Metagenome / Metatranscriptome Family F098100

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F098100
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	92 residues
Representative Sequence	MTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWPIWLLFNHFPPCYYLHNCE
Number of Associated Samples	96
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	64.42 %
% of genes near scaffold ends (potentially truncated)	30.77 %
% of genes from short scaffolds (< 2000 bps)	79.81 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (87.500 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (24.038 % of family members)
Environment Ontology (ENVO)	Unclassified (31.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.577 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 59.84% β-sheet: 0.00% Coil/Unstructured: 40.16%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03400	DDE_Tnp_IS1	3.85
PF02504	FA_synthesis	2.88
PF03100	CcmE	2.88
PF00486	Trans_reg_C	1.92
PF00480	ROK	1.92
PF06559	DCD	1.92
PF08386	Abhydrolase_4	1.92
PF00857	Isochorismatase	1.92
PF01850	PIN	0.96
PF00311	PEPcase	0.96
PF01926	MMR_HSR1	0.96
PF00675	Peptidase_M16	0.96
PF01261	AP_endonuc_2	0.96
PF01016	Ribosomal_L27	0.96
PF00753	Lactamase_B	0.96
PF13374	TPR_10	0.96
PF13193	AMP-binding_C	0.96
PF14684	Tricorn_C1	0.96
PF07366	SnoaL	0.96
PF02558	ApbA	0.96
PF07519	Tannase	0.96
PF06114	Peptidase_M78	0.96
PF14031	D-ser_dehydrat	0.96
PF04264	YceI	0.96
PF00837	T4_deiodinase	0.96
PF00886	Ribosomal_S16	0.96
PF02233	PNTB	0.96
PF13307	Helicase_C_2	0.96
PF16327	CcmF_C	0.96
PF13620	CarboxypepD_reg	0.96
PF05015	HigB-like_toxin	0.96
PF01738	DLH	0.96
PF00078	RVT_1	0.96
PF05635	23S_rRNA_IVP	0.96
PF12769	PNTB_4TM	0.96
PF02572	CobA_CobO_BtuR	0.96
PF00072	Response_reg	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1662	Transposase and inactivated derivatives, IS1 family	Mobilome: prophages, transposons [X]	3.85
COG1940	Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain	Transcription [K]	3.85
COG0416	Acyl-ACP:phosphate acyltransferase (fatty acid/phospholipid biosynthesis)	Lipid transport and metabolism [I]	2.88
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	2.88
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	1.92
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	1.92
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.92
COG0211	Ribosomal protein L27	Translation, ribosomal structure and biogenesis [J]	0.96
COG0228	Ribosomal protein S16	Translation, ribosomal structure and biogenesis [J]	0.96
COG1282	NAD/NADP transhydrogenase beta subunit	Energy production and conversion [C]	0.96
COG2109	ATP:corrinoid adenosyltransferase	Coenzyme transport and metabolism [H]	0.96
COG2352	Phosphoenolpyruvate carboxylase	Energy production and conversion [C]	0.96
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.96
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	87.50 %
Unclassified	root	N/A	12.50 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	60.58 %
Unclassified	root	N/A	12.50 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	48.08 %
Unclassified	root	N/A	12.50 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.65 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.08 %
Unclassified	root	N/A	12.50 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.69 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.96 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.08 %
Unclassified	root	N/A	12.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.69 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.08 %
Unclassified	root	N/A	12.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.69 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	0.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.08 %
Unclassified	root	N/A	12.50 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.69 %
Candidatus Nitrospira nitrosa	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	0.96 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101514796	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira nitrosa	1755	Open in IMG/M
3300001661\|JGI12053J15887_10303874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300002560\|JGI25383J37093_10094739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	882	Open in IMG/M
3300002562\|JGI25382J37095_10006225	All Organisms → cellular organisms → Bacteria	4274	Open in IMG/M
3300004091\|Ga0062387_101442344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005167\|Ga0066672_10908496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300005167\|Ga0066672_10960459	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300005174\|Ga0066680_10766535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300005175\|Ga0066673_10712732	Not Available	577	Open in IMG/M
3300005177\|Ga0066690_10912448	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300005178\|Ga0066688_10671394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300005180\|Ga0066685_10577146	All Organisms → cellular organisms → Bacteria	774	Open in IMG/M
3300005186\|Ga0066676_10666214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300005187\|Ga0066675_10928365	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300005332\|Ga0066388_108576630	Not Available	509	Open in IMG/M
3300005440\|Ga0070705_100827325	Not Available	739	Open in IMG/M
3300005447\|Ga0066689_10665118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300005468\|Ga0070707_100704453	Not Available	972	Open in IMG/M
3300005538\|Ga0070731_10157772	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300005553\|Ga0066695_10499476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	747	Open in IMG/M
3300005555\|Ga0066692_10332903	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300005556\|Ga0066707_10763363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300005557\|Ga0066704_10538654	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005559\|Ga0066700_10556097	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300005568\|Ga0066703_10845500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300005574\|Ga0066694_10087502	All Organisms → cellular organisms → Bacteria → Acidobacteria	1448	Open in IMG/M
3300005586\|Ga0066691_10431578	Not Available	785	Open in IMG/M
3300005598\|Ga0066706_11088093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300005764\|Ga0066903_107747863	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300006041\|Ga0075023_100320543	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300006046\|Ga0066652_101887332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300006059\|Ga0075017_100014551	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5038	Open in IMG/M
3300006163\|Ga0070715_10723212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	597	Open in IMG/M
3300006173\|Ga0070716_101733677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300006893\|Ga0073928_10007546	All Organisms → cellular organisms → Bacteria	14021	Open in IMG/M
3300009089\|Ga0099828_11615975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300009090\|Ga0099827_10150130	All Organisms → cellular organisms → Bacteria → Acidobacteria	1906	Open in IMG/M
3300009545\|Ga0105237_12244154	Not Available	555	Open in IMG/M
3300010046\|Ga0126384_11596375	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300010303\|Ga0134082_10003938	All Organisms → cellular organisms → Bacteria	5296	Open in IMG/M
3300010325\|Ga0134064_10175596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300010358\|Ga0126370_11639613	Not Available	617	Open in IMG/M
3300010376\|Ga0126381_100207000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2628	Open in IMG/M
3300011270\|Ga0137391_10067015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3079	Open in IMG/M
3300011270\|Ga0137391_10519922	All Organisms → cellular organisms → Bacteria	1006	Open in IMG/M
3300012096\|Ga0137389_11481433	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300012169\|Ga0153990_1095287	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300012200\|Ga0137382_10248599	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1232	Open in IMG/M
3300012201\|Ga0137365_10766030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300012202\|Ga0137363_10004928	All Organisms → cellular organisms → Bacteria	8210	Open in IMG/M
3300012202\|Ga0137363_10225531	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300012203\|Ga0137399_10753051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300012205\|Ga0137362_10800374	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300012361\|Ga0137360_10001392	All Organisms → cellular organisms → Bacteria	14206	Open in IMG/M
3300012922\|Ga0137394_10068397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2955	Open in IMG/M
3300012923\|Ga0137359_11158743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300012930\|Ga0137407_10461394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1183	Open in IMG/M
3300014156\|Ga0181518_10003291	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	15046	Open in IMG/M
3300014169\|Ga0181531_10516191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300015242\|Ga0137412_10577663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300017955\|Ga0187817_11102205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300018062\|Ga0187784_11330710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300018088\|Ga0187771_10152142	All Organisms → cellular organisms → Bacteria	1902	Open in IMG/M
3300018431\|Ga0066655_10135816	All Organisms → cellular organisms → Bacteria → Acidobacteria	1438	Open in IMG/M
3300018482\|Ga0066669_10996944	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300019999\|Ga0193718_1031717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300020579\|Ga0210407_10060046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2847	Open in IMG/M
3300020582\|Ga0210395_10079772	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2410	Open in IMG/M
3300020583\|Ga0210401_10546947	Not Available	1020	Open in IMG/M
3300021170\|Ga0210400_10028310	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4349	Open in IMG/M
3300021170\|Ga0210400_10033493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3983	Open in IMG/M
3300021178\|Ga0210408_10381466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1123	Open in IMG/M
3300021181\|Ga0210388_11163125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	656	Open in IMG/M
3300021401\|Ga0210393_10498961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	994	Open in IMG/M
3300021432\|Ga0210384_10003114	All Organisms → cellular organisms → Bacteria	19538	Open in IMG/M
3300021432\|Ga0210384_10824443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300021560\|Ga0126371_10299489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1734	Open in IMG/M
3300022557\|Ga0212123_10010555	All Organisms → cellular organisms → Bacteria → Acidobacteria	12976	Open in IMG/M
3300024330\|Ga0137417_1115084	Not Available	602	Open in IMG/M
3300025941\|Ga0207711_10809686	Not Available	872	Open in IMG/M
3300026035\|Ga0207703_11538907	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300026296\|Ga0209235_1151298	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300026310\|Ga0209239_1296317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300026313\|Ga0209761_1075544	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300026343\|Ga0209159_1238261	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300026523\|Ga0209808_1173536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300026530\|Ga0209807_1101259	Not Available	1242	Open in IMG/M
3300027061\|Ga0209729_1025194	Not Available	727	Open in IMG/M
3300027565\|Ga0209219_1047205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300027748\|Ga0209689_1157964	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1072	Open in IMG/M
3300027748\|Ga0209689_1281769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300027783\|Ga0209448_10038011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1616	Open in IMG/M
3300027869\|Ga0209579_10069090	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300028047\|Ga0209526_10697752	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300029636\|Ga0222749_10001107	All Organisms → cellular organisms → Bacteria	14284	Open in IMG/M
3300031057\|Ga0170834_104290840	Not Available	585	Open in IMG/M
3300031753\|Ga0307477_10012831	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5734	Open in IMG/M
3300031753\|Ga0307477_10785334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300031754\|Ga0307475_10025916	All Organisms → cellular organisms → Bacteria	4188	Open in IMG/M
3300031823\|Ga0307478_10047694	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3166	Open in IMG/M
3300031962\|Ga0307479_10324402	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300031962\|Ga0307479_11948128	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300032515\|Ga0348332_10643276	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300032805\|Ga0335078_10000633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	54178	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Host-Associated	Host-Associated	3.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Aquatic	Environmental → Aquatic	8.65%
Plants	Host-Associated → Plants	2.88%
Fungi	Host-Associated → Fungi	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.54%
Freshwater	Environmental → Aquatic → Freshwater	4.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.92%
Sediment	Environmental → Aquatic → Sediment	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Mycelium	Host-Associated → Fungi → Mycelium	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.08%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.77%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	24.04%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.58%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.92%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012169	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC074 MetaG	Host-Associated	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300027061	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1015147962	3300000364	Soil	MTANQQYWAALLVSLVAAFLGWLAPTRRMPLDYDAIIWWSVPIAVGWAMILAFCLWRHNKRGLWLVVGAPMALYWPVWLLFNHFPSCYYLRNCI*
JGI12053J15887_103038742	3300001661	Forest Soil	MTENRRYWIALIVSLFVAYLGRLAPSHQMPLDYHAMISRSIPFAIAWAVILAFCLWRYKKRGLWLLVGAPMALYWPIWMLFNHFPPCYYLHNCA*
JGI25383J37093_100947393	3300002560	Grasslands Soil	MTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWPIWLLLNHFPP
JGI25382J37095_100062252	3300002562	Grasslands Soil	MTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWPIWLLLNHFPPCYYLHNCE*
Ga0062387_1014423442	3300004091	Bog Forest Soil	MTTEKTKYWLALIAALAISYLGAKSPIRVPLDYDAMISRSIPLAIAWVAVLAFCLWRYKARGLWLLLGAPMALYWPIWLLFNHFPPCDYLHNCY*
Ga0066672_109084961	3300005167	Soil	DHARDGRWPIRSRLVAGGNCTITMTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWPIWLLFNHFPPCYYLHNCE*
Ga0066672_109604592	3300005167	Soil	TENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCQ*
Ga0066680_107665352	3300005174	Soil	MTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWPIWLLFNHFPPCYYLHNCE*
Ga0066673_107127321	3300005175	Soil	MTENQRYWIGLIASLVIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLLNHFPPCYYLHNCV*
Ga0066690_109124482	3300005177	Soil	MTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCQ*
Ga0066688_106713942	3300005178	Soil	MTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWTLVLTVCLWRYKKRALWLLLEAPMALYWPIWLLFNHFPPCYYLHNCQ*
Ga0066685_105771462	3300005180	Soil	MTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLEAPMALYWPIWLLFNHFPPCYYLHNCQ*
Ga0066676_106662141	3300005186	Soil	MTENQRYWIGLIASLVIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCV*
Ga0066675_109283652	3300005187	Soil	MTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWTLVLTVCLWRYKKRALWLLLGAPMALY*
Ga0066388_1085766301	3300005332	Tropical Forest Soil	MTENRQYWTALLASLVVAFLSWLAPARRMPIDYDAMIWWSVPIAIGWALLLAFGLWRHKKRGLWLLVGAPTALYWPVWLLFNHFPSCYYLHNCK*
Ga0070705_1008273252	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTANQQYWAALLVSLVAAFLGWLAPTRNGMPIDYGAIIWWSVPIAVGWAMVLAFCLWRHKKRGLWLVVGAPLALYWPVWLLFNHFPSCYYLRNCI*
Ga0066689_106651181	3300005447	Soil	MTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCV*
Ga0070707_1007044532	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	RPKMTANQQYWAALLVSLVAAFLGWLAPTRNGMPIDYGAIIWWSVPIAVGWAMVLAFCLWRHKKRGLWLVVGAPLALYWPVWLLFNHFPSCYYLRNCI*
Ga0070731_101577722	3300005538	Surface Soil	MTENHNYWIALVTSLAIAYLSWISPAHRMPLDYNAMITRSIPFGLAWALVLAFSLWRYRSRGLWLLFGAPLALYWPIWLLFHHFPPCYYAGNCA*
Ga0066695_104994762	3300005553	Soil	MTESQRYWIGLIASLVIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCV*
Ga0066692_103329032	3300005555	Soil	MTENQRYWIGLIASLVIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFAPCYYLHNCV*
Ga0066707_107633631	3300005556	Soil	CVTGMTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLEAPMALYWPIWLLFNHFPPCYYLHNCQ*
Ga0066704_105386542	3300005557	Soil	MTENQRYWIGLIASLVIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCQ*
Ga0066700_105560972	3300005559	Soil	MTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWTLVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNC
Ga0066703_108455002	3300005568	Soil	MTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPC
Ga0066694_100875022	3300005574	Soil	CVTGMTENQRYWIGLIASLVIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCV*
Ga0066691_104315781	3300005586	Soil	MTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWPIWLL
Ga0066706_110880932	3300005598	Soil	CVTGMTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCQ*
Ga0066903_1077478632	3300005764	Tropical Forest Soil	MTENRQYWTALLASLVVAFLSWLAPARRMPIDYDAMIWWSVPIAIGWALLLAFGLWRHKKRGLWLLVGAPTALYWPVWLLFNHFPSCYY
Ga0075023_1003205432	3300006041	Watersheds	MTENKRYWLTLTASLVVAYVGRFAPSYRMPLDYDATISTSIPLAIIWAVLLGFCLWRYKKRGLWLLLGTPM
Ga0066652_1018873321	3300006046	Soil	MTENQRYWIGLIASLVIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWTLVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCV*
Ga0075017_1000145513	3300006059	Watersheds	MSQIRRFWVALAVSLVIAFLGWASPLQMPLDYDAMISKSVPLAAAWAAILVFCLWRYRKRGLWLVVGAPMALYWPIWLLFNHFPDCYYLHNCV*
Ga0070715_107232122	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRNTRRSNSTDPDAPWAALLVSLVAAFLGWSAPTRRMPIDYDAIVWWSIPIAVGWAMILAFCLGRHKKRGLWLVVGAPMALHWPVWLLFNHFATIC
Ga0070716_1017336771	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRNTRRSNSTDPDAPWAALLVSLVAAFLGWSAPTRRMPIDYDAIVWWSIPIAVGWAMILAFCLGRHKKRGLWLVVGAPMALHWP
Ga0073928_1000754615	3300006893	Iron-Sulfur Acid Spring	MTESQKYWIALIASLAVACLGGTAPNYRMPLNYHAMISRSIPFAIAWGVLLAFSLWRFKKRGLWLLVGAPMALYWPVWLLFNHFPPCYYLHDCM*
Ga0099828_116159751	3300009089	Vadose Zone Soil	WPIRSRLVAGGNSTITMTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWPIWLLFNHFPPCYYLHNCE*
Ga0099827_101501302	3300009090	Vadose Zone Soil	MTENQRYWIGLIASLAIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCQ*
Ga0105237_122441541	3300009545	Corn Rhizosphere	MTANQQYWAALLVSLVAAFLGWLAPTRSGMPIDYDAIIWWSVPIAVGWAMVLAFCLWRHKKRGLWLVVGAPLALYWPVWLLFNHFPSCYYLRNCI*
Ga0126384_115963752	3300010046	Tropical Forest Soil	MTESQKYWIAFTIALVLAYYGWSAPQYRMPLDYGAMTSKSVPFAIGWAAAVGFALWRFKKRGLFFLVGTPVALYWPVWLLFNDFPPCHYLGNCV*
Ga0134082_100039381	3300010303	Grasslands Soil	MTENQKYWITLIASLIVAYLGSKAPSYRMPLDYDAMISRSILFAIAWAVILAFSLWRYKKRGLWLLVGAPMAFYWPIWLLFNHFPPCCYLHNCE*
Ga0134064_101755961	3300010325	Grasslands Soil	MTENQRYWIGLIELLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCV*
Ga0126370_116396131	3300010358	Tropical Forest Soil	MTENRQYWTALLASLVVAFLSWLAPARRMPIDYDAMIWWSLPIAFGWAVLFAFCLWRHKKRGLWLLVGAPTALYWPVWLLFNHFPSCYYSHNCK*
Ga0126381_1002070002	3300010376	Tropical Forest Soil	MTQNQQYWTELLVSLVAAFLGWQAPTRSMPIDYEATIWWSVPIAIGWAMILAFCLWRHKKRGLWLVVGAPMALYWPVWLLFNHFPPCYYLHNCV*
Ga0137391_100670154	3300011270	Vadose Zone Soil	MTTNQTYWLTLVASLVIAYLGWLAPSYRMPLDYDAMFSRSIPSAVAWTMISIFCLWHFKKRGLWVLLGSPMALYWPIWLLFNRFPPCYYLHNCA*
Ga0137391_105199222	3300011270	Vadose Zone Soil	MKSYLVGESTTGMTANQRYWLLFTASLVIAYVGWISPSHQMPLNYDALKSRSVPLAIAWGLALIFSLWRYKKRGLWLIVGAPLALYWPVWLLFNNFPPCYYSHNCT*
Ga0137389_114814331	3300012096	Vadose Zone Soil	MKSYLVGESTTGMTANQRYWLLFTASLVIAYVGWISPSHQMPLNYDALKSRSVPLAIAWGLALIFSLWRYKKRGLWLIVGAPLALYWPVW
Ga0153990_10952871	3300012169	Attine Ant Fungus Gardens	MTENQRYWIALIASLVVAYLGGSAPNYRMPLDYGAMISRSIPFAIAWAVILAFCLWRYKKRGLWLLVGAPMALYWPIWLLFNHFPPCYYLHNCE*
Ga0137382_102485992	3300012200	Vadose Zone Soil	MTEDREYWIALVLSLIVAYMGWHAPNYRMPLDYGAMTSRSVPFAIAWVMVLIFCLWRYKKRGLWLLLGTPMALYWPIWLLFNHFPSCYYLHNCV*
Ga0137365_107660302	3300012201	Vadose Zone Soil	MTENQRYLIGLIASLVIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCV*
Ga0137363_100049284	3300012202	Vadose Zone Soil	MNENQKYWIALIASLVVAYLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFCLWRYKKRGLWLLVGAPMALYWPIWLLFNHFPRCYYLHNCS*
Ga0137363_102255313	3300012202	Vadose Zone Soil	MTESQRFWIALMASLVVAYLGGSAPNYRMPLDYGAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLAGAPMALYWPIWLLFNHFPPCYYLHNCE*
Ga0137399_107530511	3300012203	Vadose Zone Soil	MTEDREYWIALVLSLIVAYMGWHAPNYKMPLDYGAMTSRSVPFAIAWVMVLIFCLWRYKKRGLWLLLGTPMALYWPIWLLFNHFPSCYYLHNCV*
Ga0137362_108003741	3300012205	Vadose Zone Soil	LRSCLVAGGNYTIGMNENQKYWIALIASLVVAYLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFCLWRYKKRGLWLLVGAQMALYWPIWLLFNHFPRCYYLRNCS*
Ga0137360_1000139214	3300012361	Vadose Zone Soil	MNENQKYWIALIASLVVAYLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFCLWRYKKRGLWLLVGAQMALYWPIWLLFNHFPRCYYLHNCS*
Ga0137394_100683972	3300012922	Vadose Zone Soil	MASLVVAYLGGSAPNYRMPLDYGAMISRSIPFAIAWAVILAFCLWRYKKRGLWLLAGAPMALYWPIWLLFNHFPPCYYLHNCE*
Ga0137359_111587431	3300012923	Vadose Zone Soil	MTENQRYWTALIASLVVAYLGGSAPNWRMPLDYGALISRSIPFGIAWAAILAFCLWRYKKRGLWLLAGAPMALYWPIWLLFNHFPPCYYLHNCQ*
Ga0137407_104613942	3300012930	Vadose Zone Soil	MSENQRYWIALIASLVVAYLGWMAPAHQRPLDYDAMISRSIPFAIAWVVILVFCLWRYKKRGSWLLVGAPMALYWPIWLLFNHFPSCYYLGNCE*
Ga0181518_100032912	3300014156	Bog	MTEKQRYWIAFVASLLIACLGWSAPSYRMPLDYDAMISRSVPYAIGWAVILAFCLWRYKKRGLWVLVGAPMVLYWPIWLLFNHFPPCYYSHNCA*
Ga0181531_105161912	3300014169	Bog	MVSLLIAYLGWSTPSYRMPIDYRAMMSRSVPLAASWVVISAFSLWHFKKRGLWVLLGTPMALYWPIWLLFNHFPPCYYLNNCV*
Ga0137412_105776632	3300015242	Vadose Zone Soil	MLSRSFWIVLAASLVVAYMGWAAPQRQMPLDYDFMIFRSIPFAILWGMILTFSVWRYKKRGLWVLLGTPMALYWPIWLLFNQFPQCYYLHNCV*
Ga0187817_111022051	3300017955	Freshwater Sediment	MTENQKYWIVLIASLVAAYLGSKAPSYRIPLDYDAMISRSIPFAVAWAAILAFSLWRYKKRGLWLLVGAPMALYWPIWILFNHFPLCYYLHNCE
Ga0187784_113307102	3300018062	Tropical Peatland	RSMTGNQRYWIAFIASLLIAYFGWSAPSYRMPLGYDAMISRSVPFAIGWTVILAFCLWRYKKRGLWVLVGAPMALYWPIWLLFNHFPPCYYSHNCA
Ga0187771_101521423	3300018088	Tropical Peatland	MSENQRYWIALIASLVIAYLGSKSPSYRMPVDYEAIIARSIPLAIAWAALVTFSLWRYRRRGLWLLLGAPIAPY
Ga0066655_101358163	3300018431	Grasslands Soil	MTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWTLVLTVCLWRYKKRALWLLLEAPMALYWPIWLLFNHFPPCYYLHNCQ
Ga0066669_109969442	3300018482	Grasslands Soil	MTENQRYWIGLIASLVIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCV
Ga0193718_10317171	3300019999	Soil	MVDKREFWIVLIVSYVIAFLGSASPTHRMPLDYDAMIWRSIPCAFVWALVLASSLLRFKKQGLWLLLGSPMALYWPIWLVFNHFPACYYLGGCE
Ga0210407_100600461	3300020579	Soil	MTENQRYGIALAASLVFAYLGSTAPNYRMPIDYDAIISRSIPFAIVWALIFTLCLWRYKKQGLWLLVGAPSALYWPIWLLINHFPACYYLHNCA
Ga0210395_100797722	3300020582	Soil	MLPLERLLMTETKKYWLALVASLALAYLGGTAPSYRMPLDYDAMISRSIPLAVAWAVIVGFCLWRFKKRGLWLLLGVPMALYWPIWLLFNHFPACYYLHNCQ
Ga0210401_105469471	3300020583	Soil	MLPLERLLMTETKKYWLALVASLALAYLGGTAPSYRMPLDYDAMISRSIPLAVAWAVIVGFCLWRFKKRGLWLLLGVPMALY
Ga0210400_100283103	3300021170	Soil	MTENNKYWLALVASLLIAYFGGTAPSYRMPLNYDAMISRSVPLAIVWALIVGFCLWRFKKRGLWLLLGAPMALYWPIWLLFNHLPACYYLHNCQ
Ga0210400_100334932	3300021170	Soil	MLPLERLLMTETRKYWLALVGSLALAYLGGTAPSYRMPLDYDAMISRSIPLAVAWAVIVGFCLWRFKKRGLWLLLGVPMALYWPIWLLFNHLPACYYLHNCQ
Ga0210408_103814662	3300021178	Soil	MTENQRFWIALMASLVVAYLGGSAPNYRMPLDYGAMISRSIQFAIAWAVILAFGLWSYKKRGLWLLVGAPMALYWPIWLLFNHFPPCYYLRNCV
Ga0210388_111631251	3300021181	Soil	MTENQKYWIALIASLVVAYQGMATIGHQRPLDYNGMISKGIPLAIIWAAILSFCVWRYKKRGLWLLMGAPLALYWPIWRLLHHLPSCYYSRNCQ
Ga0210393_104989611	3300021401	Soil	MLPLERLLMTETKKYWLALVGSLALAYLGGTAPSHRMPLDYDAMISRSVPLVVAWAVIVGFCLWRFKKRGLWLLLGVPMALYWPIWLLFNHFPACYYLHNCK
Ga0210384_1000311413	3300021432	Soil	MTENQRFWIALMASLVVAYLGGSAPNYRMPLDYGAMISRSIPFAIAWAVILAFGLWSYKKRGLWLLVGAPMALYWPIWLLFNHFPPCYYLRNCV
Ga0210384_108244432	3300021432	Soil	MTDNQKYWIWFAASLAVALLGNVAPARQMPLDYDAMLWRSIPLAIFWGLILGFCLWHYKKRGLWLLVGAPLALYWPMWLMFHGFPSCYYSGNCI
Ga0126371_102994891	3300021560	Tropical Forest Soil	MTENQQYWTALLVSLVAAFLGWQAPTRRMPIDYEATIWWSVPIAIGWAMILAFCLWRHKKRGLWLIVGAPMALYWPVWLLFNHFPPCYYLHNCE
Ga0212123_1001055515	3300022557	Iron-Sulfur Acid Spring	MTESQKYWIALIASLAVACLGGTAPNYRMPLNYHAMISRSIPFAIAWGVLLAFSLWRFKKRGLWLLVGAPMALYWPVWLLFNHFPPCYYLHDCM
Ga0137417_11150841	3300024330	Vadose Zone Soil	MTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWPIWLLLNHFPPCYYLHNCE
Ga0207711_108096862	3300025941	Switchgrass Rhizosphere	MTANQQYWAALLVSLVAAFLGWLAPTRNGMPIDYGAIIWWSVPIAVGWAMVLAFCLWRHKKRGLWLVVGAPLALYWPVWLLFNHFPSCYYLRNCI
Ga0207703_115389072	3300026035	Switchgrass Rhizosphere	SLVAAFLGWLAPTRNGMPIDYGAIIWWSVPIAVGWAMVLAFCLWRHKKRGLWLVVGAPLALYWPVWLLFNHFPSCYYLRNCI
Ga0209235_11512981	3300026296	Grasslands Soil	MTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWP
Ga0209239_12963172	3300026310	Grasslands Soil	MTEDREYWIALVLSLIVAYMGWHAPNYRMPLDYGAMTSRSVPFAIAWVMVLIFCLWRYKKRGLWLLLGTPMALYWPIWLLFNHFPS
Ga0209761_10755442	3300026313	Grasslands Soil	MTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWPIWLLLNDFPPCYYLHNCE
Ga0209159_12382611	3300026343	Soil	MTESQRYWIGLIASLVIGYLGWQSHSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCV
Ga0209808_11735362	3300026523	Soil	MTESQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCQ
Ga0209807_11012592	3300026530	Soil	MTENQKYWITLIASLIVAYLGSKAPSYRMPLDYDAMISRSILFAIAWAVILAFSLWRYKKRGLWLLVGAPMAFYWPIWLL
Ga0209729_10251942	3300027061	Forest Soil	MTENQKYWIALIASLVLAYLGSKAPSYRMPLDYDAMISRSIPFAIAWAAIFTFSLWRYKKRGLWLLVGAPMALYWPIWLLFNHF
Ga0209219_10472052	3300027565	Forest Soil	MTENQRYWVALIASLVVAYLGGSAPNYRRPLDYGAMISRSIPFAIAWAVILAFCLWRYKKRGLWLLAGSPMALYWPIWLLFNHFPPCYYLHNC
Ga0209689_11579642	3300027748	Soil	MTENQRYWIGLIASLVIAYLGWRSPSYRMPLVYDAMISRSVPLAMAWALVLTVCLWRYKKRALWLLLGAPMALYWPIWLLFNHFPPCYYLHNCV
Ga0209689_12817691	3300027748	Soil	MTENQKYWIALIASLVVACLGSKAPSYRMPLDYDAMISRSIPFAIAWAVILAFSLWRYKKRGLWLLVGAPMALYWPIWLLFNHFPPCYYLHNCE
Ga0209448_100380111	3300027783	Bog Forest Soil	MTTEKTKYWLALIAALAISYLGAKSPIRVPLDYDAMISRSIPLAIAWVAVLAFCLWRYKARGLWLLLGAPMALYWPIWLLFNHFPPCYYLHNCY
Ga0209579_100690903	3300027869	Surface Soil	MTENHNYWIALVTSLAIAYLSWISPAHRMPLDYNAMITRSIPFGLAWALVLAFSLWRYRSRGLWLLFGAPLALYWPIWLLFHHFPPCYYAGNCA
Ga0209526_106977522	3300028047	Forest Soil	SLVIAYLGSSAPSYRMPLDYDAMISRSIPLAIAWAVILAFCLWHYKKRGLWLLVGAPMALYWPIWLMFNHFPPCYYSGNCT
Ga0222749_100011072	3300029636	Soil	MTENQRFWIALMASLVVAYLGGSAPNYRMPLDYGAMISRSIPFAIAWAVILAFGPWSYKKRGLWLLVGAPMALYWPIWLLFNHFPPCYYLRNCV
Ga0170834_1042908401	3300031057	Forest Soil	MASLVAAFLGSMAPSYRRPLDYGAMISRSIPLAIAWVVFVAFSLWRYKKRGLWLLVGAPMAL
Ga0307477_100128315	3300031753	Hardwood Forest Soil	MTTNQRYWIALIASLVIAYLGWSAPSYRMPLDYDAMISRSIPFAVAWVTISAFSLWHFKKRGLWLLLGTPMALYWPIWLLVNHFPPCYYLHNCE
Ga0307477_107853342	3300031753	Hardwood Forest Soil	IALIASLVLAYLGSKAPSYRMPLDYDAMISRSIPFAIAWAAIFTFSLWRYKKRGLWLLVGAPMALYWPIWLLFNHFPACYYLHNCD
Ga0307475_100259162	3300031754	Hardwood Forest Soil	MTENQKYWIALIASLVLAYLGSKAPSYRMPLDYDAMISRSIPFAIAWAAIFTFSLWRYKKRGLWLLVGAPMALYWPIWLLFNHFPPCYYLHNCD
Ga0307478_100476941	3300031823	Hardwood Forest Soil	MPENQRYWFALLASVTVACLGYMAPRGQMPLNYDAMIWRSIPLAIIWALILAASLWRHKKRGFWLLLGAPVALYWPIWLVFNHFPA
Ga0307479_103244022	3300031962	Hardwood Forest Soil	MTTNQRYWLTLVASLVIACLGWSAPSRMPLDYDAMISRSLPLALAWAMISAFCVWHFKKRGFWSLVGAPMALYWPIWLLFNHFPPCYYLHNCL
Ga0307479_119481282	3300031962	Hardwood Forest Soil	MTENQEYWIALTASLVVAYLGSSAPSYRMPLDYDAMISRSIPFAVAWAVILAFCLWRYKKRGLWVLVGAPMALRWPIW
Ga0348332_106432761	3300032515	Plant Litter	RDSDVFRVVECRHTMIEKLIYWIALIASLVVAFLGMRAPSYQMPLYYDAMITRSIPLAVAWAIILAFCPWRYKKRGLWLLIGAPLALYWPMWLLFNHFPSCYYLHDCI
Ga0335078_1000063322	3300032805	Soil	MSLVFAFLGWKAPEWRMPLDYDAMISRSIPFAVAWTALLTICLWRCKLRGLWLLVGASMALYWPIWLIFNHFPSCYYSGNCS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F098100

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences