Metagenome Family F097929

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097929
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	58 residues
Representative Sequence	GLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYRFANSIRSELSAVSVRPLKEAA
Number of Associated Samples	73
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	12.50 %
% of genes near scaffold ends (potentially truncated)	88.46 %
% of genes from short scaffolds (< 2000 bps)	86.54 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.423 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.961 % of family members)
Environment Ontology (ENVO)	Unclassified (39.423 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.654 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.43% β-sheet: 2.38% Coil/Unstructured: 76.19%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01471	PG_binding_1	5.77
PF02627	CMD	5.77
PF00753	Lactamase_B	1.92
PF03466	LysR_substrate	0.96
PF09210	BE_C	0.96
PF00376	MerR	0.96
PF09828	Chrome_Resist	0.96
PF12762	DDE_Tnp_IS1595	0.96
PF09365	DUF2461	0.96
PF06067	DUF932	0.96
PF07485	DUF1529	0.96
PF04191	PEMT	0.96
PF00982	Glyco_transf_20	0.96
PF01494	FAD_binding_3	0.96
PF04107	GCS2	0.96
PF13565	HTH_32	0.96
PF06628	Catalase-rel	0.96
PF02754	CCG	0.96
PF13875	DUF4202	0.96
PF07228	SpoIIE	0.96
PF08281	Sigma70_r4_2	0.96
PF07694	5TM-5TMR_LYT	0.96
PF14833	NAD_binding_11	0.96
PF05368	NmrA	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	5.77
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	5.77
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.92
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	0.96
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	0.96
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.96
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.96
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.96
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.96
COG1543	Predicted glycosyl hydrolase, contains GH57 and DUF1957 domains	Carbohydrate transport and metabolism [G]	0.96
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	0.96
COG3275	Sensor histidine kinase, LytS/YehU family	Signal transduction mechanisms [T]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
All Organisms	root	All Organisms	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
cellular organisms	root	All Organisms → cellular organisms	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.69 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	1.92 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.92 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.92 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.96 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.96 %
Armatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.92 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.96 %
Armatimonadia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
Capsulimonadales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales	0.96 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	0.96 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.92 %
Capsulimonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae	0.96 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	0.96 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.92 %
Anaeromyxobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae	0.96 %
Capsulimonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas	0.96 %
Ktedonobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.92 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	0.96 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.96 %
Anaeromyxobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.92 %
unclassified Anaeromyxobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter	0.96 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	0.96 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.42 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1.92 %
Anaeromyxobacter sp. K	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. K	0.96 %
Capsulimonas corticalis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	0.96 %
Ktedonobacter racemifer	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	0.96 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.96 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320006\|FACEOR_FYWIORV02G41LP	Not Available	533	Open in IMG/M
2170459009\|GA8DASG01A31YZ	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Anaeromyxobacteraceae → Anaeromyxobacter → unclassified Anaeromyxobacter → Anaeromyxobacter sp. K	538	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101342456	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300000789\|JGI1027J11758_12462198	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300000789\|JGI1027J11758_12729730	Not Available	599	Open in IMG/M
3300001108\|JGI12647J13326_102545	Not Available	670	Open in IMG/M
3300002245\|JGIcombinedJ26739_100051421	All Organisms → cellular organisms → Bacteria	3752	Open in IMG/M
3300002245\|JGIcombinedJ26739_100115921	All Organisms → cellular organisms → Bacteria	2520	Open in IMG/M
3300002245\|JGIcombinedJ26739_101317202	Not Available	614	Open in IMG/M
3300002245\|JGIcombinedJ26739_101807182	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300002568\|C688J35102_118544381	All Organisms → cellular organisms → Bacteria → Proteobacteria	570	Open in IMG/M
3300002910\|JGI25615J43890_1009393	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300002910\|JGI25615J43890_1064339	Not Available	623	Open in IMG/M
3300003219\|JGI26341J46601_10006481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → Ktedonobacter → Ktedonobacter racemifer	3846	Open in IMG/M
3300003368\|JGI26340J50214_10004427	All Organisms → cellular organisms → Bacteria	4566	Open in IMG/M
3300004092\|Ga0062389_102570440	All Organisms → cellular organisms → Bacteria → Proteobacteria	676	Open in IMG/M
3300005171\|Ga0066677_10819093	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300005332\|Ga0066388_107178816	All Organisms → cellular organisms → Bacteria → Proteobacteria	560	Open in IMG/M
3300005435\|Ga0070714_101654783	Not Available	625	Open in IMG/M
3300005536\|Ga0070697_100956662	Not Available	761	Open in IMG/M
3300005921\|Ga0070766_10153643	All Organisms → cellular organisms → Bacteria → Proteobacteria	1411	Open in IMG/M
3300006173\|Ga0070716_100242719	All Organisms → cellular organisms → Bacteria → Proteobacteria	1222	Open in IMG/M
3300006175\|Ga0070712_101337603	Not Available	625	Open in IMG/M
3300006954\|Ga0079219_12244040	Not Available	526	Open in IMG/M
3300007265\|Ga0099794_10251431	Not Available	911	Open in IMG/M
3300012203\|Ga0137399_10016305	All Organisms → cellular organisms → Bacteria	4706	Open in IMG/M
3300012203\|Ga0137399_10059185	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2824	Open in IMG/M
3300012203\|Ga0137399_10735346	Not Available	831	Open in IMG/M
3300012203\|Ga0137399_11726534	Not Available	514	Open in IMG/M
3300012205\|Ga0137362_10197433	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300012205\|Ga0137362_10439249	Not Available	1130	Open in IMG/M
3300012205\|Ga0137362_10830894	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300012205\|Ga0137362_11171816	Not Available	652	Open in IMG/M
3300012208\|Ga0137376_10206051	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300012361\|Ga0137360_10692629	Not Available	875	Open in IMG/M
3300012361\|Ga0137360_11152757	Not Available	670	Open in IMG/M
3300012582\|Ga0137358_10566742	Not Available	763	Open in IMG/M
3300012582\|Ga0137358_10860952	Not Available	597	Open in IMG/M
3300012683\|Ga0137398_10228418	Not Available	1234	Open in IMG/M
3300012683\|Ga0137398_10466215	Not Available	865	Open in IMG/M
3300012683\|Ga0137398_10947196	Not Available	598	Open in IMG/M
3300012683\|Ga0137398_11208195	Not Available	516	Open in IMG/M
3300012923\|Ga0137359_11112590	Not Available	675	Open in IMG/M
3300012923\|Ga0137359_11344529	Not Available	602	Open in IMG/M
3300012924\|Ga0137413_11432548	Not Available	559	Open in IMG/M
3300012927\|Ga0137416_11055629	Not Available	727	Open in IMG/M
3300012927\|Ga0137416_11662992	Not Available	582	Open in IMG/M
3300014326\|Ga0157380_12660545	Not Available	567	Open in IMG/M
3300016404\|Ga0182037_10778309	Not Available	824	Open in IMG/M
3300020199\|Ga0179592_10055749	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1800	Open in IMG/M
3300020579\|Ga0210407_10042696	Not Available	3374	Open in IMG/M
3300020579\|Ga0210407_11071934	Not Available	612	Open in IMG/M
3300020580\|Ga0210403_10341408	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300020580\|Ga0210403_11060364	Not Available	631	Open in IMG/M
3300020583\|Ga0210401_10940559	Not Available	723	Open in IMG/M
3300020583\|Ga0210401_11330868	Not Available	576	Open in IMG/M
3300021170\|Ga0210400_10905615	Not Available	720	Open in IMG/M
3300021171\|Ga0210405_10302372	Not Available	1264	Open in IMG/M
3300021171\|Ga0210405_10307105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Armatimonadetes → Armatimonadia → Capsulimonadales → Capsulimonadaceae → Capsulimonas → Capsulimonas corticalis	1253	Open in IMG/M
3300021178\|Ga0210408_10343881	Not Available	1189	Open in IMG/M
3300021181\|Ga0210388_11387727	Not Available	590	Open in IMG/M
3300021361\|Ga0213872_10151871	Not Available	1011	Open in IMG/M
3300021403\|Ga0210397_10271853	Not Available	1236	Open in IMG/M
3300021403\|Ga0210397_10739061	Not Available	758	Open in IMG/M
3300021404\|Ga0210389_10745137	Not Available	766	Open in IMG/M
3300021405\|Ga0210387_10055474	All Organisms → cellular organisms → Bacteria	3199	Open in IMG/M
3300021405\|Ga0210387_10189539	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300021407\|Ga0210383_10738038	Not Available	845	Open in IMG/M
3300021407\|Ga0210383_10992315	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300021407\|Ga0210383_11602048	Not Available	536	Open in IMG/M
3300021432\|Ga0210384_10168416	All Organisms → cellular organisms → Bacteria	1968	Open in IMG/M
3300021444\|Ga0213878_10007662	All Organisms → cellular organisms → Bacteria	3804	Open in IMG/M
3300021475\|Ga0210392_10122864	Not Available	1740	Open in IMG/M
3300021477\|Ga0210398_11028086	Not Available	656	Open in IMG/M
3300021479\|Ga0210410_10881084	Not Available	782	Open in IMG/M
3300021559\|Ga0210409_11023455	Not Available	700	Open in IMG/M
3300024271\|Ga0224564_1052238	Not Available	798	Open in IMG/M
3300024288\|Ga0179589_10610513	Not Available	511	Open in IMG/M
3300025922\|Ga0207646_11900756	Not Available	507	Open in IMG/M
3300026319\|Ga0209647_1047257	Not Available	2350	Open in IMG/M
3300026356\|Ga0257150_1028397	Not Available	799	Open in IMG/M
3300026514\|Ga0257168_1084671	Not Available	703	Open in IMG/M
3300026557\|Ga0179587_10403652	Not Available	891	Open in IMG/M
3300027266\|Ga0209215_1018308	Not Available	894	Open in IMG/M
3300027371\|Ga0209418_1026803	Not Available	986	Open in IMG/M
3300027502\|Ga0209622_1002874	All Organisms → cellular organisms → Bacteria	2607	Open in IMG/M
3300027521\|Ga0209524_1084449	Not Available	667	Open in IMG/M
3300027610\|Ga0209528_1088361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300027812\|Ga0209656_10005952	All Organisms → cellular organisms → Bacteria	7831	Open in IMG/M
3300027812\|Ga0209656_10456538	Not Available	564	Open in IMG/M
3300027824\|Ga0209040_10025831	All Organisms → cellular organisms → Bacteria → Acidobacteria	3770	Open in IMG/M
3300027825\|Ga0209039_10332069	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300027884\|Ga0209275_10638868	Not Available	612	Open in IMG/M
3300028047\|Ga0209526_10000832	All Organisms → cellular organisms → Bacteria	20298	Open in IMG/M
3300028047\|Ga0209526_10864794	Not Available	553	Open in IMG/M
3300028536\|Ga0137415_10252013	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300031715\|Ga0307476_11093109	Not Available	586	Open in IMG/M
3300031720\|Ga0307469_12369898	Not Available	518	Open in IMG/M
3300031754\|Ga0307475_11335480	Not Available	554	Open in IMG/M
3300031962\|Ga0307479_10368733	All Organisms → cellular organisms → Bacteria	1420	Open in IMG/M
3300031962\|Ga0307479_10471362	Not Available	1239	Open in IMG/M
3300031962\|Ga0307479_10765774	Not Available	942	Open in IMG/M
3300031962\|Ga0307479_11177779	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	730	Open in IMG/M
3300032180\|Ga0307471_101301815	Not Available	889	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.08%
Host-Associated	Host-Associated	1.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.35%
Aquatic	Environmental → Aquatic	6.73%
Plants	Host-Associated → Plants	1.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.35%
Freshwater	Environmental → Aquatic → Freshwater	6.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.19%
Loam	Environmental → Terrestrial → Soil → Loam	21.15%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.65%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.54%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	6.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320006	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+	Environmental	Open in IMG/M
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001108	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021361	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2	Host-Associated	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027266	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027502	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORE_3864820	2032320006	Soil	AMGLVRQINIPGLRIQRMFSWALPSGELGGLPSEFYQFANSIRSELSAVSVSPLKEAA
F47_12206390	2170459009	Grass Soil	MGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLN
INPhiseqgaiiFebDRAFT_1013424563	3300000364	Soil	EIAMGLVRQINISDLRIQRMFSWAHSSGELGGLPAEFYHFANSIRSELSAVSVRPFGDRE
JGI1027J11758_124621982	3300000789	Soil	AMGLVRQINISDLRIQRMFSWAHSSGELGGLPAEFYHFANSIRSELSAVSVRPFGDRE*
JGI1027J11758_127297301	3300000789	Soil	WEIQHDIAMGLMRPVDVPGLRIRRVFSWALHSGELGGLADAFYQCANSIRNELSATSIPG
JGI12647J13326_1025452	3300001108	Forest Soil	ELSTGLMQQIKIPGLRFGRMFSWAIASGELGGLSADFYRFANSIRSELSAISLEKWKVAA
JGIcombinedJ26739_1000514211	3300002245	Forest Soil	VRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEVA*
JGIcombinedJ26739_1001159211	3300002245	Forest Soil	IAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRKELSAVSVSPLKEAA*
JGIcombinedJ26739_1013172022	3300002245	Forest Soil	MGVVRQINIPGLRIERMFSGALLSGELGGLSGEFYQFANSIRSELSAVSVSPLKEAA*
JGIcombinedJ26739_1018071822	3300002245	Forest Soil	GLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYRFANSIRSELSAVSVRPLKEAA*
C688J35102_1185443811	3300002568	Soil	QSRRRINIPGLRIPRMFSWDLPSGELGGLPGEFYQFAHSIRSELSAVSVRPGKDAA*
JGI25615J43890_10093931	3300002910	Grasslands Soil	VPGLRIERMFSWGLPSGELGGLPAEFYRFANSIRSELSAVSVRPLGN*
JGI25615J43890_10643392	3300002910	Grasslands Soil	GLVQRIKIPGLRFHRTFSWAIASGELGGLPAEFYRFANSIRSELSAISSQKWKTAA*
JGI26341J46601_100064815	3300003219	Bog Forest Soil	IQNELASGVVREIEIPGLRIHRVFSWAIPSGEIGGLAGEFYRFANSIRNELSAVSVRTWRMTL*
JGI26340J50214_100044271	3300003368	Bog Forest Soil	IQNELASGVVREIEIPGLRIHRVFSWAIPSGEIAGLAGEFYRFANSIRNELSAVSVRTWRMTL*
Ga0062389_1025704402	3300004092	Bog Forest Soil	HEIAMGLMRPVEIPGLRIRRMFSWALPSGELGGLAGAFYQFANSIRNELSATRFPG*
Ga0066677_108190932	3300005171	Soil	IPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEAA*
Ga0066388_1071788161	3300005332	Tropical Forest Soil	QHEIAMRLVRAVDIPGLRIQRMFSWALPSGELGGLASVFYQFANSIRNELSATSVPG*
Ga0070714_1016547832	3300005435	Agricultural Soil	DVQDELNMGLLQQIEIPGLRFHRTFSWAIASGELGGLPAEFYRFANSIRSELSAISSQKWKAAA*
Ga0070697_1009566621	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	GLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVHPLIEAA*
Ga0070766_101536431	3300005921	Soil	SGAMREIDIPGLRIHRVFSWAIPSGEIGGLAGEFYKFANLIRNELSAVSVRTWRMTL*
Ga0070716_1002427192	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEAT*
Ga0070712_1013376031	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	INIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVHPLIEAA*
Ga0079219_122440402	3300006954	Agricultural Soil	NIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAASIPG*
Ga0099794_102514311	3300007265	Vadose Zone Soil	QRMVIRVEQGILGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEFA*
Ga0137399_100163059	3300012203	Vadose Zone Soil	QQEIATGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRSLKEAA*
Ga0137399_100591851	3300012203	Vadose Zone Soil	RGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVHPLIEAA*
Ga0137399_107353461	3300012203	Vadose Zone Soil	MGVVRQINIPGLRIERMFSGALLSGELGGLPGEFYQFANSIRSELSAVSVSPLKEAA*
Ga0137399_117265341	3300012203	Vadose Zone Soil	QINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVSPLKEAA*
Ga0137362_101974331	3300012205	Vadose Zone Soil	GLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVHPLKEVA*
Ga0137362_104392493	3300012205	Vadose Zone Soil	AMGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYHFANSIRSELSAVSVRPLKEAA*
Ga0137362_108308942	3300012205	Vadose Zone Soil	GLVRQINVPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRSLKEAA*
Ga0137362_111718161	3300012205	Vadose Zone Soil	QINIPGLRIQRMFSWALPSGELGGLPGKFYQFANSIRSELSAVSARPLKEAA*
Ga0137376_102060513	3300012208	Vadose Zone Soil	FLSSWDIQHELNTGLMQQIKIPGLRFGRTFSWAIASGELGGLSAEFYRFANSIRSELSAISLENWKVAA*
Ga0137360_106926292	3300012361	Vadose Zone Soil	FFSCWEIQQEIATGLVRQINIPGLRIQRMFSWSLPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEVA*
Ga0137360_111527571	3300012361	Vadose Zone Soil	MGLVRQVNVPGLRIQRMFSWGLPSGELGGLPAEFYRFANSIRSELSAVSVRPLAS*
Ga0137358_105667421	3300012582	Vadose Zone Soil	RQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEAA*
Ga0137358_108609522	3300012582	Vadose Zone Soil	QEIAMGLVRQIDIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVSPLKEAA*
Ga0137398_102284183	3300012683	Vadose Zone Soil	IQQEIAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGKFYQFANSIRSELSAVSAGPLKEAA*
Ga0137398_104662152	3300012683	Vadose Zone Soil	SCWDIQKEIAMGLVRQINIPGLRIQRMFSWALASGELGGLPGEFYQFANSIQSELSAVSVRPLKEAA*
Ga0137398_109471961	3300012683	Vadose Zone Soil	GLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVHPSKEAV*
Ga0137398_112081952	3300012683	Vadose Zone Soil	NIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRSLKEAA*
Ga0137359_111125902	3300012923	Vadose Zone Soil	QINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPVIC*
Ga0137359_113445291	3300012923	Vadose Zone Soil	IQQEIAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSLRSELSAVSVSPLKEAA*
Ga0137413_114325482	3300012924	Vadose Zone Soil	GLVRQINIPGLRIQRMFSWALSSGELGGLSGDFYQFANSIRSELSAVSVRPLKEAV*
Ga0137416_110556291	3300012927	Vadose Zone Soil	IPGLRIQRMFSWALPSGELGGLPGKFYQFANSIRSELSAVSAGPLKEAA*
Ga0137416_116629922	3300012927	Vadose Zone Soil	QPEIAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYHFANSIRSELSAVSVRPLKEAA*
Ga0157380_126605451	3300014326	Switchgrass Rhizosphere	FLSFWDIQHELGMGLMQQINIPGLRFERMFSWAVPSGELGGLTGEFYRFANSIRSELSAVSMRRWQDAA*
Ga0182037_107783091	3300016404	Soil	WEIQHEVALGLLRPVKIPGFHIRRMFSWAIPSGEMGGLAGAFYQFANSIRNELSITNIPG
Ga0179592_100557491	3300020199	Vadose Zone Soil	PGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVHPLIEAA
Ga0210407_100426965	3300020579	Soil	MGLVRQINIPGLRIHRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVSPLKEAA
Ga0210407_110719341	3300020579	Soil	QINIPGLRIQRMFSWALPSGELGGLPGKFYQFANSIRSELSAVSVRPLKEAT
Ga0210403_103414083	3300020580	Soil	EQEIAMGLVRQISIPGLRIQRMFSWALPSGELGGILGEFYQFANSMRSELSAVSVSSLKEAA
Ga0210403_110603641	3300020580	Soil	AMGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKETA
Ga0210401_109405591	3300020583	Soil	VGFFSCWEIQQEIAMGVVRQINIPGLRIQRMFSWALLSGELGGLLGEFYQFANSIRSELSAASVSPLKEAA
Ga0210401_113308681	3300020583	Soil	INIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEAA
Ga0210400_109056152	3300021170	Soil	VRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEAA
Ga0210405_103023723	3300021171	Soil	MGLVRQINIAGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAMSVSPLKEAA
Ga0210405_103071051	3300021171	Soil	VRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKETA
Ga0210408_103438812	3300021178	Soil	MGVVRQINIPGLRIQRMFSWALLSGELGGLPGEFYQFANSIRSELSAVSVSPLKEAA
Ga0210388_113877271	3300021181	Soil	QINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSFSPLKETA
Ga0213872_101518713	3300021361	Rhizosphere	YIQQEIARGLVRQINIPGLRIQRMFSWALPSGELGGLANEFYQFANSIRSQLSAVSVHPLKEAA
Ga0210397_102718533	3300021403	Soil	NIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSFSPLKETA
Ga0210397_107390611	3300021403	Soil	GLVRQINIPGLRIQRMFSWALPSGELGGLAGEFYQFANSIRSELSAVSVSPLKEAA
Ga0210389_107451372	3300021404	Soil	IQQEIAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVSPLKETT
Ga0210387_100554744	3300021405	Soil	MGLVQQMNIPGLRIQRMFSWALPSGELGGLPGEFYRFANSIRNELSAVSVQRWKEAA
Ga0210387_101895394	3300021405	Soil	MGLVQQMNIPDLRMFSWALPSGELGGLPGEFNRFANSIRNELSAVSVQQWKEAA
Ga0210383_107380381	3300021407	Soil	IAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGKFYQFANSIRSELSAVSVRPLKEAT
Ga0210383_109923151	3300021407	Soil	IPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEAT
Ga0210383_116020481	3300021407	Soil	MGLVQQMNIPDLRMFSWALPSGELGGLPGEFYRFANSIRNELSAVSVQQWKEAA
Ga0210384_101684164	3300021432	Soil	ITIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEAA
Ga0213878_100076623	3300021444	Bulk Soil	MGLVRQINIPGLRIQRMFSWALPSSELGGLPGAFYQFANSIRSELSTVSVSPLKEAP
Ga0210392_101228642	3300021475	Soil	MVLVSSEHLVRQINIPGLRIQRMFSWALPSGELGGLPAKFYQFANSIRSELSAVSVRPLKEAT
Ga0210398_110280861	3300021477	Soil	GLVRQITIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEAA
Ga0210410_108810841	3300021479	Soil	VGFFSCWEIQQEIAMGVVRQINIPGLRIQRMFSWALLSGELGGLLGEFYQFANSIRSELSAVSVSPLKEAA
Ga0210409_110234551	3300021559	Soil	WRSEIAMGLVRQINIPGLRIHRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVSPLKEAA
Ga0224564_10522381	3300024271	Soil	IAMGLVRQINIAGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEAA
Ga0179589_106105132	3300024288	Vadose Zone Soil	ELNMGLVQRIKIPGLRFHRTFSWAIASGELGGLPAEFYRFANSIRSELSAISSQKWKTAA
Ga0207646_119007562	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	IPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLEEAA
Ga0209647_10472574	3300026319	Grasslands Soil	SMGLVQQIKIPGLRFHRMFSWAIASGELGGLPAEFYRFANSIRSELSAISLEKWKAAA
Ga0257150_10283971	3300026356	Soil	RQIKVPGLRIQRMFSWALSSGELGGLSGDFYQFANSIRSELSAVSVRPLKEAV
Ga0257168_10846711	3300026514	Soil	KVPGLRIQRMFSWALPSGELGGLSGDFYQFANSIRSELSAVSVRPLKEAV
Ga0179587_104036522	3300026557	Vadose Zone Soil	IARGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSARPLKEAA
Ga0209215_10183081	3300027266	Forest Soil	DIQQELGMGLVQQMNIPGLRIQRMFSWALPSGELGGLPGEFYRFANSIRNELSAVSVQRWKEAA
Ga0209418_10268031	3300027371	Forest Soil	IQQELGMGLVQQMNIPGLRIQRMFSWALPSGELGGLPGEFYRFANSIRNELSAVSVQRWKEAA
Ga0209622_10028745	3300027502	Forest Soil	IAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVSPLKEAA
Ga0209524_10844492	3300027521	Forest Soil	PEIATGLVRQINIPGLRIPRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVQPVKEM
Ga0209528_10883611	3300027610	Forest Soil	NIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEAA
Ga0209656_100059521	3300027812	Bog Forest Soil	GVAFFSCWEIQNELASGVVREIEIPGLRIHRVFSWAIPSGEIAGLAGEFYRFANSIRNELSAVSVRTWRMTL
Ga0209656_104565381	3300027812	Bog Forest Soil	GVAFFSCWEIQNELASGVVREIEIPGLRIHRVFSWAIPSGEIGGLAGEFYRFANSIRNELSAVSVRTWRMTL
Ga0209040_100258316	3300027824	Bog Forest Soil	QNELASGVVREIEIPGLRIHRVFSWAIPSGEIAGLAGEFYRFANSIRNELSAVSVRTWRMTL
Ga0209039_103320691	3300027825	Bog Forest Soil	LASGAVREIEIPGLRIHRVFSWAIPSGEIGGLAGEFYKFANSIRNELSAVSVRTWRMTL
Ga0209275_106388681	3300027884	Soil	MGLVRQINIAGLRIQRMFSWALPSGELGGLPGEFYQFANSMRSELSAVSVSPLKEAA
Ga0209526_1000083223	3300028047	Forest Soil	INIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKEVA
Ga0209526_108647941	3300028047	Forest Soil	QQEIAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVHPSKEAV
Ga0137415_102520131	3300028536	Vadose Zone Soil	QEIATGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRSLKEA
Ga0307476_110931091	3300031715	Hardwood Forest Soil	QQEIAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGKFYQFANSIRSELSAVSVSPLKESA
Ga0307469_123698982	3300031720	Hardwood Forest Soil	EIAMRLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVSPLKEAA
Ga0307475_113354802	3300031754	Hardwood Forest Soil	QEIAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVHPLIEA
Ga0307479_103687333	3300031962	Hardwood Forest Soil	EIQQEIAMGLVRQINIPGLRIQRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVAP
Ga0307479_104713623	3300031962	Hardwood Forest Soil	MGVVRQINIPGLRIQRMFSWALPSGELGGLLGEFYQFANSIRSELSAVSVSPLKEAA
Ga0307479_107657742	3300031962	Hardwood Forest Soil	ELNMGLVQRIKIPGLRFHRTFSWAIASGELGGLPAEFYRFANSIRSELSANSSQKWKTAA
Ga0307479_111777791	3300031962	Hardwood Forest Soil	VRQINIPGLRIPRMFSWALPSGELGGLPGEFYQFANSIRSELSAVSVRPLKELA
Ga0307471_1013018151	3300032180	Hardwood Forest Soil	WDIQEELNIGLVQRIKIPGLRFHRTFSWAIASGELGGLPAEFYRFANSIRSELSANSSQKWKTAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097929

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences