NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F098083

Metagenome Family F098083

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098083
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 51 residues
Representative Sequence MKSWIGFLVKLTSFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKEL
Number of Associated Samples 85
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 1.92 %
% of genes near scaffold ends (potentially truncated) 36.54 %
% of genes from short scaffolds (< 2000 bps) 84.62 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (76.923 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Strait → Unclassified → Seawater
(26.923 % of family members)
Environment Ontology (ENVO) Unclassified
(87.500 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(92.308 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 59.26%    β-sheet: 0.00%    Coil/Unstructured: 40.74%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.246.3.1: FLJ32549 domain-liked2gnxa12gnx0.90054
a.24.19.0: automated matchesd5mawe_5maw0.89881
a.24.19.0: automated matchesd3iqca_3iqc0.88139
a.24.9.1: alpha-catenin/vinculind1l7ca21l7c0.86531
a.102.1.4: Glycosyltransferase family 36 C-terminal domaind1v7va11v7v0.86284


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF13385Laminin_G_3 2.88
PF09206ArabFuran-catal 1.92
PF04545Sigma70_r4 0.96



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A76.92 %
All OrganismsrootAll Organisms23.08 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10078940Not Available1311Open in IMG/M
3300000117|DelMOWin2010_c10041519All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2118Open in IMG/M
3300000949|BBAY94_10111319Not Available749Open in IMG/M
3300001347|JGI20156J14371_10083175Not Available1111Open in IMG/M
3300001450|JGI24006J15134_10020589All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3040Open in IMG/M
3300001450|JGI24006J15134_10135012Not Available830Open in IMG/M
3300001450|JGI24006J15134_10184715Not Available650Open in IMG/M
3300001460|JGI24003J15210_10030382Not Available1972Open in IMG/M
3300001460|JGI24003J15210_10114666Not Available745Open in IMG/M
3300001965|GOS2243_1049837Not Available633Open in IMG/M
3300005239|Ga0073579_1061494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Parvibaculum → unclassified Parvibaculum → Parvibaculum sp.1276Open in IMG/M
3300006026|Ga0075478_10010094All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3219Open in IMG/M
3300006029|Ga0075466_1012230All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2909Open in IMG/M
3300006029|Ga0075466_1023344Not Available1983Open in IMG/M
3300006164|Ga0075441_10001332Not Available11899Open in IMG/M
3300006735|Ga0098038_1083211Not Available1119Open in IMG/M
3300006749|Ga0098042_1073126Not Available897Open in IMG/M
3300006752|Ga0098048_1008207All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3829Open in IMG/M
3300006867|Ga0075476_10030781All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2251Open in IMG/M
3300006924|Ga0098051_1015328All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2267Open in IMG/M
3300007234|Ga0075460_10035110All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1932Open in IMG/M
3300008012|Ga0075480_10073859All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1951Open in IMG/M
3300008012|Ga0075480_10424117Not Available652Open in IMG/M
3300009071|Ga0115566_10736120Not Available545Open in IMG/M
3300009077|Ga0115552_1450219Not Available506Open in IMG/M
3300009420|Ga0114994_10620658Not Available708Open in IMG/M
3300009433|Ga0115545_1325559Not Available509Open in IMG/M
3300009435|Ga0115546_1280954Not Available568Open in IMG/M
3300009437|Ga0115556_1231224Not Available661Open in IMG/M
3300009498|Ga0115568_10092794Not Available1508Open in IMG/M
3300009512|Ga0115003_10095600Not Available1832Open in IMG/M
3300012928|Ga0163110_10425520Not Available999Open in IMG/M
3300012953|Ga0163179_10197473Not Available1537Open in IMG/M
3300017697|Ga0180120_10033578All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2361Open in IMG/M
3300017697|Ga0180120_10326452Not Available610Open in IMG/M
3300017705|Ga0181372_1004921Not Available2620Open in IMG/M
3300017706|Ga0181377_1028608Not Available1166Open in IMG/M
3300017708|Ga0181369_1027429Not Available1356Open in IMG/M
3300017709|Ga0181387_1050951Not Available824Open in IMG/M
3300017710|Ga0181403_1026456All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1228Open in IMG/M
3300017710|Ga0181403_1070598Not Available726Open in IMG/M
3300017710|Ga0181403_1075101Not Available703Open in IMG/M
3300017710|Ga0181403_1126052Not Available534Open in IMG/M
3300017713|Ga0181391_1084203Not Available725Open in IMG/M
3300017714|Ga0181412_1034893All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1335Open in IMG/M
3300017717|Ga0181404_1021944Not Available1646Open in IMG/M
3300017719|Ga0181390_1152048Not Available581Open in IMG/M
3300017724|Ga0181388_1013683All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2073Open in IMG/M
3300017728|Ga0181419_1026198Not Available1612Open in IMG/M
3300017728|Ga0181419_1052411All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1061Open in IMG/M
3300017729|Ga0181396_1100038Not Available592Open in IMG/M
3300017729|Ga0181396_1104433Not Available580Open in IMG/M
3300017740|Ga0181418_1087384Not Available758Open in IMG/M
3300017741|Ga0181421_1069106Not Available928Open in IMG/M
3300017742|Ga0181399_1081921Not Available811Open in IMG/M
3300017746|Ga0181389_1049991Not Available1223Open in IMG/M
3300017748|Ga0181393_1046833Not Available1190Open in IMG/M
3300017750|Ga0181405_1164297Not Available545Open in IMG/M
3300017751|Ga0187219_1110307Not Available826Open in IMG/M
3300017753|Ga0181407_1070217Not Available900Open in IMG/M
3300017753|Ga0181407_1126110Not Available637Open in IMG/M
3300017763|Ga0181410_1067015Not Available1076Open in IMG/M
3300017772|Ga0181430_1083085Not Available965Open in IMG/M
3300017772|Ga0181430_1232205Not Available522Open in IMG/M
3300017776|Ga0181394_1040455All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1602Open in IMG/M
3300017776|Ga0181394_1077383Not Available1083Open in IMG/M
3300020185|Ga0206131_10241832Not Available849Open in IMG/M
3300020185|Ga0206131_10259424Not Available804Open in IMG/M
3300020282|Ga0211667_1021384Not Available1693Open in IMG/M
3300020400|Ga0211636_10190700Not Available800Open in IMG/M
3300020404|Ga0211659_10134235Not Available1128Open in IMG/M
3300020438|Ga0211576_10364908Not Available742Open in IMG/M
3300020469|Ga0211577_10431812Not Available809Open in IMG/M
3300021347|Ga0213862_10065734Not Available1285Open in IMG/M
3300021365|Ga0206123_10244891Not Available781Open in IMG/M
3300021957|Ga0222717_10176565All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1282Open in IMG/M
3300022065|Ga0212024_1088753Not Available551Open in IMG/M
3300022068|Ga0212021_1091187Not Available625Open in IMG/M
(restricted) 3300023109|Ga0233432_10387353Not Available616Open in IMG/M
(restricted) 3300023210|Ga0233412_10065886Not Available1489Open in IMG/M
3300024508|Ga0228663_1094910Not Available542Open in IMG/M
3300025070|Ga0208667_1029586All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage989Open in IMG/M
3300025083|Ga0208791_1073585Not Available561Open in IMG/M
3300025099|Ga0208669_1084415Not Available679Open in IMG/M
3300025120|Ga0209535_1014618All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4212Open in IMG/M
3300025120|Ga0209535_1136304Not Available803Open in IMG/M
3300025168|Ga0209337_1239886Not Available703Open in IMG/M
3300025508|Ga0208148_1100005Not Available625Open in IMG/M
3300025610|Ga0208149_1016559All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2144Open in IMG/M
3300025645|Ga0208643_1174095Not Available527Open in IMG/M
3300025759|Ga0208899_1024293Not Available2961Open in IMG/M
3300025803|Ga0208425_1013018All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2282Open in IMG/M
3300025803|Ga0208425_1016820Not Available1966Open in IMG/M
3300025816|Ga0209193_1052430Not Available1127Open in IMG/M
3300025818|Ga0208542_1088555Not Available905Open in IMG/M
3300026505|Ga0228647_1025643All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1546Open in IMG/M
3300027522|Ga0209384_1002561All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage8328Open in IMG/M
3300027788|Ga0209711_10313563Not Available673Open in IMG/M
(restricted) 3300028045|Ga0233414_10069171Not Available1483Open in IMG/M
3300028196|Ga0257114_1091231All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1256Open in IMG/M
3300031519|Ga0307488_10240682Not Available1199Open in IMG/M
3300031519|Ga0307488_10361664Not Available911Open in IMG/M
3300031519|Ga0307488_10367274Not Available901Open in IMG/M
3300031605|Ga0302132_10147626Not Available1161Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater26.92%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine21.15%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous15.38%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine6.73%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine6.73%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater2.88%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater2.88%
Sackhole BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine2.88%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater2.88%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.92%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine1.92%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater0.96%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.96%
Surface SeawaterEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater0.96%
MarineEnvironmental → Aquatic → Marine → Inlet → Unclassified → Marine0.96%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.96%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.96%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine0.96%
Macroalgal SurfaceHost-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface0.96%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300000949Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94Host-AssociatedOpen in IMG/M
3300001347Pelagic Microbial community sample from North Sea - COGITO 998_met_06EnvironmentalOpen in IMG/M
3300001450Marine viral communities from the Pacific Ocean - LP-53EnvironmentalOpen in IMG/M
3300001460Marine viral communities from the Pacific Ocean - LP-28EnvironmentalOpen in IMG/M
3300001965Marine microbial communities from Coastal Floreana, Equador - GS028EnvironmentalOpen in IMG/M
3300005239Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of MaineEnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006029Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNAEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006735Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaGEnvironmentalOpen in IMG/M
3300006749Marine viral communities from the Subarctic Pacific Ocean - 9_ETSP_OMZ_AT15188 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006867Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300006924Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaGEnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300008012Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNAEnvironmentalOpen in IMG/M
3300009071Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405EnvironmentalOpen in IMG/M
3300009077Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328EnvironmentalOpen in IMG/M
3300009420Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152EnvironmentalOpen in IMG/M
3300009433Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330EnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009498Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426EnvironmentalOpen in IMG/M
3300009512Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88EnvironmentalOpen in IMG/M
3300012928Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaGEnvironmentalOpen in IMG/M
3300012953Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 MetagenomeEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017708Marine viral communities from the Subarctic Pacific Ocean - Lowphox_04 viral metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017710Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 26 SPOT_SRF_2011-09-28EnvironmentalOpen in IMG/M
3300017713Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017717Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 27 SPOT_SRF_2011-10-25EnvironmentalOpen in IMG/M
3300017719Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21EnvironmentalOpen in IMG/M
3300017724Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17EnvironmentalOpen in IMG/M
3300017728Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24EnvironmentalOpen in IMG/M
3300017729Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 19 SPOT_SRF_2011-01-11EnvironmentalOpen in IMG/M
3300017740Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13EnvironmentalOpen in IMG/M
3300017741Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 44 SPOT_SRF_2013-06-19EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017746Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 12 SPOT_SRF_2010-06-29EnvironmentalOpen in IMG/M
3300017748Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 16 SPOT_SRF_2010-10-21EnvironmentalOpen in IMG/M
3300017750Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29EnvironmentalOpen in IMG/M
3300017751Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21 (version 2)EnvironmentalOpen in IMG/M
3300017753Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 30 SPOT_SRF_2012-01-26EnvironmentalOpen in IMG/M
3300017763Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20EnvironmentalOpen in IMG/M
3300017772Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10EnvironmentalOpen in IMG/M
3300017776Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020282Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX556074-ERR599169)EnvironmentalOpen in IMG/M
3300020400Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)EnvironmentalOpen in IMG/M
3300020404Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX555954-ERR598978)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300020469Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)EnvironmentalOpen in IMG/M
3300021347Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266EnvironmentalOpen in IMG/M
3300021365Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022068Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)EnvironmentalOpen in IMG/M
3300023109 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_122_August2016_10_MGEnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300024508Seawater microbial communities from Monterey Bay, California, United States - 77DEnvironmentalOpen in IMG/M
3300025070Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025083Marine viral communities from the Subarctic Pacific Ocean - 11_ETSP_OMZ_AT15265 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025099Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025168Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)EnvironmentalOpen in IMG/M
3300025508Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025610Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025645Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025816Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)EnvironmentalOpen in IMG/M
3300025818Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300026505Seawater microbial communities from Monterey Bay, California, United States - 59DEnvironmentalOpen in IMG/M
3300027522Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027788Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)EnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300028196Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI112_10mEnvironmentalOpen in IMG/M
3300031519Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2EnvironmentalOpen in IMG/M
3300031605Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1007894013300000116MarineMKIWIGFLVKLTSFILTGYYVSTGNYEGAALFFMVYLGELCGSICESIENKKL*
DelMOWin2010_1004151973300000117MarineMIHFWVKLLSFILTGYFVSVGNWESAALFFMVYLGELCGSICESIENKEL*
BBAY94_1011131923300000949Macroalgal SurfaceMINFWVKLISFILTGVFVGMGNWESAALFFMLYLGELSQSVAQSICETIENKQS*
JGI20156J14371_1008317513300001347Pelagic MarineMKSWIGFLVKLTSFILTGYYVSTGNWEGAALFFMLYLGELSGSICEAIENKEL*
JGI24006J15134_10020589103300001450MarineMKSWIGFLVKLTSFILTGYYVSTGDWEGAALFFMVYLGELCGSICETIENKEL*
JGI24006J15134_1013501233300001450MarineSLGFWIKMTSFILTGYFVSTGSWSSAALFFMVYLGELGQSIADTIENIQL*
JGI24006J15134_1018471513300001450MarineMKSWIGFLVKLTSFILTGYFVSTGNWESAALFFMVYLGELCGSICESIENIES*
JGI24003J15210_1003038233300001460MarineMKSLGFWIKMTSFILTGYFVSTGSWSSAALFFMVYLGELGQSIADTIENIQL*
JGI24003J15210_1011466623300001460MarineMIHFWVKLISFILTGYYVSTGDWEGAALFFMVYLGELCGSICETIENKEL*
GOS2243_104983733300001965MarineMKSLGFWIKLTSFILTGYFVQTGDWASAALFFMVYIGELCGSICESIENKEL*
Ga0073579_106149423300005239MarineMTHFWVKLLSFILTGVFVGMGNWESAALFFMVYLGELSGSICEAIENKDYEL*
Ga0075478_10010094103300006026AqueousMKSWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGSICETIENKES*
Ga0075466_101223023300006029AqueousMIHFWVKLLSFILTGVFVGMGNWESAALFFMVYLGELCGSICETIENKEL*
Ga0075466_102334453300006029AqueousMKSWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGSICETIENKEL*
Ga0075441_1000133263300006164MarineMKNYWIGFWVKLLSFVLTGYFVGTGSYSNAALCFMLYIGELAQSIADNIENKEL*
Ga0098038_108321133300006735MarineMKNLGFWVKIVSFILTGYYVYTCNYTAAALWFMLYLGELAQSIGDVIENKEL*
Ga0098042_107312613300006749MarineMKSLGFWIKLTSFILTGYFVQTGDWGSAVLFFMVYIGELCGTICEYI
Ga0098048_100820713300006752MarineMKSWIGFLVKLTSFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKEL*
Ga0075476_1003078183300006867AqueousLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGSICETIENKES*
Ga0098051_101532883300006924MarineMKSWIGFLVKLTSFILTGYYVSTGNWEGAALFFMLYLGEL*
Ga0075460_1003511013300007234AqueousMIHFWVKLLSFILTGVFVGMGNWESAALFFMVYLGELCGSICESIENKEL*
Ga0075480_1007385973300008012AqueousWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGSICETIENKES*
Ga0075480_1042411733300008012AqueousWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGSICETIENKEL*
Ga0115566_1073612013300009071Pelagic MarineMIHFWVKLLSFILTGVFVGMGNWESAALFFMVYLGELCGSICEAIENKEL*
Ga0115552_145021913300009077Pelagic MarineMKSWIGFLVKLTSFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKES*
Ga0114994_1062065813300009420MarineMKNYWIGFWVKLLSFILTGYYVSTGNWEGAAVFFMLYLGELCGSICEAIENEKS*
Ga0115545_132555923300009433Pelagic MarineMKSWIGFLIKLTSFICTGYYVSTGNWEGAALFFMVYLGELCGSICESIENKEL*
Ga0115546_128095413300009435Pelagic MarineMKSWIGFLVKLTSFIMTGYYVSTGNWEGAVLFFMLYLGELCGSICEAIENKES*
Ga0115556_123122413300009437Pelagic MarineMKSWISFLVKLTSFLLTGYYVSTGNWEGAALFFMLYLGELSGSICEAIENKEL*
Ga0115568_1009279413300009498Pelagic MarineKLEVMKSWIGFLIKLTSFILTGYYVSTGNWEGAALFFMLYLGELSGSICEAIENKEL*
Ga0115003_1009560053300009512MarineMKNYWIGFWVKLLSFILTGYYVSTGNWEGAAVFFMLYLGELCGSICVSIENKKS*
Ga0163110_1042552013300012928Surface SeawaterMKNLGFWVKIVSFILTGYYVYTCNYTAAALWFMLYLGELAQSIGDVIENKE*
Ga0163179_1019747313300012953SeawaterMIHFWVKLLSFILTGVFVGMGNWESAALFFMLYLGELCGSICETIENKEL*
Ga0180120_1003357873300017697Freshwater To Marine Saline GradientMKSWIGFLVKLTSFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKES
Ga0180120_1032645213300017697Freshwater To Marine Saline GradientMKNYWIGFWVKLLSFILTGYYVSTGNWEGAAVFFMLYLGELCGSICESIENKES
Ga0181372_100492113300017705MarineMIHFWVKLISFILTGVFVGMGNWESAALFFMVYLGELCGSICEAIENKEL
Ga0181377_102860833300017706MarineMIHFWVKLLSFILTGVFVGMGNWESAALFFMLYLGELCGSICETIENKEL
Ga0181369_102742933300017708MarineMKNLGFWVKIVSFILTGYYVYTCNYTAAALWFMLYLGELAQSIGDVIENKEL
Ga0181387_105095123300017709SeawaterMIHFWVKLLSFILTGVFVGMGNWESAALFFMLYLGELCGSICESIENKEV
Ga0181403_102645613300017710SeawaterHFWVKLISFILTGVFVGMGNWESAALFFMVYLGELCGSICEAIENKES
Ga0181403_107059813300017710SeawaterMIHFWVKLISFILTGVFVGMGNWESAALFFMVYLGELCGSICE
Ga0181403_107510123300017710SeawaterMKSWIGFLVKLTSFIMTAYYVSTGDWEGAVLFFMLYLGELCGSICETIENKEL
Ga0181403_112605213300017710SeawaterMIHFWVKLISFILTGVFVGMGNWESAALFFMLYLGELCGSICESIENKEV
Ga0181391_108420313300017713SeawaterICYIINIKLEVMIHFWVKLLSFILTGVFVGMGNWESAALFFMLYLGELCGSICESIENKE
Ga0181412_103489313300017714SeawaterMKSWIGFLVKLTSFIMTAYYVSTGDWEGAVLFFMLYLGELCGSICEAIENKES
Ga0181404_102194423300017717SeawaterMKSWIGFLVKLTSFIMTGYYVSTGNWEGAVLFFMLYLGELCGSICEAIENKES
Ga0181390_115204823300017719SeawaterLEVMIHFWVKLLAFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKEL
Ga0181388_101368313300017724SeawaterKEICYIINIKLEVMIHFWVKLLAFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKEL
Ga0181419_102619813300017728SeawaterMIHFWVKLLSYILTGVFVGMGNWESAALFFMLYLGELCGSICESIENKEV
Ga0181419_105241153300017728SeawaterSWIGFLVKLTSFIMTAYYVSTGDWEGAVLFFMLYLGELCGSICEAIENKES
Ga0181396_110003823300017729SeawaterCYIINIKLEVMIHFWVKLISFILTGVFVGMGNWESAALFFMVYLGELCGSICEAIENKES
Ga0181396_110443323300017729SeawaterMKSLSFWVKLISFILTGYCMSTGSYASAVLWFMIYLGELCGSICESVENIES
Ga0181418_108738413300017740SeawaterEICYIINIKLEVMIHFWVKLISFILTGVFVGMGNWESAALFFMVYLGELCGSICEAIENKES
Ga0181421_106910613300017741SeawaterMKSWIGFLVKLTSFIMTAYYVSTGDWEGAVLFFMVYLGELCGSICEAIENKES
Ga0181399_108192113300017742SeawaterMIHFWVKLLSFILTGVFVGMGNWESAALFFMVYLGELCGSICEAIENKES
Ga0181389_104999133300017746SeawaterFWVKLLAFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKES
Ga0181393_104683353300017748SeawaterIINIKLEVMIHFWVKLLAFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKES
Ga0181405_116429723300017750SeawaterILTGVFVGMGNWESAALFFMVYLGELCGSICEAIENKES
Ga0187219_111030733300017751SeawaterFILTGYYVSTGNWEGAALFFMLYLGELCGSICESIENKEV
Ga0181407_107021713300017753SeawaterMKSLSFWVKLISFILTGYCMSTGSYASAVLWFMIYLGELCGSICESIENIEV
Ga0181407_112611023300017753SeawaterMKSWIGFLVKLTSFIMTAYYVSTGDWEGAVLFFMVYLGELCGSICETIENKEL
Ga0181410_106701513300017763SeawaterAFILTGYYVSTGNWEGAALFFMLYLGELCGSICESIENKEV
Ga0181430_108308513300017772SeawaterEVMKSWIGFLVKLTSFIMTAYYVSTGDWEGAVLFFMLYLGELCGSICETIENKEL
Ga0181430_123220513300017772SeawaterINIKLEVMKSWIGFLVKLTSFIMTAYYVSTGDWEGAVLFFMLYLGELCGSICEAIENKES
Ga0181394_104045513300017776SeawaterICYIINIKLEVMKSWIGFLVKLTSFIMTGYYVSTGNWEGAVLFFMLYLGELCGSICEAIENKES
Ga0181394_107738343300017776SeawaterMKSLSFWVKLISFILTGYCMSTGSYASAVLWFMIYLGELCGSICEAIENKES
Ga0206131_1024183233300020185SeawaterILTGYYVSTGNWEGAALFFMLYLGELSGSICEAIENKEL
Ga0206131_1025942413300020185SeawaterMKSWIGFLVKLTSFILTGYYVSTGNWEGAALFFMLYLGELS
Ga0211667_102138453300020282MarineMKSLGFWIKLTSFILTGYFVQTGDWASAALFFMVYLGELCGSICESIENKEL
Ga0211636_1019070013300020400MarineMKSWVGFLIKLTSFILTGYFVQTGDWASAALFFMVYIGELCGTICESIENKEL
Ga0211659_1013423533300020404MarineMIHFWVKLISFILTGVFVGMGNWESAALFFMVYLGELCGSICETIENKEL
Ga0211576_1036490813300020438MarineMIHFWVKLLAFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKES
Ga0211577_1043181213300020469MarineMIHFWVKLLAFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKEL
Ga0213862_1006573443300021347SeawaterMIHFWVKLLSFILTGYFVSVGNWESAALFFMVYLGELCGSICESIENKEL
Ga0206123_1024489123300021365SeawaterMKSWIGFLVKLTSFIMTGYYVSTGNWEGAVLFFMLYLGELCGSICETIENKES
Ga0222717_1017656553300021957Estuarine WaterCYIINIKLEVMKSLSFWVKLISFILTGYCMSTGSYASAVLWFMIYLGELCGSICESVENIES
Ga0212024_108875313300022065AqueousMKSWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGSI
Ga0212021_109118713300022068AqueousMKSWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGSICETIENKES
(restricted) Ga0233432_1038735313300023109SeawaterMKSWIGFLVKLTSFILTGYYVSMGNWEGAALFFMLYLGELC
(restricted) Ga0233412_1006588633300023210SeawaterMKSWIGFLVKLTSFILTGYYVSMGNWEGAALFFMLYLGELCGSICEAIENTKS
Ga0228663_109491023300024508SeawaterIINIKLEVMIHFWVKLISFILTGVFVGMGNWESAALFFMVYLGELCGSICEAIENKES
Ga0208667_102958613300025070MarineMKSWIGFLVKLTSFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKEL
Ga0208791_107358513300025083MarineYIINIKLEVMKSWIGFLVKLTSFILTGYYVSTGNWEGAALFFMLYLGELCGSICETIENKEL
Ga0208669_108441523300025099MarineMISFWVKLLAFILTGYFVSTGNWASAALFFMLYLGELAQSIGDVIENKEL
Ga0209535_1014618133300025120MarineMIHFWVKLISFILTGYFVSTGSWSSAALFFMVYLGELCGSICETIENKEL
Ga0209535_113630433300025120MarineMKSLGFWIKMTSFILTGYFVSTGSWSSAALFFMVYLGELGQSIADTIENIQL
Ga0209337_123988613300025168MarineEVMKSLGFWIKMTSFILTGYFVSTGSWSSAALFFMVYLGELGQSIADTIENIQL
Ga0208148_110000513300025508AqueousMIHFWVKLLSFILTGVFVGMGNWESAALFFMVYLGELCGSICETIENKEL
Ga0208149_101655913300025610AqueousILTGVFVGMGNWESAALFFMVYLGELCGSICESIENKEL
Ga0208643_117409523300025645AqueousMKSWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGSICETIENKEL
Ga0208899_102429343300025759AqueousMKSWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGS
Ga0208425_101301883300025803AqueousCYIINIKLEVMKSWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGSICETIENKES
Ga0208425_101682033300025803AqueousMKSWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLY
Ga0209193_105243033300025816Pelagic MarineMKSWIGFLVKLTSFIMTGYYVSTGNWEGAVLFFMLYLGELCGSICESIENKEL
Ga0208542_108855543300025818AqueousKEICYIIYIKLEVMKSWIGFLIKLTSFILTGYFVSTGNWEGAALFFMLYLSELCGSICETIENKES
Ga0228647_102564353300026505SeawaterMIHFWVKLISFILTGVFVGMGNWESAALFFMVYLGELCGSICEAIENKES
Ga0209384_100256113300027522MarineMKNYWIGFWVKLLSFVLTGYFVGTGSYSNAALCFMLYIGELAQSIADNIENKEL
Ga0209711_1031356313300027788MarineMKNYWIGFWVKLLSFILTGYYVSTGNWEGAAVFFMLYLGELCGSICVAIENKKS
(restricted) Ga0233414_1006917143300028045SeawaterMKSWIGFLVKLTSFILTGYYVSMCNWEGAALFFMLYLGELCGSICEAIENTKS
Ga0257114_109123113300028196MarineMKSWIGFLVKLTSFIMTGYYVSTGNWEGAALFFMVYLGELCGSICEAIENTKS
Ga0307488_1024068213300031519Sackhole BrineIGFWVKLLSFILTGYYVSTGNWEGAAVFFMLYLGELCGSICVAIENKKS
Ga0307488_1036166423300031519Sackhole BrineMKSWIGFLVKLLSFILTGYYVSMGNWEGAALFFMLYLGELCGSICESIENTKS
Ga0307488_1036727413300031519Sackhole BrineIGFWVKLLSFILTGYYVSTGNWEGAAVFFMLYLGELCGSICVSIENTKS
Ga0302132_1014762653300031605MarineMKNYWIGFWVKLLSFILTGYYVSTGNWEGAAVFFMLYLGELCGSICVSIENTKS


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