Metagenome Family F097922

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097922
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	64 residues
Representative Sequence	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDE
Number of Associated Samples	95
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	99.00 %
% of genes near scaffold ends (potentially truncated)	94.23 %
% of genes from short scaffolds (< 2000 bps)	90.38 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (51.923 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (11.539 % of family members)
Environment Ontology (ENVO)	Unclassified (19.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.44% β-sheet: 4.44% Coil/Unstructured: 71.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00582	Usp	25.00
PF13191	AAA_16	1.92
PF03176	MMPL	1.92
PF13591	MerR_2	1.92
PF00248	Aldo_ket_red	1.92
PF01553	Acyltransferase	1.92
PF02518	HATPase_c	1.92
PF00355	Rieske	0.96
PF00561	Abhydrolase_1	0.96
PF06897	DUF1269	0.96
PF00239	Resolvase	0.96
PF00482	T2SSF	0.96
PF03352	Adenine_glyco	0.96
PF13751	DDE_Tnp_1_6	0.96
PF00753	Lactamase_B	0.96
PF00487	FA_desaturase	0.96
PF10009	DUF2252	0.96
PF00743	FMO-like	0.96
PF07366	SnoaL	0.96
PF00005	ABC_tran	0.96
PF04264	YceI	0.96
PF00111	Fer2	0.96
PF03640	Lipoprotein_15	0.96
PF08818	DUF1801	0.96
PF04542	Sigma70_r2	0.96
PF00903	Glyoxalase	0.96
PF14542	Acetyltransf_CG	0.96
PF09992	NAGPA	0.96
PF13847	Methyltransf_31	0.96
PF00730	HhH-GPD	0.96
PF00106	adh_short	0.96
PF11066	DUF2867	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	1.92
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	1.92
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.96
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.96
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.96
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.96
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.96
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	0.96
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	0.96
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	0.96
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.96
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.96
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.96
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	0.96
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.96
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.96
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	0.96
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.96
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.96
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.96
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.96
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
All Organisms	root	All Organisms	48.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
cellular organisms	root	All Organisms → cellular organisms	48.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	48.08 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	36.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	34.62 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12.50 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3.85 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.85 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2.88 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.96 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.96 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.85 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.96 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.96 %
Corynebacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.85 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.96 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.96 %
Corynebacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium	0.96 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	51.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.85 %
Corynebacterium phocae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium → Corynebacterium phocae	0.96 %
Amycolatopsis pithecellobii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	0.96 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.96 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.96 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN01BGXPK	Not Available	513	Open in IMG/M
3300001867\|JGI12627J18819_10191199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis pithecellobii	828	Open in IMG/M
3300002245\|JGIcombinedJ26739_101541126	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300004092\|Ga0062389_103191191	Not Available	614	Open in IMG/M
3300004643\|Ga0062591_101550901	Not Available	665	Open in IMG/M
3300005177\|Ga0066690_10357998	Not Available	990	Open in IMG/M
3300005333\|Ga0070677_10703386	Not Available	569	Open in IMG/M
3300005434\|Ga0070709_11455143	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005436\|Ga0070713_101988837	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005439\|Ga0070711_101343942	Not Available	621	Open in IMG/M
3300005440\|Ga0070705_100041040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2635	Open in IMG/M
3300005471\|Ga0070698_100022189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6646	Open in IMG/M
3300005471\|Ga0070698_101669348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300005535\|Ga0070684_101382115	Not Available	663	Open in IMG/M
3300005547\|Ga0070693_101125638	Not Available	600	Open in IMG/M
3300005549\|Ga0070704_101704737	Not Available	582	Open in IMG/M
3300005554\|Ga0066661_10491724	Not Available	743	Open in IMG/M
3300005921\|Ga0070766_10303168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1026	Open in IMG/M
3300005950\|Ga0066787_10086264	Not Available	652	Open in IMG/M
3300006058\|Ga0075432_10338175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	635	Open in IMG/M
3300006058\|Ga0075432_10462451	Not Available	559	Open in IMG/M
3300006059\|Ga0075017_100521094	Not Available	903	Open in IMG/M
3300006173\|Ga0070716_100352320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1042	Open in IMG/M
3300006175\|Ga0070712_101711410	Not Available	550	Open in IMG/M
3300006797\|Ga0066659_10503461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	971	Open in IMG/M
3300006800\|Ga0066660_10444205	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300006852\|Ga0075433_11522626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Corynebacteriaceae → Corynebacterium → Corynebacterium phocae	578	Open in IMG/M
3300006854\|Ga0075425_101064091	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300006854\|Ga0075425_101539100	Not Available	750	Open in IMG/M
3300006903\|Ga0075426_11450734	Not Available	521	Open in IMG/M
3300006914\|Ga0075436_100361057	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1048	Open in IMG/M
3300006954\|Ga0079219_10807582	Not Available	738	Open in IMG/M
3300007788\|Ga0099795_10125867	Not Available	1029	Open in IMG/M
3300009092\|Ga0105250_10568246	Not Available	522	Open in IMG/M
3300009094\|Ga0111539_11776376	Not Available	715	Open in IMG/M
3300009100\|Ga0075418_12423451	Not Available	573	Open in IMG/M
3300009143\|Ga0099792_10249143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1033	Open in IMG/M
3300009162\|Ga0075423_10276000	Not Available	1761	Open in IMG/M
3300009176\|Ga0105242_12962548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	525	Open in IMG/M
3300009551\|Ga0105238_10316523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1546	Open in IMG/M
3300009672\|Ga0116215_1465739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	547	Open in IMG/M
3300012211\|Ga0137377_11611500	Not Available	573	Open in IMG/M
3300012211\|Ga0137377_11625624	Not Available	569	Open in IMG/M
3300012285\|Ga0137370_10528208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	724	Open in IMG/M
3300012951\|Ga0164300_10749802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300012955\|Ga0164298_10134028	Not Available	1366	Open in IMG/M
3300012957\|Ga0164303_10132568	All Organisms → cellular organisms → Bacteria	1291	Open in IMG/M
3300012957\|Ga0164303_11014427	Not Available	592	Open in IMG/M
3300012961\|Ga0164302_10951099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	664	Open in IMG/M
3300012961\|Ga0164302_11636142	Not Available	537	Open in IMG/M
3300013297\|Ga0157378_10860729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	935	Open in IMG/M
3300014493\|Ga0182016_10858611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	502	Open in IMG/M
3300014501\|Ga0182024_11279032	All Organisms → cellular organisms → Bacteria → Proteobacteria	852	Open in IMG/M
3300016357\|Ga0182032_10895144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	754	Open in IMG/M
3300018042\|Ga0187871_10357227	Not Available	807	Open in IMG/M
3300018468\|Ga0066662_10738322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300022557\|Ga0212123_10344406	Not Available	1022	Open in IMG/M
3300024224\|Ga0247673_1043398	Not Available	633	Open in IMG/M
3300025899\|Ga0207642_10583384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300025900\|Ga0207710_10733692	Not Available	519	Open in IMG/M
3300025906\|Ga0207699_10165864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1474	Open in IMG/M
3300025928\|Ga0207700_11812725	Not Available	536	Open in IMG/M
3300025934\|Ga0207686_10820708	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300025941\|Ga0207711_10946344	Not Available	800	Open in IMG/M
3300025945\|Ga0207679_11777291	Not Available	563	Open in IMG/M
3300026318\|Ga0209471_1194808	Not Available	777	Open in IMG/M
3300027565\|Ga0209219_1050458	Not Available	1038	Open in IMG/M
3300027727\|Ga0209328_10269505	Not Available	506	Open in IMG/M
3300027853\|Ga0209274_10532539	Not Available	608	Open in IMG/M
3300027904\|Ga0209737_11680271	Not Available	544	Open in IMG/M
3300027908\|Ga0209006_10665906	All Organisms → cellular organisms → Bacteria → Terrabacteria group	855	Open in IMG/M
3300028047\|Ga0209526_10559674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300028759\|Ga0302224_10181395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	831	Open in IMG/M
3300028877\|Ga0302235_10093409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1376	Open in IMG/M
3300029993\|Ga0302304_10295273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	593	Open in IMG/M
3300029999\|Ga0311339_10135364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2934	Open in IMG/M
3300030520\|Ga0311372_12865256	Not Available	527	Open in IMG/M
3300030580\|Ga0311355_11367125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	617	Open in IMG/M
3300030707\|Ga0310038_10208538	Not Available	928	Open in IMG/M
3300031057\|Ga0170834_104028443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300031231\|Ga0170824_102811115	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	550	Open in IMG/M
3300031525\|Ga0302326_10033499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	10206	Open in IMG/M
3300031544\|Ga0318534_10825351	Not Available	520	Open in IMG/M
3300031708\|Ga0310686_117978590	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300031720\|Ga0307469_11154550	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300031819\|Ga0318568_11013298	Not Available	513	Open in IMG/M
3300031832\|Ga0318499_10433152	Not Available	502	Open in IMG/M
3300031845\|Ga0318511_10555406	Not Available	533	Open in IMG/M
3300031910\|Ga0306923_11762812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	637	Open in IMG/M
3300032035\|Ga0310911_10635393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300032067\|Ga0318524_10611147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300032180\|Ga0307471_102268199	Not Available	685	Open in IMG/M
3300032205\|Ga0307472_101918576	Not Available	591	Open in IMG/M
3300032211\|Ga0310896_10595922	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300032895\|Ga0335074_10526607	Not Available	1214	Open in IMG/M
3300032895\|Ga0335074_10734868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	940	Open in IMG/M
3300032898\|Ga0335072_10247524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2053	Open in IMG/M
3300032898\|Ga0335072_11499436	Not Available	576	Open in IMG/M
3300032955\|Ga0335076_10233480	Not Available	1736	Open in IMG/M
3300033134\|Ga0335073_10176620	All Organisms → cellular organisms → Bacteria	2677	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.81%
Host-Associated	Host-Associated	20.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.96%
Plants	Host-Associated → Plants	19.23%
Aquatic	Environmental → Aquatic	3.85%
Arthropoda	Host-Associated → Arthropoda	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.27%
Peat	Environmental → Terrestrial → Peat	7.69%
Freshwater	Environmental → Aquatic → Freshwater	1.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Sediment	Environmental → Aquatic → Sediment	0.96%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Loam	Environmental → Terrestrial → Soil → Loam	20.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.35%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.58%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	7.69%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	7.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.54%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.62%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	5.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.88%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.96%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.96%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005950	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024224	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK14	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027727	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027904	Cubitermes ugandensis P3 segment gut microbial communities from Kakamega Forest, Kenya - Cu122 P3 (SPAdes)	Host-Associated	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028877	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N3_3	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_08457990	2170459013	Grass Soil	VLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAV
JGI12627J18819_101911992	3300001867	Forest Soil	MNKPVLFCYDGSEGSRTALGAAIEWIKPAADAVVLTVWTPAALQLARAGSFVVAIPDE
JGIcombinedJ26739_1015411262	3300002245	Forest Soil	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDEQEAATA
Ga0062389_1031911911	3300004092	Bog Forest Soil	MNKPVLFCYDGSDGSRSALRAAAEVVTHPADAVVLAVWMPAVVSLVRAGSFLTAVPNEGEID
Ga0062591_1015509011	3300004643	Soil	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWTPAAVQLALAGSFVVAVPNEGEIDDKEA
Ga0062594_1029213431	3300005093	Soil	VSKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVRLARAGSFVVAVPNEGEIDEREAATARQIAEEGAAGARKR
Ga0066690_103579983	3300005177	Soil	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPASIQSARAGSFIVAVPNEGEIDEQEA
Ga0070677_107033861	3300005333	Miscanthus Rhizosphere	VNKPVLFCDDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVANEGEIDAEE
Ga0070709_114551432	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VKKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEI
Ga0070713_1019888372	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDE
Ga0070711_1013439423	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPAAVRLARAGSFVVAVPNEGEI
Ga0070705_1000410405	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWTPAAVQLARAGSFLV
Ga0070698_10002218911	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VNKPVLFCYDGSEGSKTALAAAVELIKPADAVVLVVWTPAAVQLARAGSFLVAVPNEGEIDE
Ga0070698_1016693482	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWTPAAVQLARAGSFLVAVPNEGEIDE
Ga0070684_1013821151	3300005535	Corn Rhizosphere	VNKPVLFCDDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVANEGEIDAEEAAIARQIAEEGA
Ga0070693_1011256381	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNKPVLFCHDGSDGSRTALGAAVELIKPADAVVLVVWMPAAVQLARAGSFLAAVPNEGEIDEQEAAAA
Ga0070704_1017047371	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VHKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVRLARAGSFVVAVPNEGEIDEREAATA
Ga0066661_104917241	3300005554	Soil	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPASIQLARAGSFIVAVPNEGEIDEQ*
Ga0070766_103031683	3300005921	Soil	MNELVLFCYDGSDGSKSALHAAGDLITSPADAVVLVVWMPAVVSLVRAGSFLTAVPNEGEIDE
Ga0066787_100862641	3300005950	Soil	VSKPVLFCYDGSDGSKTALATAAALIKPADAVVLAVWMLAATQLARAGSFIVAVPNEGEIDEQE
Ga0075432_103381751	3300006058	Populus Rhizosphere	VNKPVLFCHDGSDGSRTALAAAVELIKPGDAVVLVVWMPAAVQLARAGSFVVAVPN
Ga0075432_104624511	3300006058	Populus Rhizosphere	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVRLARAGSFLVAVPN
Ga0075017_1005210941	3300006059	Watersheds	MDRPVLFCYDGSEGSKAALSVAVELVMHPADAVVLVVWTPVALQLARAGSLLVA
Ga0070716_1003523202	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDD
Ga0070712_1017114102	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VNKPVLFCHDGSEGSRTALGAAVELIKPADAVVLVVWTPAAVQLARAGSFVVAVPNEGEIDDEE
Ga0066659_105034612	3300006797	Soil	VVNKPVLFCHDGSDGSRTALAAAVEVIKPADAVVLVVWTPAVVQLSRAGSFVVAVPNEGEIDEQEAAI
Ga0066660_104442051	3300006800	Soil	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPASIQLARAGSFIVA
Ga0075433_115226261	3300006852	Populus Rhizosphere	VNKPVLFCHDGSDGSRTALAVAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDD
Ga0075425_1010640912	3300006854	Populus Rhizosphere	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWTPAAVQLARAGSFLVAVAGARGFVAT*
Ga0075425_1015391001	3300006854	Populus Rhizosphere	VNKPVLFCDDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVANEGEIDAEEAA
Ga0075426_114507341	3300006903	Populus Rhizosphere	VNKPVLFCHDGSDGSRTALAAAVELIKPGDAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDDKEAATARQIAE
Ga0075436_1003610571	3300006914	Populus Rhizosphere	VSKPVLFCYDGSDGSRTALGAAVELIKPADAVVLVVWMPAAVQLARAGSFVAAVPNEGEIDEQE
Ga0079219_108075821	3300006954	Agricultural Soil	VNKPVLFCDDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVANEGEIDAEEAAIA
Ga0099795_101258671	3300007788	Vadose Zone Soil	VNKPVLFCYDGSDGSRTALAAAVELIKPADAVVLVVWTPAAVQLARAGSFVVAVPNEGEIDEQ
Ga0105250_105682461	3300009092	Switchgrass Rhizosphere	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWTPAAVQLFQSGLFLVA
Ga0111539_117763761	3300009094	Populus Rhizosphere	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVRLARAGSFVVAVPNEGEIDEQEAATAQQIAEEG
Ga0075418_124234511	3300009100	Populus Rhizosphere	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDDKEAATARQIAEEGAA
Ga0099792_102491431	3300009143	Vadose Zone Soil	VNKPVLFCYDGSDGSKTALDAAAEMIKPADAVVLVVWMPAAVQLARSGSFVVAIPNEGEIDEQEATTARQ
Ga0075423_102760002	3300009162	Populus Rhizosphere	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWTPATVQLARAGSFLLAVPNE
Ga0105242_129625482	3300009176	Miscanthus Rhizosphere	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAALRLARAGSFVVAVPNEGEIDEQEAATALQI
Ga0105238_103165232	3300009551	Corn Rhizosphere	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDEQEA
Ga0116215_14657391	3300009672	Peatlands Soil	VLFCYDGSDGSKTALAAAGELIKPADAVVLVVWMPAAVQLARAGSFIVAVPNEGEIDEQE
Ga0137377_116115002	3300012211	Vadose Zone Soil	VNKPVLFCYDGSDGSRTALAAAVELIKPADAVVLVVWMSAAVQLARAGSFLVAVPNEGEIDEQEAAAARQIA
Ga0137377_116256241	3300012211	Vadose Zone Soil	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWTPAAVQLARAGSFVVAVPNEGE
Ga0137370_105282082	3300012285	Vadose Zone Soil	VNKPVLFCYDGSEGSKTALHAAAELIKPADAVVLAVWTTVAVQLARTGSFLVAIPN
Ga0164300_107498022	3300012951	Soil	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVCMPAAVQLALAGSFVVAIPNEGEI
Ga0164298_101340281	3300012955	Soil	VNTPVLCCHDGSEGSRTALAAAVELIKPADAVVLVVWIPAAVRLAQAGSFVVAVPNEG
Ga0164303_101325681	3300012957	Soil	VKKPVLFCHDGSEGSRTALAAAVELIKPADAVVLVVWMPAAVRLAQAGSFVVA
Ga0164303_110144272	3300012957	Soil	VNKPVLFCDDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDDK
Ga0164302_109510992	3300012961	Soil	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVFVPNEGEIDEQEAATARQ
Ga0164302_116361421	3300012961	Soil	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWTPAAVQLARAGSFVVAVPNEGEIDEQEAATARQIAEEGAA
Ga0157378_108607291	3300013297	Miscanthus Rhizosphere	VNKPVLFCDDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVANEGEI
Ga0182016_108586111	3300014493	Bog	MTKPVLFCYDGSDGSKSALLAAGELVTHPAAAVVLVVWMPAVVSLVRAGSFLVDVPNEGEIDEQEAA
Ga0182024_110545001	3300014501	Permafrost	MNKPVLFCYDGSDGSRTALLVAAELVTQLADAVVLAVWMPAVVSLVRAGSFVTAVPNEGEIDEQEAAFAKRIAEEGAASARGRGHN
Ga0182024_112790323	3300014501	Permafrost	MNKPVLFCYDGSDGSRTALLVAAELVTQLADAVVLAVWMPAVVSLVRAGSFVTAVPNEGEIDEQEAAFAKRIAEEGA
Ga0182032_108951441	3300016357	Soil	VNKPVLFCYDGSDGSKTALGAVIDLIKPGDAVVLVVWMPATVQLARAGSFVVAVPNEGEI
Ga0187871_103572271	3300018042	Peatland	MDRPVLFCYDGSEGSKAALSVAVELVMHPADAVVLVVWTPVALQLARGGSLLVAVPNEG
Ga0187772_102702911	3300018085	Tropical Peatland	MNKPVLFCYDGSDGSRTALRAAIEWIIKPADAVVLTVWTPAEVLLTRAGSFVVAIPNEGEVDQREAASAQQIAEEGAAGARERGYNASARVAQSNESV
Ga0066662_107383223	3300018468	Grasslands Soil	VNKPVLFCYDGSEGSKTACGAAVELIKPGDAVVLVVWTTAAEQLARAGSFLAAIPDEG
Ga0212123_103444061	3300022557	Iron-Sulfur Acid Spring	VNKPVLFCYDGSDGSKTALAAAVEVIKPADAVVLVVWMPATVQLARAGSFVVAVPNEGEIDEEEA
Ga0247673_10433981	3300024224	Soil	VNKPVLFCDDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVANE
Ga0207642_105833841	3300025899	Miscanthus Rhizosphere	MNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLALAGSFVV
Ga0207710_107336921	3300025900	Switchgrass Rhizosphere	VNKPVLFCHDGSEGSRTALGAAVELIKPADAVVLVVWTPAAVQLARAGSFVVAVPNEGEIDDEEAAIARQIAEEGAA
Ga0207699_101658641	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDDREVATARQIA
Ga0207700_118127252	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VTKPVLFCYDGSDGSKMALAAAVQLIKPADAVVLVVWTPAAVQLAQAGSFLVAVPNEGEIDDQEAGIARQLAEE
Ga0207686_108207081	3300025934	Miscanthus Rhizosphere	VNKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNE
Ga0207711_109463442	3300025941	Switchgrass Rhizosphere	VNKPVLFCHDGSEGSRTALGAAVELIKPADAVVLVVWTPAAVQLARAGSFVVAVP
Ga0207679_117772911	3300025945	Corn Rhizosphere	VNKPVLFCHDGSEGSRTALGAAVELIKPADAVVLVVWTPAAVQLARAGSFVVAVPNEGEIDDEEAAIARQIAEEGAAA
Ga0209471_11948081	3300026318	Soil	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPASIQLARAGSFIVAVPNEGEIDEQ
Ga0209219_10504582	3300027565	Forest Soil	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAIPNEGEIDEQEAATAREI
Ga0209328_102695052	3300027727	Forest Soil	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEI
Ga0209274_105325392	3300027853	Soil	MNRPVLFCYDGSDGSQAALSVAVELIMHPADAVVLVVWTPIAIQLARGGSLLAFV
Ga0209737_116802711	3300027904	Termite Gut	VNKPASFCYDGSDGSKTALRAVIDLIKPADAVVLVVWTPAEVQLSRAGSFIVAIPNDGEIDEREVA
Ga0209006_106659061	3300027908	Forest Soil	VTKPVLFCYDGSDGSSSALAAAVELIKPADAVVLVVWMPAAVQLAGAGSFVVAIPN
Ga0209526_105596741	3300028047	Forest Soil	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPAAVQLARAGSFVVAVPNEGEIDEQEAATARQIAE
Ga0302224_101813951	3300028759	Palsa	MSKVILFCYDGSAGSKAALRAADEVLMHPADAVVLTVWMPAAVLLARAGSFIVDVPNEDEVDEQEAASA
Ga0302235_100934091	3300028877	Palsa	MDRPVLFCQDGSEGSTAALSVAVELVMHPADAVVLVVWTPVAVQLARGGSLLAAV
Ga0302304_102952731	3300029993	Palsa	MDKPVLFCYDGSEGSRAALRAAVELVIRPADAVVLVVWMPAVVSLVRAGSFLTAVPNEGEIDEQEAAFARRLAEE
Ga0311339_101353645	3300029999	Palsa	MDKPVLFCYDGSAGSKSALAAAAGLVMHPADAVVLAVWTPIAIQLARGGSLMTAVPNEGEIDA
Ga0311372_128652562	3300030520	Palsa	MNRPVLFCYDGSEGSKAALSVAVELIMHPADALVLVVWTPIAVQLARGGSLLAAVPNE
Ga0311355_113671252	3300030580	Palsa	MDKPVLFCYDGSAGSKSALAAAAGLVMHPADAVVLAVWTPIAIQLARGGSLMTAVPNE
Ga0310038_102085381	3300030707	Peatlands Soil	VNRPVLFCHDGSDGSKTALAAATELIKPADAVVLVVWTPAAVQLARAGSFVVAVPNEGEIDDH
Ga0302180_101419471	3300031028	Palsa	MSKVILFCYDGSAGSKAALRAADEVLMHPADAVVLTVWMPAAVLLARAGSFIVDVPNEDEVDEQEAASAQRIAEEGAEGARGRGYNASARVARAPES
Ga0170834_1040284432	3300031057	Forest Soil	VVIKPVLFCHDGSDGSRTALAAAVELIKPADAVVLVVWTPAAVQLARAGSFVVAVPNEGEIDDEEAAVARQIAEEGA
Ga0170824_1028111151	3300031231	Forest Soil	MDRLVLFCYDGSDGSKSALAVAAEIGGGPADAVVLTVWMPATTLLARGGSLATAYVPNEG
Ga0302326_100334999	3300031525	Palsa	MSKVILFCYDGSAGSKAALRAADEVLMHPADAVVLTVWMPAAVLLARAGSFIVDVPNEDEVDEQEAASAQRIAEEGAE
Ga0318534_108253511	3300031544	Soil	MNKPVLFCYDGSEGSKTALGGVVDLIKPGDAVVLVVWTRAIVQLARAGSFLVDIPNEGEIDDQ
Ga0310686_1179785902	3300031708	Soil	MNKPVLFCYDGSDGSLSAMRAAGELVKNPADAVVLVVWMSAVASLVRAGSFLTAVPNEGEIDEQE
Ga0307469_111545501	3300031720	Hardwood Forest Soil	VNKPVLFCYDGSDGSKTALAAAVALIKPADAVVLVVWTPAAVQLARAGSFLVAVPNEGEIDEQEA
Ga0318568_110132982	3300031819	Soil	VTKPVLFCYDGSEGSKTALGAVIELIKPGDAVVLVVWMPAVVQLARAGSFVVAVPNEGEIDAQE
Ga0318499_104331521	3300031832	Soil	MNKPVLFCYDGSEGSKTALGGVVDLIKPGDAVVLVVWTRAIVQLARAGSFLVDIPNEGEIDDQEAARARQIAEE
Ga0318511_105554061	3300031845	Soil	MNKPVLFCYDGSEGSKTALGGVVDLIKPGDAVVLVVWTRAIVQLARAGSFLVDIP
Ga0306923_117628122	3300031910	Soil	MNKPVLFCYDGSEGSKTALGGVVDLIKPGDAVVLVVWTRAIVQLARAGSFLVDIPNEGEIDDQEAA
Ga0310911_106353932	3300032035	Soil	VNKPVLFCYDGSDGSKTALGAVIDLIKPGDAVVLVVWMPATVQLARAGSFVVAVPNE
Ga0318524_106111471	3300032067	Soil	VNKPVLFCYDGSDGSKTALGAAGELIKPGDAVVLVVWMPAMLQLSRAGSFVVAVPN
Ga0307471_1022681992	3300032180	Hardwood Forest Soil	VTKPVLFCYDGSDGSKTALAAAVQLIKPADAVVLVVWTPAAVQLAQAGSFLVAVPNEG
Ga0307472_1019185761	3300032205	Hardwood Forest Soil	VNKPVLFCHDGSEGSRTALGAAVELIKPADAVVLVVWTPAAVQLARAGSFVVAVPNEGEIDD
Ga0310896_105959222	3300032211	Soil	VNKPVLFCHDGSDGSRTALAAAVELIKPGDAVVLVVWMPAAVQLARAGSFVV
Ga0335074_105266073	3300032895	Soil	MNKPVLFCYDGSEGSRTALTAAIEWIKPGADAVVLTVWTPAEVKLARAGSFVVAIPNEGEVDEQEAE
Ga0335074_107348681	3300032895	Soil	MNKPILFCYDGSEGSDAALRAVVDLIKPGDAVVLVVWMPAALQLARAGSFLVDIPDEGEVDAKEAA
Ga0335072_102475241	3300032898	Soil	VNKPVLFCYDGSDGSKTALAAAVELIKPADAVVLVVWMPAAVQLARSGSFVVAVPNEGEIDEQEA
Ga0335072_114994362	3300032898	Soil	MTRPVLFCYDGSEGSRTALTAAGELISPCDAVVLAVWTPAAVLLSRAGSFVVAVPNEGEVDEQEAAAA
Ga0335076_102334801	3300032955	Soil	VNKPVLFCYDGSDGSRAALTGAIELIKPADAVVLVVWTPAALLLARAGSFLV
Ga0335073_101766201	3300033134	Soil	MNKPVLLCTDGSDGSKTALTAAAEWITPSDVVVLTVWTRAEVQLARAGSFLVAIPNEGEIDEQEAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097922

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences