Basic Information | |
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Family ID | F097990 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 104 |
Average Sequence Length | 59 residues |
Representative Sequence | IRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEETFPRSLS |
Number of Associated Samples | 74 |
Number of Associated Scaffolds | 104 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 0.00 % |
% of genes near scaffold ends (potentially truncated) | 4.81 % |
% of genes from short scaffolds (< 2000 bps) | 4.81 % |
Associated GOLD sequencing projects | 66 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.46 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (95.192 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (49.038 % of family members) |
Environment Ontology (ENVO) | Unclassified (41.346 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (49.038 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74 |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 34.09% β-sheet: 0.00% Coil/Unstructured: 65.91% |
Feature Viewer | |||||
Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.46 |
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Visualization |
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All Organisms Unclassified |
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Visualization |
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Freshwater Sediment Watersheds Vadose Zone Soil Grasslands Soil Surface Soil Agricultural Soil Soil Grasslands Soil Soil Hardwood Forest Soil Tropical Peatland Soil Forest Soil Soil |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI12032J12867_10068403 | 3300000912 | Forest Soil | IRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEETFPRSLS |
JGI25390J43892_100726881 | 3300002911 | Grasslands Soil | GRTLAMIHALGRVLHSEIDDSHMCLDAEVPASVAKRLRLKEYAVEETFPPPLS* |
JGI25617J43924_100273631 | 3300002914 | Grasslands Soil | LSIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIARRLRLKDFGVEETFPRVLS* |
JGI25617J43924_101684032 | 3300002914 | Grasslands Soil | VIRLSIRLPLAEGRTLALIHALGRVLHTEIDDSHMQLDAEVPASIAKRLRLKEYAVEETFPRTLS* |
JGI25389J43894_10795902 | 3300002916 | Grasslands Soil | LAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYELEELSHARSRNIE* |
JGI25616J43925_103513822 | 3300002917 | Grasslands Soil | AEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIVERLRLKAYAVEGTFYRVPS* |
Ga0066677_101311503 | 3300005171 | Soil | LSIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPSSVAKRLRLSKYRVDGTFQPSLS* |
Ga0066680_101288531 | 3300005174 | Soil | ESLSIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPVSIAKRLRLKAYAVQGTSPRVVS* |
Ga0066679_109185142 | 3300005176 | Soil | TLSIRLPLAEGRTLAMIHSLGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYELEELSRTRSRNIE* |
Ga0066684_100726051 | 3300005179 | Soil | RLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEIPSSVAKRLRLNEFRVNGTFRASSS* |
Ga0066704_101406771 | 3300005557 | Soil | RILALIHALGRVVHSEIDDSHIRLDAEIPSSVAKRLGLREYRVDGTFQPSPS* |
Ga0066703_102589591 | 3300005568 | Soil | LSIRLPLAEGRILALIHALGRVVHSEIDDSHIRLDAEIPSSVAKRLGLREYRVDGTFQPSPS* |
Ga0066702_105492823 | 3300005575 | Soil | LAMIHALGRVLHSEIDDSHMRLDAEIPASIAKRLRLKEYAVEETFPGSLS* |
Ga0070763_104120492 | 3300005610 | Soil | RTLALIHALGRVLHSEVQDSHMLLEAEVPASIAKRLRLNDFAIKETLRHVLS* |
Ga0066696_102044381 | 3300006032 | Soil | PLAEGRILALIHALGRVVHSEIDDSHIRLDAEIPSSVAKRLGLREYRVDGTFQPSPS* |
Ga0075018_100438484 | 3300006172 | Watersheds | MIHALGRVLHSEIDDSHLRLEAEVPASIAKRLRLKEFAMEEPFRALSRNID* |
Ga0066658_100794644 | 3300006794 | Soil | AEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIATRLRLKEYAVQETFPRAVS* |
Ga0079221_104240273 | 3300006804 | Agricultural Soil | AEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLSKYVIEETFRSSTS* |
Ga0099791_100027268 | 3300007255 | Vadose Zone Soil | DAVVKISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEFAVEETFSRTLS* |
Ga0099791_101306041 | 3300007255 | Vadose Zone Soil | DAVVKISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKDFAVEETFSRTLS* |
Ga0099791_102046451 | 3300007255 | Vadose Zone Soil | EGRILAMIHALGRVLQSEIDDSHMRLAVEVPASVAKRLKLKEYAVEETFPRALSYD* |
Ga0099793_101737002 | 3300007258 | Vadose Zone Soil | LPLAEGRTLALIHALGRVLHSELDDSHMRLDAEVPASIAKRLRLKEYAVEEPFRALSRNIE* |
Ga0099794_100548734 | 3300007265 | Vadose Zone Soil | AVVKISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEFAVEETFSRTLS* |
Ga0099794_103349242 | 3300007265 | Vadose Zone Soil | SIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKDFAVEETFSRTLS* |
Ga0099794_105523851 | 3300007265 | Vadose Zone Soil | IRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEETFPRAIS |
Ga0066710_1004551734 | 3300009012 | Grasslands Soil | VTLSIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIATRLRLKEYAVEGTFPRVLS |
Ga0066710_1007176373 | 3300009012 | Grasslands Soil | VTLSIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIATRLRLKEYAVEETFPRVLS |
Ga0099829_110622712 | 3300009038 | Vadose Zone Soil | LPMAEGRTLALIHALGRVLHSEVDDAHMRLDAEVPASIARRLRLTDYAVEETSRRSLS* |
Ga0099830_118306661 | 3300009088 | Vadose Zone Soil | RTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEFAVEETFSRSVS* |
Ga0099828_102436643 | 3300009089 | Vadose Zone Soil | LAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEETFPRVLS* |
Ga0099828_105217651 | 3300009089 | Vadose Zone Soil | TLSIRLPLAEGRTLAMIHALGRVLHTEIDDSHMRLHAEIPASIAARLRLNNYVLKETFPRSLS* |
Ga0066709_1044005711 | 3300009137 | Grasslands Soil | TDPVVTISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIATRLRLKEYAVQETFPRVLS* |
Ga0134082_101826312 | 3300010303 | Grasslands Soil | TLSIRLPLAEGRTLALIHALGRVLHTEIDDSHMQLDAEVPASIAKRLRLKEYAVEEPFRALSRNIE* |
Ga0134082_102898091 | 3300010303 | Grasslands Soil | IRLPLAEGRALAMIHALGRVLHSEIDDSHMRLDAEIPSSVAKRLRLNEFRVNGTFRASSS |
Ga0134064_101666961 | 3300010325 | Grasslands Soil | LAEGRTLAMIHALGRVLHSEIDDSHMRLDAEIPSSVAKRLRLNEFRVNGTFRASSS* |
Ga0134062_100117181 | 3300010337 | Grasslands Soil | IRLPLAEGRTLAMIHALGRVLHSEIDDSLMRLDAEVPASIATRLRLKEYAVKETFPRVLS |
Ga0137392_104799891 | 3300011269 | Vadose Zone Soil | LAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEFAVEETFSRTLS* |
Ga0137392_114345572 | 3300011269 | Vadose Zone Soil | PVVTLSIRLPLAEGRTLAMIHALGRVLHSEIDDSYMRLDAEVPASIAKRLRLKEYAVEGTFPRSGS* |
Ga0137391_113336341 | 3300011270 | Vadose Zone Soil | PLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEFAVEETFSRTLS* |
Ga0137393_100535505 | 3300011271 | Vadose Zone Soil | LPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEGTFPRSVS* |
Ga0137393_103715891 | 3300011271 | Vadose Zone Soil | AEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEGTFPRVLS* |
Ga0137393_111139192 | 3300011271 | Vadose Zone Soil | LTLSIRLPLAEGRTLAMIHALGRVLHTEIDDSHMRLHAEIPASIAARLHLNKYVLKETFPRSLS* |
Ga0137393_111313222 | 3300011271 | Vadose Zone Soil | SIRLPMAEGRTLALIHALGRVLHSEVDDAHMRLDAEVPASIAKRLRLTDYAVKETSRRSLS* |
Ga0137393_112681792 | 3300011271 | Vadose Zone Soil | TDAVVKISIRLPLAEGRTLAMIHALGRVLRSEIDDSHMRLDAEVPASIAKRLRLKEFAVEETFSRTLS* |
Ga0137389_100140707 | 3300012096 | Vadose Zone Soil | TLSIRLPLAEGRTLALIHALGRVLHSELDDSHMRLDAEVPASIAKRLRLKEYAVEEPFRALSRNIE* |
Ga0137389_107165381 | 3300012096 | Vadose Zone Soil | LAMIHALGRVLHSEIDDSHMLLDAEVPASIAKRLRLKEYAVEGTFPRARS* |
Ga0137388_100886575 | 3300012189 | Vadose Zone Soil | SMRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEETFPRVLS* |
Ga0137388_103419801 | 3300012189 | Vadose Zone Soil | TDAVVKISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKKFAVEETFSRSTS* |
Ga0137388_105568953 | 3300012189 | Vadose Zone Soil | LPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEETFPRALS* |
Ga0137388_106054792 | 3300012189 | Vadose Zone Soil | SIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEIPSSVVKRLRLNEYRVDGTFQISLS* |
Ga0137388_107748922 | 3300012189 | Vadose Zone Soil | SIRLPLGEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPTSVAKRLRLKEFAMEETFSR* |
Ga0137364_102849213 | 3300012198 | Vadose Zone Soil | PVVTLRVRLPLAEGRTLAMIHALGRVLHSEIDDSHMCLDAEVPASVAKRLRLKEYAVEETFPRSLS* |
Ga0137383_107717301 | 3300012199 | Vadose Zone Soil | MPTDAVVKISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEFA |
Ga0137363_101563171 | 3300012202 | Vadose Zone Soil | LAEGRTLAMIHALGRVLHSEIDDSHVRLDAEVPASIAKRLRLKEYAVEEPFRAPSRNIE* |
Ga0137363_108024971 | 3300012202 | Vadose Zone Soil | IRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKDFAVEETFSRTLS |
Ga0137363_109910802 | 3300012202 | Vadose Zone Soil | RLPLADGRTLALIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEEPFRTLSRNME* |
Ga0137362_102035451 | 3300012205 | Vadose Zone Soil | KISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKDFAVEETFSRTLS* |
Ga0137362_104511423 | 3300012205 | Vadose Zone Soil | PVVTLSIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIARRLRLKDFGVEETFPRVLS* |
Ga0137362_116264271 | 3300012205 | Vadose Zone Soil | RTLALIHALGRVLHSEVDDAHMRLDAEVPASIAKRLRLTDYAVEETSRRPLS* |
Ga0137380_100396706 | 3300012206 | Vadose Zone Soil | AEGRTLAMIHALGRVLHAEIDDSHMRLRAEIPASIATRLRLNNYVLEETFPRSLS* |
Ga0137390_106759551 | 3300012363 | Vadose Zone Soil | MPTDPVVKISIRLPLAEGRTLAMIHALGRVLRSEIDDSHMRLDAEVPASIAKRLRLKEFAVEETFSRTLS* |
Ga0137390_115497062 | 3300012363 | Vadose Zone Soil | RLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEGTIPRARA* |
Ga0137390_117226511 | 3300012363 | Vadose Zone Soil | IRLPLAEGRTLAMIHALGRVLHSEIDDSYMRLDAEVPASIAKRLRLKEYAVEGTFPRSGS |
Ga0134040_12616612 | 3300012389 | Grasslands Soil | LTLSIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEIPSSVAKRLRLDDYKVEGTFQPSLS* |
Ga0137358_109140262 | 3300012582 | Vadose Zone Soil | VKISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEFAVEETFSRSVS* |
Ga0137398_105750701 | 3300012683 | Vadose Zone Soil | AEGRTLAMIHALGRVLQSEIDDSHMRLDVEVPASIAKRLKLKEYVVEETFPRALSYD* |
Ga0137404_108612062 | 3300012929 | Vadose Zone Soil | GGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKDFAVEETFSRTLS* |
Ga0137404_109446681 | 3300012929 | Vadose Zone Soil | SVRLPLAEGRTLAMIHALGRVLQSEIDDSHMRLAVEVPASVAKRLKLKEYAVEETFPRALSYD* |
Ga0137403_102778931 | 3300015264 | Vadose Zone Soil | ISIRLPLAEGRTLAMIHALGRVLQSEIDDSHMRLAVEVPASVAKRLKLKEYAAEETFPRALSYD* |
Ga0137403_109849662 | 3300015264 | Vadose Zone Soil | TDAVVKISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKDFAVEETFSRTLS* |
Ga0187802_100410251 | 3300017822 | Freshwater Sediment | LAEGRTLALIHALGRVLHSEVDDSHMRLHAEVPVSVAKRLKLNGFSVKETSELPIS |
Ga0187766_107423902 | 3300018058 | Tropical Peatland | IRLPLVEGRTLAMIHALGRVLHTELDDSHMRLQAEIPASIAKRLRLKEFTVEETFRPVAS |
Ga0187766_113589101 | 3300018058 | Tropical Peatland | LAMIYALGRVLHTELDDSHMRLHAEIPASVAKLLRLQNFTVEETFRNSLS |
Ga0137408_10804592 | 3300019789 | Vadose Zone Soil | EGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIARRLRLKEFAVEETFPRVLS |
Ga0179592_101417661 | 3300020199 | Vadose Zone Soil | VALSIRLPLSEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLNEYAVEEAFPRLLS |
Ga0179592_102370352 | 3300020199 | Vadose Zone Soil | LPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEETFPRSLS |
Ga0210407_111190291 | 3300020579 | Soil | PLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIATRLRLKKYAVEETFPRVVS |
Ga0210403_101068254 | 3300020580 | Soil | RTLALIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEEPFRALSRNIE |
Ga0210403_115365521 | 3300020580 | Soil | EGRTLAMIYALGRVLHTELDDSHMRLQAEIPASIAKLLRLQNYAVEGTFRRSVS |
Ga0210404_105198361 | 3300021088 | Soil | LTLALVHALGRVLHSEVEDSHMRLDAEVPASIAKRLRLNDFAVKGTFRQSVS |
Ga0210408_100950895 | 3300021178 | Soil | SLSIRLPLAEGRTLAMIHALGRVIHSEIEDSHMRLDAEVPASIAKRLRLNEYAMEETFPRVVS |
Ga0242660_11802232 | 3300022531 | Soil | VVSLSIRLPLAEGRTLAMVHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLNEYAVEETFPRLLS |
Ga0137417_11024763 | 3300024330 | Vadose Zone Soil | RTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEETFPRSLS |
Ga0209239_11953192 | 3300026310 | Grasslands Soil | GRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYELEELSHARSRNIE |
Ga0209268_11588882 | 3300026314 | Soil | PLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPSSVAKRLRLNDYRVKGTFQPSLS |
Ga0209687_12581502 | 3300026322 | Soil | RTLAMIHALGRVLHSEIEDSHMRLDAEIPSSVAKRLRLNDYRVEGTFPSSLS |
Ga0209470_10266931 | 3300026324 | Soil | RILALIHALGRVVHSEIDDSHIRLDAEIPSSVAKRLGLREYRVDGTFQPSPS |
Ga0209152_100679561 | 3300026325 | Soil | MPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKDYSVEETFPRAVS |
Ga0209802_10482234 | 3300026328 | Soil | RTLAMIHALGRVLHSEIDDSHMRIDAEVPASIAKRLRLREFAVGETFSRSVS |
Ga0209802_10936261 | 3300026328 | Soil | MPTDAVVKISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRIDAEVPASIAERLRLREFAVEETFSR |
Ga0209806_11218241 | 3300026529 | Soil | LSIRLPLAEGRILALIHALGRVVHSEIDDSHIRLDAEIPSSVAKRLGLREYRVDGTFQPSPS |
Ga0209157_10240987 | 3300026537 | Soil | AEGRILALIHALGRVVHSEIDDSHIRLDAEIPSSVAKRLGLREYRVDGTFQPSPS |
Ga0209648_105957632 | 3300026551 | Grasslands Soil | LSIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPTSIATRLRLKEYAVEETFPRVLS |
Ga0208983_10010001 | 3300027381 | Forest Soil | LPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVETFPRALS |
Ga0209588_10392751 | 3300027671 | Vadose Zone Soil | AVVKISIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEFAVEETFSRTLS |
Ga0209580_100243285 | 3300027842 | Surface Soil | RLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEIPSSVVKSLRLDDYRVGGTFQPTLS |
Ga0209701_106386001 | 3300027862 | Vadose Zone Soil | RLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEFAVEETFSRSTS |
Ga0209488_109091361 | 3300027903 | Vadose Zone Soil | PLAEGRTLAMIHALGRVLHSEIDDSHMRLEAEVPESIARRLKLREYLVQETFPRQLS |
Ga0318501_103289422 | 3300031736 | Soil | LAEGRTLALIHALGRVLHSEIDDSHMRLDAEIPSSVAKRLGLSEYRVDGTFQPSPS |
Ga0318543_104933341 | 3300031777 | Soil | SIRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEIPSSVAKRLRLNEYRVDGTFPPSP |
Ga0307479_111969332 | 3300031962 | Hardwood Forest Soil | IRLPLAEGRTLAMIHALGRVLHSEIDDSHMRLDAEVPASVAQRLRLKEFAVEETFPRVLS |
Ga0307470_119037901 | 3300032174 | Hardwood Forest Soil | VSLSIRLPLAEGRTLAMIHALGRVIHSEIEDSHMRLDAEVPASIAKRLRLNEYAVEETFPRVVS |
Ga0307471_1009407971 | 3300032180 | Hardwood Forest Soil | TLAMVHALGRVLHSEIDDSHMRLDAEVPASIARRLRLKEFAVKETFPRVLS |
Ga0307472_1027169442 | 3300032205 | Hardwood Forest Soil | EGRTLALIHALGRVLHSEIDDSHMRLDAEVPASIAKRLRLKEYAVEEPFRALSRNIE |
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