Metagenome / Metatranscriptome Family F097989

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097989
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	62 residues
Representative Sequence	MAGRIAMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLESN
Number of Associated Samples	82
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	3.85 %
% of genes from short scaffolds (< 2000 bps)	3.85 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (96.154 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (42.308 % of family members)
Environment Ontology (ENVO)	Unclassified (39.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.077 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1JGI25382J37095_101119741 2JGI25388J43891_10337382 3JGI25615J43890_10506201 4JGI25615J43890_10831831 5Ga0066673_105700292 6Ga0066690_100138867 7Ga0066690_103041281 8Ga0066676_103262542 9Ga0066682_103112622 10Ga0066682_109226791 11Ga0066697_107759142 12Ga0066701_100161941 13Ga0066661_102619572 14Ga0070763_101706611 15Ga0070763_107809252 16Ga0075030_1010473512 17Ga0075018_100667763 18Ga0075021_105064301 19Ga0079220_107276282 20Ga0099793_101343292 21Ga0099793_104289561 22Ga0099829_110633522 23Ga0099830_108431621 24Ga0099830_110030722 25Ga0099830_110707242 26Ga0066709_1028255471 27Ga0099796_100831961 28Ga0134109_101334551 29Ga0134067_101858552 30Ga0134062_100206631 31Ga0137392_115623351 32Ga0137388_100262061 33Ga0137388_102985111 34Ga0137383_113417671 35Ga0137363_105497182 36Ga0137363_111845632 37Ga0137363_118046661 38Ga0137399_101607811 39Ga0137399_111609891 40Ga0137399_112122231 41Ga0137362_108184852 42Ga0137381_102289661 43Ga0137378_118218651 44Ga0137377_105251631 45Ga0137386_100878413 46Ga0137390_101921003 47Ga0137390_105312531 48Ga0137390_105312541 49Ga0137390_109250372 50Ga0137358_104427811 51Ga0137395_100081627 52Ga0137419_101932271 53Ga0137419_107796602 54Ga0137416_105298162 55Ga0137407_110281692 56Ga0134076_102760321 57Ga0134081_100881491 58Ga0134078_103628781 59Ga0137420_13326563 60Ga0137418_103106701 61Ga0134083_101255431 62Ga0066667_107905271 63Ga0066667_107986902 64Ga0193707_11676331 65Ga0179592_101873713 66Ga0179592_102322822 67Ga0210399_101544941 68Ga0210401_101968343 69Ga0210404_101858091 70Ga0210400_106647712 71Ga0210394_107650252 72Ga0210394_114821111 73Ga0210384_117313021 74Ga0179589_103882721 75Ga0137417_11260351 76Ga0209155_10704381 77Ga0209154_12532481 78Ga0209472_10573154 79Ga0209802_11084972 80Ga0209375_13111381 81Ga0209267_12997191 82Ga0257151_10132921 83Ga0257181_10944571 84Ga0257168_11233631 85Ga0209807_10808521 86Ga0209160_11992452 87Ga0209157_11792341 88Ga0209056_104210531 89Ga0209648_102625453 90Ga0209648_102765033 91Ga0209648_104464401 92Ga0179587_104592512 93Ga0209076_10526552 94Ga0209180_103170092 95Ga0209283_101807393 96Ga0209590_109909111 97Ga0209488_101921473 98Ga0222749_105835291 99Ga0170823_130309452 100Ga0307469_119495301 101Ga0307477_100661053 102Ga0307477_100749103 103Ga0307479_116899331 104Ga0307472_1022467722
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104. 1JGI25382J37095_101119741 2JGI25388J43891_10337382 3JGI25615J43890_10831831 4Ga0066673_105700292 5Ga0066690_103041281 6Ga0066676_103262542 7Ga0066682_109226791 8Ga0066661_102619572 9Ga0070763_101706611 10Ga0070763_107809252 11Ga0075030_1010473512 12Ga0075018_100667763 13Ga0099793_101343292 14Ga0099793_104289561 15Ga0099829_110633522 16Ga0099830_108431621 17Ga0099830_110030722 18Ga0099830_110707242 19Ga0066709_1028255471 20Ga0099796_100831961 21Ga0137392_115623351 22Ga0137363_105497182 23Ga0137363_111845632 24Ga0137363_118046661 25Ga0137362_108184852 26Ga0137390_101921003 27Ga0137390_105312541 28Ga0137407_110281692 29Ga0137418_103106701 30Ga0066667_107986902 31Ga0179592_101873713 32Ga0210399_101544941 33Ga0210401_101968343 34Ga0210394_114821111 35Ga0210384_117313021 36Ga0257181_10944571 37Ga0209648_102625453 38Ga0209180_103170092 39Ga0307477_100661053
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56. 1Ga0210400_106647712 2JGI25382J37095_101119741 3JGI25388J43891_10337382 4JGI25615J43890_10831831 5Ga0066661_102619572 6Ga0070763_101706611 7Ga0075018_100667763 8Ga0075021_105064301 9Ga0099829_110633522 10Ga0099830_110707242 11Ga0099796_100831961 12Ga0137388_100262061 13Ga0137388_102985111 14Ga0137363_111845632 15Ga0137363_118046661 16Ga0137399_101607811 17Ga0137390_109250372 18Ga0137395_100081627 19Ga0137419_107796602 20Ga0137416_105298162 21Ga0134076_102760321 22Ga0134081_100881491 23Ga0134083_101255431 24Ga0179592_101873713 25Ga0179592_102322822 26Ga0210399_101544941 27Ga0210401_101968343 28Ga0210404_101858091 29Ga0210394_114821111 30Ga0210384_117313021 31Ga0137417_11260351 32Ga0257181_10944571 33Ga0209160_11992452 34Ga0209648_104464401 35Ga0209076_10526552 36Ga0209180_103170092 37Ga0209283_101807393 38Ga0209488_101921473 39Ga0170823_130309452 40Ga0307477_100661053 41Ga0307477_100749103 42Ga0307479_116899331 43Ga0307472_1022467722
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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.53% β-sheet: 11.76% Coil/Unstructured: 64.71%
Feature Viewer
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Predicted 3D Structure

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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07238	PilZ	41.35
PF00990	GGDEF	6.73
PF12680	SnoaL_2	0.96
PF01197	Ribosomal_L31	0.96
PF00512	HisKA	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0254	Ribosomal protein L31	Translation, ribosomal structure and biogenesis [J]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	3.85 %
Unclassified	root	N/A	96.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	3.85 %
Unclassified	root	N/A	96.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	3.85 %
Unclassified	root	N/A	96.15 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	3.85 %
Unclassified	root	N/A	96.15 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300010159\|Ga0099796_10083196	All Organisms → cellular organisms → Bacteria → Acidobacteria	1177	Open in IMG/M
3300026316\|Ga0209155_1070438	All Organisms → cellular organisms → Bacteria → Acidobacteria	1322	Open in IMG/M
3300026328\|Ga0209802_1108497	All Organisms → cellular organisms → Bacteria → Acidobacteria	1237	Open in IMG/M
3300026551\|Ga0209648_10262545	All Organisms → cellular organisms → Bacteria → Acidobacteria	1269	Open in IMG/M

Showing 1 to 4 of 4 entries

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Environmental Properties

Associated Habitat Types

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Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	2.88%
Terrestrial	Environmental → Terrestrial	97.12%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Sediment	2.88%
Soil	Environmental → Terrestrial → Soil	97.12%

Habitat	Taxonomy	Distribution
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.62%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.58%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	42.31%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.88%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M

Showing 1 to 10 of 82 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25382J37095_101119741	3300002562	Grasslands Soil	MAGRIALPPTSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQCLGFHGYAEIQGLNLFNDILQ
JGI25388J43891_10337382	3300002909	Grasslands Soil	MAGRVAIPPMTEEGNRAVLPLGFVRGLLDTIEKPLMVAERNGNLLLINTRAKQFLESHGHPTTPGLNLFKDLLK
JGI25615J43890_10506201	3300002910	Grasslands Soil	MGGRVALPPMSEEGKRAVVPLGFVRGLLDTIEKPMIVAERSGNLLLVNNRAKQFLESHGYATTPGLNLFNDLLRV
JGI25615J43890_10831831	3300002910	Grasslands Soil	MAGRIVLPPMSEAGNRTALPLEFVRGLLDSIDRPLMVAERSGNLLLINTRATQFLESCGNAISPSLNLFNDFLKVDARKIFDE
Ga0066673_105700292	3300005175	Soil	MAGQITVPPMSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNSRAR
Ga0066690_100138867	3300005177	Soil	MAGRITVPPMSEEGNRTVLPLGYVTALLDAMEKPLIVVERSGNILMVNSRARQFLESRGYPA
Ga0066690_103041281	3300005177	Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQF
Ga0066676_103262542	3300005186	Soil	MAGRIALPPMSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNL
Ga0066682_103112622	3300005450	Soil	MAGRIALPPMSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQCLGFHG
Ga0066682_109226791	3300005450	Soil	MPGRIVMPPIAEERNRATLPIGFVRGLLDTMEKPLIVAERSGRLLLVNTRARQFLESTGYATTPGLNLFNDFLRVDAR
Ga0066697_107759142	3300005540	Soil	MAGRVAIPPMTEEGNRAVLPLGFVRGLLDTIEKPLMVAERNGNLLLINTRAKQFLESHGHPTTPG
Ga0066701_100161941	3300005552	Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNFLLVNTRAEQFVESHGYAITPGLN
Ga0066661_102619572	3300005554	Soil	MAGRIAMPRIAEEGNLASLPIRFVRGLLDTMDKPLIVAERSGRLLLVNTRAKQFLESNGY
Ga0070763_101706611	3300005610	Soil	MAGRTVLPPMSEERNRAALPIEFVSSLLDKVEKPLIVAERNGNLLLVNARARQSLERYGYGEIKGSNL
Ga0070763_107809252	3300005610	Soil	MEGRITTPPMPEEGNRTVLPLGFVSGLLDMIEKPLIVAGRS
Ga0075030_1010473512	3300006162	Watersheds	MAGRIAVPPLLGERNGATIPLGFVNGLLDKIEKPLIVGERGG
Ga0075018_100667763	3300006172	Watersheds	MPPMSEEGNRATLPLGFVRGLLDTIEKPLIVAERSGNFLLVNARASQFLESLGHTTAQSLNLFN
Ga0075021_105064301	3300006354	Watersheds	MAGRIALPPMSEEGNRTALPLGFVRGLLDTIDKPLIVAERSGNLLLINTRARQFLESSGYEITPSLNLFNDF
Ga0079220_107276282	3300006806	Agricultural Soil	MAGRIAVPPMAEEGSRALLPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQFVESHGY
Ga0099793_101343292	3300007258	Vadose Zone Soil	MAEEGNRTVLPLGFVSGLLDMIEKPLIVAERSGNLLFVNIRARRCMESRGYTAIQGLNLFGDVLHVESGKIFD
Ga0099793_104289561	3300007258	Vadose Zone Soil	MGGRIAVPTVSEEGNRTVVPLGHVRGLLDTIEKPLLVAQRSGNLLLVNTRAKQFLESHGYPLTPGLN
Ga0099829_110633522	3300009038	Vadose Zone Soil	MVGRIVTPPPSVEKNRAVLSLDFVGGLLDTIEKPLIVTERNGNLLLVNTRARQCLEFHGYTATQGLNLFDDL
Ga0099830_108431621	3300009088	Vadose Zone Soil	MSEEGNRAVLPLGFVRGLLDTIEKPLIVAERSGNLLLINTRARQFLESHGYATIQGINLFNDLLQVD
Ga0099830_110030722	3300009088	Vadose Zone Soil	MPGRIALSEERNRATLPLGFVNALLDKIEKPLIVAERSGNLLLVNAQAAQYLES
Ga0099830_110707242	3300009088	Vadose Zone Soil	MGGRVALPPMSEEGKRAVVPLGFVRGLLDTIEKPMIVAERSGNLLLVNNRAKQFLESHG
Ga0066709_1028255471	3300009137	Grasslands Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNFLLVNTRAEQFVESHGYAITPGLNVFKDLLKTNA
Ga0099796_100831961	3300010159	Vadose Zone Soil	MAGRIVLPPISEDGKPTALPLGFVRGLLDTLEKPMIVAERSGNLLLANSRARQFLDSD
Ga0134109_101334551	3300010320	Grasslands Soil	MAGRIAVPPMAEEGSRALLPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQFIESKEYAATSGLNLF
Ga0134067_101858552	3300010321	Grasslands Soil	MSQEGNRAVLPLGFVSGLLDMIEQPLIVAERSGNLLFVNTRARKCLESRGYMAIQGLNLFGDLLHV
Ga0134062_100206631	3300010337	Grasslands Soil	MAGRIAVPPMAEEGRALLPLDFVRGLFNTIEKALIVAERNGNLLLVNTRAEQFVESHG
Ga0137392_115623351	3300011269	Vadose Zone Soil	MAGRIVMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLESHGYATIQGMNLFS
Ga0137388_100262061	3300012189	Vadose Zone Soil	MAGRIVIPPISEERNRAASLPLGFVSGLLDTIEKPLIVAERSGQLLLVNTRARQFLDSYGYAATPSLNLFNDF
Ga0137388_102985111	3300012189	Vadose Zone Soil	MAGRIVLPPMSEERNRAVLPLGFVRGLLDTIEKPLIVAERDGNLLLINTRARQRLESYGYATTPGFNL
Ga0137383_113417671	3300012199	Vadose Zone Soil	MAGRIALPPMSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQCLGFHGNAEIQG
Ga0137363_105497182	3300012202	Vadose Zone Soil	MAGRITTPPMSQEGNRAMLPLGFVSGLLEMIEQPLIVAERSGNLLFVNTRARKCME
Ga0137363_111845632	3300012202	Vadose Zone Soil	MPPIVEEGNRASLPIGYVRGLLDTVEKPLIVAERSGRLLLVNTRGRQFLESNGHTT
Ga0137363_118046661	3300012202	Vadose Zone Soil	MGGRVAVPPMSEEEKRAVVPLGLVRGLLDTIERPMIVAERSGNVLLVNTPAKQFLESQGYSATPGLNLFNDVLRVDARRVFGAL
Ga0137399_101607811	3300012203	Vadose Zone Soil	MAGRIAVPPMTEEGSRASLPLGFIRGLFETIENPLIVTERNGNLLIANTRAERFVES
Ga0137399_111609891	3300012203	Vadose Zone Soil	MAGRITTPPVSEEGNRTVLPLSFVSGLLDMIEKPLIVAERSGN
Ga0137399_112122231	3300012203	Vadose Zone Soil	MAGRIAVPPRSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNTRARQC
Ga0137362_108184852	3300012205	Vadose Zone Soil	MAGRIVLPPMSEAGNRTALPLEFVRGLLDSIDRPLMVAERSGNFLLINNRAKHFLESSGHAISPSL
Ga0137381_102289661	3300012207	Vadose Zone Soil	MAGRIVMPPIAEEGNRASLPIGFVRGLLDTMEKPLIVAERSGRLLLVNTRARQFLESSGH
Ga0137378_118218651	3300012210	Vadose Zone Soil	MSGRIAVPPLSEERNRATLPLGFVNALLDKIEKPLIVAERSGNLLLVNAQAAQYLESC
Ga0137377_105251631	3300012211	Vadose Zone Soil	MSQEGNRAVLPLGFVSGLLDMIEQPLIVAERSGNLLFVNTRARKCL
Ga0137386_100878413	3300012351	Vadose Zone Soil	MSGRIAVPPLSEERNRATLPLGFVNALLDKIEKPLIVAERSGNLLLVN
Ga0137390_101921003	3300012363	Vadose Zone Soil	MAGRVVMPPKSEEENRAFVPLGFVRGLFDTIEKPMIVAERSGNPLLINVRAGQLLESLGYAVTPGLNLF*
Ga0137390_105312531	3300012363	Vadose Zone Soil	MPPVSEEGNRALLPLGFVRGLLDTIEKALIVAERSGNLLLVNTRARQFLESY
Ga0137390_105312541	3300012363	Vadose Zone Soil	MPPVSEEENRAVLPLGFVRGLLDTIEKALIVAERSGNLLLVNTRARQFLESY
Ga0137390_109250372	3300012363	Vadose Zone Soil	MSGRIAVPPLSEERNRATLPLGFVNALLDKIEKPLIVAERSGNLLLVNAQAAQYLESCGN
Ga0137358_104427811	3300012582	Vadose Zone Soil	MAGRITTPPMSEEGNRAMLPLGFVRGLLDMIEKPLMVAERSGNLLFVN
Ga0137395_100081627	3300012917	Vadose Zone Soil	MVGRIAAPPMAEEGSRAFLPLGFVRGLFNTVEKPLIVAERNGNLLLINTRAEQFVESHGYATTPGLNLFKDILRVDAR
Ga0137419_101932271	3300012925	Vadose Zone Soil	MAGRIAAPPMAEEGSRAFLPLGFVRGLFNTVEKPLIVAERNGNLLLINTRAEQF
Ga0137419_107796602	3300012925	Vadose Zone Soil	MAGRITTPPVSEEGNRTVLPLSFVSGLLDMIEKPLIVAERSGNLLFVNSR
Ga0137416_105298162	3300012927	Vadose Zone Soil	MGGRIAVPTVSEEGNRTVVPLGHVRGLLDTIEKPLLVAQRSGNLLLVNTRAKQFLESHGYPLIPGL
Ga0137407_110281692	3300012930	Vadose Zone Soil	MAGRIVLPAMSEAGNRASLPLGFVRGLLDSIERPLIVAERSGNLLLINTR
Ga0134076_102760321	3300012976	Grasslands Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQFVESHGYAITPGLNLFKDLLK
Ga0134081_100881491	3300014150	Grasslands Soil	MAGQITVPPMSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNSRARQFLESRGYPAIQGMNLFSDL
Ga0134078_103628781	3300014157	Grasslands Soil	MAGRIAVPPMAEEGSRALLPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQFIESKEYAATSGLNLFRDLLKVDARKIF
Ga0137420_13326563	3300015054	Vadose Zone Soil	MSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLEAHGYATIQGINLFSDLLGWIHGRSSAG
Ga0137418_103106701	3300015241	Vadose Zone Soil	MAGRIAVPPRSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNSRARQCLGSRGYPAIQGMNLFS
Ga0134083_101255431	3300017659	Grasslands Soil	MPGRIVMPPIAEERNRATLPIGFVRGLLDAMEKPLIVAERSGRLLLVNTRARQFLESTGYATTPGLNLFNDF
Ga0066667_107905271	3300018433	Grasslands Soil	MAGRITVPPMSEEGNRTVLPLGYVTALLDAMEKPLIVVERSGNILMVNSRARQF
Ga0066667_107986902	3300018433	Grasslands Soil	MAGRITVPPRSEEGNRTVLPLGYVTALVDTMDNPLIVVERS
Ga0193707_11676331	3300019881	Soil	MSEEGNRAMLPLGFVSGLLDMIEQPLIVAERSGNLLFVNTRARKCME
Ga0179592_101873713	3300020199	Vadose Zone Soil	MAGRITTPPMSEEGNQAVLPLGFVRGLLDVIEKPLIVAERSGNLLFVNSRARQAMESRGYTAIQ
Ga0179592_102322822	3300020199	Vadose Zone Soil	MAGRIVLPAMSEAGNRASLPLGFVRGLLDSIERPLIVAERSGNLLLINTRATQFLESCGNAISPSLNLFNDFLKVDAR
Ga0210399_101544941	3300020581	Soil	MPLLSEEGNRTVLPFGLVRGLLETIEKPLMVVERSGNLLLVNTRAKQFLESHGYEIAPGLNLFNDFLKADAR
Ga0210401_101968343	3300020583	Soil	MAGRIVIHPMSEERNRAVLPLGFVSGLLDKVDNPLMVGERNGNLLLVNSRARKLLESQGYGEVSGLNLFNDVLK
Ga0210404_101858091	3300021088	Soil	MGGRVALPPMSEQGKQAVAPLGLARGLLDTIEKPMIVAERSGIVLLINIHAKQFLESQGSMATPGLNLFSDVLRVDARRIFG
Ga0210400_106647712	3300021170	Soil	MAGRIAMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLESN
Ga0210394_107650252	3300021420	Soil	MAGRIAVPPMSEENRSTLPLGFVRGLLDTIEKPLIVAERSGNLLLVNARARQFLESHGFT
Ga0210394_114821111	3300021420	Soil	MAGRIIVPPMSEERDRVALPLAYVNYLLDAVDKPLIVAERNGNLLLVSSRARTFLE
Ga0210384_117313021	3300021432	Soil	MAGRIALHPVSEERNRAVLPMGFVSGLLDKVENPLMVGERSGNLILVNSRARQLLESRGY
Ga0179589_103882721	3300024288	Vadose Zone Soil	MAGRITTPPMSQEGNRAMLPLGFVSGLLEMIEQPLIVAER
Ga0137417_11260351	3300024330	Vadose Zone Soil	MSGRITTPPISEEGNRAVLPLVFVSGLLDMIEQPLIVAERSGNLLFVNTRARKCMESRGY
Ga0209155_10704381	3300026316	Soil	MAGRVAIPPMTEEGNRAVLPLGFVRGLLDTIEKPLMVAERNGNLLLINTRAKQFLESHGHPTTPGLNLFKDL
Ga0209154_12532481	3300026317	Soil	MAGRITVPPMSEEGNRTVLPLGYVTALLDAMEKPLIVVERSGNILMVNSRARQFLESRGYPAIQGMNLFS
Ga0209472_10573154	3300026323	Soil	MAGQITVPPMSEEGNRTVLPLGYVTALLDTMEKPLIVVERSGNILMVNS
Ga0209802_11084972	3300026328	Soil	MAGRIAVPPMAEEGSRALLPLDFVRGLFNTIEKALIVAERNGNLLLVNTRAEQFIESKEYAATSGLNLFRDLLKVD
Ga0209375_13111381	3300026329	Soil	MPGRIVMPPIAEERNRATLPIGFVRGLLDTMEKPLIVAERSGRLLLVNTRARQFLESTGYATTPGLNLFNDFLRVDA
Ga0209267_12997191	3300026331	Soil	MAGRIAVPPMAEEGSRALIPLDFVRGLFNTIEKPLIVAERNGNLLLVNTRAEQFVESHGYAITPGLN
Ga0257151_10132921	3300026341	Soil	MAGRITTPPMSEEGNRTVLPLSFVSGLLDMIEKPLIVAERSGNLLFVNSRAR
Ga0257181_10944571	3300026499	Soil	MAGRIVIPPMSEERNRGSLPLGFVNTLLDKIEKPLIVAERSGNLL
Ga0257168_11233631	3300026514	Soil	MPLGKTFTTPNEGRNHLMAGRIAMPPMSEENRVVLPLGFVRGLLDTIEKPLIVAERSGNLLLVNTRARQFLEAHGYATIQGINLFSD
Ga0209807_10808521	3300026530	Soil	MAGRITVPPMSEEGNRTVLPLGYVTALLDAMEKPLIVVERSGNILM
Ga0209160_11992452	3300026532	Soil	MAGRVVMPPMSEEGNRVVVPFGFVRGLFDTIEKPMIVAERNGNPLLINARARQLLESLGYAITPGLNLFKDLLQ
Ga0209157_11792341	3300026537	Soil	MAGRIALPPMSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQCLGFHGNAEIQGLNLFNDIL
Ga0209056_104210531	3300026538	Soil	MAGRITTPPMSQEGNRAVLPLGFVSGLLDMIEQPLIVAERSGNLLFVNTRAR
Ga0209648_102625453	3300026551	Grasslands Soil	MAGRITTPPMSEEGNRVVVPLGFVRGLLDMIEKPLIVAERSGNLLFVNS
Ga0209648_102765033	3300026551	Grasslands Soil	MAGRIVMPPIAEEGNRASLPIGFVRGLLDTMEKPLIVAERSGRLLLVNTRARQFLES
Ga0209648_104464401	3300026551	Grasslands Soil	MVGRISMPRMSEEGNRAVLPLGFVLGLLDTIEKPLMVAERSGNLLLVNTRARQFLESHGYATTPGLNLFKD
Ga0179587_104592512	3300026557	Vadose Zone Soil	MAGRITTPPMLEEGNQAVLPLGFVRGLLDVIEKPLIVAERSGNLLFVNSRARQAMESRGYTAIQ
Ga0209076_10526552	3300027643	Vadose Zone Soil	MEGRITTPPMAEEGNRTVLPLGFVSGLLDMIEKPLIVAERSGNLLFVNIRARRCMESRGYTAIQGLNLFGDVLHVES
Ga0209180_103170092	3300027846	Vadose Zone Soil	MPGRIAIPPLSEERNRTTLPLGLVNALLDKIEKPLIVAERSGNLLLVNTRATQYLESRGNATIRGLNLFNDVLEIDSTEIFGKVEKG
Ga0209283_101807393	3300027875	Vadose Zone Soil	MVGRISMPPVSEEENRAVLPLGFVRGLLDTIEKALIVAERSGNLLLVNTRARQFLESYG
Ga0209590_109909111	3300027882	Vadose Zone Soil	MAGRIALPPTSEERNSAVLPLGVVSRLLDTIEEPLMVAERSGNLLLVNTRARQC
Ga0209488_101921473	3300027903	Vadose Zone Soil	MAGRITTPPMSQEGNRAMLPLGFVSGLLEMIEQPLIVAERSGNLLFVNTRARKCMEYRG
Ga0222749_105835291	3300029636	Soil	MAGRIVMHPMSEERNRAVLPLGFVSGLLDKVENPLMVGERSGNLLLVNSRARKLLESQGYGEVSGLNL
Ga0170823_130309452	3300031128	Forest Soil	MAGRIVLPPMSEAGNRTALPLGFVRGLLNTIDKPLMVAERSGNFLLINDRAKQFLESNGHAISPSLNLFNDKKEKNKRKEES
Ga0307469_119495301	3300031720	Hardwood Forest Soil	MAGRIVMHPMSEERNRAVLPLGFVSGLLDKVENPLMVGERSGNLLLVNSRAR
Ga0307477_100661053	3300031753	Hardwood Forest Soil	VPPISEERSRALPLGFVNGLLDKADKPLIVAERSGSILLFNTRARH
Ga0307477_100749103	3300031753	Hardwood Forest Soil	MAGRVVMPPKSEEENRAFVPLGFVRGLFDTIEKPMIVAERNGNPLVINVRARQLLESLGYAIT
Ga0307479_116899331	3300031962	Hardwood Forest Soil	MAGRFAVTRMTEEGSRTFLPLGFVRGLLDTLEKPMIVAERSGNLLLFNTRAEQFVESLGYVTTPGLNLFKDLL
Ga0307472_1022467722	3300032205	Hardwood Forest Soil	MAGRIATSPMAEEGNRTVLPLGLVRGLLDKIEKPLIVAERSGNLLLVNAHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters