Metagenome Family F097973

Basic Information
Family ID	F097973
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	53 residues
Representative Sequence	MANLDFCTTPFVEFDDTKIFGTADTVANFAKVAGDDASLQRKLSALQRGPVRFY
Number of Associated Samples	72
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	83.65 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.25

Most Common Taxonomy
Group	Unclassified (72.115 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (42.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (77.885 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.49% β-sheet: 0.00% Coil/Unstructured: 69.51%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00072	Response_reg	1.92
PF00149	Metallophos	1.92
PF07519	Tannase	1.92
PF07411	DUF1508	0.96
PF06210	DUF1003	0.96
PF04392	ABC_sub_bind	0.96
PF01979	Amidohydro_1	0.96
PF14023	DUF4239	0.96
PF07396	Porin_O_P	0.96
PF12681	Glyoxalase_2	0.96
PF11604	CusF_Ec	0.96
PF00903	Glyoxalase	0.96
PF02518	HATPase_c	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.96
COG3422	Uncharacterized conserved protein YegP, UPF0339 family	Function unknown [S]	0.96
COG3746	Phosphate-selective porin	Inorganic ion transport and metabolism [P]	0.96
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
All Organisms	root	All Organisms	27.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
cellular organisms	root	All Organisms → cellular organisms	27.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	27.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	23.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	22.12 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.27 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	14.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.96 %
Boseaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12.50 %
Bosea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea	0.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12.50 %
unclassified Bosea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea	0.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	72.12 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12.50 %
Bosea sp. BIWAKO-01	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. BIWAKO-01	0.96 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_311438	Not Available	1219	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101496876	Not Available	833	Open in IMG/M
3300000559\|F14TC_100140678	Not Available	628	Open in IMG/M
3300004479\|Ga0062595_100100409	Not Available	1536	Open in IMG/M
3300004479\|Ga0062595_101018144	Not Available	714	Open in IMG/M
3300005093\|Ga0062594_101200439	Not Available	752	Open in IMG/M
3300005329\|Ga0070683_100572295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1080	Open in IMG/M
3300005338\|Ga0068868_100430825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1144	Open in IMG/M
3300005338\|Ga0068868_100615097	Not Available	964	Open in IMG/M
3300005364\|Ga0070673_100727915	Not Available	912	Open in IMG/M
3300005434\|Ga0070709_10592167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	853	Open in IMG/M
3300005434\|Ga0070709_11371465	Not Available	572	Open in IMG/M
3300005436\|Ga0070713_102103857	Not Available	547	Open in IMG/M
3300005439\|Ga0070711_100734347	Not Available	833	Open in IMG/M
3300005439\|Ga0070711_100857557	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300005548\|Ga0070665_101738971	Not Available	631	Open in IMG/M
3300005578\|Ga0068854_102228938	Not Available	507	Open in IMG/M
3300005718\|Ga0068866_10156435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Boseaceae → Bosea → unclassified Bosea → Bosea sp. BIWAKO-01	1325	Open in IMG/M
3300005841\|Ga0068863_100135194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2355	Open in IMG/M
3300005841\|Ga0068863_102279571	Not Available	551	Open in IMG/M
3300005842\|Ga0068858_100729901	Not Available	965	Open in IMG/M
3300005842\|Ga0068858_101673534	Not Available	628	Open in IMG/M
3300006028\|Ga0070717_10187279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1807	Open in IMG/M
3300006172\|Ga0075018_10442098	Not Available	668	Open in IMG/M
3300006178\|Ga0075367_11126078	Not Available	502	Open in IMG/M
3300006358\|Ga0068871_100129246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2140	Open in IMG/M
3300006854\|Ga0075425_100168701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2512	Open in IMG/M
3300006854\|Ga0075425_100916795	Not Available	1001	Open in IMG/M
3300006854\|Ga0075425_101186932	Not Available	868	Open in IMG/M
3300006854\|Ga0075425_102507685	Not Available	571	Open in IMG/M
3300006854\|Ga0075425_102525934	Not Available	568	Open in IMG/M
3300006871\|Ga0075434_101420248	Not Available	704	Open in IMG/M
3300006903\|Ga0075426_11273795	Not Available	558	Open in IMG/M
3300006904\|Ga0075424_100846308	Not Available	976	Open in IMG/M
3300006904\|Ga0075424_102336977	Not Available	561	Open in IMG/M
3300006931\|Ga0097620_101343939	Not Available	788	Open in IMG/M
3300007076\|Ga0075435_100212170	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300007076\|Ga0075435_101563647	Not Available	578	Open in IMG/M
3300009147\|Ga0114129_13056380	Not Available	548	Open in IMG/M
3300009148\|Ga0105243_10639867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1029	Open in IMG/M
3300009162\|Ga0075423_13045882	Not Available	513	Open in IMG/M
3300009176\|Ga0105242_12049550	Not Available	615	Open in IMG/M
3300009551\|Ga0105238_11599260	Not Available	682	Open in IMG/M
3300009553\|Ga0105249_10341796	Not Available	1513	Open in IMG/M
3300010375\|Ga0105239_10737955	Not Available	1127	Open in IMG/M
3300010397\|Ga0134124_11130242	Not Available	801	Open in IMG/M
3300010397\|Ga0134124_11654226	Not Available	672	Open in IMG/M
3300010397\|Ga0134124_11889156	Not Available	632	Open in IMG/M
3300011119\|Ga0105246_10099469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2114	Open in IMG/M
3300011119\|Ga0105246_11395703	Not Available	653	Open in IMG/M
3300012503\|Ga0157313_1042649	Not Available	563	Open in IMG/M
3300012957\|Ga0164303_10212990	Not Available	1079	Open in IMG/M
3300012984\|Ga0164309_10716859	Not Available	796	Open in IMG/M
3300012984\|Ga0164309_11697225	Not Available	542	Open in IMG/M
3300012987\|Ga0164307_10228687	All Organisms → cellular organisms → Bacteria → Proteobacteria	1285	Open in IMG/M
3300012989\|Ga0164305_10538065	Not Available	927	Open in IMG/M
3300012989\|Ga0164305_10616601	Not Available	874	Open in IMG/M
3300013296\|Ga0157374_12622040	Not Available	532	Open in IMG/M
3300013297\|Ga0157378_10846243	Not Available	943	Open in IMG/M
3300013306\|Ga0163162_10270719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1830	Open in IMG/M
3300013306\|Ga0163162_10432735	Not Available	1448	Open in IMG/M
3300013308\|Ga0157375_10092350	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3091	Open in IMG/M
3300014325\|Ga0163163_10788173	Not Available	1014	Open in IMG/M
3300014745\|Ga0157377_10314694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1038	Open in IMG/M
3300015371\|Ga0132258_10149267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5603	Open in IMG/M
3300015371\|Ga0132258_10350749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3649	Open in IMG/M
3300015371\|Ga0132258_10719367	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2514	Open in IMG/M
3300015371\|Ga0132258_11622176	Not Available	1632	Open in IMG/M
3300015372\|Ga0132256_100016228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6529	Open in IMG/M
3300015372\|Ga0132256_100915804	Not Available	993	Open in IMG/M
3300015372\|Ga0132256_102783429	Not Available	588	Open in IMG/M
3300015372\|Ga0132256_103338610	Not Available	540	Open in IMG/M
3300015373\|Ga0132257_101196896	Not Available	962	Open in IMG/M
3300015373\|Ga0132257_102149915	Not Available	722	Open in IMG/M
3300015373\|Ga0132257_102508696	Not Available	670	Open in IMG/M
3300015373\|Ga0132257_103405084	Not Available	579	Open in IMG/M
3300015373\|Ga0132257_103973474	Not Available	538	Open in IMG/M
3300015374\|Ga0132255_100037843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6179	Open in IMG/M
3300017792\|Ga0163161_10246963	Not Available	1390	Open in IMG/M
3300017792\|Ga0163161_10948746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	732	Open in IMG/M
3300025898\|Ga0207692_10692009	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300025899\|Ga0207642_11145934	Not Available	504	Open in IMG/M
3300025900\|Ga0207710_10754097	Not Available	511	Open in IMG/M
3300025904\|Ga0207647_10521625	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300025907\|Ga0207645_11023913	Not Available	559	Open in IMG/M
3300025927\|Ga0207687_10141549	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300025936\|Ga0207670_10458571	Not Available	1029	Open in IMG/M
3300025945\|Ga0207679_10524772	Not Available	1059	Open in IMG/M
3300025945\|Ga0207679_12028122	Not Available	523	Open in IMG/M
3300026023\|Ga0207677_10680170	Not Available	911	Open in IMG/M
3300026035\|Ga0207703_10060190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3104	Open in IMG/M
3300026067\|Ga0207678_10128837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2158	Open in IMG/M
3300026067\|Ga0207678_10312289	Not Available	1352	Open in IMG/M
3300026067\|Ga0207678_10766623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	851	Open in IMG/M
3300027915\|Ga0209069_10822271	Not Available	557	Open in IMG/M
3300028379\|Ga0268266_11300945	Not Available	702	Open in IMG/M
3300028381\|Ga0268264_12443717	Not Available	528	Open in IMG/M
3300031854\|Ga0310904_10018427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3017	Open in IMG/M
3300031944\|Ga0310884_10849578	Not Available	561	Open in IMG/M
3300032003\|Ga0310897_10118460	Not Available	1076	Open in IMG/M
3300032012\|Ga0310902_10161175	Not Available	1281	Open in IMG/M
3300032179\|Ga0310889_10612611	Not Available	562	Open in IMG/M
3300032205\|Ga0307472_100104325	Not Available	1960	Open in IMG/M
3300034819\|Ga0373958_0163609	Not Available	564	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	69.23%
Environmental	Environmental	30.77%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	69.23%
Terrestrial	Environmental → Terrestrial	28.85%
Aquatic	Environmental → Aquatic	1.92%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	38.46%
Soil	Environmental → Terrestrial → Soil	28.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	27.88%
Roots	Host-Associated → Plants → Roots	2.88%
Sediment	Environmental → Aquatic → Sediment	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.46%
Loam	Environmental → Terrestrial → Soil → Loam	9.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	9.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.92%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	9.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.50%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	9.62%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	3.85%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.96%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.96%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2)	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012503	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_R	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0935.00002210	2162886013	Switchgrass Rhizosphere	MGMIMANLDFCTTPFVEFDDTKIFGTADTVANFAKVAGDDASLQRKL
INPhiseqgaiiFebDRAFT_1014968762	3300000364	Soil	MANLDFXTTPFXXFNDTKIFGTADTVAHFAKVFDGKASLQ
F14TC_1001406783	3300000559	Soil	MSAIDYATPFVEFNDTKIFGTADTSAHFAKAFDNRASLQRTLSALQRGPV
Ga0062595_1001004093	3300004479	Soil	MTNLDFCTTPFVEFDDTKIFGTADTVANFAKVAGDDASLQRKLSA
Ga0062595_1010181442	3300004479	Soil	MANLDFCTTPFTEFDDTKIFGTSDTAASFAKVVGDDASLQRKLSALQ
Ga0062594_1012004391	3300005093	Soil	MANLDFCTTPFVEFDDTKIFGTADTVANFAKVAGDDASLQRKLSALQRGPVRFY
Ga0070683_1005722951	3300005329	Corn Rhizosphere	MANLDFSTTPFADFAYTKIFGTPDTAAHFAKVFGDNASLQRALSALQRGPALFFRDNVIAFD
Ga0068868_1004308251	3300005338	Miscanthus Rhizosphere	MANLDFSTTPFADFAYTKIFGTPDTAAHFAKVFGDNASLQRALSVLQRGPAYFYRDNVIAFDEDVA
Ga0068868_1006150973	3300005338	Miscanthus Rhizosphere	MANLDFRTTPVVEFDDTKIFGTADTAANFAKVVGDDASLQRKLSALQRGPVRFYQNN
Ga0070673_1007279152	3300005364	Switchgrass Rhizosphere	MANLDFSTTPFVEFENTKIFGTADTVANFAKLVGDDASLQRK
Ga0070709_105921673	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MANLDVCTAPFVEFDDTKIFGTAETAANFAKVAGDDVSLQRKLSALQRGP
Ga0070709_113714651	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MANLDFSTTPVVEFDDTKIFGTADSAANFAKVVGDDASLQRKLSALQRGPVRFYQNNVIA
Ga0070713_1021038571	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MANLDFCTTPFVEFDDTKIFGTADTVANFAKVAGDDASLQRKLSA
Ga0070711_1007343471	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGMIMANLDFCTTPFVEFDDTKIFGTADTVANFAKVAGDDAS
Ga0070711_1008575572	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MANLDFYSTPFVDFNHTKIFGTADTVAHFARVFGEDAPLQRTLSALQRGPVRFYRDN
Ga0070665_1017389712	3300005548	Switchgrass Rhizosphere	MANLDFCTAPVIEFDDTKIFGTADSAANFAKVIGNDASLQRKLSALQRGP
Ga0068854_1022289381	3300005578	Corn Rhizosphere	MANLDFYTTPFVDFNYTKIFGTADTAAHFAKVFGDDASLQRALSSLQREEGR
Ga0068866_101564351	3300005718	Miscanthus Rhizosphere	MANSDFYTTPFVEFNDTKIFGTADTAAHFAKVFGDDASLQRTLSALQRGPVSFYRDNVIA
Ga0068863_1001351941	3300005841	Switchgrass Rhizosphere	MANLDFSTTPVVEFENTKIFGTADTVVNFAKVVGDDASLQRKLSALQRGPVRFYQNNVIA
Ga0068863_1022795711	3300005841	Switchgrass Rhizosphere	MANLAFYTTPSIEINETKIFGTADTAAHFAKVFGDDASLQRTLSALQRGPVRFY
Ga0068858_1007299011	3300005842	Switchgrass Rhizosphere	MANLDFCTTPVVEFDDTKIFGTAETAANFAKVAGDDTSLQRKLSALQRGPVRFYQNNVIALNEDVAD
Ga0068858_1016735341	3300005842	Switchgrass Rhizosphere	MANLAFYTTPSIEINETKIFGTTDTAAHFAKVFGDNASLQRSLSALQRGPVRFYRDNVIAFDDDVADYL
Ga0070717_101872793	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MANLDFSTTPVVEFDDTKIFGTADTSANFAKVVGDDASLQRKLSALQRGPVRFYQNN
Ga0075018_104420981	3300006172	Watersheds	MANLDFSSTPFADFAYTKIFGTPDTAAHFAKVFGDNASLQRALSALQRGPAHFYRD
Ga0075367_111260781	3300006178	Populus Endosphere	MANSDFYTTPFVEFNDTKIFGTADTAAHFAKVFGDDASLQRTLSALQRGPVRFYRDNVIALDEDVADY
Ga0068871_1001292463	3300006358	Miscanthus Rhizosphere	MANLDFCTTPVIEFDDTKIFGTADSAANFAKVIGNDASLQRKLSALQRGPVRFYQNNVIA
Ga0075425_1001687011	3300006854	Populus Rhizosphere	MADLDFCTTPFLEFDDTKIFGTADTAANFAKVVGDDASLQRKLSALQRGPVRFYQNNVIA
Ga0075425_1009167951	3300006854	Populus Rhizosphere	MANLDFCTAPFAESNDTKIFGTADTAAHFAKVFDGNATLQRTLSALQ
Ga0075425_1011869322	3300006854	Populus Rhizosphere	MANVDFYTAPSIEFNDTKIFGTADTAAHFVKMFDGNASLQRTLSALQRGPVRFYRDQVIALD
Ga0075425_1025076851	3300006854	Populus Rhizosphere	MANLDFSTTPFADFAYTKIFGTPDTAAHFAKVFGDNASLQRALSALQRGPALF
Ga0075425_1025259341	3300006854	Populus Rhizosphere	MANLDFSTTPVVEFENTKIFGTADTVANFAKVVGDDASLQRKLSALQRGPVRFYQNNVIA
Ga0075434_1014202481	3300006871	Populus Rhizosphere	MANLDFSTTPVVEFENTKIFGTADTVANFAKVVGDDASLQRKLS
Ga0075426_112737951	3300006903	Populus Rhizosphere	MANLAFYTTPSIEINETKIFGTTDTAAHFAKVFGDNASLQRSLSALQRGPVRFYRDNVIAFD
Ga0075424_1008463081	3300006904	Populus Rhizosphere	MGMIMANLDFCTTPFVEFDDTKIFGTADTVANFAKVAGDDASLQRKLSALQRGPVRFYQNNVIALNEDVAD
Ga0075424_1023369771	3300006904	Populus Rhizosphere	MSAIDYATPFVEFNDTKIFGTADTSAHFAKAFDNRASLQRTLSALQRGPVRFYRDNVIALDEDIAAYLLF
Ga0097620_1013439391	3300006931	Switchgrass Rhizosphere	MANLDFCTAPFAESNDTKIFGTADTAAHFAKVFDGNATLQRTLSALQRG
Ga0075435_1002121701	3300007076	Populus Rhizosphere	MANLAFYTTPSIEINETKIFGTTDTAAHFAKVFGDNASLQRSLSA
Ga0075435_1015636471	3300007076	Populus Rhizosphere	MANVDFYTAPSIEFNDTKIFGTADTAAHFVKMFDGNASLQRTLSALQRGPVRFYRDQVIALDED
Ga0114129_130563802	3300009147	Populus Rhizosphere	MANLDFYTTPLDVNDTKIFGTADTAAHFAKVAGDNASLQRILSALQRGPVHFYRNNVIAL
Ga0105243_106398673	3300009148	Miscanthus Rhizosphere	MANLDFSTTPFADFAYTKIFGTPDTAAHFAKVFGD
Ga0075423_130458821	3300009162	Populus Rhizosphere	MANLDFRTTPVVEFDDTKIFGTADTAANFAKVVGDDASLQRKLSALQRGPV
Ga0105242_120495501	3300009176	Miscanthus Rhizosphere	MGMIMANLDFCTTPFVEFDDTKIFGTADTVANFAKVAGDDASLQRKLSALQRGPVRFYQN
Ga0105238_115992603	3300009551	Corn Rhizosphere	MANLDFYTAPFVEFNDTKIFGTADSAAHFAKAFEGNASLQRTLSALQRG
Ga0105249_103417962	3300009553	Switchgrass Rhizosphere	MMANLDFCTTPFVEFDDTKIFGTADTAANFAKVVGDD
Ga0105239_107379551	3300010375	Corn Rhizosphere	MGMIMANLDFCTTPFVEFDDTKIFGTADTVANFAKVAGDDASLQRKLSALQRGPVRFYQNNVI
Ga0134124_111302422	3300010397	Terrestrial Soil	MANLDFCTAPFAESNDTKIFGTADTAAHFAKVFDGNATLQRTLSALQRGPVRFYQDSVIA
Ga0134124_116542261	3300010397	Terrestrial Soil	MMANLDFCTTPFVEFDDTKIFGTADTAANFAKVVGDDASLQRKLSALQRGPV
Ga0134124_118891562	3300010397	Terrestrial Soil	MANLDFRTTPVVEFDDTKIFGTADTAANFAKVVGDDASLQRK
Ga0105246_100994691	3300011119	Miscanthus Rhizosphere	MANLDFCTTPVVEFDDTKIFGTAETAANFAKVAGDDTSLQRKLS
Ga0105246_113957031	3300011119	Miscanthus Rhizosphere	MANLDFYTTPFVELNDTKIFGTADTAAHFAKVFDGNPSLQRTLSALQRGPVRFYRDQV
Ga0157313_10426491	3300012503	Arabidopsis Rhizosphere	MANLDFYTTPFVEFNDTKIFGTADTAAHFAKMFVGNASLQRTLSALQRGPVRF
Ga0164303_102129901	3300012957	Soil	MANLDFSTTPVVEFENTKIFGTADTVANFAKLVGDDASLQRKLSVLQRGPVRFYQNNVIALNEDVADHLMF
Ga0164309_107168591	3300012984	Soil	MANLDFCTTPVIEFDDTKIFGTADSAANFAKVIGNDASLQRK
Ga0164309_116972252	3300012984	Soil	MANLDFYTTPFVDFNYTKIFGTADTAAHFAKVFGDDASLQRALSSL
Ga0164307_102286871	3300012987	Soil	MTNLDFCATPFVEFNDTKIFGTAETAANFAKVVGDDASLQRKLSALQRGPVRFYQNNVIALNEDVAD
Ga0164305_105380651	3300012989	Soil	MGMIMANLDFCTTPFVEFDETKIFGTADTAASFAKLVGDDASLQRKLSALQRGP
Ga0164305_106166011	3300012989	Soil	MANLDFNSTPFVDFNYTKIFGTADTAAHFAKVFGDDAPLQRTLSALQRGPVSFYR
Ga0157374_126220403	3300013296	Miscanthus Rhizosphere	MTNLDFCTTPVVEFDDTKIFGTADTAANFAKVVGDDASLQRKLSAL
Ga0157378_108462431	3300013297	Miscanthus Rhizosphere	MANLDFCTAPFAESNDTKIFGTADTAAHFAKVFDGNATLQRTL
Ga0163162_102707191	3300013306	Switchgrass Rhizosphere	MANLDFSTTPFADFAYTKIFGTPDTAAHFAKVFGDNAS
Ga0163162_104327353	3300013306	Switchgrass Rhizosphere	MANLDFSTTPVVEFENTKIFGTADTVANFAKLVGDDASLQRKLSVLQRGPVRFYQNNVI
Ga0157375_100923506	3300013308	Miscanthus Rhizosphere	MANLDVCTAPFVEFDDTKIFGTAETAANFAKVAGDDVS
Ga0163163_107881731	3300014325	Switchgrass Rhizosphere	MANVDFYTAPSIEFNDTKIFGTADTAAHFVKMFDGNASLQRTLSALQRGPVRFYRDQVIA
Ga0157377_103146941	3300014745	Miscanthus Rhizosphere	MANLDFSTTPFADFAYTKIFGTPDTAAHFAKVFGDNASLQRALSVLQRG
Ga0132258_101492671	3300015371	Arabidopsis Rhizosphere	MANLEFYTTPSIEFNETKIFGTPDTAAYFAKMFVGNASLQRTLSALQRGPVRFYRDQVIALDEDVDKY
Ga0132258_103507491	3300015371	Arabidopsis Rhizosphere	MANLDFYTTPFVEFNDTKIFGTADTAAHFAKMFVGNASLQRTLSALQRGPVRFYRDQVIALDEDVDKY
Ga0132258_107193671	3300015371	Arabidopsis Rhizosphere	MANLDFYSTPFVDFNYTKIFGTADSVAHFAKVFGDDAPLQRT
Ga0132258_116221761	3300015371	Arabidopsis Rhizosphere	MNGMTMANLDFCTTPFAEFEDTKIFGTADTAANFAKVVG
Ga0132256_1000162289	3300015372	Arabidopsis Rhizosphere	MANLDFYTTPFVEFNDTKIFGTADTAAHFAKMFVGNASLQRTLSALQRGPVRFYRDQVIALDEDVD
Ga0132256_1009158041	3300015372	Arabidopsis Rhizosphere	MANLDFSSAPFADFSYTKIFGTPDTAAHFAEVCGDNASLQRALSALQRGPALFYRD
Ga0132256_1027834291	3300015372	Arabidopsis Rhizosphere	MANLDFYTTPSIEISETKIFGTADTAAHFAKVFDGNASLQRTLSALQRGPARFYRDQVIALDE
Ga0132256_1033386101	3300015372	Arabidopsis Rhizosphere	MNGMTMANLDFCTTPFAEFEDTKIFGTADTAANFAKVVGDDASLQRKLSALQRGPVRFYQNNIIALN
Ga0132257_1011968962	3300015373	Arabidopsis Rhizosphere	MANLEFYTTPSIEFNETKIFGTPDTAAYFAKMFVGNASLQRTLSALQRGPVRFYRDQVIALDEDVDK
Ga0132257_1021499151	3300015373	Arabidopsis Rhizosphere	MANLDFATTPFVEFEDTKIFGTADTVANFAKLVGDDASLQRKL
Ga0132257_1025086962	3300015373	Arabidopsis Rhizosphere	MANLDFRTTPVAEFDDTKIFGTADSAANFAKVVGDDAPLQRKLSALQRGPVRFYQNNVIALNEDVAD
Ga0132257_1034050841	3300015373	Arabidopsis Rhizosphere	MANLDFATTPFVEFENTKIFGTADTAANLAKVVGDDASLQREL
Ga0132257_1039734742	3300015373	Arabidopsis Rhizosphere	MANLDFYATPSIEINETKIFGTADTAAHFAKVFGDDASLQRTLSALERGPVRFYRDEVIALDEGVAGYL
Ga0132255_1000378439	3300015374	Arabidopsis Rhizosphere	MANLDFYTTPFVEFNDTKIFGTADTAAHFAKMFVGNA
Ga0163161_102469632	3300017792	Switchgrass Rhizosphere	MANLDFSTTPVVEFENTKIFGTADTVVNFAKVVGDDASLQRKLSALQRGPVRFYQNNVIALNEDAADHLMF
Ga0163161_109487463	3300017792	Switchgrass Rhizosphere	MANLDFSTTPFADFAYTKIFGTPDTAAHFAKVFGDNASLQRALSALQRG
Ga0207692_106920092	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MANLDFYSTPFVDFNHTKIFGTADTVAHFARVFGEDAPLQGTLSALQRGPVRFYRDNVIALDVMF
Ga0207642_111459341	3300025899	Miscanthus Rhizosphere	MANSDFYTTPFVEFNDTKIFGTADTAAHFAKVFGDDASLQRTLSALQRGPVSFYRDNVIALDEDVADY
Ga0207710_107540971	3300025900	Switchgrass Rhizosphere	MANSDFYTTPFVEFNDTKIFGTADTAAHFAKVFGDDASL
Ga0207647_105216251	3300025904	Corn Rhizosphere	MANLDFRTTPVVEFDDTKIFGTADTAANFAKVVGDDASLQR
Ga0207645_110239133	3300025907	Miscanthus Rhizosphere	MANLDFSTTPFADFAYTKIFGTPDTAAHFAKVFGDN
Ga0207687_101415491	3300025927	Miscanthus Rhizosphere	MANLAFYTTPSIEINETKIFGTTDTAAHFAKVFGDNASLQRSLSALQ
Ga0207670_104585711	3300025936	Switchgrass Rhizosphere	MANLDFSTTPFVEFENTKIFGTADTVANFAKLVGDDASLHKKLSVLQRGPVRFYQNNVI
Ga0207679_105247721	3300025945	Corn Rhizosphere	MANLDFRTTPVVEFDDTKIFGTADTAANFAKVVGDDASLQRKLSALQRGPVRFYQNNVIA
Ga0207679_120281222	3300025945	Corn Rhizosphere	MANLAFYTTPSIEINETKIFGTTDTAAHFAKVFGDNASL
Ga0207677_106801701	3300026023	Miscanthus Rhizosphere	MANLDFSTTPFVEFENTKIFGTADTVANFAKLVGDDAS
Ga0207703_100601901	3300026035	Switchgrass Rhizosphere	MANLDVCTAPFVEFDDTKIFGTAETAANFAKVAGDDVSLQR
Ga0207678_101288371	3300026067	Corn Rhizosphere	MANLDFSTTPVVEFDDTKIFGTADSAANFAKVVGDDASLQRKLSAL
Ga0207678_103122891	3300026067	Corn Rhizosphere	MANLDFCTAPFAESNDTKIFGTADTAAHFAKVFDGNATLQRTLS
Ga0207678_107666233	3300026067	Corn Rhizosphere	MANLDVCTAPFVEFDDTKIFGTAETAANFAKVAGDDVSLQRKLSALQRGPVRFYQNNV
Ga0209069_108222711	3300027915	Watersheds	MANLDFSSTPFADFAYTKIFGTPDTAAHFAKVFGDNASLQRALSALQRGPAHF
Ga0268266_113009452	3300028379	Switchgrass Rhizosphere	MANLDFCTAPVIEFDDTKIFGTADSAANFAKVIGNDASLQRKLSALQRGPVRFYQNNVIALNE
Ga0268264_124437172	3300028381	Switchgrass Rhizosphere	MANLDFSSTPFADFAYTKIFGTPDTAAHFAKVFGDNASLQRALSALQRGPALF
Ga0310904_100184271	3300031854	Soil	MANLDFYTTPSIEINETKIFGTADTAAHFAKVFGDDASLQRTLSALQRGPVRFYRDEVIALDEGVAG
Ga0310884_108495782	3300031944	Soil	MANLDFCTTPFAEFNDTKIFGTADTVAHFAKVFDGKASLQRTLSALQRGP
Ga0310897_101184601	3300032003	Soil	MANVDFYTAPFVEFNDTKIFGTADTAAHFAKMFDGNASLQR
Ga0310902_101611752	3300032012	Soil	MANVDFYTAPFVEFNDTKIFGTADTAAHFAKMFDGNASLQRNLSALQLG
Ga0310889_106126112	3300032179	Soil	MANVDFYTAPFVEFNDTKIFGTADTAAHFAKMFDGNASLQRNLSALQLGPVRFYRDQVIALD
Ga0307472_1001043254	3300032205	Hardwood Forest Soil	MANLDFCTAPFAESNDTKIFGTADTAAHFAKVFDGNATLQRTLSALQRGPVRFYQ
Ga0373958_0163609_381_563	3300034819	Rhizosphere Soil	MANLDFYTTPFVEINDTKIFGTADTAAHFAKVFDGNASLQRTLSALQRGPTRFYRDQVIA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.25
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.25
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097973

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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