Metagenome Family F098091

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F098091
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	64 residues
Representative Sequence	MEEPIDIEIEKESEEVRVYAWRVEQLGKLGLSTLIADAVANLVDWHEVARLVQKGCPPELALEIAR
Number of Associated Samples	62
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.87 %
% of genes near scaffold ends (potentially truncated)	24.04 %
% of genes from short scaffolds (< 2000 bps)	83.65 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (77.885 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (23.077 % of family members)
Environment Ontology (ENVO)	Unclassified (36.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.885 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.06% β-sheet: 0.00% Coil/Unstructured: 48.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00072	Response_reg	30.77
PF04545	Sigma70_r4	16.35
PF00196	GerE	12.50
PF00174	Oxidored_molyb	4.81
PF13185	GAF_2	1.92
PF00210	Ferritin	1.92
PF07439	DUF1515	0.96
PF00106	adh_short	0.96
PF00970	FAD_binding_6	0.96
PF06736	TMEM175	0.96
PF13462	Thioredoxin_4	0.96
PF00175	NAD_binding_1	0.96
PF12680	SnoaL_2	0.96
PF13492	GAF_3	0.96
PF13744	HTH_37	0.96
PF03734	YkuD	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	4.81
COG3915	Uncharacterized conserved protein	Function unknown [S]	4.81
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.96
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.96
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.88 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	42.31 %
Unclassified	root	N/A	22.12 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.50 %
Unclassified	root	N/A	22.12 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.85 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.96 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	0.96 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.96 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Capillimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae	0.96 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	0.96 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Capillimicrobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium	0.96 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	0.96 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.96 %
unclassified Gaiella	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella	0.96 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	22.12 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	3.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.92 %
Gaiella sp. SCGC AG-212-M14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	0.96 %
Capillimicrobium parvum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	0.96 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100780117	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300000550\|F24TB_10757211	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300000550\|F24TB_13121102	Not Available	766	Open in IMG/M
3300000956\|JGI10216J12902_101331877	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300000956\|JGI10216J12902_102739035	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300000956\|JGI10216J12902_102880660	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300000956\|JGI10216J12902_106654424	Not Available	1473	Open in IMG/M
3300001431\|F14TB_105094303	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1133	Open in IMG/M
3300002568\|C688J35102_117903534	Not Available	514	Open in IMG/M
3300003267\|soilL1_10003940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1599	Open in IMG/M
3300003659\|JGI25404J52841_10055987	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300004081\|Ga0063454_100860160	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300004114\|Ga0062593_100108291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1984	Open in IMG/M
3300004114\|Ga0062593_102451452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300004479\|Ga0062595_101834514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300004480\|Ga0062592_100560476	Not Available	960	Open in IMG/M
3300005294\|Ga0065705_10007801	All Organisms → cellular organisms → Bacteria	3460	Open in IMG/M
3300005332\|Ga0066388_100019288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5885	Open in IMG/M
3300005332\|Ga0066388_100096174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3408	Open in IMG/M
3300005332\|Ga0066388_100153274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2886	Open in IMG/M
3300005332\|Ga0066388_103814703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	769	Open in IMG/M
3300005332\|Ga0066388_104085549	Not Available	744	Open in IMG/M
3300005332\|Ga0066388_105130499	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300005332\|Ga0066388_105394485	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300005435\|Ga0070714_100458864	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300005437\|Ga0070710_10126009	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300005440\|Ga0070705_101635318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300005445\|Ga0070708_100040961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4059	Open in IMG/M
3300005445\|Ga0070708_100984740	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300005456\|Ga0070678_101757222	Not Available	584	Open in IMG/M
3300005467\|Ga0070706_101382376	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300005467\|Ga0070706_101588244	Not Available	597	Open in IMG/M
3300005468\|Ga0070707_100168156	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2137	Open in IMG/M
3300005468\|Ga0070707_100583970	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300005468\|Ga0070707_101145975	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005471\|Ga0070698_100155970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2228	Open in IMG/M
3300005471\|Ga0070698_101511413	Not Available	623	Open in IMG/M
3300005529\|Ga0070741_10017660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11688	Open in IMG/M
3300005536\|Ga0070697_101277741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	655	Open in IMG/M
3300005542\|Ga0070732_10034855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2877	Open in IMG/M
3300005546\|Ga0070696_100466768	Not Available	999	Open in IMG/M
3300005549\|Ga0070704_101048705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → unclassified Gaiella → Gaiella sp. SCGC AG-212-M14	739	Open in IMG/M
3300005713\|Ga0066905_100048481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2580	Open in IMG/M
3300005713\|Ga0066905_100071526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2235	Open in IMG/M
3300005713\|Ga0066905_100153337	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300005713\|Ga0066905_100328516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1213	Open in IMG/M
3300005713\|Ga0066905_100471791	Not Available	1037	Open in IMG/M
3300005713\|Ga0066905_101541847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	606	Open in IMG/M
3300005764\|Ga0066903_100282361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2604	Open in IMG/M
3300005764\|Ga0066903_100458309	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300005764\|Ga0066903_101394439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1316	Open in IMG/M
3300005764\|Ga0066903_101642075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1221	Open in IMG/M
3300005764\|Ga0066903_101922427	All Organisms → cellular organisms → Bacteria	1134	Open in IMG/M
3300005764\|Ga0066903_103071018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	904	Open in IMG/M
3300005764\|Ga0066903_107065063	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005764\|Ga0066903_108704106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300005886\|Ga0075286_1066166	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300006046\|Ga0066652_100115145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2196	Open in IMG/M
3300006163\|Ga0070715_10949463	Not Available	532	Open in IMG/M
3300006852\|Ga0075433_10165249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1970	Open in IMG/M
3300006852\|Ga0075433_11224938	Not Available	651	Open in IMG/M
3300009089\|Ga0099828_10898027	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300009090\|Ga0099827_10770091	Not Available	832	Open in IMG/M
3300010043\|Ga0126380_10687648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	820	Open in IMG/M
3300010362\|Ga0126377_10297846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1589	Open in IMG/M
3300010362\|Ga0126377_11389078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	775	Open in IMG/M
3300010362\|Ga0126377_13016218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300010366\|Ga0126379_12667464	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010398\|Ga0126383_11868453	Not Available	689	Open in IMG/M
3300010398\|Ga0126383_12781673	Not Available	571	Open in IMG/M
3300012198\|Ga0137364_10718984	Not Available	754	Open in IMG/M
3300012201\|Ga0137365_11228084	Not Available	535	Open in IMG/M
3300012285\|Ga0137370_10218190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Capillimicrobiaceae → Capillimicrobium → Capillimicrobium parvum	1123	Open in IMG/M
3300012350\|Ga0137372_11214656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	508	Open in IMG/M
3300012360\|Ga0137375_11024761	Not Available	648	Open in IMG/M
3300012948\|Ga0126375_10938017	All Organisms → cellular organisms → Bacteria → Terrabacteria group	699	Open in IMG/M
3300012948\|Ga0126375_11141111	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300012948\|Ga0126375_11731555	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300015371\|Ga0132258_12223515	All Organisms → cellular organisms → Bacteria	1377	Open in IMG/M
3300016294\|Ga0182041_11693705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	585	Open in IMG/M
3300016422\|Ga0182039_11736457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	571	Open in IMG/M
3300018482\|Ga0066669_11440134	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300021479\|Ga0210410_10155475	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300025906\|Ga0207699_10466142	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300025910\|Ga0207684_10188251	All Organisms → cellular organisms → Bacteria	1780	Open in IMG/M
3300025910\|Ga0207684_11414953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300025910\|Ga0207684_11515417	Not Available	545	Open in IMG/M
3300025922\|Ga0207646_10010946	All Organisms → cellular organisms → Bacteria	8808	Open in IMG/M
3300025922\|Ga0207646_10213347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1743	Open in IMG/M
3300025922\|Ga0207646_10354306	Not Available	1326	Open in IMG/M
3300025922\|Ga0207646_10369081	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300025929\|Ga0207664_11778618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	539	Open in IMG/M
3300026121\|Ga0207683_10540501	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300027842\|Ga0209580_10076736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1592	Open in IMG/M
3300031544\|Ga0318534_10657290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	594	Open in IMG/M
3300031720\|Ga0307469_11892403	Not Available	578	Open in IMG/M
3300031753\|Ga0307477_10343953	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300031831\|Ga0318564_10201065	Not Available	887	Open in IMG/M
3300031890\|Ga0306925_10772099	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300031962\|Ga0307479_10272580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1672	Open in IMG/M
3300031962\|Ga0307479_10475947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1233	Open in IMG/M
3300032180\|Ga0307471_100607670	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300032180\|Ga0307471_102023732	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.23%
Host-Associated	Host-Associated	5.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.23%
Plants	Host-Associated → Plants	5.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	50.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.27%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	25.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.54%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	23.08%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	20.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003659	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005886	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1007801172	3300000364	Soil	MEKSIDSESEEVRVYAWRVEQLGKLGVSVLVAGAVANVVDWHEVANLVHKGCPPELALEIAR*
F24TB_107572112	3300000550	Soil	VRQSEAARIHAWRAEQLRRLGLSTVIADAVADLVDWHEVAPLVDMGCPPALALEIAR*
F24TB_131211022	3300000550	Soil	VAELRTRKESTENELSDTKSEESPEDVLVYAWRVEQLARLGLSSIIASAVASLVDWHDVARLVQHGCSPELALEIVR*
JGI10216J12902_1013318772	3300000956	Soil	MEEWIDFEIEKESEEVRVYAWRVEQLASLGISAVIADAVANVVDWHEVAYLVQKGCPPELAVDIAR*
JGI10216J12902_1027390351	3300000956	Soil	MEDSIQFGIEEESEQARVFAWRAEQLGKLGISTVIADAVANLVDWHDVAGLVEKGCLPDLALEI
JGI10216J12902_1028806604	3300000956	Soil	MEEPIGIDTKRASEEVRVYAWRVEQLGKLGLSTVIADAVADFVDWHEVARLVHKGCPPELALEIAR*
JGI10216J12902_1066544242	3300000956	Soil	MQESIDFQIERESEEVRVYAWRVEQLGKLGISTWVADAVANMVNWHDVARLVQKGCPPDLALEISR*
F14TB_1050943032	3300001431	Soil	VNELSDTKSEESPEDVLVYAWRVEQLARLGLSSIIASAVASLVDWHDVARLVQHGCSPELALEIVR*
C688J35102_1179035341	3300002568	Soil	VNESSDTKSEESPDDVLVYAWRVEQLARLGLSTIIAGAVASLVDWHDVARLVQHGCSPELAVEIVR*
soilL1_100039402	3300003267	Sugarcane Root And Bulk Soil	VEELTDIAIEKPDEDELVYAWRVEQLAKLGLPDLIASAVATIVDWHEVAGLVERGCSPELALEIVR*
JGI25404J52841_100559871	3300003659	Tabebuia Heterophylla Rhizosphere	MNESIEMESEEEVRVHAWRAEQLGNLGLSKPVAEAAAELVDWHEVAPLVDKGCPPELALEIAR*
Ga0063454_1008601601	3300004081	Soil	SFVPGLRTRKESTVNESSDTKSEESPDDVLVYAWRVEQLARLGLSTIIAGAVASLVDWHDVARLVQHGCSPELAVEIVR*
Ga0062593_1001082912	3300004114	Soil	MQESIDFQIERESEEVRVYAWRVEQLGKLGISTWVADAVANMVDWHDVARLVQKGCPPDLALEISR*
Ga0062593_1024514521	3300004114	Soil	MNEPIEMESEEVRVHAWHVEQLGNLGLSTFVAEAAADFVDWHEIAPLVDKGCPPELALEIAR*
Ga0062595_1018345141	3300004479	Soil	MEEPIDIEIEKESEEVRVYAWRVEQLGRLGLSTLIADAVANLVDWHEVARLVQKGCPPELALEIAR*
Ga0062592_1005604761	3300004480	Soil	MQESIDFQIERESEKVRVYAWRVEQLGKLGISTWVADAVANMVDWHDVARLVQKGCPPDLALEISR*
Ga0065705_100078016	3300005294	Switchgrass Rhizosphere	MNEPIEMQSEEVRVHAWRVEQLGNLGLSTFIAEAAADFVDWHEIAPLVDKGCPPELALEIAR*
Ga0066388_1000192883	3300005332	Tropical Forest Soil	MEEPIEIERESEEVRVYAWRIEQLGKLGLSSVIADAMASVVDWHDVARLVDKGCTPELAVEIAR*
Ga0066388_1000961742	3300005332	Tropical Forest Soil	VDESIDSEIDRESEDVRVYAWRVEQLGKLGISIVIAGAVANVVDWHEVARLVHKGCPPELALEIAR*
Ga0066388_1001532743	3300005332	Tropical Forest Soil	MEEEPLDIEIEKESEELQVYRWRIEQLEKLGVSSLIADAVANLVDWHEVARLVHEGCPPELALAIAR*
Ga0066388_1038147031	3300005332	Tropical Forest Soil	MDGWINSDDDESEEIRVYAWRVEQLGNLGIAPLMADAVASFVDWHDVAYLVGKGCPPGLALDIAR*
Ga0066388_1040855492	3300005332	Tropical Forest Soil	MEDWIEFETERETEQLRVYAWRAEQLGKLGVSSLIADAVANAVDWHEVAWLVEKGCPPELALDIAR*
Ga0066388_1051304992	3300005332	Tropical Forest Soil	MDDWTDPDEDESEQFRVYVWRVEQLGNLGVSPLIADAFASFVDWHEVAYLVGKGCPPGLALDIAR*
Ga0066388_1053944852	3300005332	Tropical Forest Soil	MEEPIDIEIEKESEEVRVNAWRVEQLGKLGLSSAIADAVANVVDWHDVARLVERGCPPELALEIAR*
Ga0070714_1004588642	3300005435	Agricultural Soil	MEEAIETGIDEESEEVRIHAWRAEQLGKLGFSTIIAEAVADVVDWHEVAPLVAKGCPLALALEIAR*
Ga0070710_101260091	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	TMEEAIETGIDEESEEVRIHAWRAEQLGKLGFSTIIAEAVADVVDWHEVAPLVAKGCPLALALEIAR*
Ga0070705_1016353181	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEEPIDIEIEKESEEVRVYAWRVEQLGRLGLSTLIADAVANLVDWHEVARLVQKGCPPSLALEIAR*
Ga0070708_1000409616	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEEAMEIEIEKESEEIRVYAWRVEQLAKLGLSAVIADVVANFVDWHEVARLVEKGCPPDLALEIAR*
Ga0070708_1009847402	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEEPLDIEIEKESEEVRIYAWRVEQLAKLGLSTVIANAVATFVDWHEVSRLVEKGCPPELALEIAR*
Ga0070678_1017572221	3300005456	Miscanthus Rhizosphere	MEEAIETGIDEESEEVRIHAWRAEQLGKLGFSTVIAEAVADVVDWHEVAPLVAKGCPLALALEIAR*
Ga0070706_1013823761	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	EIEKESEEVRVYAWRVEQLGKLGLSTVIADAVASLVDWHEVARLVEKGCPPELALEIAR*
Ga0070706_1015882442	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MEELIDIEIETESEEVRVYAWRVEQLGKLGLSTVIADAVANLVDWHEVARLVEKGCPPE
Ga0070706_1016988001	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RIYAWRVEQLAKLGLSTVIANAVATIVDWHDVARLVEKGCPPELALEIAR*
Ga0070707_1001681562	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEEAIDIEIEKESEEVRIYAWRVEQLAKLGLSTVIANAVATIVDWHDVARLVEKGCPPELALEIAR*
Ga0070707_1005839702	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEEQIDIEIEKESEEVRVYAWRVEQLGKLGLSTMIADAVANLVDWHDVARLVHKGCPPELALEIAR*
Ga0070707_1011459751	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEDLIDIEIEKESEEVRVYAWRVEQLAKLGLSNVIADAVANLVDWHEVARLVQKGCPPELALEIAR*
Ga0070698_1001559703	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDELLDIEIEKESEEVRVYAWRVEQLTKLGLSTVIAAAVATFVDWHEVARLVQRGCSPELALEIAR*
Ga0070698_1015114132	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MEELIDIEIEAENEEVRIYAWRVEQLAKLGLSTVIAKAVATFVDWHDVARLVEKGCPPELALEIAR*
Ga0070741_100176603	3300005529	Surface Soil	MEETLEIEIEKESEEVRVYAWRVEQLAKLGLSTIIAYTVANLVDWHEVARLVQKGCPPELALEIAR*
Ga0070697_1012777412	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	IDIEIEKESEEVRVYAWRVEQLGKLGLSTLIADAVANLVDWHEVARLVQKGCPPELALEIAR*
Ga0070732_100348555	3300005542	Surface Soil	MEETLDIEIEKESEEVRVYAWRVEQLARLGLSTIMAYAVANFVDWHDVARLVQKGCPPELALEIAR*
Ga0070696_1004667682	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MDEEIYFEIERESEEARVHAWRVEQLGKLGLSNVIAEAAADLVDWHEIARLGEKGCPPQLALEIAR*
Ga0070704_1010487051	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MHGPIEMQSEEVRVHAWRVERLGNLGLSTLVAETAADFVDWHEVAPLVDKGCPLELALETAR*
Ga0066905_1000484814	3300005713	Tropical Forest Soil	MQRSIDSEIEDVRVYAWRVEQLGRLGISIVIASAVANVVDWHEVARLVQNGCPAELALEIAR*
Ga0066905_1000715261	3300005713	Tropical Forest Soil	MEQSIDSGIERESEEVLVYAWRVEQLARLGISIVMAGALANVVDWHDVARLVHKGCPAELALEIAR*
Ga0066905_1001533372	3300005713	Tropical Forest Soil	MEIEKESEEVRVHAWRAEQLRKLGLSTIIADAVADLVDWHEVEPLVEKGCPPALALEIAR
Ga0066905_1003285163	3300005713	Tropical Forest Soil	EKENEEVRVYAWRVEQLGKLGISPVIADAVANLVDWHEVAYLVHKGCPPELALDIAR*
Ga0066905_1004717911	3300005713	Tropical Forest Soil	MDDWTDSDEDESEQTRVYVWRVEQLGNLGVSPLIADAFASFVDWHDVAYLVGKGCPPGLALDIAR
Ga0066905_1015418472	3300005713	Tropical Forest Soil	MEKSIDSESEELRVYAWRVEQLGKLGISIVIAGAVANIVDWHEVARLIRKGCPPELALEIAR*
Ga0066903_1002823614	3300005764	Tropical Forest Soil	MEEPIDIENESEEDRVYAWRIEQLGRLGLRLGIADAVANIVDWHEVARLVDKGCPPELAVEIAR*
Ga0066903_1004583093	3300005764	Tropical Forest Soil	MEEPIEIEREGEEVRVYAWRIEQLGKLGLSSVIADAMASVVDWHDVARLVDKGCPPELAVEIAR*
Ga0066903_1013944392	3300005764	Tropical Forest Soil	MEEWIDFEIEEGSEEAGVHAWRVEQLGNLGISTVIADAVANAVDWHEVARLVRKGCPPELALDIAR*
Ga0066903_1016420752	3300005764	Tropical Forest Soil	MEEPSEIEEESEQVRVYAWRIEQLGKLGLSTVIADAVANVVDWHEVARLVDKGCPPELAVEIAR*
Ga0066903_1019224272	3300005764	Tropical Forest Soil	MDGWIHPDEGESEQFRVYAWRVEQLGNLGISPLIADAFATLVDWHDVAYLVRKGCPPGLALDIAR*
Ga0066903_1030710183	3300005764	Tropical Forest Soil	MQEPIEIEHESEEVRVYAWRIEQLGKLGLSSLIADAVANVVDWHEVARLVDRGCPPELAVEIAR*
Ga0066903_1070650631	3300005764	Tropical Forest Soil	KEREEVRVHAWRVEQLGNLGLSTVIADVFANVVDWHEVARLVHKGCPPELALDIAR*
Ga0066903_1087041061	3300005764	Tropical Forest Soil	MDDWTDPDEDESEQIRVYVWRVEQLGNLGVSPLIADAFASFVDWHDVAYLVGKGCPPGLALDIAR*
Ga0075286_10661661	3300005886	Rice Paddy Soil	AEEALVNTWRVEQLAKLGLSNVIANAVATLVDWHEVARLVEHGCSPELALEIVR*
Ga0066652_1001151452	3300006046	Soil	VNELSDTKSEESPEDVLVYAWRVEQLARLGLSSIIASAVASLVDWHEVARLVQHGCSPELALEIVR*
Ga0070715_109494632	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MEEAIETGIDEESEEVRIHAWRAEQLGKLGFSTVIAEAVADVVDWHEVAPLVARGCPLALALEIAR*
Ga0075433_101652492	3300006852	Populus Rhizosphere	MEDSIQFGIEEESEQARVFAWRAEQLGKLGISTVIADAVANLVDWHDVAGLVEKGCPPDLALEIAR*
Ga0075433_112249381	3300006852	Populus Rhizosphere	MEELIDIEIEAENEEVRIYAWRVEQLAKLGLSTVIAKAVATFVDWHDVARL
Ga0099828_108980272	3300009089	Vadose Zone Soil	MEEAMEIEIEKESEEIRVYAWRVEQLAKLGLSTVIADVVANFVDWHEVARLVQKGCPPELALEIAR*
Ga0099827_107700911	3300009090	Vadose Zone Soil	MEEATEIEIEKESEEIRVYAWRVEQLAKLGLSTVIADVVANCVDWHEVARLVQKGCPPELALEIAR*
Ga0126380_106876481	3300010043	Tropical Forest Soil	MEQSIDSGIERESEEVLVYAWRVEQLARLGISIVMAGAVANVVDWHDVARLVHKGCPAELALEIAR*
Ga0126377_102978462	3300010362	Tropical Forest Soil	MLRRLAKEIRQGVAPMEESIDFEIERESDEVLVYAWRVEQLAKLGISTVIAGAVANAVDWHEVARLVHRGCPPDLALEIAR*
Ga0126377_113890781	3300010362	Tropical Forest Soil	MQEPSEIDEIEESEEVRVFAWRIEQLRTLGVSSVIAEAVANVVDWHEVARLVDKGCPPELALE
Ga0126377_130162181	3300010362	Tropical Forest Soil	MEGSTDSEIQCESEDVRVYAWRVEQLAKLGISTVIAGSLANVVDWHEVASLVQKGCPPELALEIAR*
Ga0126379_126674641	3300010366	Tropical Forest Soil	KESDWIDPDEDESEQFRVYVWRVEQLGNLGVSPLIADAFASFVDWHDVAYLVGKGCPPGLALDIAR*
Ga0126383_118684531	3300010398	Tropical Forest Soil	MEEPIGMEIEKESEEVRVHAWRAEQLRKLGLSTMIADAVADLVDWHEVAPLVEKGCPPALALEIAR*
Ga0126383_127816732	3300010398	Tropical Forest Soil	MERSIDSEIEEVRVYAWRVEQLGRLGISIVIASAVANLVDWHEVAHLVQNGCPPELALEIAR*
Ga0137364_107189841	3300012198	Vadose Zone Soil	VNELSETKSEESPEDVLVYAWRVEQLARLGLSSIIASAVASLVDWHDVARLVQHGCSPELALEIVR*
Ga0137365_112280842	3300012201	Vadose Zone Soil	VTELSDTKSEESPEDVLVYAWRVEQLARLGLSSIIASAVASLVDWHDVARLVQHGCSPELALEIVR*
Ga0137370_102181902	3300012285	Vadose Zone Soil	VNELSDTKSEESPEDVLVYAWRVEQLARLGLSSIIASAVASLVDWHDVARLVQRGCSPELALEIVR*
Ga0137372_112146561	3300012350	Vadose Zone Soil	DTKSEESPEDVLVYAWRVEQLARLGLSSIIASAVASLVDWHDVARLVQHGCSPELALEIVR*
Ga0137375_110247611	3300012360	Vadose Zone Soil	VTELSDTKSEESPEDVLVYAWRVEQLARLGLSSIIASAVASLVDWHDVARLVQHGCSPELAL
Ga0126375_109380172	3300012948	Tropical Forest Soil	MERSIDSESEEIRVYAWRVEQLGRLGISIVIASAVANLVDWHEVAHLVHSGCPPELALEIAR*
Ga0126375_111411112	3300012948	Tropical Forest Soil	IEIERESEEVRVYAWRIEQLGKLGLSSVIADAMASVVDWHDVASLVDKGCPPELAVEIAR
Ga0126375_117315551	3300012948	Tropical Forest Soil	DEVLVYAWRVEQLAKLGISTVIAGAVANVVDWHEVARLVRRGCPPDLALEIAR*
Ga0132258_122235152	3300015371	Arabidopsis Rhizosphere	MEDLIDTEIETEPEEVRVFAWRVEQLAQLGVSTLIATAFASAVDWHEVARLVQEGCPPELALDIVR*
Ga0182041_116937052	3300016294	Soil	MEEPFENEKESEELEVYAWRIEQLAKLGLPSLIADRVANDVDWHDVARLVDRGCPL
Ga0182039_117364571	3300016422	Soil	MEEPFENEKESEELQVYAWRIEQLAKLGLPSLIADRVANDVDWHDVARLVDRGCPLDLAV
Ga0066669_114401341	3300018482	Grasslands Soil	VNELSDTKSEESPEDVLVYAWRVEQLARLGLSSIIASAVASLVDWHDVARLVQRGCSPELALEIVR
Ga0210410_101554753	3300021479	Soil	MEELIEIDIEIEQESEEVRVYAWRVEQLAKLGFSTVIADAIANLVDWHEIARLVEKGCPPEVALEIAR
Ga0207699_104661421	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MEEAIETGIDEESEEVRIHAWRAEQLGKLGFSTIIAEAVADVVDWHEVAPLVAKGCPLALALEIAR
Ga0207684_101882512	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEEPLDIEIEKESEEVRIYAWRVEQLAKLGLSTVIANAVATFVDWHEVSRLVEKGCPPELALEIAR
Ga0207684_114149532	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEEPIDIEIEEESEEVRVYAWRVEQLGRLGLSTVIADAVANLVDWHEVARLVQRGCPPELALEIAR
Ga0207684_115154172	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MEELIDIEIEAENEEVRIYAWRVEQLAKLGLSTVIANAVATFVDWHDVARLVEKGCPPELALEIAR
Ga0207646_1001094612	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEEAIDIEIEKESEEVRIYAWRVEQLAKLGLSTVIANAVATIVDWHDVARLVEKGCPPELALEIAR
Ga0207646_102133473	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEDLIDIEIEKESEEVRVYAWRVEQLAKLGLSNVIADAVANLVDWHEVARLVQKGCPPELALEIAR
Ga0207646_103543062	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEEAMEIEIEKESEEIRVYAWRVEQLAKLGLSAVIADVVANFVDWHEVARLVEKGCPPDLALEIAR
Ga0207646_103690812	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MEEQIDIEIEKESEEVRVYAWRVEQLGKLGLSTMIADAVANLVDWHDVARLVHKGCPPELALEIAR
Ga0207664_117786182	3300025929	Agricultural Soil	MEEPIDIEIEKESEEVRVYAWRVEQLGRLGLSTLIADAVANLVDWHEVARLVQKGCPPELALEIAR
Ga0207683_105405012	3300026121	Miscanthus Rhizosphere	MEEAIETGIDEESEEVRIHAWRAEQLGKLGFSTVIAEAVADVVDWHEVAPLVAKGCPLALALEIAR
Ga0209580_100767363	3300027842	Surface Soil	MEETLDIEIEKESEEVRVYAWRVEQLARLGLSTIMAYAVANFVDWHDVARLVQKGCPPELALEIAR
Ga0318534_106572901	3300031544	Soil	MEEPFENEKESEELQVYAWRIEQLAKLGLPSLIADRVANDVDWHDVARLVDRGCPLDLAVEIAR
Ga0307469_118924032	3300031720	Hardwood Forest Soil	MEELIDIETETSEEARVNAWRVEQLANLGLSTVIANAVATFVDWHDVARLVEKVCPADLALENAR
Ga0307477_103439531	3300031753	Hardwood Forest Soil	MEETLDIEIEKESEEVRVYAWRVEQLARLGLSTIMAYAVANFVDWHDVARLVQKGCPPELALEI
Ga0318564_102010651	3300031831	Soil	MEEPFENEKESEELQVYAWRIEQLAKLGLPSLIADRVANDVDWHDVARLVDRGCPLDLA
Ga0306925_107720993	3300031890	Soil	EPFENEKESEELQVYAWRIEQLAKLGLPSLIADRVANDVDWHDVARLVDRGCPLDLAVEIAR
Ga0307479_102725801	3300031962	Hardwood Forest Soil	MEELIDIEIEKESEEVRVYAWRVEQLQKLGLSTVIADAVANLVDWHEVARLVQKGCPPELALEIAR
Ga0307479_104759473	3300031962	Hardwood Forest Soil	EIEKESEEVRVYAWRVEQLAKLGLSTAIADAVANLVDWHEVARLVEKGCPPELALEIAR
Ga0307471_1006076702	3300032180	Hardwood Forest Soil	MEEPIDIEIEKESEEVRVYAWRVEQLGKLGLSTLIADAVANLVDWHEVARLVQKGCPPELALEIAR
Ga0307471_1020237322	3300032180	Hardwood Forest Soil	IEKESEEVRVYAWRVEQLGKLGLSTMIADAVANVVDWHEVARLVQKGCPPELALEIAR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F098091

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences