NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F098052

Metagenome / Metatranscriptome Family F098052

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F098052
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 57 residues
Representative Sequence MGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLNNK
Number of Associated Samples 72
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 3.85 %
% of genes near scaffold ends (potentially truncated) 16.35 %
% of genes from short scaffolds (< 2000 bps) 60.58 %
Associated GOLD sequencing projects 63
AlphaFold2 3D model prediction Yes
3D model pTM-score0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (50.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(27.885 % of family members)
Environment Ontology (ENVO) Unclassified
(73.077 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(94.231 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.94%    β-sheet: 35.29%    Coil/Unstructured: 51.76%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF13578Methyltransf_24 4.81
PF01909NTP_transf_2 3.85
PF08241Methyltransf_11 2.88
PF02142MGS 2.88
PF06067DUF932 2.88
PF08545ACP_syn_III 2.88
PF00118Cpn60_TCP1 0.96
PF01541GIY-YIG 0.96
PF03382DUF285 0.96
PF01041DegT_DnrJ_EryC1 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0399dTDP-4-amino-4,6-dideoxygalactose transaminaseCell wall/membrane/envelope biogenesis [M] 0.96
COG0436Aspartate/methionine/tyrosine aminotransferaseAmino acid transport and metabolism [E] 0.96
COG0459Chaperonin GroEL (HSP60 family)Posttranslational modification, protein turnover, chaperones [O] 0.96
COG0520Selenocysteine lyase/Cysteine desulfuraseAmino acid transport and metabolism [E] 0.96
COG0626Cystathionine beta-lyase/cystathionine gamma-synthaseAmino acid transport and metabolism [E] 0.96
COG1104Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS familyAmino acid transport and metabolism [E] 0.96
COG2873O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependentAmino acid transport and metabolism [E] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms50.00 %
UnclassifiedrootN/A50.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10019662All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3980Open in IMG/M
3300000101|DelMOSum2010_c10041791All Organisms → Viruses → Predicted Viral2384Open in IMG/M
3300000101|DelMOSum2010_c10089142All Organisms → Viruses → Predicted Viral1328Open in IMG/M
3300000928|OpTDRAFT_10081416Not Available771Open in IMG/M
3300000929|NpDRAFT_10007369All Organisms → Viruses → Predicted Viral2676Open in IMG/M
3300000929|NpDRAFT_10028895All Organisms → Viruses → Predicted Viral2155Open in IMG/M
3300001346|JGI20151J14362_10008607Not Available6238Open in IMG/M
3300001348|JGI20154J14316_10008178Not Available7197Open in IMG/M
3300001348|JGI20154J14316_10055635All Organisms → Viruses → Predicted Viral1619Open in IMG/M
3300001348|JGI20154J14316_10059160All Organisms → Viruses → Predicted Viral1530Open in IMG/M
3300001348|JGI20154J14316_10155932Not Available610Open in IMG/M
3300001349|JGI20160J14292_10007097Not Available7774Open in IMG/M
3300001352|JGI20157J14317_10025478Not Available3245Open in IMG/M
3300001472|JGI24004J15324_10095851Not Available772Open in IMG/M
3300001589|JGI24005J15628_10012182All Organisms → Viruses → Predicted Viral3920Open in IMG/M
3300001589|JGI24005J15628_10044102All Organisms → Viruses → Predicted Viral1773Open in IMG/M
3300001589|JGI24005J15628_10058690Not Available1446Open in IMG/M
3300002153|JGI24540J26637_10003420All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes7122Open in IMG/M
3300002153|JGI24540J26637_10041169All Organisms → Viruses → Predicted Viral1602Open in IMG/M
3300002186|JGI24539J26755_10002900All Organisms → cellular organisms → Bacteria7697Open in IMG/M
3300005837|Ga0078893_10502234All Organisms → Viruses → Predicted Viral1596Open in IMG/M
3300006164|Ga0075441_10240638Not Available668Open in IMG/M
3300006190|Ga0075446_10079338Not Available981Open in IMG/M
3300006793|Ga0098055_1028777All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium2314Open in IMG/M
3300006990|Ga0098046_1014583All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Roseivirgaceae → Roseivirga → Roseivirga spongicola2072Open in IMG/M
3300007862|Ga0105737_1003335All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3517Open in IMG/M
3300007862|Ga0105737_1004289All Organisms → cellular organisms → Bacteria3111Open in IMG/M
3300007954|Ga0105739_1145100Not Available561Open in IMG/M
3300008221|Ga0114916_1025661All Organisms → Viruses → Predicted Viral1908Open in IMG/M
3300008470|Ga0115371_10012281All Organisms → Viruses → Predicted Viral1393Open in IMG/M
3300008470|Ga0115371_10867198Not Available620Open in IMG/M
3300008470|Ga0115371_10871045Not Available551Open in IMG/M
3300008470|Ga0115371_10999180Not Available1050Open in IMG/M
3300009074|Ga0115549_1293993Not Available513Open in IMG/M
3300009423|Ga0115548_1185977Not Available646Open in IMG/M
3300009428|Ga0114915_1001422All Organisms → cellular organisms → Bacteria10354Open in IMG/M
3300009432|Ga0115005_10080518All Organisms → Viruses → Predicted Viral2495Open in IMG/M
3300009432|Ga0115005_10525537Not Available944Open in IMG/M
3300009435|Ga0115546_1050405All Organisms → Viruses → Predicted Viral1608Open in IMG/M
3300009435|Ga0115546_1162003Not Available785Open in IMG/M
3300009436|Ga0115008_10538020Not Available837Open in IMG/M
3300009437|Ga0115556_1086926Not Available1210Open in IMG/M
3300009441|Ga0115007_10780775Not Available645Open in IMG/M
3300009445|Ga0115553_1406441Not Available517Open in IMG/M
3300009599|Ga0115103_1640433All Organisms → Viruses → Predicted Viral1812Open in IMG/M
3300009785|Ga0115001_10302381Not Available1014Open in IMG/M
3300009785|Ga0115001_10646242Not Available644Open in IMG/M
3300011258|Ga0151677_1001541Not Available538Open in IMG/M
3300011261|Ga0151661_1004485All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes6909Open in IMG/M
3300017706|Ga0181377_1080032Not Available583Open in IMG/M
3300017706|Ga0181377_1093935Not Available522Open in IMG/M
3300017709|Ga0181387_1000070Not Available20789Open in IMG/M
3300017714|Ga0181412_1003373Not Available5568Open in IMG/M
3300017727|Ga0181401_1035806All Organisms → Viruses → Predicted Viral1407Open in IMG/M
3300017749|Ga0181392_1004355All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes4940Open in IMG/M
3300017770|Ga0187217_1014350All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2879Open in IMG/M
3300019214|Ga0180037_1174451Not Available1278Open in IMG/M
3300020165|Ga0206125_10021296All Organisms → Viruses → Predicted Viral3860Open in IMG/M
3300020165|Ga0206125_10057894All Organisms → Viruses → Predicted Viral1830Open in IMG/M
3300020165|Ga0206125_10333998Not Available561Open in IMG/M
3300020182|Ga0206129_10052554Not Available2532Open in IMG/M
3300020185|Ga0206131_10043786All Organisms → Viruses → Predicted Viral3116Open in IMG/M
3300020187|Ga0206130_10113102All Organisms → Viruses → Predicted Viral1544Open in IMG/M
3300020358|Ga0211689_1148370Not Available651Open in IMG/M
3300020372|Ga0211683_10052097All Organisms → Viruses → Predicted Viral1347Open in IMG/M
3300020382|Ga0211686_10015044Not Available3262Open in IMG/M
3300020382|Ga0211686_10197819Not Available829Open in IMG/M
3300020438|Ga0211576_10154001All Organisms → Viruses → Predicted Viral1243Open in IMG/M
3300021957|Ga0222717_10449955Not Available703Open in IMG/M
3300022053|Ga0212030_1001391All Organisms → Viruses → Predicted Viral2190Open in IMG/M
3300023704|Ga0228684_1055130Not Available618Open in IMG/M
3300024346|Ga0244775_11042964Not Available644Open in IMG/M
3300024348|Ga0244776_10298764Not Available1101Open in IMG/M
3300025108|Ga0208793_1124079Not Available703Open in IMG/M
3300025120|Ga0209535_1047613All Organisms → cellular organisms → Bacteria1854Open in IMG/M
3300025138|Ga0209634_1000453Not Available32075Open in IMG/M
3300025138|Ga0209634_1000714Not Available25337Open in IMG/M
3300025138|Ga0209634_1021031All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3636Open in IMG/M
3300025138|Ga0209634_1123600All Organisms → Viruses → Predicted Viral1100Open in IMG/M
3300025138|Ga0209634_1245604Not Available651Open in IMG/M
3300025276|Ga0208814_1008591Not Available3772Open in IMG/M
3300025276|Ga0208814_1019769All Organisms → Viruses → Predicted Viral2260Open in IMG/M
3300025276|Ga0208814_1026037All Organisms → Viruses → Predicted Viral1901Open in IMG/M
3300025696|Ga0209532_1037479All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → unclassified Flavobacteriaceae → Flavobacteriaceae bacterium2079Open in IMG/M
3300025696|Ga0209532_1150016Not Available722Open in IMG/M
3300025874|Ga0209533_1044147All Organisms → Viruses → Predicted Viral2701Open in IMG/M
3300025876|Ga0209223_10330581Not Available678Open in IMG/M
3300025886|Ga0209632_10001499Not Available23549Open in IMG/M
3300025890|Ga0209631_10234190Not Available924Open in IMG/M
3300026434|Ga0247591_1007479All Organisms → Viruses → Predicted Viral1719Open in IMG/M
3300027280|Ga0208972_1008273Not Available3003Open in IMG/M
3300027413|Ga0208950_1003253All Organisms → cellular organisms → Bacteria6459Open in IMG/M
3300027413|Ga0208950_1026452All Organisms → Viruses → Predicted Viral1619Open in IMG/M
3300027413|Ga0208950_1027789All Organisms → Viruses → Predicted Viral1563Open in IMG/M
3300027506|Ga0208973_1018581All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2143Open in IMG/M
3300027506|Ga0208973_1114253All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300027791|Ga0209830_10175540Not Available1012Open in IMG/M
3300027833|Ga0209092_10024815All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3946Open in IMG/M
3300027833|Ga0209092_10393134Not Available728Open in IMG/M
3300027849|Ga0209712_10104133All Organisms → Viruses → Predicted Viral1636Open in IMG/M
3300027849|Ga0209712_10116905All Organisms → Viruses → Predicted Viral1532Open in IMG/M
3300028125|Ga0256368_1000014All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes10077Open in IMG/M
3300029632|Ga0135266_104330Not Available885Open in IMG/M
3300031602|Ga0307993_1004572All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes3964Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine27.88%
Pelagic MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine12.50%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine7.69%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine5.77%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine5.77%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater5.77%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean4.81%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater4.81%
SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment3.85%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water2.88%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine2.88%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine2.88%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.92%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine1.92%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.96%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.96%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous0.96%
Marine Surface WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water0.96%
Sea-Ice BrineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine0.96%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.96%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine0.96%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.96%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000928Marine plume microbial communities from the Columbia River - 25 PSUEnvironmentalOpen in IMG/M
3300000929Marine plume microbial communities from the Columbia River - 15 PSUEnvironmentalOpen in IMG/M
3300001346Pelagic Microbial community sample from North Sea - COGITO 998_met_01EnvironmentalOpen in IMG/M
3300001348Pelagic Microbial community sample from North Sea - COGITO 998_met_04EnvironmentalOpen in IMG/M
3300001349Pelagic Microbial community sample from North Sea - COGITO 998_met_10EnvironmentalOpen in IMG/M
3300001352Pelagic Microbial community sample from North Sea - COGITO 998_met_07EnvironmentalOpen in IMG/M
3300001472Marine viral communities from the Pacific Ocean - LP-32EnvironmentalOpen in IMG/M
3300001589Marine viral communities from the Pacific Ocean - LP-40EnvironmentalOpen in IMG/M
3300002153Marine eukaryotic phytoplankton communities from the Norwegian Sea - 20m ARK-7M MetagenomeEnvironmentalOpen in IMG/M
3300002186Marine eukaryotic phytoplankton communities from the Norwegian Sea - 10m ARK-5M MetagenomeEnvironmentalOpen in IMG/M
3300005837Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18EnvironmentalOpen in IMG/M
3300006164Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG002-DNAEnvironmentalOpen in IMG/M
3300006190Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNAEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007862Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373A_0.2umEnvironmentalOpen in IMG/M
3300007954Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2umEnvironmentalOpen in IMG/M
3300008221Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66EnvironmentalOpen in IMG/M
3300008470Sediment core microbial communities from Adelie Basin, Antarctica. Combined Assembly of Gp0136540, Gp0136562, Gp0136563EnvironmentalOpen in IMG/M
3300009074Pelagic marine microbial communities from North Sea - COGITO_mtgs_100430EnvironmentalOpen in IMG/M
3300009423Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423EnvironmentalOpen in IMG/M
3300009428Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55EnvironmentalOpen in IMG/M
3300009432Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M MetagenomeEnvironmentalOpen in IMG/M
3300009435Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413EnvironmentalOpen in IMG/M
3300009436Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M MetagenomeEnvironmentalOpen in IMG/M
3300009437Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414EnvironmentalOpen in IMG/M
3300009441Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M MetagenomeEnvironmentalOpen in IMG/M
3300009445Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331EnvironmentalOpen in IMG/M
3300009599Marine eukaryotic communities from Pacific Ocean to study complex ecological interactions - MBTS_5May14_M1_3um Metatranscriptome (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009785Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130EnvironmentalOpen in IMG/M
3300011258Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_1, permeateEnvironmentalOpen in IMG/M
3300011261Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_4, 0.02EnvironmentalOpen in IMG/M
3300017706Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaGEnvironmentalOpen in IMG/M
3300017709Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 10 SPOT_SRF_2010-04-27EnvironmentalOpen in IMG/M
3300017714Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15EnvironmentalOpen in IMG/M
3300017727Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300019214Estuarine microbial communities from the Columbia River estuary - R.1189 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020165Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160331_1EnvironmentalOpen in IMG/M
3300020182Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160502_2EnvironmentalOpen in IMG/M
3300020185Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160517_1EnvironmentalOpen in IMG/M
3300020187Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160512_1EnvironmentalOpen in IMG/M
3300020358Marine microbial communities from Tara Oceans - TARA_B100000768 (ERX555925-ERR599009)EnvironmentalOpen in IMG/M
3300020372Marine microbial communities from Tara Oceans - TARA_B100000787 (ERX556133-ERR599090)EnvironmentalOpen in IMG/M
3300020382Marine microbial communities from Tara Oceans - TARA_B100000780 (ERX556058-ERR599059)EnvironmentalOpen in IMG/M
3300020438Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)EnvironmentalOpen in IMG/M
3300021957Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300023704Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 35R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300025108Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025120Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)EnvironmentalOpen in IMG/M
3300025138Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)EnvironmentalOpen in IMG/M
3300025276Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)EnvironmentalOpen in IMG/M
3300025696Pelagic Microbial community sample from North Sea - COGITO 998_met_02 (SPAdes)EnvironmentalOpen in IMG/M
3300025874Pelagic Microbial community sample from North Sea - COGITO 998_met_04 (SPAdes)EnvironmentalOpen in IMG/M
3300025876Pelagic Microbial community sample from North Sea - COGITO 998_met_06 (SPAdes)EnvironmentalOpen in IMG/M
3300025886Pelagic Microbial community sample from North Sea - COGITO 998_met_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025890Pelagic Microbial community sample from North Sea - COGITO 998_met_08 (SPAdes)EnvironmentalOpen in IMG/M
3300026434Metatranscriptome of seawater microbial communities from Monterey Bay, California, United States - 53R (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300027280Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_48_BLW_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027413Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_54_BLW_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027506Ammonia-oxidizing marine microbial communities from Monterey Bay, California, USA - CAN11_66_BLW_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027791Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)EnvironmentalOpen in IMG/M
3300027833Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027849Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean - Greenland ARC118M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300028125Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SBEnvironmentalOpen in IMG/M
3300029632Marine harbor viral communities from the Pacific Ocean - SMB3EnvironmentalOpen in IMG/M
3300031602Marine microbial communities from Ellis Fjord, Antarctic Ocean - #260EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1001966253300000101MarineMGKSAGTFRFKYTELLGKTEIENTLVIETNDVVHSIGRFGESRQLIDLNVKQLNNKSHE*
DelMOSum2010_1004179133300000101MarineMGKQNGIYRFKYTELKNNTEITNEMVIETKDLVRSIGRFGTSRQLIDLNVKQLNKQYGP*
DelMOSum2010_1008914223300000101MarineMGKQNGTYKFEYTELKNNTEITNEMVIETKDLVRSIGRFGESRQLIYLKVKQLNK*
OpTDRAFT_1008141623300000928Freshwater And MarineMSKNSGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRQLIALNVKQLNFNSINNKK*
NpDRAFT_1000736943300000929Freshwater And MarineMGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLNNK*
NpDRAFT_1002889593300000929Freshwater And MarineYMGKQNGIYKFKYTELKNNTEITNEMVIETKDLIRSIGRFGESRQLINLKVKQLN
JGI20151J14362_1000860783300001346Pelagic MarineMSKKAGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRQLIALNVKQLKH*
JGI20154J14316_10008178223300001348Pelagic MarineMGKQNGIYRFKYTELKNNTEITNEMVIETKDLVRSIGRFGTSRQLIDLNVKQLNK*
JGI20154J14316_1005563543300001348Pelagic MarineMGKSEGVFQFKYTELIDKNEVTNTLVIETKDVVRSIGRFGESRNLVDLSVKQLGIKYNK*
JGI20154J14316_1005916063300001348Pelagic MarineMGKLSGRFQFKYTELVNDDIEKKGELVIETKDIVRSIGRFGESRQLVDLNVRQLNNKAI*
JGI20154J14316_1015593233300001348Pelagic MarineMNKSAGTFRFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRQLIDLNVKQLNNKSHE*
JGI20160J14292_1000709733300001349Pelagic MarineMDKVKGIFRFKYTELVNNNEITNEMVIETKDVVRSIGRFGTSRQLTDLEVKQLNKY*
JGI20157J14317_10025478123300001352Pelagic MarineMSKATNKFKFDYTELKDNVEVTNTLIIETKDIVRSIGKFGESRQLVKLDVKKLNK*
JGI24004J15324_1009585113300001472MarineELINNNERQSELVIETKDVVRSIGKFGATRXXTDLXVKQLNNK*
JGI24005J15628_1001218243300001589MarineMSKKAGVFRFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRQLIDLNVKQLNNRSHE*
JGI24005J15628_1004410263300001589MarineMDKSAGTFRFKYTELLGKTEIENTLVIETXDVVRSIGRFGESRQLIDLNVKQLNNKSHE*
JGI24005J15628_1005869023300001589MarineMEKQNGIYKFKYTELKNNTEIESELIIDTKDLVRSIGRFGEGRQLVTLDVKQINTIKR*
JGI24540J26637_1000342033300002153MarineMEKQNGIYRFKYTELINNNERESELVIETKDVVRSIGKFGETRQLTDLNVKQLNKR*
JGI24540J26637_1004116933300002153MarineMEKQNGIYKFKYTELKNNTEXTXEMVIETKDVVRSIGRFGESRQLINLKVKQLNK*
JGI24539J26755_1000290043300002186MarineMEKQNGIYKFKYTELKNNTEITNEMVIETKDVVRSIGRFGESRQLINLKVKQLNK*
Ga0078893_1050223433300005837Marine Surface WaterMGKHGGIFRFKYTELLSNGEEQEGSLIIETKDVVRSIGRFGESRQLIDLDVKQLNNK*
Ga0075441_1024063823300006164MarineMGKTEGIFRFKYTELKNKTEITSELVIETKDVVRSIGKFGAGRQLVDLDVKQLNNR*
Ga0075446_1007933833300006190MarineMEKQNGIYKFKYTELKNNTEIESELTIDTKDVVRSIGKFGEGRQLVTLDVKQINTIKR*
Ga0098055_102877783300006793MarineMGNNKSGVFKFKYTELVDKNEITSTLVIETKDVVRSIGRFGESRNLVDLSVKQLNNN*
Ga0098046_101458313300006990MarineNNMGNNKSGVFKFKYTELVDKNEITSTLVIETKDVVRSIGRFGESRNLVDLSVKQLNNN*
Ga0105737_100333523300007862Estuary WaterMGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLGIKYNK
Ga0105737_100428913300007862Estuary WaterRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLNNK*
Ga0105739_114510023300007954Estuary WaterMGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLNNKNIR
Ga0114916_102566123300008221Deep OceanMDKKADVFQFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRKLTNLNVKQLNNRSHE*
Ga0115371_1001228113300008470SedimentNNNMDNKADVFRFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRKLTNLNVKQLNNRSHE*
Ga0115371_1086719813300008470SedimentMELQSGIYKFKYTELKNNIELESELTIDTKDVVRSIGKFGEGRQLVNLSVKKINKLKRYKL*
Ga0115371_1087104523300008470SedimentMSEIKGTFRFKYTELKNKTELTSEIIVETMDVVKSIGKFGMGRTLTDLDVIKLNK*
Ga0115371_1099918043300008470SedimentMDKQTGVFEFKYTELIDKHEITNKLVIETKDVVHSILRFGESRKLIDLHIKQLNNTNN*
Ga0115549_129399323300009074Pelagic MarineMGNNRSGVFKFKYTELVDKNEITSTLVIETKDVVRSIGRFGESRNLVDLSVKQLNNKSI*
Ga0115548_118597723300009423Pelagic MarineVFKFKYTELVDKNEITSTLVIETKDVVRSIGRFGESRTLVDLNVKQLNNKNNR*
Ga0114915_1001422133300009428Deep OceanMSKNNKTNPQVYSGIFRFKYTELKNKTEIISELVIETKDVVRSIGRFGESRKLVKLDVKQLNNKNYE*
Ga0115005_1008051833300009432MarineMEKQNGIYKFKYTELKNNTVIESELTIDTKDVVRSIGKFGEGRQLVTLDVKQINTIKR*
Ga0115005_1052553713300009432MarineNNMGKTEGTFRFKYTELKNKTEITSELVIETKDVVKSIGKFGAGRQLVNLDVKQLNKQ*
Ga0115546_105040573300009435Pelagic MarineMSKKAGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRNLVDLSVKQLNNKSI*
Ga0115546_116200323300009435Pelagic MarineMSKKAGTFRFKYTELSGKTEIENTGVIETKDVVRSIGRFGESRQLIALNVKQLKH*
Ga0115008_1053802033300009436MarineMEKQNGIYRFKYTELKNNTEITNEMVIETKDLVRSIGRFGTSRQLTDLEVKQLNKY*
Ga0115556_108692613300009437Pelagic MarineGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRNLVDLSVKQLNNKSI*
Ga0115007_1078077523300009441MarineMGKTEGTFRFKYTELKNKTEITSELVIETKDVVKSIGKFGAGRQLVNLDVKQLNKQ*
Ga0115553_140644123300009445Pelagic MarineMSKKAGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRNLVDLSVKQLNNKNNF*
Ga0115103_164043333300009599MarineMSKSAGTFRFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRVLTNLNVKQLNSKSQY*
Ga0115001_1030238123300009785MarineMGKTEGTFRFKYTELKNNTEITNEMVIETKDVVRSIGRFGTSRQLINLKVKQLNK*
Ga0115001_1064624223300009785MarineMNKSAGTFRFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRQLIDLNVKQLNRSN*
Ga0151677_100154123300011258MarineMGKSEGIFQFKYTELVDKNEVTNTLVIETKDVVRSIGRFGESRHLVDLSVKQLNNN*
Ga0151661_1004485163300011261MarineMGKSEGIFQFKYTELVDKNEVTNTLVIETKDVVRSIGRFGESRNLVDLSVKQLNNKKQFKQ*
Ga0181377_108003233300017706MarineMNKLSGRFQFKYTELVNDDVERRGELVIETKDIVRSIGRFGESRNLVDLNVRQLNNK
Ga0181377_109393513300017706MarineMNKKAGVFKFKYTELVDKNEITSTLVIETKDVVRSIGRFGESRNLVDLSVKQLNNK
Ga0181387_1000070223300017709SeawaterMGKNGGIFRFKYTELLSNGVEQEGSLIIETKDVVRSIGRFGESRQLIDLDVKQLNNK
Ga0181412_1003373133300017714SeawaterMGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRILTDLNVKQLNNKNNRAI
Ga0181401_103580643300017727SeawaterMGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRNLVDLNVKQLGIKYNK
Ga0181392_100435533300017749SeawaterMGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLNNKNNR
Ga0187217_101435033300017770SeawaterMGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLNNKNNKAI
Ga0180037_117445133300019214EstuarineMSKNSGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRQLIALNVKQLNFNSINNNK
Ga0206125_1002129633300020165SeawaterMGSKRAGVFKFKYTELIDKHEITNTLVIETKDVVRSIGRFGESRTLVDLNVKQLNNKNNF
Ga0206125_1005789423300020165SeawaterMSKKAGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRQLTDLNVKQLNNKNNR
Ga0206125_1033399813300020165SeawaterGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRQLIALNVKQLKH
Ga0206129_1005255413300020182SeawaterKYTELIDKNEVTNTLVIETKDVVRSIGRFGESRNLVDLSVKQLGIKYNK
Ga0206131_1004378673300020185SeawaterMGKSEGVFQFKYTELIDKNEVTNTLVIETKDVVRSIGRFGESRNLVDLSVKQLGIKYNK
Ga0206130_1011310233300020187SeawaterMGKQNGIYRFKYTELKNNTEITNEMVIETKDLVRSIGRFGTSRQLIDLNVKQLNK
Ga0211689_114837013300020358MarineQFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRKLTNLNVKQLNNRSHE
Ga0211683_1005209723300020372MarineMGKTEGIFRFKYTELKNKTEITSELVIETKDVVRSIGKFGAGRQLVDLDVKQLNNR
Ga0211686_1001504423300020382MarineMSKNNKTNPQVYSGIFRFKYTELKNKTEIISELVIETKDVVRSIGRFGESRKLVKLDVKQLNNKNYE
Ga0211686_1019781913300020382MarineMSEIKGTFRFKYTELKNKTELTSEIIVETMDVVKSIGKFGMGRTLTDLDVIKLNK
Ga0211576_1015400123300020438MarineMGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLNNKNNRAI
Ga0222717_1044995523300021957Estuarine WaterMSKSAGTFRFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRVLTNLNVKQLNSKSQY
Ga0212030_100139173300022053AqueousMGKQNGIYRFKYTELKNNTEITNEMVIETKDLVRSIGRFGTSRQLIDLNVKQLNKQ
Ga0228684_105513013300023704SeawaterMSKTAGVFKFDYVELKDKQEISSSLVIETKDVVRSIGKFGESRKLVKLYVKELNSKL
Ga0244775_1104296423300024346EstuarineMGKSEGVFEFKYTEIINKNEITNTLVIETKDVVRSIGRFGESRQLIALNVKQLNFNSINNNK
Ga0244776_1029876413300024348EstuarineMGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGKFGESRQLIALNVKQLNKK
Ga0208793_112407913300025108MarineMGNNKSGVFKFKYTELVDKNEITSTLVIETKDVVRSIGRFGESRNLVDLSVKQLNNN
Ga0209535_104761333300025120MarineMGNKRAGVFKFKYTELVDKNEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLNNK
Ga0209634_1000453323300025138MarineMGNKRAGVFKFKYTELINKNEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLGIKYNK
Ga0209634_100071443300025138MarineMEKQNGIYKFKYTELKNNTEIESELIIDTKDLVRSIGRFGEGRQLVTLDVKQINTIKR
Ga0209634_102103133300025138MarineMSKKAGVFRFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRQLIDLNVKQLNNRSHE
Ga0209634_112360023300025138MarineMDKSAGTFRFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRQLIDLNVKQLNNKSHE
Ga0209634_124560423300025138MarineMDKSAGTFRFKYTELLGKTEIENTLVIETKDVIRSIGRFGESRQLIDLNVKQLNSKSHE
Ga0208814_100859163300025276Deep OceanPMEKQNGIYKFKYTELINNNERESELVIETKDVVRSIGKFGETRQLTDLKVKQLN
Ga0208814_101976963300025276Deep OceanMDKKADVFQFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRKLTNLNVKQLNNRSHE
Ga0208814_102603733300025276Deep OceanMEKQNGIYKFKYTELINNNERESELVIETKDVVRSIGKFGEARQLTDLKVKQLNKQ
Ga0209532_103747923300025696Pelagic MarineMGNNRSGVFKFKYTELVDKNEITSTLVIETKDVVRSIGRFGESRNLVDLSVKQLNNKSI
Ga0209532_115001633300025696Pelagic MarineMNKSAGTFRFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRQLIDLNVKQLNNKSHE
Ga0209533_104414793300025874Pelagic MarineMGKLSGRFQFKYTELVNDDIEKKGELVIETKDIVRSIGRFGESRQLVDLNVRQLNNKAI
Ga0209223_1033058123300025876Pelagic MarineMSKKAGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRQLIALNVKQLKH
Ga0209632_1000149983300025886Pelagic MarineMDKVKGIFRFKYTELVNNNEITNEMVIETKDVVRSIGRFGTSRQLTDLEVKQLNKY
Ga0209631_1023419023300025890Pelagic MarineMGSKRAGVFKFKYTELIDKHEITNTLVIETKDVVRSIGRFGESRQLTDLNVKQLNNKNNR
Ga0247591_100747923300026434SeawaterMSKTAGVFKFDYVELKDKKEISSSLVIETKDVVRSIGKFGESRKLVKLYVKELNSKL
Ga0208972_100827383300027280MarineMDKNSGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRVLTDLNVKQLNNKAI
Ga0208950_1003253153300027413MarineMGKQNGIYRFEYTELKNNTEVTNELVIETKDLIRSIGRFGESRQLIHLSVKQLNNK
Ga0208950_102645223300027413MarineMGKLSGRFQFKYTELVNDDVEKKGELVIETKDIVRSIGRFGESRQLVDLNVRQLNNK
Ga0208950_102778923300027413MarineMGKSEGVFEFKYTEIINKNEITNTLVIETRDVVRSIGRFGESRNLVDLNVKQLGIKYNK
Ga0208973_101858183300027506MarineMDKNSGTFRFKYTELSGKTEIENTLVIETKDVVRSIGRFGESRILTDLNVKQLNNKAI
Ga0208973_111425323300027506MarineMGKQNGIYRFKYTELKNNTEITNEMVIETKDLVRSIGRFGESRQLIHLSVKQLNNK
Ga0209830_1017554023300027791MarineMGKTEGTFRFKYTELKNNTEITNEMVIETKDVVRSIGRFGTSRQLINLKVKQLNK
Ga0209092_1002481543300027833MarineMGKSAGTFRFKYTELLGKTEIENTLVIETNDVVHSIGRFGESRQLIDLNVKQLNNKSHE
Ga0209092_1039313413300027833MarineKGIFRFKYTELVNNNEITNEMVIETKDVVRSIGRFGTSRQLTDLEVKQLNKY
Ga0209712_1010413323300027849MarineMGKTEGTFRFKYTELKNKTEITSELVIETKDVVKSIGKFGAGRQLVNLDVKQLNKQ
Ga0209712_1011690553300027849MarineMEKQNGIYKFKYTELKNNTEIESELTIDTKDVVRSIGKFGEGRQLVILDVK
Ga0256368_1000014393300028125Sea-Ice BrineMDKSAGTFRFKYTELLGKTEIENTLVIETKDVVRSIGRFGESRQLIDLNVKQLNRSN
Ga0135266_10433023300029632Marine HarborMDKVGGIFRFKYTELKNNTEITNEMVIETKDVVRSIGRFGTSRQLTDLDVKQLNKQYGP
Ga0307993_1004572113300031602MarineMEKQNGIYKFKYTELKNNTEIESELTIDTKDVVRSIGKFGEGRQLVTLDVKQINTIKR


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