NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F098066

Metagenome Family F098066

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F098066
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 60 residues
Representative Sequence LVNFNYDPFNDLVKSEVDKALQYLLDHEMISMEWDPDAEEMVFYMTDKQRAMPKPDDWDEKAP
Number of Associated Samples 68
Number of Associated Scaffolds 102

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 71.15 %
% of genes near scaffold ends (potentially truncated) 22.12 %
% of genes from short scaffolds (< 2000 bps) 82.69 %
Associated GOLD sequencing projects 52
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (50.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(62.500 % of family members)
Environment Ontology (ENVO) Unclassified
(98.077 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(84.615 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.67%    β-sheet: 13.19%    Coil/Unstructured: 57.14%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 102 Family Scaffolds
PF11171DUF2958 17.65
PF05497Destabilase 0.98
PF13619KTSC 0.98



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.00 %
UnclassifiedrootN/A50.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001392|Lau_10046248All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium2711Open in IMG/M
3300001679|TahiMoana_1033508All Organisms → Viruses → Predicted Viral1681Open in IMG/M
3300001679|TahiMoana_1052749Not Available1907Open in IMG/M
3300001680|KiloMoana_10033549All Organisms → Viruses → Predicted Viral2290Open in IMG/M
3300001681|Abe_10021632All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium5440Open in IMG/M
3300001681|Abe_10021632All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium5440Open in IMG/M
3300001728|JGI24521J20086_1018440Not Available539Open in IMG/M
3300002484|JGI25129J35166_1080483Not Available588Open in IMG/M
3300002511|JGI25131J35506_1008690All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium1412Open in IMG/M
3300002518|JGI25134J35505_10056097Not Available970Open in IMG/M
3300002519|JGI25130J35507_1031000Not Available1151Open in IMG/M
3300002519|JGI25130J35507_1063487Not Available709Open in IMG/M
3300002760|JGI25136J39404_1016823All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium1318Open in IMG/M
3300002760|JGI25136J39404_1018675Not Available1253Open in IMG/M
3300002760|JGI25136J39404_1039068All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium875Open in IMG/M
3300003690|PicViral_1006459All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium6797Open in IMG/M
3300006164|Ga0075441_10057620All Organisms → Viruses → Predicted Viral1531Open in IMG/M
3300006164|Ga0075441_10159034Not Available850Open in IMG/M
3300006164|Ga0075441_10192325Not Available761Open in IMG/M
3300006164|Ga0075441_10289456Not Available599Open in IMG/M
3300006164|Ga0075441_10293584Not Available594Open in IMG/M
3300006164|Ga0075441_10371450Not Available519Open in IMG/M
3300006165|Ga0075443_10075668All Organisms → Viruses → Predicted Viral1144Open in IMG/M
3300006165|Ga0075443_10143649Not Available839Open in IMG/M
3300006165|Ga0075443_10156737All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium805Open in IMG/M
3300006191|Ga0075447_10159231Not Available755Open in IMG/M
3300006193|Ga0075445_10041227All Organisms → Viruses → Predicted Viral1873Open in IMG/M
3300006352|Ga0075448_10192100Not Available626Open in IMG/M
3300006736|Ga0098033_1031821All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium1595Open in IMG/M
3300006738|Ga0098035_1043862All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium1654Open in IMG/M
3300006738|Ga0098035_1044859Not Available1632Open in IMG/M
3300006738|Ga0098035_1084154Not Available1122Open in IMG/M
3300006750|Ga0098058_1101884Not Available776Open in IMG/M
3300006751|Ga0098040_1113439Not Available812Open in IMG/M
3300006751|Ga0098040_1234191Not Available533Open in IMG/M
3300006753|Ga0098039_1103508Not Available980Open in IMG/M
3300006753|Ga0098039_1328259Not Available509Open in IMG/M
3300006789|Ga0098054_1069180All Organisms → Viruses → Predicted Viral1337Open in IMG/M
3300006900|Ga0066376_10287002Not Available963Open in IMG/M
3300006923|Ga0098053_1028627All Organisms → Viruses → Predicted Viral1188Open in IMG/M
3300006926|Ga0098057_1061542Not Available917Open in IMG/M
3300006927|Ga0098034_1029720Not Available1652Open in IMG/M
3300006947|Ga0075444_10335210Not Available578Open in IMG/M
3300006947|Ga0075444_10402306Not Available514Open in IMG/M
3300008217|Ga0114899_1078471All Organisms → Viruses → Predicted Viral1135Open in IMG/M
3300009030|Ga0114950_11262743Not Available574Open in IMG/M
3300009409|Ga0114993_10188767All Organisms → Viruses → Predicted Viral1597Open in IMG/M
3300009622|Ga0105173_1097275Not Available538Open in IMG/M
3300010151|Ga0098061_1195778Not Available718Open in IMG/M
3300010155|Ga0098047_10124122All Organisms → Viruses → Predicted Viral1004Open in IMG/M
3300010155|Ga0098047_10238356All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium692Open in IMG/M
3300010155|Ga0098047_10299948Not Available607Open in IMG/M
3300013098|Ga0164320_10643020Not Available556Open in IMG/M
3300017703|Ga0181367_1069824Not Available610Open in IMG/M
3300017704|Ga0181371_1007639All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium1877Open in IMG/M
3300017705|Ga0181372_1025317All Organisms → Viruses → Predicted Viral1010Open in IMG/M
3300017705|Ga0181372_1053147Not Available684Open in IMG/M
3300017718|Ga0181375_1044979Not Available737Open in IMG/M
3300025039|Ga0207878_126111Not Available603Open in IMG/M
3300025045|Ga0207901_1003439All Organisms → Viruses → Predicted Viral2491Open in IMG/M
3300025045|Ga0207901_1012723All Organisms → Viruses → Predicted Viral1169Open in IMG/M
3300025045|Ga0207901_1028698Not Available757Open in IMG/M
3300025046|Ga0207902_1008495All Organisms → Viruses → Predicted Viral1077Open in IMG/M
3300025050|Ga0207892_1040861Not Available541Open in IMG/M
3300025066|Ga0208012_1018067All Organisms → Viruses → Predicted Viral1162Open in IMG/M
3300025069|Ga0207887_1003629All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium2392Open in IMG/M
3300025069|Ga0207887_1025217All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium946Open in IMG/M
3300025072|Ga0208920_1005633All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium2926Open in IMG/M
3300025072|Ga0208920_1005633All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium2926Open in IMG/M
3300025082|Ga0208156_1010487All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium2262Open in IMG/M
3300025096|Ga0208011_1005598All Organisms → Viruses → Predicted Viral3749Open in IMG/M
3300025097|Ga0208010_1040527Not Available1060Open in IMG/M
3300025103|Ga0208013_1132518Not Available607Open in IMG/M
3300025112|Ga0209349_1073624All Organisms → Viruses → Predicted Viral1017Open in IMG/M
3300025112|Ga0209349_1153465Not Available618Open in IMG/M
3300025122|Ga0209434_1005615All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium5084Open in IMG/M
3300025122|Ga0209434_1007914All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium4118Open in IMG/M
3300025122|Ga0209434_1028755Not Available1832Open in IMG/M
3300025122|Ga0209434_1062252All Organisms → Viruses → Predicted Viral1127Open in IMG/M
3300025125|Ga0209644_1002744All Organisms → Viruses → Predicted Viral3382Open in IMG/M
3300025125|Ga0209644_1021213All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium1412Open in IMG/M
3300025125|Ga0209644_1034909All Organisms → Viruses → Predicted Viral1127Open in IMG/M
3300025125|Ga0209644_1078668All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium772Open in IMG/M
3300025141|Ga0209756_1255458Not Available640Open in IMG/M
3300025241|Ga0207893_1055342Not Available570Open in IMG/M
3300025267|Ga0208179_1052267Not Available917Open in IMG/M
3300025286|Ga0208315_1155258Not Available508Open in IMG/M
3300025305|Ga0208684_1105648Not Available698Open in IMG/M
3300025873|Ga0209757_10001463All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium5740Open in IMG/M
3300025873|Ga0209757_10043116All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium1312Open in IMG/M
3300025873|Ga0209757_10253262Not Available559Open in IMG/M
3300027668|Ga0209482_1040255All Organisms → Viruses → Predicted Viral1792Open in IMG/M
3300027668|Ga0209482_1157637All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium663Open in IMG/M
3300027686|Ga0209071_1002565All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium6743Open in IMG/M
3300027714|Ga0209815_1051465All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium1493Open in IMG/M
3300027771|Ga0209279_10086372All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium892Open in IMG/M
3300027771|Ga0209279_10087016Not Available888Open in IMG/M
(restricted) 3300028045|Ga0233414_10012150All Organisms → Viruses → Predicted Viral3307Open in IMG/M
3300031606|Ga0302119_10017552All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium3042Open in IMG/M
3300031606|Ga0302119_10063272All Organisms → Viruses → Predicted Viral1530Open in IMG/M
3300031627|Ga0302118_10256756Not Available820Open in IMG/M
3300031801|Ga0310121_10478880Not Available693Open in IMG/M
3300031803|Ga0310120_10262080All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium924Open in IMG/M
3300034654|Ga0326741_085273Not Available519Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine62.50%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine19.23%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean4.81%
Black Smokers Hydrothermal PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume4.81%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.92%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic0.96%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.96%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.96%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater0.96%
Black Smokers Hydrothermal PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Black Smokers Hydrothermal Plume0.96%
Marine, Hydrothermal Vent PlumeEnvironmental → Aquatic → Marine → Hydrothermal Vents → Black Smokers → Marine, Hydrothermal Vent Plume0.96%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.96%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001392ELSC MetagenomeEnvironmentalOpen in IMG/M
3300001679Black smokers hydrothermal plume microbial communities from Tahi Moana, Lau Basin, Pacific OceanEnvironmentalOpen in IMG/M
3300001680Black smokers hydrothermal plume microbial communities from Kilo Moana, Pacific OceanEnvironmentalOpen in IMG/M
3300001681Black smokers hydrothermal plume microbial communities from Abe, Lau Basin, Pacific Ocean - IDBAEnvironmentalOpen in IMG/M
3300001728Marine viral communities from the Pacific Ocean - LP-46EnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002518Marine viral communities from the Pacific Ocean - ETNP_6_100EnvironmentalOpen in IMG/M
3300002519Marine viral communities from the Pacific Ocean - ETNP_2_300EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300003690Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Piccard2013-Plume - Viral/microbial metagenome assemblyEnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006165Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNAEnvironmentalOpen in IMG/M
3300006191Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNAEnvironmentalOpen in IMG/M
3300006193Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNAEnvironmentalOpen in IMG/M
3300006352Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNAEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006900Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_AEnvironmentalOpen in IMG/M
3300006923Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006947Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNAEnvironmentalOpen in IMG/M
3300008217Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215EnvironmentalOpen in IMG/M
3300009030Deep subsurface microbial communities from Kermadec Trench to uncover new lineages of life (NeLLi) - N075 metaGEnvironmentalOpen in IMG/M
3300009409Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300013098Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay11, Core 4567-28, 0-3 cmEnvironmentalOpen in IMG/M
3300017703Marine viral communities from the Subarctic Pacific Ocean - ?Lowphox_02 viral metaGEnvironmentalOpen in IMG/M
3300017704Marine viral communities from the Subarctic Pacific Ocean - Lowphox_07 viral metaGEnvironmentalOpen in IMG/M
3300017705Marine viral communities from the Subarctic Pacific Ocean - Lowphox_08 viral metaGEnvironmentalOpen in IMG/M
3300017718Marine viral communities from the Subarctic Pacific Ocean - Lowphox_11 viral metaGEnvironmentalOpen in IMG/M
3300025039Marine viral communities from the Pacific Ocean - LP-41 (SPAdes)EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025050Marine viral communities from the Pacific Ocean - LP-54 (SPAdes)EnvironmentalOpen in IMG/M
3300025066Marine viral communities from the Subarctic Pacific Ocean - 15B_ETSP_OMZ_AT15312_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025069Marine viral communities from the Pacific Ocean - LP-38 (SPAdes)EnvironmentalOpen in IMG/M
3300025072Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025096Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025241Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025286Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_215 (SPAdes)EnvironmentalOpen in IMG/M
3300025305Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027668Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG104-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027686Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG108-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027714Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027771Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA (SPAdes)EnvironmentalOpen in IMG/M
3300028045 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_10_MGEnvironmentalOpen in IMG/M
3300031606Marine microbial communities from Western Arctic Ocean, Canada - AG5_TmaxEnvironmentalOpen in IMG/M
3300031627Marine microbial communities from Western Arctic Ocean, Canada - AG5_33.1EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031803Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983EnvironmentalOpen in IMG/M
3300034654Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 487_2244EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Lau_1004624823300001392Black Smokers Hydrothermal PlumeMNEFDERLHGEVDKALQYLLDHEMISMEWDPVGEEMVYYMTDKQRAMPNPEDWDTAI*
TahiMoana_103350833300001679Black Smokers Hydrothermal PlumeMNEFDERLHGEVDKALQYLLDHEMISMEWDPDAEEMVYYMTDKQRAMPNPEDWDTAI*
TahiMoana_105274933300001679Black Smokers Hydrothermal PlumeMNEFDERLHGEVDKALQYLLDHEMISMEWDPVGEEMVFFMTEEQKGMSNPEDWDEAL*
KiloMoana_1003354973300001680Black Smokers Hydrothermal PlumeLVNFNMNEFDERLHGEVDKALQYLLDHEMISMEWDPVGEEMVYYMTDKQKGMPNPDDWDEAL*
Abe_10021632143300001681Black Smokers Hydrothermal PlumeLVNFNMNEFDERLHGEVDKALQYLLDHEMISMEWDPVGEEMVYYMTDKQRAMPNPEDWDTAI*
Abe_1002163253300001681Black Smokers Hydrothermal PlumeLVNFNMNEFDERLHGEVDKALQYLLDHEMISMEWDPVGEEMVFFMTEEQKGMSNPEDWDEAL*
JGI24521J20086_101844023300001728MarineTKSLPTWRSIPLVNFNDTPYEDLMKSEVDKALQYLLDHEMISMEWDPVGEEMVYYMTDKQRAMPNPEDWDEAI*
JGI25129J35166_108048313300002484MarineFNDLVKSEVDKALQYLLDHEMISMEWDPDAEEMVFYMTDKQRAMPKPDDWDEKAP*
JGI25131J35506_100869023300002511MarineLVSFNDDNLESEIDQALKYLLDHEMISMEWDPDAEDMVFYMTDKQRAMPLPDDWETAP*
JGI25134J35505_1005609733300002518MarineLVDFNYDPLNDLVKSEVDKALQYLLDHEMVSMEWDPDIEEMVFYMTEAQRA
JGI25130J35507_103100033300002519MarineLVNFNYDPFNDLVKSEVDKALQYLLDHEMISMEWDPDAEEMVFYMTDKQRAMPKPDDWDEKAP*
JGI25130J35507_106348733300002519MarineLVDFNYDPLNDLVRSEVDKALKYLLDREMVSMEWDPDIEEMVFYMTDKQRAMPKPDDWGGEX*
JGI25136J39404_101682323300002760MarineLVNFNDNPFEEMFKQELDKALKYLLDNEMISMSWDPDAEDMVFYMTDAQRAMPLPDDWEEVL*
JGI25136J39404_101867533300002760MarineLVNFNYDPFDDLVKSEVDKALQYLLDHEMISMEWDPDAEEMVFYMTDKQRAMPKPDDWESAP*
JGI25136J39404_103906813300002760MarineMEKMFKQELDKALKYLLDNEMISMSWDPDAEDMVFYMTDAQRAMPLPDDWEDSP*
PicViral_1006459103300003690Marine, Hydrothermal Vent PlumeMEKMFKQELDKALKYLLDHEMISMSWDSDAEDMVFYMTDEQRAMPLPDDWETSP*
Ga0075441_1005762053300006164MarineMNLFTWRSIPLVDFNDTPYEDLMKSEVDKALQYLLDHDMLSMEWDPVGEEMVYYMTEKQRAMPKPEDWDTAM*
Ga0075441_1015903413300006164MarineMNEFEKMLESEVDKALKYLLDHEMISMEWDPAIEDMIFYMTDKQRAMPNPEDWDEAL*
Ga0075441_1019232513300006164MarineQSEIDQALKYLLDHEMISMEWDPVGEEMVYYMTDKQRVMPKPNDWDQF*
Ga0075441_1028945623300006164MarineLVEFNDDNMQSEIDQALKYLLDHEMISMEWDPVGEEMVYYMTDKQRAMPKPEDWDTAM*
Ga0075441_1029358423300006164MarineLVDFNDDYGQSEIDQALKYLLDNEMISMEWDPDKEEMVYYMTDKQRAMPKPEDWDTAM*
Ga0075441_1037145013300006164MarineLADLNDKYGKSEIDQALKYLLDNEMISMEWDPDGEEMIYYMTEKQRDMPKPADWDTAM*
Ga0075443_1007566833300006165MarineLVEFNDDNMKSEVDQALKYLLDHELISMEWDPVGEEMVYYMTDKQRVMPKPNDWDQF*
Ga0075443_1014364933300006165MarineLVNFNDKPFEDMLSSEIDKALKYLLDHEMISMTWDPDAEDMVFYMTDKQRAMPNPEDWDEAI*
Ga0075443_1015673713300006165MarineLVDFNDTPYEDLMKSEVDKALQYLLDHDMLSMEWDPVGEEMVYYMTEKQRAMPKPEDWDTAM*
Ga0075447_1015923143300006191MarineLVEFNDDNMQSEIDQALKYLLDHEMISMEWDPVGEEMVYYMTDKQRAMPKPE
Ga0075445_1004122733300006193MarineLVDFNDDYGQSEIDQALKYLLDNEMISMEWDPDGEEMVYYMTDKQRAMPKPEDWDTAM*
Ga0075448_1019210023300006352MarineLVEFNDDNMQSEIDQALKYLLDHEMISMEWDPVGEEMVYYMTDKQRVMPKPNDWDQF*
Ga0098033_103182123300006736MarineLVDFNYDPLNDLVKSEVDKALQYLLDHEMVSMEWDPDIEEMVFYMTEAQRAMPKPDDWDEKAP*
Ga0098035_104386243300006738MarineLVDFNYDPFDDLVRSEVDKALKYLLDREMVSMEWDPDIEEMVFYMTDKQRAMPKPDEWGGEL*
Ga0098035_104485933300006738MarineLVDFNYDPFDDLVKSEVDKALQYLLDHEMISMEWDPDLEEMVFYMTDKQRAMPKPDDWESAP*
Ga0098035_108415433300006738MarineLVDFNYDPFNDLVKSEVDKALQYLLDHEMISMEWDPDAEEMVFYMTEAQRAMPKPDDWDEKAP*
Ga0098058_110188423300006750MarineLVDFNYDPFDDLVRSEVDKALKYLLDREMVSMEWDPDIEEMVFYMTDKQRAMPKPDDWGGEL*
Ga0098040_111343923300006751MarineLVDFNYDPFDDLVRSEVDKALKYLLDREMVSMEWDPDIEEMVFYMTEAQRAMPKPDDWDEKAP*
Ga0098040_123419113300006751MarineDLVKSEVDKALQYLLDHEMISMEWDPDAEEMVFYMTEAQRAMPKPDDWDEKAP*
Ga0098039_110350813300006753MarineLVNFNYDPFDDLVKSEVDKALQYLLDHEMISMEWDPDLEEMVFYMTEAQRAMPKPDDWDEKAP*
Ga0098039_132825913300006753MarineLVDFNYDPFDDLVRSEVDKALKYLLDREMVSMEWDPDIEEMVFYMTDKQRAMPKPDDWDEKAP*
Ga0098054_106918023300006789MarineLVNFNYDPFDDLVKSEVDKALQYLLDHEMISMEWDPDLEEMVFYMTDKQKAMPKPDDWESAP*
Ga0066376_1028700213300006900MarineLVNFNMSKFDEMEEMFKQELDKALKYLLDHEMISMEWDADAEDMVFYMTDKQRAMPTPDDWEEAI*
Ga0098053_102862713300006923MarineLVDFNYDPLNDLVKSEVDKALQYLLDHEMVSMEWDPDLEEMVFYMTEAQRAMPKPDDWESAP*
Ga0098057_106154223300006926MarineLVNFNDNLFEEMFKKELDKALKYLLDNELISMSWDPDAEDMVFYMTDAQRVMPLPDDWEDSP*
Ga0098034_102972033300006927MarineLVDFNYDPFDDLVKSEVDKALQYLLDHEMISMEWDPDLEEMVFYMTDKQKAMPKPDDWESAP*
Ga0075444_1033521013300006947MarineLVDFNDDYGKSEIDQALKYLLDHEMISMEWDPVGEEMVYYMTDKQRAMPKPEDWDTAM*
Ga0075444_1040230623300006947MarineLVDFNDDYGKSEIDQALKYLLDNEMISMEWDPDGEEMVYYMTDKQRAMPKPEDWDTAM*
Ga0114899_107847123300008217Deep OceanLVNFNDNPFEEMFKQELDKALKYLLDNEMISMSWDPDAEDMVFYMTDAQRAMPLPDDWEDSP*
Ga0114950_1126274323300009030Deep SubsurfaceVDKALQYLLDHEMISMEWDPDREEMVFYMTDKQRAMPNPEDWDEAL*
Ga0114993_1018876723300009409MarineLVDFNDDYGKSEIDQALKYLLDNEMISMEWDPDGEEMVYYMTDKQRAMPKPNDWDTAM*
Ga0105173_109727523300009622Marine OceanicLVDFNDTPYEDLMKSEVDKALQYLLDHEMISMEWDPDAEDMVFYMTDDQKGKPLPDDWEEAI*
Ga0098061_119577813300010151MarineLVDFNYDPLNDLVKSEVDKALQYLLDHEMVSMEWDPDIEEMVFYMTDKQKAMPKPDDWESAP*
Ga0098047_1012412213300010155MarineNFNDNLFEEMFKKELDKALKYLLDNELISMSWDPDAEDMVFYMTDAQRVMPLPDDWEDSP
Ga0098047_1023835623300010155MarineALQYLLDHEMVSMEWDPDIEEMVFYMTDKQRAMPKPDDWGGEP*
Ga0098047_1029994813300010155MarineALQYLLDHEMVSMEWDPDIEEMVFYMTEAQRAMPKPDDWDEKAP*
Ga0164320_1064302013300013098Marine SedimentPYEDLMKSEVDKALQYLLDHDMLSMEWDPVGEEMVYYMTEKQRAMPKPEDWDTAM*
Ga0181367_106982423300017703MarineLNDLVKSEVDKALQYLLDHEMVSMEWDPDIEEMVFYMTEAQRAMPKPDDWDEKAP
Ga0181371_100763933300017704MarineLVNFNYDPFDDLVKSEVDKALQYLLDHEMISMEWDPDLEEMVFYMTDKQRAMPKPDDWESAP
Ga0181372_102531723300017705MarineLVNFNYDPFDDLVKSEVDKALQYLLDHEMISVEWDPDLEEMVFYMTDKQKAMPKPDDWESAP
Ga0181372_105314733300017705MarineLVDFNYDPFDDLVKSEVDKALQYLLDHEMVSMEWDPDLEEMVFYMTEAQRAMPKPDDWESAP
Ga0181375_104497933300017718MarineNLLIWRNTPLVDFNYDPLNDLVKSEVDKALQYLLDHEMVSMEWDPDAEEMVFYMTEAQRAMPKPDDWDEKAP
Ga0207878_12611123300025039MarineLVNFNDTPYEDLMKSEVDKALQYLLDHDMLSMEWDPVGEEMVYYMTDKQRAMPKPEDWDTAM
Ga0207901_100343923300025045MarineMKSEVDKALQYLLDHDMLSMEWDPVGEEMVYYMTDKQRAMPKPEDWDTAM
Ga0207901_101272323300025045MarineLVNFNDTPYEDLMKSEVDKALQYLLDHEMISMEWDPVGEEMVYYMTDKQRAMPNPEDWDEAI
Ga0207901_102869833300025045MarineLVNFNDDNMQSEIDQALKYLLDHEMISMEWDPVGEEMVYYMTDKQRGMPKPADWDQF
Ga0207902_100849543300025046MarineLVNFNNNPFDEMEKMFKQELDKALKYLLDNEMISMSWDPDAEDMVFYMTDEQRMMPLPDDWETSP
Ga0207892_104086113300025050MarineLVDFNMNEFDKMLSSEVDKALKYLLDHEMISMEWDPEIEDMVFYMTDKQRAMPNPEDWDEAL
Ga0208012_101806713300025066MarineLVDFNYDPLNDLVKSEVDKALQYLLDHEMVSMEWDPDLEEMVFYMTEAQRAMPKPDDWESAP
Ga0207887_100362943300025069MarineMNEFDELLSSEVDKALQYLLDHEMISMEWDPDREEMVFYMTDKQRAMPNPEDWDEAL
Ga0207887_102521723300025069MarineMNEFDKRLSSEVDKALQYLLDHEMISMEWDPVGEEMVFYMTDEQRAMPTPEDWDEAI
Ga0208920_100563333300025072MarineLVDFNYDPFDDLVKSEVDKALQYLLDHEMISMEWDPDLEEMVFYMTDKQRAMPKPDDWESAP
Ga0208920_100563383300025072MarineLTWRNTPLVDFNYDPLNDLVKSEVDKALQYLLDHEMVSMEWDPDLEEMVFYMTEAQRAMPKPDDWESAP
Ga0208156_101048743300025082MarineLVDFNYDPLNDLVKSEVDKALQYLLDHEMVSMEWDPDIEEMVFYMTEAQRAMPKPDDWDEKAP
Ga0208011_100559813300025096MarineLVDFNYDPFDDLVKSEVDKALQYLLDHEMISMEWDPDLEEMVFYMTDKQRAMPKPDD
Ga0208010_104052733300025097MarineLVDFNYDPFNDLVKSEVDKALQYLLDHEMISMEWDPDAEEMVFYMTEAQRAMPKPDDWDEKAP
Ga0208013_113251823300025103MarineLVNFNYDPFDDLVKSEVDKALQYLLDHEMISMEWDPDLEEMVFYMTDKQKAMPKPDDWESAP
Ga0209349_107362433300025112MarineLVNFNDNLFEEMFKKELDKALKYLLDNELISMSWDPDAEDMVFYMTDAQRVMPLPDDWEDSP
Ga0209349_115346523300025112MarineDKALQYLLDHEMVSMEWDPDLEEMVFYMTEAQRAMPKPDDWDEKAP
Ga0209434_1005615143300025122MarineLVDFNYDPLNDLVKSEVDKALQYLLDHEMVSMEWDPDLEEMVFYMTEAQRAMPKPDDWDEKAP
Ga0209434_100791473300025122MarineVKSEVDKALQYLLDHEMISMEWDPDAEEMVFYMTDKQRAMPKPDDWDEKAP
Ga0209434_102875513300025122MarineLVDFNYDPLNDLVRSEVDKALKYLLDREMVSMEWDPDIEEMVFYMTDKQRAMPKPDDWGGEP
Ga0209434_106225233300025122MarineLVNFNDNLFEEMFKKELDKALKYLLDNEMISMSWDPDAEDMVFYMTEAQRVMPLPDDWEDSP
Ga0209644_1002744133300025125MarineLVSFNDDNLESEIDQALKYLLDHEMISMEWDPDAEDMVFYMTDKQRAMPLPDDWET
Ga0209644_102121333300025125MarineLVNFNDNPFEEMFKQELDKALKYLLDNEMISMSWDPDAEDMVFYMTDAQRAMPLPDDWEEVL
Ga0209644_103490933300025125MarineLVSFNNNNPFDEMEKMFKQELDKALKYLLDNEMISMSWDPDAEDMVFYMTDAQRAMPLPDDWEDSP
Ga0209644_107866813300025125MarineNSLTWRSIPLVSFNDDNLKSEIDQALKYLLDHEMISMEWDPDAEDMVFYMTDKQRAMPLPDDWETAP
Ga0209756_125545833300025141MarineLVDFNYDPLNDLVKSEVDKALQYLLDHEMVSMEWDPDLEEMVFYMTEAQRAMPKPDDW
Ga0207893_105534223300025241Deep OceanLVDFNDKPFEDMLSNEVDKALQYLLVHEMISMEWDPELEDMVFYMTDKQRAMPNPEDWDEAIYNE
Ga0208179_105226723300025267Deep OceanLVNFNDNPFEEMFKQELDKALKYLLDNEMISMSWDPDAEDMVFYMTDVQRAMPLPDDWEDSP
Ga0208315_115525823300025286Deep OceanNPFEEMFKQELDKALKYLLDNEMISMSWDPDAEDMVFYMTDAQRAMPLPDDWEDSP
Ga0208684_110564813300025305Deep OceanLVNFNDNPFEEMFKQELDKALKYLLDNEMISMSWDPDAEDMVFYMTDAQRAMPLPDDWEDSP
Ga0209757_10001463133300025873MarineLVSFNDDNLKSEIDQALKYLLDHEMISMEWDPDAEDMVFYMTDEQRVKPLPDDWEDSP
Ga0209757_1004311643300025873MarineLVSFNDDNLESEIDQALKYLLDHEMISMEWDPDAEDMVFYMTDKQRAMPLPDDWETAP
Ga0209757_1025326213300025873MarineDDLVKSEVDKALQYLLDHEMISMEWDPDAEEMVFYMTDKQRAMPKPDDWESAP
Ga0209482_104025523300027668MarineLVDFNDDYGKSEIDQALKYLLDNEMISMEWDPDKEEMVYYMTDKQRAMPKPEDWDTAM
Ga0209482_115763713300027668MarineLVDFNDTPYEDLMKSEVDKALQYLLDHDMLSMEWDPVGEEMVYYMTEKQRAMPKPEDWDT
Ga0209071_100256553300027686MarineLVDFNDDYGQSEIDQALKYLLDNEMISMEWDPDKEEMVYYMTDKQRAMPKPEDWDTAM
Ga0209815_105146513300027714MarineMNLFTWRSIPLVDFNDTPYEDLMKSEVDKALQYLLDHDMLSMEWDPVGEEMVYYMTEKQRAMPKPEDWDTAM
Ga0209279_1008637213300027771MarineLVDFNDTPYEDLMKSEVDKALQYLLDHDMLSMEWDPVGEEMVYYMTEKQRAMPKPEDWDTAM
Ga0209279_1008701613300027771MarineLVNFNDKPFEDMLSSEIDKALKYLLDHEMISMTWDPDAEDMVFYMTDKQRAMPNPEDWDEAI
(restricted) Ga0233414_1001215033300028045SeawaterMQSEIDQALKYLLDHEMISMEWDPVGEEMVYYMTDKQRAMPKPNDWDQF
Ga0302119_1001755253300031606MarineLVDFNDDYGKSEIDQALKYLLDNEMISMEWDPDGEEMVYYMTDKQRAMPKPEDWDTAM
Ga0302119_1006327223300031606MarineLVDFNEDNMKSEIDQALKYLLDHEMISMEWDPVGEEMVYYMTAKQRGMPKPADWDTAM
Ga0302118_1025675613300031627MarineLVEFNDDNMKSEIDQALKYLLDNEMISMEWDPDGEEMVYYMTDKQRAMPKPNDWDTAM
Ga0310121_1047888043300031801MarineMNEFDGMLSSEVDKALKYLLDHEMISMEWDPELEDMVFYMTDKQRAMPNPEDWDEAL
Ga0310120_1026208023300031803MarineLVDFNNNPFDEMEKMFKQELDKALKYLLDNEMISMSWDSDAEDMVFYMTDKQRGMPLPDDWDEAI
Ga0326741_085273_29_2173300034654Filtered SeawaterLVNFNDKPFEDMLSSEIDKALKYLLDHEMISMSWDPDAEDMVFYMTDKQRGMPLPDDWEDSP


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.