Metagenome / Metatranscriptome Family F098157

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098157
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	108 residues
Representative Sequence	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCSGSQPKVPGR
Number of Associated Samples	87
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	59.22 %
% of genes near scaffold ends (potentially truncated)	27.88 %
% of genes from short scaffolds (< 2000 bps)	81.73 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.769 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.846 % of family members)
Environment Ontology (ENVO)	Unclassified (37.500 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.962 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.22% β-sheet: 0.00% Coil/Unstructured: 35.78%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01182	Glucosamine_iso	45.19
PF10128	OpcA_G6PD_assem	5.77
PF08044	DUF1707	4.81
PF02254	TrkA_N	0.96
PF13424	TPR_12	0.96
PF00924	MS_channel	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0363	6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase	Carbohydrate transport and metabolism [G]	45.19
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.96
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.77 %
All Organisms	root	All Organisms	44.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.77 %
cellular organisms	root	All Organisms → cellular organisms	44.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.77 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.77 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	44.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.77 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.77 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	17.31 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.77 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	5.77 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.77 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	0.96 %
Actinokineospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.77 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2.88 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Actinokineospora diospyrosa	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora diospyrosa	0.96 %
Nonomuraea wenchangensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea wenchangensis	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004092\|Ga0062389_101037318	Not Available	1005	Open in IMG/M
3300004152\|Ga0062386_100241135	Not Available	1431	Open in IMG/M
3300005434\|Ga0070709_10013580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4583	Open in IMG/M
3300005435\|Ga0070714_100260318	Not Available	1606	Open in IMG/M
3300005435\|Ga0070714_101699756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300005445\|Ga0070708_101525611	Not Available	622	Open in IMG/M
3300005468\|Ga0070707_100696462	Not Available	979	Open in IMG/M
3300005602\|Ga0070762_11177207	Not Available	530	Open in IMG/M
3300005610\|Ga0070763_10175309	Not Available	1132	Open in IMG/M
3300005764\|Ga0066903_108852365	Not Available	511	Open in IMG/M
3300005921\|Ga0070766_10445075	Not Available	854	Open in IMG/M
3300006028\|Ga0070717_11043619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	744	Open in IMG/M
3300006163\|Ga0070715_10028426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2243	Open in IMG/M
3300006176\|Ga0070765_100098669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2518	Open in IMG/M
3300009698\|Ga0116216_10983738	Not Available	504	Open in IMG/M
3300010048\|Ga0126373_10974245	Not Available	913	Open in IMG/M
3300010361\|Ga0126378_13034209	Not Available	535	Open in IMG/M
3300010376\|Ga0126381_104609450	Not Available	531	Open in IMG/M
3300010379\|Ga0136449_100590359	Not Available	1897	Open in IMG/M
3300010379\|Ga0136449_101066248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1291	Open in IMG/M
3300011120\|Ga0150983_15664328	Not Available	563	Open in IMG/M
3300017924\|Ga0187820_1044650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1186	Open in IMG/M
3300017926\|Ga0187807_1033405	Not Available	1594	Open in IMG/M
3300017937\|Ga0187809_10085980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1042	Open in IMG/M
3300017942\|Ga0187808_10355336	Not Available	666	Open in IMG/M
3300017955\|Ga0187817_10853444	Not Available	582	Open in IMG/M
3300018006\|Ga0187804_10591070	Not Available	504	Open in IMG/M
3300020579\|Ga0210407_10173968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea wenchangensis	1667	Open in IMG/M
3300020580\|Ga0210403_10300498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1315	Open in IMG/M
3300020580\|Ga0210403_10389093	Not Available	1139	Open in IMG/M
3300020581\|Ga0210399_10233984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1530	Open in IMG/M
3300020581\|Ga0210399_10234877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1527	Open in IMG/M
3300021088\|Ga0210404_10749149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300021171\|Ga0210405_10885348	Not Available	679	Open in IMG/M
3300021178\|Ga0210408_11068208	Not Available	622	Open in IMG/M
3300021181\|Ga0210388_10946861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	740	Open in IMG/M
3300021402\|Ga0210385_10931810	Not Available	667	Open in IMG/M
3300021405\|Ga0210387_11099042	Not Available	693	Open in IMG/M
3300021405\|Ga0210387_11519239	Not Available	572	Open in IMG/M
3300021406\|Ga0210386_10007158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8903	Open in IMG/M
3300021406\|Ga0210386_10414560	Not Available	1161	Open in IMG/M
3300021407\|Ga0210383_11541518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300021420\|Ga0210394_11100242	Not Available	685	Open in IMG/M
3300021433\|Ga0210391_10211588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1524	Open in IMG/M
3300021475\|Ga0210392_10011465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4764	Open in IMG/M
3300021475\|Ga0210392_10183606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1451	Open in IMG/M
3300021560\|Ga0126371_13715900	Not Available	515	Open in IMG/M
3300022513\|Ga0242667_1032130	Not Available	603	Open in IMG/M
3300022529\|Ga0242668_1099528	Not Available	588	Open in IMG/M
3300022714\|Ga0242671_1130050	Not Available	504	Open in IMG/M
3300022715\|Ga0242678_1088105	Not Available	503	Open in IMG/M
3300024222\|Ga0247691_1022615	Not Available	981	Open in IMG/M
3300025898\|Ga0207692_10372933	Not Available	884	Open in IMG/M
3300025905\|Ga0207685_10014846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2449	Open in IMG/M
3300025915\|Ga0207693_10031030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	4222	Open in IMG/M
3300025916\|Ga0207663_10834026	Not Available	735	Open in IMG/M
3300025922\|Ga0207646_11821108	Not Available	520	Open in IMG/M
3300025928\|Ga0207700_11569852	Not Available	583	Open in IMG/M
3300025929\|Ga0207664_10187981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1777	Open in IMG/M
3300026489\|Ga0257160_1047124	Not Available	740	Open in IMG/M
3300027029\|Ga0208731_1001869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1764	Open in IMG/M
3300027106\|Ga0208607_101586	Not Available	929	Open in IMG/M
3300027297\|Ga0208241_1079788	Not Available	525	Open in IMG/M
3300027812\|Ga0209656_10098644	Not Available	1538	Open in IMG/M
3300027884\|Ga0209275_10036494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2297	Open in IMG/M
3300027889\|Ga0209380_10007594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6438	Open in IMG/M
3300027895\|Ga0209624_10065761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2334	Open in IMG/M
3300027908\|Ga0209006_10356665	Not Available	1238	Open in IMG/M
3300027911\|Ga0209698_10757435	Not Available	736	Open in IMG/M
3300030730\|Ga0307482_1087953	Not Available	830	Open in IMG/M
3300030814\|Ga0265741_111041	Not Available	635	Open in IMG/M
3300031231\|Ga0170824_128355299	Not Available	949	Open in IMG/M
3300031474\|Ga0170818_100349957	Not Available	763	Open in IMG/M
3300031543\|Ga0318516_10640027	Not Available	606	Open in IMG/M
3300031544\|Ga0318534_10293246	Not Available	937	Open in IMG/M
3300031708\|Ga0310686_100477720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3845	Open in IMG/M
3300031715\|Ga0307476_10034127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3401	Open in IMG/M
3300031715\|Ga0307476_10048278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2893	Open in IMG/M
3300031754\|Ga0307475_10794970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	751	Open in IMG/M
3300031770\|Ga0318521_10409455	Not Available	809	Open in IMG/M
3300031962\|Ga0307479_11606543	Not Available	605	Open in IMG/M
3300032001\|Ga0306922_10766788	Not Available	1011	Open in IMG/M
3300032066\|Ga0318514_10436213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300032160\|Ga0311301_11352489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300032261\|Ga0306920_101067871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300032770\|Ga0335085_10485387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1413	Open in IMG/M
3300032783\|Ga0335079_10529447	Not Available	1253	Open in IMG/M
3300032805\|Ga0335078_10400130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1803	Open in IMG/M
3300032893\|Ga0335069_10450910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1501	Open in IMG/M
3300032895\|Ga0335074_10019881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9471	Open in IMG/M
3300032895\|Ga0335074_10033626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7170	Open in IMG/M
3300032895\|Ga0335074_10496024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Actinokineospora → Actinokineospora diospyrosa	1270	Open in IMG/M
3300032895\|Ga0335074_10636460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1051	Open in IMG/M
3300032896\|Ga0335075_10006928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	17477	Open in IMG/M
3300032896\|Ga0335075_10061219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5171	Open in IMG/M
3300032896\|Ga0335075_10960550	Not Available	773	Open in IMG/M
3300032954\|Ga0335083_10761373	Not Available	780	Open in IMG/M
3300032954\|Ga0335083_11114158	Not Available	616	Open in IMG/M
3300032955\|Ga0335076_10065488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3584	Open in IMG/M
3300032955\|Ga0335076_10236048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1724	Open in IMG/M
3300033134\|Ga0335073_10332590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1808	Open in IMG/M
3300033134\|Ga0335073_10345615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1764	Open in IMG/M
3300033134\|Ga0335073_11511887	Not Available	647	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	90.38%
Aquatic	Environmental → Aquatic	9.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.38%
Freshwater	Environmental → Aquatic → Freshwater	8.65%
Sediment	Environmental → Aquatic → Sediment	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.12%
Loam	Environmental → Terrestrial → Soil → Loam	25.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	17.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	37.50%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	17.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.62%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.58%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022715	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027106	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF031 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030814	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062389_1010373182	3300004092	Bog Forest Soil	MLSRIADELAKTAPVLVSFLHIFNRLASGEDMPRRRPLRRLRRLRKKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSAAGAQSTCTASSLLLPGCSGSQPKVPGR*
Ga0062386_1002411351	3300004152	Bog Forest Soil	LSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEDMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCGGSQAKVPGR*
Ga0070709_100135802	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LSLNARELRTLSRISEEFAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSRAGAQSTCTASSLLLPGCDGSPAKVPGQR*
Ga0070714_1002603182	3300005435	Agricultural Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPQRRPLRRLRRLRRKLSTTALTWMFVGIWSSVTAGMLAFALVMTYTGQTSGAGTQSTCTASSVLLSGCSGSQPKVPGR*
Ga0070714_1016997561	3300005435	Agricultural Soil	NARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQASGAGAQRSCTASSLLLPGCDGRR*
Ga0070708_1015256111	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SRIADELAKTAPILVSFLHIFNRLASGEDMPQRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTSQTSGAGAQSTCTASSILLSGCSGSQAKVPGGR*
Ga0070707_1006964621	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LTKEAPLSLNERELRTLSRIADELAKTAPILVSFLHIFNRLASGEDMPQRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTSQTSGAGAQSTCTASSILLSGCSGSQAKVPGGR*
Ga0070762_111772071	3300005602	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAQSTCTASSVLLSGCSASQSKVPGR*
Ga0070763_101753092	3300005610	Soil	VSFLHIFNRLASGEDMPQRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCSGSQPKVPGR*
Ga0066903_1088523651	3300005764	Tropical Forest Soil	RELRALSRISDELAKTAPALVSFLHIFNRLTSGEHMPQRPPLRRLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGQTSRAGAQSSCTASSLLLPGCDSSQAKPPGR*
Ga0070766_104450752	3300005921	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGEAQSTCTASSVLLSGCSASQSKVPRR*
Ga0070717_110436192	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQASGAGAQRSCTASSLLLPGCDGRR*
Ga0070715_100284262	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	LSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSRAGAQSTCTASSLLLPGCDGSPAKVPGQR*
Ga0070765_1000986693	3300006176	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAQSTCTASSVLLSGCSASQSKVPGR*
Ga0116216_109837381	3300009698	Peatlands Soil	EETALSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEDMPSRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCGGSQAKVPGR
Ga0126373_109742452	3300010048	Tropical Forest Soil	MNERELRTLGRIADELAKTAPALVSFLHIFNRLAHGEAMPPRRPLRRLRKLRRKLSTTALTWMFVGIWSCVTAGMLTFALVMTYTGQGTAAGAGSTCSASSVLLPGCTSQPKAPGR*
Ga0126378_130342091	3300010361	Tropical Forest Soil	MNERELRTLGRIADELAKTAPALVSFLHIFNRLAHGEAMPPRRPLRRLRKLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQGTAAGAGSTCSASSVLLPGCTSQPKAPGR*
Ga0126381_1046094501	3300010376	Tropical Forest Soil	MNERELRTLGRIADELAKTAPALVSFLHIFNRLAHGEAMPPRRPLRRLRKLRRRLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQGTAAGAWSTCSASSVLLP
Ga0136449_1005903593	3300010379	Peatlands Soil	LSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEDMPSRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGQTSGAGAQSACTASSLLLPGCGGSQAKVPGR*
Ga0136449_1010662482	3300010379	Peatlands Soil	VLVSFLHIFNRLASGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLSGCSGSQPKVPGR*
Ga0150983_156643281	3300011120	Forest Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAGAQSTCTASSLLLPGCSDSQPNVPGR*
Ga0187820_10446502	3300017924	Freshwater Sediment	LSLNARELRTLSRISEELAKTAPVLVSLLHIFNRLASGEAMPSRRPLRRLRRKLSTTTLTWMFVGIWSCVTAGMLAFALVMTYTGQASGAGAQSTCTASSLLLPGCGGSQAKVPGR
Ga0187807_10334052	3300017926	Freshwater Sediment	VLVSFLHIFNRLTSGEDMPQRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPECSGSQPKESGR
Ga0187809_100859802	3300017937	Freshwater Sediment	LSLNARELRTLSRISEELAKTAPVLVSLLHIFNRLASGEDMPSRRPLRRLRRLRRKLSTTTLTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCGGSQAKVPGR
Ga0187808_103553362	3300017942	Freshwater Sediment	VLVSLLHIFNRLASGEDMPSRRPLRRLRRLRRKLSTTTLTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCGGSQAKVPGR
Ga0187817_108534442	3300017955	Freshwater Sediment	LAKTAPVLVSLLHIFNRLASGEDMPSRRPLRRLRRLRRKLSTTTLTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPECSGSQPKVPGR
Ga0187804_105910701	3300018006	Freshwater Sediment	LSLNARELRTLSRISEELAKTAPVLVSLLHIFNRLASGEDMPSRRPLRRLRRLRRRLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCG
Ga0210407_101739682	3300020579	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAQSTCTASSILLSGCSASQSKVPGR
Ga0210403_103004982	3300020580	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCSGSQSNVPGR
Ga0210403_103890931	3300020580	Soil	IAPRHEEPPLSLNARELRTLSRISEELAKTAPVLVSLLHIFNRLTSGEDMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSRAGAQSTCTASSLLLPGCDGGQAKAPGR
Ga0210399_102339842	3300020581	Soil	VLVSFLHIFNRLASGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSSVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCSGSQ
Ga0210399_102348772	3300020581	Soil	MNARELRTLSRISEELAKTAPVLVSLLHIFNRLTSGEAMPSRRPLRRLRRLRRKLSTTTLTWMFVGIWSCVTAGLLAFALVMTYTGQTSRAGAQSTCTASSLLLPGCDGGQAKVPGR
Ga0210404_107491492	3300021088	Soil	TLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCSGSQPKVPGR
Ga0210405_108853482	3300021171	Soil	MNARELRTLSRISEELAKTAPVLVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTTLTWVFVGIWSCVTAGLLAFALVMTYTGQTSRAGAQSTCTASSLLLPGCDGGQAKVPGR
Ga0210408_110682081	3300021178	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPAGGAGARSTCTASSILLSGCSASQSKVPGR
Ga0210388_109468611	3300021181	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAGAQSTCTASSILLSGCSASQSKVPRR
Ga0210385_109318101	3300021402	Soil	VLVSFLHIFNRLASGEDMPQRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCSGSQPKVPGR
Ga0210387_110990422	3300021405	Soil	VLVSFLHIFNRLASGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCSGSQSNVPGR
Ga0210387_115192391	3300021405	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGARAQTTCAASTILLSGCSASQSKVPGR
Ga0210386_100071582	3300021406	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAGARSTCTASSILLSGCSASQSKVPGR
Ga0210386_104145601	3300021406	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGARAQTTCAASTILLSGCSASQSKVPGR
Ga0210383_115415181	3300021407	Soil	AKTAPVLVSFLHIFNRLASGEDMPQRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGPTAGAGAQSTCTASSTLLSGCSGSQSKVPGR
Ga0210394_111002421	3300021420	Soil	LRTLSRISEELAKTAPVLVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTTLTWVFVGIWSCVTAGLLAFALVMTYTGQTSRAGAQSTCTASSLLLPGCDGGQAKVPGR
Ga0210391_102115882	3300021433	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAQSTCTASSVLLSGCSASQSKVPGR
Ga0210392_100114655	3300021475	Soil	VLVSFLHIFNRLASGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSSVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCDGGQAKAPGR
Ga0210392_101836061	3300021475	Soil	APVLVSFLHIFNRLASGEDMPPRRPLRRLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGARAQTTCAASTILLSGCSASQSKVPGR
Ga0210402_114127782	3300021478	Soil	VRTLSRIADELARTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPAGGAQSTCTAS
Ga0126371_137159001	3300021560	Tropical Forest Soil	PALVSFLHIFNRLAHGEAMPPRRPLRRLRKLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQGTAAGAGSTCSASSVLLPGCTSQPKAPGR
Ga0242667_10321301	3300022513	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAGAQNTCTASSILLSGCSASQSKVPGR
Ga0242668_10995282	3300022529	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGVAGARSTCTASSILLSGCSASQSKVPGR
Ga0242671_11300502	3300022714	Soil	DELAKTAPVLVSFLHIFNRLASGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCSGSQSNVPGR
Ga0242678_10881051	3300022715	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPQRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGARAQTTCAASTILLSGCSASQSKVPGR
Ga0247691_10226152	3300024222	Soil	LSLNARELRTLSRISEEFAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSRAGAQSTCAASSLLLPGCDGSPAKVPGQR
Ga0207692_103729332	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	RISEEFAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQASGAGAQRSCTASSLLLPGCDGRR
Ga0207685_100148462	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	LSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQASGAGAQRSCTASSLLLPGCDGRR
Ga0207693_100310304	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPQRRPLRRLRRLRRKLSTTALTWMFVGIWSSVTAGMLAFALVMTYTGQTSGAGTQSTCTASSVLLSGCSGSQPKVPGR
Ga0207663_108340262	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPQRRPLRRLRRLRRKLSTTALTWMFVGIWSSVTAGMLAFALVMTYTSQTSGAGAQSTCTASSLLLPGCDGSPAKVPGQR
Ga0207646_118211081	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AFLGRRPPARPEGASPGLTKEAPLSLNERELRTLSRIADELAKTAPILVSFLHIFNRLASGEDMPQRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTSQTSGAGAQSTCTASSILLSGCSGSQAKVPGGR
Ga0207700_115698522	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PILVSFLHIFNRLASGEDMPQRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTSQTSGAGAQSTCTASSILLSGCSGSQAKVPGGR
Ga0207664_101879812	3300025929	Agricultural Soil	LTKEAPLSLNERELRTLSRIADELAKTAPILVSFLHIFNRLASGEDMPQRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTSQTSGAGAQSTCTASSILLSGCSGSQAKVPGGR
Ga0257160_10471242	3300026489	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPQRRPLRRLRRLRRKLSTTALTWMFVGIWSSVTAGMLAFALVMTYTGQTGGAGAQSTCTASSVLLSGCSGSQAKVPGR
Ga0208731_10018692	3300027029	Forest Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGRTQSTCTASSILLSGCSASQPKVPGR
Ga0208607_1015862	3300027106	Forest Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAQSTCTASSVLLSGCSASQSKVPGR
Ga0208241_10797882	3300027297	Forest Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPQRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGPTGGAGAQSTCTASSILLSGCSASQSKVPRR
Ga0209656_100986442	3300027812	Bog Forest Soil	LSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEDMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCGGSQAKVPGR
Ga0209275_100364942	3300027884	Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCSGSQPKVPGR
Ga0209380_100075942	3300027889	Soil	VLVSFLHIFNRLASGEDMPQRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCSGGQPKVPGR
Ga0209624_100657613	3300027895	Forest Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAQSTCTASSILLSGCSASQSKVPGR
Ga0209006_103566651	3300027908	Forest Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAQSTCTASSILLSGCSASQSKVAGR
Ga0209698_107574351	3300027911	Watersheds	LSLNARELRTLSRISEEFAKTAPALVSLLHIFNRLTSGEDMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLTGCSGSQAKVPGR
Ga0307482_10879532	3300030730	Hardwood Forest Soil	LSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSRAGAQSTCTASSLLLPGCSGSQPKVPGR
Ga0265741_1110411	3300030814	Soil	LSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAQSTCTASSILLSGCSASQSKVPGR
Ga0170824_1283552991	3300031231	Forest Soil	VRTLSRIADELAKTAPMLVSFLHIFNRLAPGEDMPQRRPLRRLRRLRRKLSTTALTWMFVGIWSSVTAGMLAFALVMTYTGQTSGAGAQSTCTASSVLLSGCSGSQPKVPGR
Ga0170818_1003499571	3300031474	Forest Soil	VRTLSRIADELAKTAPMLVSFLHIFNRLAPGEDMPQRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSVLLSGCSGSQPKVPGR
Ga0318516_106400271	3300031543	Soil	VSFLHIFNRLTSGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGPTSGAGAQNTCTASSLLLPGCGSSTQKVSGR
Ga0318534_102932462	3300031544	Soil	VSFLHIFNRLTSGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGPTSGAGAQNTCTASSLLLPGCGSSTQKVAGR
Ga0310686_1004777203	3300031708	Soil	VRTLSRIADELAKTAPLLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAQSTCTASSILLSGCSASQSKVPGR
Ga0307476_100341272	3300031715	Hardwood Forest Soil	VRTLSRIADELAKTAPVLVSFLHIFNRLASGEDMPPRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGPTGGAGAQSTCTASSILLSGCSAGQSKAPGR
Ga0307476_100482784	3300031715	Hardwood Forest Soil	LSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSRAGAQSTCTASSLLLPGCGGGQAKVPGR
Ga0307475_107949702	3300031754	Hardwood Forest Soil	MNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQASGAGAQRSCTASSLLLPGCDGRR
Ga0318521_104094552	3300031770	Soil	AFLGRRLLTPRHEETALSLTERELRALSRISDELAKTAPALVSFLHIFNRLTSGEDMPKRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMSYTTPPSGAGAQTTCTASSLLLPGCGSSTQKVSGR
Ga0307479_116065431	3300031962	Hardwood Forest Soil	LTKEAPLSLNERELRTLSRIADELAKTAPILVSFLHIFNRLASGEDMPQRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTSQTSGAGAQST
Ga0306922_107667882	3300032001	Soil	PSREDGRITPRHEEAPLSLNERELRTLSRIADELAKTAPALVSFLHIFNRLTSGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGPTSGAGAQNTCTASSLLLPGCGSSTQKVAGR
Ga0318514_104362132	3300032066	Soil	ITPRHEETALSLNERELRTLSRISDELAKTAPALVSFLHIFNRLTSGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGPTSGAGAQNTCTASSLLLPGCGSSTQKVAGR
Ga0311301_113524892	3300032160	Peatlands Soil	VLVSFLHIFNRLASGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCGGSQAKVPGR
Ga0306920_1010678712	3300032261	Soil	VSFLHIFNRLTSDEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGPTSGAGAQNTCTASSLLLPGCGSSTQKVAGR
Ga0335085_104853872	3300032770	Soil	LSLNARELRTLSRISEELAKTAPVLVSLLHIFNRLSSGEDMPSRRPLRRLRRKLSTTTLTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCDSSQAKVPRR
Ga0335079_105294472	3300032783	Soil	ELRTLSRISEELAKTAPVLVSLLHIFNRLSSGEDMPSRRPLRRLRRKLSTTTLTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCDSSQAKVPRR
Ga0335078_104001302	3300032805	Soil	LSLNARELRTLSRISEELAKTAPVLVSLLHIFNRLASGEDMPQRRPLRRLRRLRRKLSTTTLTWMFVGIWSCVTAGMLAFALVMTYTGQASGARAQSTCTASSLLLPGCGGSQANVPGR
Ga0335069_104509102	3300032893	Soil	LSLNARELRTLSRISEELAKTAPVLVSLLHIFNRLASGEDMPSRRPLRRLRRLRRKLSTTTLTWMFVGIWSCVTAGMLAFALVMTYTGQTSRAGSQSTCTASSLLLPGCGGSQANAPGR
Ga0335074_100198814	3300032895	Soil	LSLNARELRTLSRISEELAKTAPVLVSLLHIFNRLASGEDMPQRRPLRRLRRLRRKLSTTTLTWMFVGIWGCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCGGSQAKVPGR
Ga0335074_100336266	3300032895	Soil	LRTLSRIADEFAKTAPALVSFLHMFNRLASGEDMPRRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQGAAAGAGSSCSASSVLLPACGAQPKDPGH
Ga0335074_104960242	3300032895	Soil	VSFLHIFNRLTSGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQSTAAGAGSSCSASSVLLPACGSQPKAPGR
Ga0335074_106364602	3300032895	Soil	VSFLHIFNRLTSGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYSGPASGAGAQNTCTASSLLLPGCGSTTQKASGR
Ga0335075_100069284	3300032896	Soil	VSFLHIFNRLASGEDMPRRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQGAAAGAGSSCSASSVLLPACGDQPKVPGH
Ga0335075_100612194	3300032896	Soil	VSFLHIFNRLSSGEAMPPRRPLRRLRRLRKRLSTTALTWMFVGIWSFVTAGMLSFALVMTYTGPTSGAGAQSTCTASSLLLPGCGGSQARVPGR
Ga0335075_109605501	3300032896	Soil	VSFLHIFNRLTSGEDMPKRRPLRRLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTGGAGAQNTCTASSLLLPGC
Ga0335083_107613731	3300032954	Soil	LSLNARELRTLSRISEELAKTAPVLVSLLHIFNRLASGEDMPRRRPLRRLRRLRRKLSTTTLTWMFVGIWGCVTAGMLAFALVMTYTGQASGTRAQSTCTASSLLLP
Ga0335083_111141582	3300032954	Soil	SRISEELAKTAPVLVSLLHIFNRLSSGEDMPSRRPLRRLRRKLSTTTLTWMFVGIWSCVTAGMLAFALVMTYTGQTSGAGAQSTCTASSLLLPGCDSSQAKVPRR
Ga0335076_100654883	3300032955	Soil	LSLNARELRTLSRISEELAKTAPVLVSLLHIFNRLASGEDMPRRRPLRRLRRLRRKLSTTTLTWMFVGIWGCVTAGMLAFALVMTYTGQASGTRAQSTCTASSLLLPGCADSQAHVPGR
Ga0335076_102360482	3300032955	Soil	LSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEDMPSRRPLRRLRRKLSTTALTWMFVGIWGCVTAGMLAFALVMTYTGQTSGAGAQSSCTASSLLLPGCGGSQAKVSGR
Ga0335073_103325902	3300033134	Soil	LSLNARELRTLSRISEELAKTAPALVSLLHIFNRLTSGEAMPSRRPLRRLRRLRRRLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQTGEAGAQNTCTASSLLLPGCGGSQAKVPGR
Ga0335073_103456153	3300033134	Soil	LRTLSRIADEFAKTAPALVSFLHIFNRLASGEDMPRRRPLRRLRRKLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGQGAAAGAGSSCSASSVLLPACGAQPKVPGH
Ga0335073_115118872	3300033134	Soil	VSFLHIFNRLTFGEAMPVRRPLRRLRRLRKRLSTTALTWMFVGIWSCVTAGMLAFALVMTYTGPGQASGTGAQSTCSASDLLLP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098157

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences