLVQHIMDRMEEIFAVAEDKE
Ga0208299_10529821	3300025133	Marine	MDKVQLENRIKELTVLIEESSNNVKSLVEEQAAFTKRLDDLNKPKLSPEQFDEIQHMIEGACECFDICLDDCDLELELDWDNKVQVNDFDWSRSKEDLVQHIMDRMEEIFAVTEDEE
Ga0208299_10791841	3300025133	Marine	MDKVQLENRIKELTILIEESSNNVKSLVEEQAAFTKRLDDLNKPKLSPAQFDEIQLMIEGACECFDICLDDCDLELELDWDNKVQVSDFDWSRSKEDLVQHIMDRMEEIFAVTEDEE
Ga0208299_12121811	3300025133	Marine	MDKVQLENRIKELTALIEESSNNVKSLVEEQAAFTKRLDDLNKPKLSPEQFDEIQHMIEGACESFDICLDDCDIELELDWDNKVRVNEFEWSRNAEDLVQHIMDRMEEIFAVTEDEE
Ga0209756_100099820	3300025141	Marine	VDNILNKRQMNREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLSKPKLSPAQFDEIHLMIEGACECFDICPDDCDIELELDWDNKVRVNEFDWSRSKEDLVQHIMDRMEEIFAVAEDKE
Ga0209337_100085119	3300025168	Marine	MDKVQLENRVKELTVLIEESSNNVKNLVEEQNSFTKRLDDLNKPKLSPAKFDELQHIVESACEVFELEVNDCEYELELDYDNRIQINHFDWSRCQEDLTQHIMDRMESVFAVTEDEE
Ga0209337_10201844	3300025168	Marine	VDNILNKQQMDREQLENRVKELTVLIEESSNGVKNLVDEQAAFTKRLDDLNKPKLSHAQMDQVQHIIESVCECFDIEVSECDLELEIDYDNRIQVNHLDWSRCQEELTQRIMDRLEEVLAVAEED
Ga0209337_10249838	3300025168	Marine	VDNILNKQQMDKEQLENRVKELTVLIEESSNNVKNLVDEQAAFTKRLNDLNKPKLSHAQMDEVQHIVESACEVFDLNISECDMELELDYDNRVQVNHLDWSRCQEDLTQHIMDRLEEVFAVAEEDEE
Ga0209337_10332535	3300025168	Marine	MDKEQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSPAQMDEVQHVVESACEVFDLDIDECDYNLEIDYDNRVQVNDIDWSRCQENLTQHIMDRLEEVFAVDEEDEE
Ga0209495_10880001	3300025639	Methane Seep Mesocosm	MEREQLENRIKELTVLIEESSNGVKNLVEEQAAFTKRLDDLDKPKLSPAQFDEIHEIIETALDRFELDPGNCEFELELDYDNRVQINHFDWSNVHRDLTQH
Ga0208453_1104931	3300026113	Marine Oceanic	VDNILNKQQMDREQLENRVKELTVLIEEASGNVKNLVDEQNAFTKRLDDLNKPKLSPAKFDELQHIVESACEVFELDVNDCEYELELDYDNRIQINHFDWSRVQEDLTQHIMDRMEEVFAVTEDKE
Ga0208560_10049314	3300026115	Marine Oceanic	MDNILNKQQMDKVQLENRVKELTVLIEEASGNVKNLVDEQNAFTKRLDDLNKPKLSPAKFDELQHIVESACEVFELDVNDCEYELELDYDNRIQINHFDWSRVQEDLTQHIMDRMEEVFAVTEDKE
Ga0183683_10013875	3300029309	Marine	MNKEQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHAQMDQVQHIVESACEVFDLDIDECDYNIEIDYDNRVVVNDFDWSRCQEDLTTHIMERLENVFAVAEEE
Ga0183755_10175945	3300029448	Marine	MDKVQLENRVKELTVLIEEASGNVKNLVAEQESFTKRLDDLNKPKLSHAQMDEIQHIVESACETFDIDVSDCELELELDYDNRVSVNHLDWSRCQEELTQRIMDRLENVFAVAEEEE
Ga0183757_100425813	3300029787	Marine	MDKVQLENRVKELTVLIEEASGNVKNLVDEQAAFTKRLDDLNKPKLSHSQMDEIQHAVESACETFDLDVSDCELELELDYDNRVSVNHLDWSRCQEELTQRIMDRLENVFAVAEEENVE
Ga0315315_104004231	3300032073	Seawater	MDNNINDLLKLKHEFKSEEMDREQLENRVKELTVLIEESSNGVKNLVAEQAAFTKRLDDLNKPKLSHAQMDEIQHIVESACECFEIEVGECDLELELDYDNRIQVNNIDWSRCQEDLTQHLMDRLEDFFAVAED

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098234

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences