Metagenome Family F097960

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097960
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	86 residues
Representative Sequence	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLL
Number of Associated Samples	80
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.04 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	100.00 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (57.692 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (44.231 % of family members)
Environment Ontology (ENVO)	Unclassified (67.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.808 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.04% β-sheet: 0.00% Coil/Unstructured: 41.96%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00440	TetR_N	26.92
PF03466	LysR_substrate	9.62
PF04392	ABC_sub_bind	2.88
PF08281	Sigma70_r4_2	1.92
PF12680	SnoaL_2	1.92
PF07366	SnoaL	1.92
PF13181	TPR_8	0.96
PF00126	HTH_1	0.96
PF04542	Sigma70_r2	0.96
PF00300	His_Phos_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.88
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.96
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.96
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.96
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	57.69 %
Unclassified	root	N/A	42.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	57.69 %
Unclassified	root	N/A	42.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	57.69 %
Unclassified	root	N/A	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.88 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.08 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.88 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13.46 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	9.62 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.88 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.88 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.96 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.96 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Alloacidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium	2.88 %
Reticulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	2.88 %
Reticulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	42.31 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	8.65 %
Alloacidobacterium dinghuense	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	2.88 %
Reticulibacter mediterranei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	0.96 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.96 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005171\|Ga0066677_10546063	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005332\|Ga0066388_104723893	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300005332\|Ga0066388_105102952	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005332\|Ga0066388_105583839	Not Available	637	Open in IMG/M
3300005764\|Ga0066903_100614508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1888	Open in IMG/M
3300005764\|Ga0066903_104242311	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300005764\|Ga0066903_106733313	Not Available	597	Open in IMG/M
3300005764\|Ga0066903_108359852	Not Available	529	Open in IMG/M
3300005764\|Ga0066903_108500108	Not Available	523	Open in IMG/M
3300006032\|Ga0066696_10843112	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300006172\|Ga0075018_10722503	Not Available	540	Open in IMG/M
3300009792\|Ga0126374_10078693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1794	Open in IMG/M
3300009792\|Ga0126374_10984071	Not Available	660	Open in IMG/M
3300010046\|Ga0126384_12288488	Not Available	521	Open in IMG/M
3300010048\|Ga0126373_10378881	Not Available	1434	Open in IMG/M
3300010358\|Ga0126370_10210702	All Organisms → cellular organisms → Bacteria → Proteobacteria	1476	Open in IMG/M
3300010366\|Ga0126379_10298523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1615	Open in IMG/M
3300010366\|Ga0126379_12542955	Not Available	610	Open in IMG/M
3300010376\|Ga0126381_100639299	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1517	Open in IMG/M
3300010376\|Ga0126381_104253858	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300010376\|Ga0126381_105075229	Not Available	504	Open in IMG/M
3300010398\|Ga0126383_12405182	Not Available	612	Open in IMG/M
3300012971\|Ga0126369_12195672	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300016270\|Ga0182036_10106679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1916	Open in IMG/M
3300016270\|Ga0182036_11751662	Not Available	525	Open in IMG/M
3300016294\|Ga0182041_10506018	All Organisms → cellular organisms → Bacteria	1048	Open in IMG/M
3300016294\|Ga0182041_11021933	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300016294\|Ga0182041_11343450	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300016319\|Ga0182033_10602167	Not Available	955	Open in IMG/M
3300016357\|Ga0182032_11302468	Not Available	627	Open in IMG/M
3300016371\|Ga0182034_10382330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1151	Open in IMG/M
3300016387\|Ga0182040_11927994	Not Available	507	Open in IMG/M
3300016404\|Ga0182037_10445468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1076	Open in IMG/M
3300016404\|Ga0182037_10964672	All Organisms → cellular organisms → Bacteria	742	Open in IMG/M
3300016404\|Ga0182037_11307782	Not Available	639	Open in IMG/M
3300016404\|Ga0182037_11615004	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300016422\|Ga0182039_11331007	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	651	Open in IMG/M
3300017970\|Ga0187783_11217203	Not Available	542	Open in IMG/M
3300018062\|Ga0187784_10963502	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300018090\|Ga0187770_11677159	Not Available	519	Open in IMG/M
3300021407\|Ga0210383_11435030	Not Available	573	Open in IMG/M
3300021476\|Ga0187846_10148969	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300021560\|Ga0126371_12872349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Reticulibacteraceae → Reticulibacter → Reticulibacter mediterranei	584	Open in IMG/M
3300026817\|Ga0207775_107820	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300026859\|Ga0207859_1017805	Not Available	617	Open in IMG/M
3300026981\|Ga0207822_1016813	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300026983\|Ga0207856_1032587	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300031544\|Ga0318534_10447656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	740	Open in IMG/M
3300031561\|Ga0318528_10453743	Not Available	688	Open in IMG/M
3300031572\|Ga0318515_10222386	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300031572\|Ga0318515_10384078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	752	Open in IMG/M
3300031573\|Ga0310915_10314989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1106	Open in IMG/M
3300031640\|Ga0318555_10060815	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1937	Open in IMG/M
3300031668\|Ga0318542_10073550	All Organisms → cellular organisms → Bacteria	1604	Open in IMG/M
3300031681\|Ga0318572_10158158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1311	Open in IMG/M
3300031682\|Ga0318560_10068187	All Organisms → cellular organisms → Bacteria → Proteobacteria	1790	Open in IMG/M
3300031713\|Ga0318496_10617707	Not Available	599	Open in IMG/M
3300031719\|Ga0306917_10693091	All Organisms → cellular organisms → Bacteria → Proteobacteria	800	Open in IMG/M
3300031723\|Ga0318493_10119967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1337	Open in IMG/M
3300031736\|Ga0318501_10637056	Not Available	586	Open in IMG/M
3300031751\|Ga0318494_10276303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	966	Open in IMG/M
3300031765\|Ga0318554_10150630	All Organisms → cellular organisms → Bacteria	1320	Open in IMG/M
3300031768\|Ga0318509_10585973	Not Available	621	Open in IMG/M
3300031771\|Ga0318546_10249433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1221	Open in IMG/M
3300031778\|Ga0318498_10146795	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1073	Open in IMG/M
3300031780\|Ga0318508_1052286	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300031781\|Ga0318547_10478616	All Organisms → cellular organisms → Bacteria → Proteobacteria	768	Open in IMG/M
3300031781\|Ga0318547_10979212	Not Available	528	Open in IMG/M
3300031782\|Ga0318552_10624096	Not Available	550	Open in IMG/M
3300031792\|Ga0318529_10142306	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300031799\|Ga0318565_10095531	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Alloacidobacterium → Alloacidobacterium dinghuense	1423	Open in IMG/M
3300031805\|Ga0318497_10137436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1332	Open in IMG/M
3300031833\|Ga0310917_10244187	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300031846\|Ga0318512_10052016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1831	Open in IMG/M
3300031879\|Ga0306919_11522082	Not Available	503	Open in IMG/M
3300031880\|Ga0318544_10372132	Not Available	555	Open in IMG/M
3300031890\|Ga0306925_11238025	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300031893\|Ga0318536_10335521	Not Available	766	Open in IMG/M
3300031893\|Ga0318536_10702718	Not Available	503	Open in IMG/M
3300031894\|Ga0318522_10353181	Not Available	557	Open in IMG/M
3300031897\|Ga0318520_10214455	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300031910\|Ga0306923_10697704	Not Available	1130	Open in IMG/M
3300031910\|Ga0306923_12072376	Not Available	575	Open in IMG/M
3300031912\|Ga0306921_11562455	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300031941\|Ga0310912_10489938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	958	Open in IMG/M
3300031942\|Ga0310916_10576342	Not Available	957	Open in IMG/M
3300031942\|Ga0310916_10894230	Not Available	745	Open in IMG/M
3300031942\|Ga0310916_11426400	Not Available	566	Open in IMG/M
3300031954\|Ga0306926_11085949	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300032010\|Ga0318569_10399786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	640	Open in IMG/M
3300032025\|Ga0318507_10060963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1508	Open in IMG/M
3300032039\|Ga0318559_10143980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1079	Open in IMG/M
3300032041\|Ga0318549_10039680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1901	Open in IMG/M
3300032043\|Ga0318556_10237597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	950	Open in IMG/M
3300032059\|Ga0318533_10699046	Not Available	744	Open in IMG/M
3300032064\|Ga0318510_10106435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1072	Open in IMG/M
3300032065\|Ga0318513_10051313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1847	Open in IMG/M
3300032068\|Ga0318553_10463639	Not Available	664	Open in IMG/M
3300032076\|Ga0306924_10905075	Not Available	976	Open in IMG/M
3300032076\|Ga0306924_11385243	Not Available	751	Open in IMG/M
3300032076\|Ga0306924_11565000	Not Available	696	Open in IMG/M
3300032160\|Ga0311301_10724135	Not Available	1391	Open in IMG/M
3300032261\|Ga0306920_102546203	Not Available	703	Open in IMG/M
3300033289\|Ga0310914_11785063	Not Available	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.04%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.08%
Sediment	Environmental → Aquatic → Sediment	0.96%
Cave	Environmental → Terrestrial → Cave	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.69%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	68.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.54%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	44.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	24.04%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	11.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026817	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 17 (SPAdes)	Environmental	Open in IMG/M
3300026859	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 25 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300026983	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 21 (SPAdes)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066677_105460631	3300005171	Soil	MTLILLQAIIQSVTSTLHWIGVSVGIRALPGEKSRRRRWIIGSAAVQAVWLVGITLLAAYDVFRIDAPGIPIALLTTLAAGYLLLLSRTFRAIIGGIPQHWL
Ga0066388_1047238931	3300005332	Tropical Forest Soil	MTLILLQTIIQSISSTLYWVGLYAGIRALPGKDSTRLRWIAGSAVVLAAWLIGIVLLASNGFFRTDVPLIPAALLATLAAGYLLLLWPAFRAIIGGIPPHWLIDI
Ga0066388_1051029522	3300005332	Tropical Forest Soil	MTLILLQAIIQSIVATLTWIGLYAGLRALPGEESRRLRWTVGSAAVMAIWLVGVMLLGANDAFANALGVPIALLTTLAA
Ga0066388_1055838391	3300005332	Tropical Forest Soil	MTLILLQAIIQSISSTLYWIGLYVGIRALPGDKSRRLLWKVGSAAVLAAWLIGVMLLAANDVFRADAPRIPIALLTTLAAGYLLLFSRTFRAIISGIPQHWLIGIQT
Ga0066903_1006145081	3300005764	Tropical Forest Soil	MTLILLQAIIQSIATTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDA
Ga0066903_1042423113	3300005764	Tropical Forest Soil	MTVILLQTITQSISSTLYWIGLYVGIRALPGERSRRLLWTAGSAAVLVVWLVGVMLLAANDVFRTEAPRIPAALLTTLAAGYLLLFSRTFRGIISGIPQHWLIGIQTFR
Ga0066903_1067333131	3300005764	Tropical Forest Soil	MTLILLQVIIQSIASTLYWIGLYVSIRVLPGEKSRRLRWIVGSAAVLVVWLVAVMLLAANDVFRIDAPRIPVALLTTLAAGYLLLFSRTFRAIVSGIPQHWLIGIQ
Ga0066903_1083598522	3300005764	Tropical Forest Soil	MTLILLQAMIQSISSTLYWIGLYVGIRALPGEKSRRLRWAIGSAAVLVVWLVSVMLLAANGVFRSDAPRIP
Ga0066903_1085001082	3300005764	Tropical Forest Soil	MTLILLQAMIQSIASTLYWIGLYVGIRALPGEKSRRLRWAVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPVALLTTLA
Ga0066696_108431122	3300006032	Soil	MTLILLQAIIQSVTSTLHWIGVSVGIRALRGEESRRRRWIIGSAAAQAVWLVGIMLLAANDSFRIDGPGIPITLLTTLAAGYVLLLSRTFRAIIGGIPQHWLI
Ga0075018_107225032	3300006172	Watersheds	MTLILLQAIIPSVASTLYWIGLYVGIRALPGSRRLRWTVGSATVLVIWLVGVMPLAANDVFRIDAPRIP
Ga0126374_100786931	3300009792	Tropical Forest Soil	MTLILLQAVIQSIASTLYWIGLYVGIRALPGDKSRRLRWTVGSAAVLALWLVGVILLAAYDVFRADAPRIPIALLTTLAVGYSLLFSRTFRAIIG
Ga0126374_109840712	3300009792	Tropical Forest Soil	MTLILIQTIFQSIVSTLYWIGLYVGIRALPGEESRRLRWTVGSAAVLVVWFVGAMLLAANDVFRIDGPRIPVALLTTLAAGYLLLLSRTFRAIISGIPQHWLIG
Ga0126384_122884882	3300010046	Tropical Forest Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDVPRIPVALLTTLAAGYLLLLSRTFRAII
Ga0126373_103788813	3300010048	Tropical Forest Soil	MTLILLQAIIQSVASTLYWVGLYVGIRALPGEKSRRLRWTVGSAAVLVIWLVAVTLLAANDVFRAD
Ga0126370_102107023	3300010358	Tropical Forest Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVVLLAANDIFRTDGPGIPVALVTTLAAGYLLLLSRTFRAIISGIPQHWLIGIQTFRIL
Ga0126379_102985231	3300010366	Tropical Forest Soil	MTLILLQVIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPIALLTTLAVGYLLLLSRT
Ga0126379_125429552	3300010366	Tropical Forest Soil	MTLILLQAIIQSISSTLYWIGLYVGIRALPGDKSRRLLWKVGSAAVLAAWLIGVMLLAANDVFRADAPRIPIALLATLAAGYLLLFSRT
Ga0126381_1006392994	3300010376	Tropical Forest Soil	MTLILLQVIIQSITATLYWIALCIGIRALPGEESRRLRWTLGSAALLLAWLIVIMLLGANDVFRADSLRVPVTLLTTLAAGYLLLLSRTFRAIVSGIPQ
Ga0126381_1042538581	3300010376	Tropical Forest Soil	MTLSLLQTIIQSIASTLTWIGLYLGIRALPGGTSRRLRWIVGSAAVLVAWLVGVTLLGANDFFRTDAARVPLALLTTVAAGYVLLLSPTFRAIISGIPQQWLIGLQTFRILGGVFLVRYFQGTLS
Ga0126381_1050752292	3300010376	Tropical Forest Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLCWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAVGYLFLLSRTFRAIIS
Ga0126383_124051823	3300010398	Tropical Forest Soil	MTLILLQAVIQSIASTLYWIGLYVSIRVLPGEKSRRLRWIVGSAAVLVVWLVAVMLLAANDVFRIDAPRIPVALLTTLAAGYLLLFSRTFRAIVSGIPQHWLIGIQTF
Ga0126369_121956722	3300012971	Tropical Forest Soil	MQSIVSTLFWFGLYLGIRALPGEKSRRLRWTVGSAAVLVVWLVGVVLLAANDIFRTDGPGIPVALVTTLAAGYLLLLSRTFRAIISGIPQHWLIGIQTFRIL
Ga0182036_101066791	3300016270	Soil	MTLILLQVIIQSIASTLYWIGLYVGIRVLPGEKSRRLRWIVGSAAVLVVWLVAVMLLAANDVFRIDAPRIPVALLTTLAAGYLLL
Ga0182036_117516621	3300016270	Soil	MTLILLQTMIQSISSTLYWIGLYVGISALPGEKSRRLRWTVGSAAVLVVWLVSVMLLAANGVFRSDAPRIPVALVTTLAAGHLL
Ga0182041_105060181	3300016294	Soil	MTLILLQVIIQSISSTLYWIGLCVGIRALPGERSRRVRWAIGSAAVLVVWLVCVVLLAANGVFRTDAPRIPIALLTTLAAGYLLLFS
Ga0182041_110219331	3300016294	Soil	MTLILLQVIIQSISSTLYWIGLCVGIRALPGERSRRVRWTVGSAAVLVVWLVSVVLLAANGVFRTDAPRIPI
Ga0182041_113434503	3300016294	Soil	MTLILLQVIIQSIASTLYWIGLYVGISSLPGENSRRLRWAVGSAAVLAVWLVGLVLLAADDFFRTDGPR
Ga0182033_106021671	3300016319	Soil	MTLILLQAIIQSVASTLYWVGLYVGIRALPGERSRRLRWTLGSAAVLVVWLVGIMLLAANDVFRIDAP
Ga0182032_113024681	3300016357	Soil	MTLILLQVIIQSIGSTLYWIGLYVGIRALPGERSRRVRWAVGSAAVLVVWLVCVVLLAANGVFRTDVPRIPIALLTTLAAGYLLLFSGTFRAIISGIPQHW
Ga0182034_103823301	3300016371	Soil	MTLILLQVIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVAWLVGVMLLAANGAFRSDAPRIPIALATTLAAGYLLLLSRTFRAI
Ga0182040_119279942	3300016387	Soil	MTLILLQVIIQSIASTLYWIGLYVGIRVLPGEKSRRLRWIVGSAAVLVVWLVGVVLLAANGVFRTDVPRIPIALLTTLAAG
Ga0182037_104454682	3300016404	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRQLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRI
Ga0182037_109646722	3300016404	Soil	MTLILLQAIIQSISSTLYWIGLCVGIRALPGGKSRRLRWTIGSAAVLAIWLVGVMLLAANDVFRADAPRIPIALLTTLAAGYLLLFSRTFRAIIGGIPQ
Ga0182037_113077821	3300016404	Soil	MTLILLQVMIQSVASTLYWVGLYVGIRALPGEKSHRLRWTIGSAAVLVVWLVGVMLLAANDVFRIDAPGIPLALLTTLAAGYLL
Ga0182037_116150041	3300016404	Soil	MTLILLQVIIQSITATLYWIALYLGIRALPGDESRRLRWTLGSAAVLLVWLIGIMLVAANDVFRSDSLRVPATLLTTLAVGYLLL
Ga0182039_113310071	3300016422	Soil	MTLILFQLIIQSIASTLYWIGLYVGVRALPGEKSRRLRWIVGSAAVLVVWLVGVMLLAANDVFRTDGPRIPVALLTTLAAGYLLLFSRTFRAIIGSIPQHWLIVVQTFRI
Ga0187783_112172033	3300017970	Tropical Peatland	MTLILLQAMIQSIASTIYWVGLYVGIRALPGDKSRRLSWTIGSAALLVVWLVAVMLLAANGVFRPDAPRI
Ga0187784_109635022	3300018062	Tropical Peatland	MTLILLQAIIQSISSTLYWIGLYAGIRVLPGDNSRRVRWTIGSAVVLVAWLVGVMLLAANDAFRTDAPRIPAALLITL
Ga0187770_116771592	3300018090	Tropical Peatland	MTLILLQTIIQSVSSTLYWIGLYAGIRALPGDNSRRLRWIIGSAIVLVAWLVGAVLLAANDVFRADTPRIPIALSMTLAAGYLLLLSP
Ga0210383_114350302	3300021407	Soil	MTLALLQTIIQSVSSTLYWLGLSAGIRALPGERSRQRRWMTGSALVLAVWLIAIVLAAGNGFLDG
Ga0187846_101489693	3300021476	Biofilm	MTLILLQTIIQSVSSTLHWIGFYVGIRTLPGDKSRRLRWTLASAAVFAVWLVAIVLLAANDVFRTDAP
Ga0126371_128723491	3300021560	Tropical Forest Soil	MTLILLQAMIQSVASTLYWVGLYVGIRALPGEKSHRLRWTIGSTAVLMVWLVGVMLLAANDAFSVDAPGIPVGLLTTLAAGYLLLLSRTFRAIISGIPQHWLIGIQTFRILGGV
Ga0207775_1078201	3300026817	Tropical Forest Soil	MTLILLQAIIQSISSTLYWVGLYVGIRALPGEKSRRLRWTVGSTAVLVVWLVGIMLLAANDVFRTDASRIPVALLTTLAA
Ga0207859_10178051	3300026859	Tropical Forest Soil	MTLILLQAIIQSIASTLYWVGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLFLSQTFRAIISGIPQHWLIGIQTSDAGSFRPIGTNGFFPRGGERAV
Ga0207822_10168133	3300026981	Tropical Forest Soil	MTLILLQAIIQSISSTLYWVGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDASRIP
Ga0207856_10325871	3300026983	Tropical Forest Soil	MTLILLQAIIQSIASTLYWVGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPVALLT
Ga0318534_104476561	3300031544	Soil	MTLILLQVMIQSITSTLYWIGLYVGIRALPGERSRRLRWTVGSAAVLAAWLVGVVLLAGDDFFRTDGPRIP
Ga0318528_104537431	3300031561	Soil	MTLTLLLAIFQSIVSTLYGIGLYVGIRALPGEKSRRLRWTVGSAAVLVLWLVGVMLLAADDVFRIDGPGIPVALLTTLAAGYLLLLSRTFRAIISG
Ga0318515_102223863	3300031572	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAARIPVALLTTLAAGYLL
Ga0318515_103840781	3300031572	Soil	MTLILLQVIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVAWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGY
Ga0310915_103149891	3300031573	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLLLSRTFRAIIS
Ga0318555_100608155	3300031640	Soil	MTLTLLLAIFQSIVSTLYGIGLYVGIRALPGEKSRRLRWTVGSAAVLVLWLVGVMLLAADDVFRIDGLGIPVALLTTLAAGYLLLLSRTFRAIISGIPKHWLIGIQTFRIL
Ga0318542_100735501	3300031668	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTD
Ga0318572_101581581	3300031681	Soil	MTLILLQVIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVAWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLLSSR
Ga0318560_100681871	3300031682	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAARIPVALLTTLAAGYLLL
Ga0318496_106177073	3300031713	Soil	MTLILLQVIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVAWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLLSSRTFRAIISSIPQHWLIGIQ
Ga0306917_106930911	3300031719	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAARIPVALLTTLAAGYLLLLSGTFRAII
Ga0318493_101199675	3300031723	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSLRLRWTVGSAAVSVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLLLSRT
Ga0318501_106370563	3300031736	Soil	MTLILLQVMIQSVASTLYWVGLYVGIRALPGEKSHRLRWTIGSAAVLVVWLVGVMLLAANDVFRIDAPRI
Ga0318494_102763034	3300031751	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSLRLRWTFGSAAVSVVWLVGVMLLAANDVFRTDAPRIPV
Ga0318554_101506305	3300031765	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVSVVWLVGVMLLAANDVFRTDAPRIPVALLT
Ga0318509_105859733	3300031768	Soil	MTLTLLLAIFQSIVSTLYGIGLYVGIRALPGEKSRRLRWTVGSAAVLVLWLVGVMLLAADDVFRIDGLGIP
Ga0318546_102494334	3300031771	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLLLSRT
Ga0318498_101467954	3300031778	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSLRLRWTVGSAAVSVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLLLSRTFRAIISRI
Ga0318508_10522863	3300031780	Soil	MTLTLLLAIFQSIVSTLYGIGLYVGIRALPGEKSRRLRWTVGSAAVLVLWLVGVMLLAADDVFRIDGLG
Ga0318547_104786161	3300031781	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAARIPVALLTTLAAG
Ga0318547_109792122	3300031781	Soil	MTLILFQLIIQSIASTLYWIGLYVGVRALPGEKSRRLRWIVGSAAVLVVWLVGVMLLAANDVFRTDGPRIPVALLTTLAAGYLLLFSRTFRAIIS
Ga0318552_106240961	3300031782	Soil	MTLILLQAIIQSVASTLYWVGLYVGIRALPGERSRRLRWTLGSAAVLVVWLVGIMLLAANDVFRIDAPRIPVALLTTL
Ga0318529_101423063	3300031792	Soil	MTLTLLLAIFQSIVSTLYGIGLYVGIRALPDEKSRRLRWTVGSAAVLVLWLVGVMLLAADDVFRIDGLGIPVALLTTLAAGYLLLLS
Ga0318565_100955314	3300031799	Soil	MTLTLLLAIFQSIVSTLYGIGLYVGIRALPGEKSRRLRWTVGSAAVLVLWLVGVMLLAADDVFRIDGLGI
Ga0318497_101374363	3300031805	Soil	MTLILLQVIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVAWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYL
Ga0310917_102441874	3300031833	Soil	MTLTLLLAIFQSIVSTLYGIGLYVGIRALPGEKSRRLRWTVGSAAVLVLWLVGVMLLAADDVFRIDGLGIPVALL
Ga0318512_100520161	3300031846	Soil	MTLILFQLIIQSIASTLYWIGLYVGVRALPGEKSRRLRWIVGSAAVLVVWLVAVMLLAANDVFRIDAPRIPVALLTTLAAGYL
Ga0306919_115220822	3300031879	Soil	MTLILLQVMIQSVASTLYWVGLYVGIRALPGEKSHRLRWTIGSAAVLVVWLVGVMLLAANDAFRIDTPGIPVGLLTTLAAGYLLLLSRTFRAIISGIPQHWLIGIQTFRI
Ga0318544_103721322	3300031880	Soil	MTLILLQAIIQLIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRSDAPRIP
Ga0306925_112380252	3300031890	Soil	MTLTLLQAIVLSITATLYWIGLCIGIRALPGERSRRLRWTVGSAAVMMVWLVALMLLAANDVFSSDTSRVPVALLTT
Ga0318536_103355213	3300031893	Soil	MTLILLQVMIQSVASTLYWVGLYVGIRALPGEKSHRLRWTIGSAAVLVVWLVGVMLLAANDVFRIDAPRIPVALLTTLAAGYLLLLSPTFRAIIGSIP
Ga0318536_107027181	3300031893	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAARIPVALLTTLAAGYLLLLSGTFRAIISGIPQHWLIGI
Ga0318522_103531811	3300031894	Soil	MTLILLLAIFQSIVSTLYGIGLYVGIRALPGEKSRRLRWTVGSAAVLVLWLVGVMLLAADDVFRIDGLG
Ga0318520_102144553	3300031897	Soil	MTLILLLAIFQSIVSTLYGIGLYVGIRALPGEKSRRLRWTVGSAAVLVLWLVGVMLLAADDVFRIDGLGI
Ga0306923_106977043	3300031910	Soil	MTLILLQAIIQSVASTLYWVGLYVGIRALPGERSRRLRWTLGSAAVLVVWLVGIMLLAANDVFRIDAPRIPVALLTTLAAGYLLLLSPTFRAIIDD
Ga0306923_120723761	3300031910	Soil	MTLILLQTIIQSVGSTLYWVGLYVGIRALPGEKSFRLRWTVGSAAVLVVWLVGVMLLAANDVFRIDAPRIPVALLTTLAAGYLLLLSPTFRAIIGSIPQ
Ga0306921_115624553	3300031912	Soil	MTLILLQAIIQSISSTLYWIGLYVGIRTLPGDKSRQLRWAVGSAAVLVVWLVGVMLLAANDVFRPDTPRIPLALLTTLAAGYL
Ga0310912_104899383	3300031941	Soil	MTLILFQLIIQSIASTLYWIGLYVGVRALPGEKSRRLRWIVGSAAVLVVWLVGVMLLAANDVFRTDGPRIPVALLTTLAAGYLLLFSRTFRAIISGIPQHWLI
Ga0310916_105763423	3300031942	Soil	MTLILLQAIIQSISSTLYWIGLYVGIRTLPGDESRQLRWIVGSAAVLVVWLVGVMLLAANDVFRPDTPRIP
Ga0310916_108942301	3300031942	Soil	MTLILLQTIIQSVGSTLYWVGLYVGIRALPGEKSFRLRWTVGSAAVLVVWLVGVMLLAANDVFRIDAPRIPVALLTTLAAGYLLLLSRTFRAIIGGIPQLWLI
Ga0310916_114264003	3300031942	Soil	MTLILFQLIIQSIASTLYWIGLYVGVRALPGEKSRRLRWIVGSAAVLVVWLVGVMLLAANDVFRTDGPRIPVALLTTLAAGYLLLFSRTFRAIISG
Ga0306926_110859491	3300031954	Soil	MTLILLQTMIQSISSTLYWIGLYVGISALPGEKSRRLRWTVGSAAVLVVWLVSVMLLAANGIFRSDAPRIPVAL
Ga0318569_103997861	3300032010	Soil	MTLILLQVIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVAWLVGVMLLAANDVFRTDAPRI
Ga0318507_100609633	3300032025	Soil	MTLILLQVIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTLGSAAVLVAWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLLSSRTFRAIISSI
Ga0318559_101439804	3300032039	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSLRLRWTVGSAAVSVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLLL
Ga0318549_100396801	3300032041	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAARIPVA
Ga0318556_102375971	3300032043	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLL
Ga0318533_106990462	3300032059	Soil	MTLILLQVMIQSVASTLYWVGLYVGIRALPGEKSHRLRWTIGSAAVLVVWLVGVMLLAANDAFRIDTPGIPVG
Ga0318510_101064351	3300032064	Soil	MTLILLQAIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLLLSRTFRAIISGIPQHWLIGIQ
Ga0318513_100513134	3300032065	Soil	MTLILLQVIIQSIASTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVAWLVGVMLLAANDVFRTDAPRIPVALLTTLAA
Ga0318553_104636393	3300032068	Soil	MTLTLLLAIFQSIVSTLYGIGLYVGIRALPDEKSRRLRWTVGSAAVLVLWLVGVMLLAADDVFRIDGPGIPVALLTTLAAG
Ga0306924_109050751	3300032076	Soil	MTLILLQAIIQSISSTLYWIGLYVGIRTLPGDKSRQLRWAVGSAAVLVVWLVGVMLLAANDVFRPDTPRIPLELL
Ga0306924_113852431	3300032076	Soil	MTLILLQAIIQSISSTLYWIGLCVGIRVLPGNQSRRRRWAVGSAVVLLVSLVGVMLLAANDVFRPDTPR
Ga0306924_115650003	3300032076	Soil	MTLILLQAIIQSVASTLYWVGLYVGIRALPGERSRRLRWTLGSAAVLVVWLVGIMLLAANDVFRIDAPRIPVA
Ga0311301_107241352	3300032160	Peatlands Soil	MTLVLFQTIIQSVSSTLQWIGFHAGISTLPGSKSRQWRWTIGSALIFAVWFVGIVLLAADNVFRNDAPRIPIALLSTLAAGYLLLRSATF
Ga0306920_1025462031	3300032261	Soil	MTLILLQAMIQSITSTLYWIGLYVGIRALPGEKSRRLRWTVGSAAVLVVWLVGVMLLAANDVFRTDAPRIPVALLTTLAAGYLLLLSHTVRAIISGIPQHW
Ga0310914_117850632	3300033289	Soil	MTLILLQAIIQSISSTLYWIGLYVGIRTLPGDKSRQLRWAVGSAAVLVVWLVGVMLLAANDVFRPDTPRIPVALLATLAAGYLLLLSRTF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097960

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences