Metagenome Family F098074

Overview

Basic Information

• Family ID: F098074
• Family Type: Metagenome
• Number of Sequences: 104
• Average Sequence Length: 65 residues
• Representative Sequence: MVDQTQEEILEVQTKNKQIKYAADTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
• Number of Associated Samples: 71
• Number of Associated Scaffolds: 104

Quality Assessment

• Transcriptomic Evidence: No
• Most common taxonomic group: Unclassified
• % of genes with valid RBS motifs: 93.27 %
• % of genes near scaffold ends (potentially truncated): 13.46 %
• % of genes from short scaffolds (< 2000 bps): 84.62 %
• Associated GOLD sequencing projects: 61
• AlphaFold2 3D model prediction: No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Unclassified (33.654 % of family members)
• NCBI Taxonomy ID: N/A
• Taxonomy: N/A

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (36.538 % of family members)
• Environment Ontology (ENVO): Unclassified (77.885 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Saline → Water (saline) (72.115 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 78.46%
  β-sheet: 0.00%
  Coil/Unstructured: 21.54%

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF10979	DUF2786	3.85
PF01612	DNA_pol_A_exo1	1.92
PF08708	PriCT_1	0.96
PF03721	UDPG_MGDP_dh_N	0.96
PF00476	DNA_pol_A	0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.96
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.96
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.96
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.96

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.35 %
Unclassified	root	N/A	33.65 %

Level 2

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	66.35 %
Unclassified	root	N/A	33.65 %

Level 3

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.65 %
environmental samples	no rank	All Organisms → Viruses → environmental samples	29.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.65 %

Level 4

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.65 %
uncultured virus	species	All Organisms → Viruses → environmental samples → uncultured virus	29.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	8.65 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000115|DelMOSum2011_c10092248	Not Available	1017
3300000116|DelMOSpr2010_c10178397	Not Available	699
3300000116|DelMOSpr2010_c10224954	All Organisms → Viruses → environmental samples → uncultured virus	586
3300000116|DelMOSpr2010_c10248875	All Organisms → Viruses → environmental samples → uncultured virus	542
3300001450|JGI24006J15134_10089047	All Organisms → Viruses → environmental samples → uncultured virus	1134
3300001450|JGI24006J15134_10097502	All Organisms → Viruses → Predicted Viral	1062
3300001450|JGI24006J15134_10122757	Not Available	894
3300001450|JGI24006J15134_10156156	Not Available	742
3300001589|JGI24005J15628_10103212	Not Available	953
3300001589|JGI24005J15628_10148477	Not Available	715
3300004457|Ga0066224_1068003	All Organisms → Viruses	1064
3300005239|Ga0073579_1172261	Not Available	28818
3300005239|Ga0073579_1667173	All Organisms → Viruses → environmental samples → uncultured virus	739
3300005912|Ga0075109_1010801	Not Available	4060
3300005913|Ga0075108_10127380	All Organisms → Viruses → environmental samples → uncultured virus	920
3300005914|Ga0075117_1216003	Not Available	530
3300005918|Ga0075116_10181826	All Organisms → Viruses → environmental samples → uncultured virus	799
3300006164|Ga0075441_10033816	Not Available	2070
3300006164|Ga0075441_10049360	All Organisms → Viruses → environmental samples → uncultured virus	1672
3300006165|Ga0075443_10364900	Not Available	538
3300006190|Ga0075446_10003110	Not Available	6414
3300006190|Ga0075446_10106867	Not Available	816
3300006190|Ga0075446_10139014	All Organisms → Viruses → environmental samples → uncultured virus	696
3300006193|Ga0075445_10148014	All Organisms → Viruses → environmental samples → uncultured virus	845
3300006352|Ga0075448_10143260	Not Available	741
3300006916|Ga0070750_10174570	All Organisms → Viruses → environmental samples → uncultured virus	963
3300006919|Ga0070746_10263065	Not Available	802
3300006947|Ga0075444_10010097	Not Available	5223
3300006947|Ga0075444_10291900	Not Available	631
3300007276|Ga0070747_1168005	Not Available	783
3300007539|Ga0099849_1305661	All Organisms → Viruses → environmental samples → uncultured virus	573
3300007540|Ga0099847_1132778	Not Available	746
3300008221|Ga0114916_1118573	All Organisms → Viruses → environmental samples → uncultured virus	621
3300008470|Ga0115371_10429451	Not Available	729
3300009077|Ga0115552_1046267	All Organisms → Viruses → Predicted Viral	2002
3300009173|Ga0114996_10301597	Not Available	1254
3300009409|Ga0114993_10419952	Not Available	1003
3300009409|Ga0114993_10439649	All Organisms → Viruses → environmental samples → uncultured virus	976
3300009420|Ga0114994_10726606	Not Available	647
3300009420|Ga0114994_10766158	All Organisms → Viruses → environmental samples → uncultured virus	628
3300009420|Ga0114994_10830531	Not Available	600
3300009423|Ga0115548_1277410	All Organisms → Viruses → environmental samples → uncultured virus	514
3300009425|Ga0114997_10241942	Not Available	1020
3300009428|Ga0114915_1036149	All Organisms → Viruses → environmental samples → uncultured virus	1662
3300009507|Ga0115572_10433398	All Organisms → Viruses → environmental samples → uncultured virus	733
3300009512|Ga0115003_10747488	All Organisms → Viruses → environmental samples → uncultured virus	569
3300009512|Ga0115003_10901781	Not Available	513
3300009601|Ga0114914_1004716	Not Available	2533
3300009706|Ga0115002_10551220	Not Available	831
3300009785|Ga0115001_10984044	Not Available	505
3300009786|Ga0114999_10222390	All Organisms → Viruses → environmental samples → uncultured virus	1554
3300009786|Ga0114999_10409150	All Organisms → Viruses → environmental samples → uncultured virus	1065
3300022821|Ga0222673_1046487	All Organisms → Viruses → environmental samples → uncultured virus	534
3300022837|Ga0222711_1001143	All Organisms → Viruses	7026
3300023231|Ga0222689_1007589	All Organisms → Viruses → environmental samples → uncultured virus	1565
3300025071|Ga0207896_1024655	All Organisms → Viruses → Predicted Viral	1035
3300025079|Ga0207890_1048149	All Organisms → Viruses	730
3300025120|Ga0209535_1001808	Not Available	14219
3300025120|Ga0209535_1005893	All Organisms → Viruses	7453
3300025120|Ga0209535_1057652	All Organisms → Viruses → environmental samples → uncultured virus	1608
3300025137|Ga0209336_10049864	All Organisms → Viruses	1305
3300025138|Ga0209634_1231471	All Organisms → Viruses	682
3300025138|Ga0209634_1300290	Not Available	552
3300025168|Ga0209337_1183097	All Organisms → Viruses → environmental samples → uncultured virus	871
3300025237|Ga0208031_1012050	All Organisms → Viruses	1181
3300025266|Ga0208032_1010905	All Organisms → Viruses → environmental samples → uncultured virus	2922
3300025266|Ga0208032_1077348	All Organisms → Viruses	693
3300025266|Ga0208032_1084281	All Organisms → Viruses → environmental samples → uncultured virus	644
3300025276|Ga0208814_1007342	All Organisms → Viruses → Predicted Viral	4132
3300025276|Ga0208814_1024011	All Organisms → Viruses	2003
3300025276|Ga0208814_1098006	All Organisms → Viruses	743
3300025276|Ga0208814_1133348	All Organisms → Viruses	579
3300025769|Ga0208767_1044354	All Organisms → Viruses	2135
3300025816|Ga0209193_1037142	All Organisms → Viruses	1420
3300025876|Ga0209223_10284517	All Organisms → Viruses → environmental samples → uncultured virus	758
3300025889|Ga0208644_1140217	All Organisms → Viruses	1124
3300027522|Ga0209384_1050794	All Organisms → Viruses → Predicted Viral	1119
3300027687|Ga0209710_1128662	All Organisms → Viruses	951
3300027704|Ga0209816_1063009	All Organisms → Viruses	1599
3300027779|Ga0209709_10130350	All Organisms → Viruses → Predicted Viral	1265
3300027779|Ga0209709_10225451	Not Available	851
3300027780|Ga0209502_10397168	Not Available	566
3300027844|Ga0209501_10152572	All Organisms → Viruses → Predicted Viral	1529
(restricted) 3300027861|Ga0233415_10003087	All Organisms → Viruses	6976
3300031519|Ga0307488_10087213	All Organisms → Viruses → Predicted Viral	2306
3300031519|Ga0307488_10167166	All Organisms → Viruses → Predicted Viral	1523
3300031519|Ga0307488_10355631	All Organisms → Viruses	921
3300031519|Ga0307488_10441079	All Organisms → Viruses → environmental samples → uncultured virus	793
3300031519|Ga0307488_10463269	All Organisms → Viruses	766
3300031519|Ga0307488_10480233	All Organisms → Viruses	747
3300031569|Ga0307489_10772466	All Organisms → Viruses	675
3300031569|Ga0307489_11261927	All Organisms → Viruses	534
3300031578|Ga0307376_10450074	Not Available	840
3300031594|Ga0302131_1068906	All Organisms → Viruses	1279
3300031598|Ga0308019_10087053	All Organisms → Viruses	1287
3300031621|Ga0302114_10237932	All Organisms → Viruses	744
3300031627|Ga0302118_10462031	Not Available	562
3300031638|Ga0302125_10051837	All Organisms → Viruses → environmental samples → uncultured virus	1398
3300031638|Ga0302125_10143344	All Organisms → Viruses	763
3300031647|Ga0308012_10360217	All Organisms → Viruses → environmental samples → uncultured virus	569
3300031658|Ga0307984_1120153	All Organisms → Viruses	750
3300031673|Ga0307377_10241291	All Organisms → Viruses	1390
3300033742|Ga0314858_009596	All Organisms → Viruses	1916
3300033742|Ga0314858_054992	All Organisms → Viruses → environmental samples → uncultured virus	970

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	98.08%
Terrestrial	Environmental → Terrestrial	1.92%

Category

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	90.38%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	6.73%
Soil	Environmental → Terrestrial → Soil	1.92%
Sediment	Environmental → Aquatic → Sediment	0.96%

Type

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	49.04%
Coastal	Environmental → Aquatic → Marine → Coastal	17.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified	14.42%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	6.73%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.81%
Pelagic	Environmental → Aquatic → Marine → Pelagic	3.85%
Clay	Environmental → Terrestrial → Soil → Clay	1.92%
Inlet	Environmental → Aquatic → Marine → Inlet	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	49.04%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	17.31%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	14.42%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	6.73%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%

Habitat

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	36.54%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	11.54%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	10.58%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	7.69%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.73%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	3.85%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	3.85%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	3.85%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.88%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	2.88%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.92%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	1.92%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	1.92%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.96%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.96%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.96%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.96%

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental
3300005239	Environmental Genome Shotgun Sequencing: Ocean Microbial Populations from the Gulf of Maine	Environmental
3300005912	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKD	Environmental
3300005913	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UK1	Environmental
3300005914	Saline lake microbial communities from Ace Lake, Antarctica - Antarctic Ace Lake Metagenome 02UKJ	Environmental
3300005918	Saline lake microbial communities from Ace Lake, Antarctica- Antarctic Ace Lake Metagenome 02UKC	Environmental
3300006164	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA	Environmental
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental
3300006190	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA	Environmental
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental
3300006352	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA	Environmental
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental
3300006947	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA	Environmental
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental
3300008221	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66	Environmental
3300008470	Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563	Environmental
3300009077	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110328	Environmental
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental
3300009425	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136	Environmental
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental
3300009507	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607	Environmental
3300009512	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88	Environmental
3300009601	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38	Environmental
3300009706	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86	Environmental
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental
3300022821	Saline water microbial communities from Ace Lake, Antarctica - #801	Environmental
3300022837	Saline water microbial communities from Ace Lake, Antarctica - #1699	Environmental
3300023231	Saline water microbial communities from Ace Lake, Antarctica - #1231	Environmental
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental
3300025079	Marine viral communities from the Pacific Ocean - LP-48 (SPAdes)	Environmental
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental
3300025237	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_38 (SPAdes)	Environmental
3300025266	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66 (SPAdes)	Environmental
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental
3300025876	Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)	Environmental
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental
3300027687	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_138 (SPAdes)	Environmental
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental
3300027779	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_136 (SPAdes)	Environmental
3300027780	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90 (SPAdes)	Environmental
3300027844	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134 (SPAdes)	Environmental
3300027861 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG	Environmental
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental
3300031569	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 1.2	Environmental
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental
3300031598	Marine microbial communities from water near the shore, Antarctic Ocean - #284	Environmental
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental
3300031627	Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1	Environmental
3300031638	Marine microbial communities from Western Arctic Ocean, Canada - CB4_surface	Environmental
3300031647	Marine microbial communities from water near the shore, Antarctic Ocean - #179	Environmental
3300031658	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78	Environmental
3300031673	Soil microbial communities from Risofladan, Vaasa, Finland - TR-3	Environmental
3300033742	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - 2018 seawater	Environmental

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_100922484	3300000115	Marine	MVDQSQEEILEVQIKNKQIKYATDTSKMFDEWLKQCPVVYYLSEKVDEEVNKIIKYTFDKKVRR
DelMOSpr2010_101783971	3300000116	Marine	MVDQSQEEILEVQIKNKQIKYATDTSKMFDEWLKQCPVVYYLSEKVDEEVNKII
DelMOSpr2010_102249542	3300000116	Marine	MVDQTQDEILEVQTKNKQIQYSNDTIKMFDEWLKKCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
DelMOSpr2010_102488752	3300000116	Marine	MVDQTQDEILEVQIKNKQIQYSNDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
JGI24006J15134_100890472	3300001450	Marine	MVDQTQEEILEVQTKNKQVKYAADTSKMFNEWLKKCPVVYYLSEQVDEEDHNKIIKYTFDKKVRRK*
JGI24006J15134_100975022	3300001450	Marine	MVDQTQDEILEVQTKNKQIKYAADTAKMFDEWLKQCPIVYYLSEKIDEEDYNKIIKYTFDKTIRRK*
JGI24006J15134_101227573	3300001450	Marine	MVDQTQEEILEVQTKNKQIKYAADTVKMFDEWLYQCPVVYYLSEKVDEEVNKIIKYTFDKKVRRK*
JGI24006J15134_101561561	3300001450	Marine	MVDQTQEEILEVQTKNKQIKYAADTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
JGI24005J15628_101032122	3300001589	Marine	MVDQTQEEILEVQTKNKQIKYETDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
JGI24005J15628_101484773	3300001589	Marine	MVDQTQEEILEVQTKNKQVKYAADTAQMFDEWLKQCPVVYYLSEKIDEEDYNKIIKYTFDKKVRRK*
Ga0066224_10680033	3300004457	Marine	MVDQTQEEILEVQTKNKQIKYATDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0073579_117226135	3300005239	Marine	MVDQTQEEILEVQIKNKQIKYATDTSKMFDEWLKQCPVVYYLSEQVESEENNTNNFDKKVRRK*
Ga0073579_16671732	3300005239	Marine	MVDQSQEEILEVQIKNKQIKYATDTSKMFDEWLKQCPVIYYLSEDEEVNKIIKYTFDKKVRRK*
Ga0075109_10108019	3300005912	Saline Lake	MVDQTQEEILEVQTKNKQIKYATDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0075108_101273803	3300005913	Saline Lake	MVDQTQEEILEVQTKNKQIKYASDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0075117_12160033	3300005914	Saline Lake	MVDQTQDEILEVQTKNKQIKYATDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYT
Ga0075116_101818262	3300005918	Saline Lake	MVDQTQEEILEVQTKNKQIKYATDTSKMFDEWLKQCPVVSYLSEQVDEEVNKLIRYTFDKKVRRK*
Ga0075441_100338165	3300006164	Marine	MVDQTQDEILEVQTKNKQIKYAADTSKMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDITVRRK*
Ga0075441_100493605	3300006164	Marine	MVDQSQEEILEVQTKNKQIKYTSDTIKMFNEWLKQCPVVYYLSEKVDEEDYNKIIKYTFDKKVRRK*
Ga0075443_103649002	3300006165	Marine	MVDQSQEEEGIQEVQTKNKQIKYTSDTIKMFNEWLKQCPVVYYLSEKVDEEDYNKIIKYTFDKKVRRK*
Ga0075446_100031104	3300006190	Marine	MVDQSQEEILEVQTKNKQIKYTSDTIKMFDEWLKQCPVVYYLSEKVDEEDYNKIIKYTFDKKVRRK*
Ga0075446_101068672	3300006190	Marine	MVDQTQEEILEVQTKNKQIKYAADTSKMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDITVRRK*
Ga0075446_101390143	3300006190	Marine	EEILEVQTKNKQIKYTSDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0075445_101480143	3300006193	Marine	MVDQSQEEEGIQEVQTKNKQIKYASDTAKMFDEWLKQCPVVYYLPEKVDEEDYNKIIKYTFDKKVRRK*
Ga0075448_101432601	3300006352	Marine	MVDQSQEEEGIQEVQTKNKQIKYASDTAKMFDEWLKQCPVVYYLSEKVDEEDYNKIIKYTFDKKVRRK*
Ga0070750_101745702	3300006916	Aqueous	MVDQTQEEILEVQTKNKQIKYAADTTKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0070746_102630652	3300006919	Aqueous	MVDQTQEEILEVQTKNKQIKYAADTTKMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDTTTRRK*
Ga0075444_100100971	3300006947	Marine	MVDQSQEEEGIQEVQTKNKQIKYASDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0075444_102919002	3300006947	Marine	MVDQTQDEILEVQTKNKQIKYAADTSKMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDTTVRRK*
Ga0070747_11680053	3300007276	Aqueous	MVDQTQEEILEVQTKNKQVTYAADTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0099849_13056611	3300007539	Aqueous	QDEILEVQIKNKQIQYANDTVKMFNEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0099847_11327783	3300007540	Aqueous	MVDQTQDEILEVQTKNKQIKYAADTTKMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDTT
Ga0114916_11185732	3300008221	Deep Ocean	MVDQSQEEILEVQTKNKQIKYTSDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0115371_104294512	3300008470	Sediment	MVDQTQEEILEVQTKNKQIKYAADTAQMFDEWLKQCPIVYYLSEPVEPGEACIEYTFDTTVRRK*
Ga0115552_10462676	3300009077	Pelagic Marine	MVDQTQDEILEVQIKNKQIQYSNDTIKMFDKWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKIRRK*
Ga0114996_103015972	3300009173	Marine	MVDQTLEKEGILEVQTKNKQIKYAADTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0114993_104199522	3300009409	Marine	MVDQTQEEILEVQTKNKQIKYANDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0114993_104396491	3300009409	Marine	DQTQDEITALHSANKDRMYKAQTLKLFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0114994_107266062	3300009420	Marine	MVDQTQDEILEVQTKNKQIKYKTDTAKMFDEWLKKCPVKFYFNQNIDYDFTKVQYTFNKTERIE*
Ga0114994_107661582	3300009420	Marine	MVDQTQEEILEVQTKNKQIKYATDTAKMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDTTIRRK*
Ga0114994_108305312	3300009420	Marine	MVDQTQDEILEVQTKNKQIKYATDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0115548_12774102	3300009423	Pelagic Marine	MVDQTQDEILEVQIKNKQIQYSNDTVKMFDKWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0114997_102419422	3300009425	Marine	MVDQTQEEILEVQTKNKQIKYATDTAQMFDEWLKQCPVVYYLSEQVDEQVNKIIKYTFDKKVRRK*
Ga0114915_10361496	3300009428	Deep Ocean	MVDQTQDEILEVQTKNKQIKYATDTAKMFDEWLKQCPVVYYLSEKIDEEDYNKIIKYTFDKKVRRK*
Ga0115572_104333982	3300009507	Pelagic Marine	MVDQTQDEMLEVQIKNKQIQYSNDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0115003_107474882	3300009512	Marine	MVDQTQEEILEVQTKNKQIKYATDTAQMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDTTVRRK*
Ga0115003_109017812	3300009512	Marine	MVDQTQDEILEVQTKNKQIKYANDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRR
Ga0114914_10047165	3300009601	Deep Ocean	MVDQTQDEILEVQTKNKQIKYAADTAQMFDEWLKQCPIVYYLSEPVEPGEACIEYTFDTTVRRK*
Ga0115002_105512203	3300009706	Marine	MVDQTQDEILEVQTKNKQIKYATDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0115001_109840442	3300009785	Marine	MVDQTQEEILEVQTKNKQVKYATDTSKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0114999_102223904	3300009786	Marine	MVDQSQEAILEVQTKNKQIKYAADTAKMFDEWLKQCPVVYYLSEQVDKEVNKIIKYTFDKKVRRK*
Ga0114999_104091502	3300009786	Marine	MVDQTQDEILEVQTKNKQIKYANDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK*
Ga0222673_10464872	3300022821	Saline Water	MVDQTQEEILEVQTKNKQIKYATDTSKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0222711_10011432	3300022837	Saline Water	MVDQTQDEILEVQTKNKQIKYAADTSKMFSEWLKQCPVVYYLSYPVEPGEATIEYVFDKTVRRK
Ga0222689_10075891	3300023231	Saline Water	VMVDQTQEEILEVQTKNKQIKYATDTSKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0207896_10246553	3300025071	Marine	MVDQTQEEILEVQTKNKQIKYETDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0207890_10481491	3300025079	Marine	MVDQTQEEILEVQTKNKQIKYAADTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0209535_100180815	3300025120	Marine	MVDQTQEEILEVQTKNKQVKYAADTSKMFNEWLKKCPVVYYLSEQVDEEDHNKIIKYTFDKKVRRK
Ga0209535_10058932	3300025120	Marine	MVDQTQDEITALHSENKDRMYKIQTLKLFDEWLKQCPVVYYLSEKTDVEKADKIIKYTFDKDRRRK
Ga0209535_10576527	3300025120	Marine	MVDQTQEEILEVQTKNKQIKYAADTAKMFDQWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0209336_100498644	3300025137	Marine	MVDQSQEEILEVQIKNKQIKYATDTSKMFDEWLKQCPVVYYLSEKVDEEVNKIIKYTFDKKVRRK
Ga0209634_12314711	3300025138	Marine	MVDQTQDEILEVQIKNKQIKYANDTAKMFNEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0209634_13002902	3300025138	Marine	MVDQTQEEILEVQTKNKQVKYAADTAQMFDEWLKQCPVVYYLSEKIDEEDYNKIIKYTFDKKVRRK
Ga0209337_11830973	3300025168	Marine	MVDQTQDEILEVQTKNKQIKYETDTAKMFDEWLKQCPVVYYLSEKIDEEDYNKIIKYTFDKKVRRK
Ga0208031_10120502	3300025237	Deep Ocean	MVDQTQDEILEVQTKNKQIKYAADTAQMFDEWLKQCPIVYYLSEPVEPGEACIEYTFDTTVRRK
Ga0208032_101090511	3300025266	Deep Ocean	MVDQSQEEILEVQTKNKQIKYTSDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0208032_10773482	3300025266	Deep Ocean	MVDQTQDEILEVQTKNKQIKYAADTSKMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDITVRRK
Ga0208032_10842813	3300025266	Deep Ocean	MVDQSQEEEGIQEVQTKNKQIKYASDTAKMFDEWLKQCPVVYYLSEKVDEEDYNKIIKYTFDKKVRRK
Ga0208814_10073429	3300025276	Deep Ocean	MVDQSQEEEGIQEVQTKNKQIKYASDTAKMFDEWLKQCPVVYYLPEKVDEEDYNKIIKYTFDKKVRRK
Ga0208814_10240112	3300025276	Deep Ocean	MVDQTQDEILEVQTKNKQIKYATDTAKMFDEWLKQCPVVYYLSEKIDEEDYNKIIKYTFDKKVRRK
Ga0208814_10980063	3300025276	Deep Ocean	MVDQTQEEILEVQTRNKQIKYATDTAKMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDTTVRRK
Ga0208814_11333482	3300025276	Deep Ocean	MVDQTQEEILEVQTKNKQIKYAADTSKMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDITVRRK
Ga0208767_10443546	3300025769	Aqueous	MVDQTQEEILEVQTKNKQIKYAADTTKMFDEWLKQCPIVYYLSEPVEPGEACVEYTFDTTTRRK
Ga0209193_10371421	3300025816	Pelagic Marine	MVDQTQDEILEVQIKNKQIQYSNDTVKMFDKWLKQCPVVYYLSEQVDEEVNKIIKYTF
Ga0209223_102845172	3300025876	Pelagic Marine	MVDQTQDDILEVQIKNKQIQYSNDTVKMFDKWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0208644_11402171	3300025889	Aqueous	MVDQTQDEILEVQIKNKQIQYSNDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0209384_10507944	3300027522	Marine	MVDQSQEEILEVQTKNKQIKYTSDTIKMFNEWLKQCPVVYYLSEKVDEEDYNKIIKYTFDKKVRRK
Ga0209710_11286622	3300027687	Marine	MVDQTQEEILEVQTKNKQIKYATDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0209816_10630093	3300027704	Marine	MVDQSQEEILEVQTKNKQIKYTSDTIKMFDEWLKQCPVVYYLSEKVDEEDYNKIIKYTFDKKVRRK
Ga0209709_101303504	3300027779	Marine	MVDQTQDEILEVQTKNKQIKYKTDTAKMFDEWLKKCPVKFYFNQNIDYDFTKVQYTFNKTERIE
Ga0209709_102254513	3300027779	Marine	MVDQTQEEILEVQTKNKQIKYATDTAQMFDEWLKQCPVVYYLSEQVDEQVNKIIKYTFDKKVRRK
Ga0209502_103971682	3300027780	Marine	MVDQTQDEILEVQTKNKQIKYATDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0209501_101525723	3300027844	Marine	MVDQTLEKEGILEVQTKNKQIKYAADTAKMFDEWLKQCPVVYYLSEQVDKEVNKIIKYTFDKKVRRK
(restricted) Ga0233415_100030873	3300027861	Seawater	MVDQTQEEILEVQTKNKQIKYAADTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0307488_100872133	3300031519	Sackhole Brine	MVDQTQDEILEVQTKNKQIKYETDTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0307488_101671661	3300031519	Sackhole Brine	MVDQTQEEILEVQTKNKQIKYATDTAKMFDDWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0307488_103556312	3300031519	Sackhole Brine	MVDQTQDEILEVQTKNKQIKYANDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0307488_104410793	3300031519	Sackhole Brine	TQDEILEVQTKNKQIKYANDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRR
Ga0307488_104632692	3300031519	Sackhole Brine	MVDQTQEEILEVQTKNKQVTYAADTAKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0307488_104802332	3300031519	Sackhole Brine	MVDQTQEEILEVHTKNKQIKYASDTVKMFDKWLEKCPVKFYLNESLDDDFIKVQYTFTKTERIE
Ga0307489_107724661	3300031569	Sackhole Brine	MVDQTQDEILEVQTKNKQIKYETDTAKMFDEWLYQCPVVYYLSEKVDEEVNKIIKYTFDKKVRRK
Ga0307489_112619272	3300031569	Sackhole Brine	MVDQTQDEILEVQTKNKQIKYAADTAKMFDEWLKQCPIIYYLSEKIDEEDYNKIIKYTFDKKVRRK
Ga0307376_104500743	3300031578	Soil	MVDQTQNEILEVQTKNKQIKYEADTIKMFDEWLKQCPIVYYLSEPVEPGEACIEYTFDTTERRK
Ga0302131_10689065	3300031594	Marine	MVDQTQDEILEVQTKNKQIKYAADTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0308019_100870533	3300031598	Marine	MVDQTQDEILEVQTKNKQIKYAADTAQMFDEWLKQCPIVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0302114_102379322	3300031621	Marine	MVDQTQEEILEVQTKNKQIKYAADTSKMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0302118_104620311	3300031627	Marine	MVDQSQEAILEVQTKNKQIKYAADTAKMFNEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0302125_100518376	3300031638	Marine	MVDQTQDEILEVQTKNKQIKYETDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDKKVRRK
Ga0302125_101433443	3300031638	Marine	MVDQTQDEILEVQTKNKQIKYAADTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDTTVRRK
Ga0308012_103602172	3300031647	Marine	AVMVDQSQEEILEVQTKNKQIKYTSDTAKMFDEWLKQCPVVYYLSEKVDEEDYNKIIKYTFDKKVRRK
Ga0307984_11201532	3300031658	Marine	MVDQTQDEIVEVQTKNKQIKYAADTVKMFDEWLYQCPVVYYLSEKVDEEVNKIIKYTFDKKVRRK
Ga0307377_102412912	3300031673	Soil	MVDQTQNEILEVQTKNKQIKYEADTIKMFDEWLKQCPIVYYLSEPVEPGEACIEYTFDTTVRRK
Ga0314858_009596_1733_1915	3300033742	Sea-Ice Brine	MVDQTQDEILEVQTKNKQIKYANDTAQMFDEWLKQCPVVYYLSEQVDEEVNKIIKYTFDK
Ga0314858_054992_717_917	3300033742	Sea-Ice Brine	MVDQTQEEILEVQTKNKQIKYAADTAQMFDEWLKQCPVVYYLSEKIDEEDYNKIIKYTFDKKVRRK