Metagenome Family F097898

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097898
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	46 residues
Representative Sequence	MIWVGSFKSLQSALDKPRFGAALEVHTWLRSEIGLISPFVDWLM
Number of Associated Samples	81
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.04 %
% of genes near scaffold ends (potentially truncated)	90.38 %
% of genes from short scaffolds (< 2000 bps)	86.54 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.115 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (36.538 % of family members)
Environment Ontology (ENVO)	Unclassified (31.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 18.06% β-sheet: 0.00% Coil/Unstructured: 81.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07690	MFS_1	19.23
PF07883	Cupin_2	12.50
PF13561	adh_short_C2	6.73
PF01370	Epimerase	3.85
PF00440	TetR_N	2.88
PF16884	ADH_N_2	1.92
PF03061	4HBT	0.96
PF00126	HTH_1	0.96
PF03928	HbpS-like	0.96
PF12697	Abhydrolase_6	0.96
PF13340	DUF4096	0.96
PF00296	Bac_luciferase	0.96
PF08448	PAS_4	0.96
PF11453	DUF2950	0.96
PF13581	HATPase_c_2	0.96
PF12680	SnoaL_2	0.96
PF05368	NmrA	0.96
PF04248	NTP_transf_9	0.96
PF00106	adh_short	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.96
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	39.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.58 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.58 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.69 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.58 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.88 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.58 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.69 %
Unclassified	root	N/A	2.88 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.58 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	3.85 %
Unclassified	root	N/A	2.88 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	1.92 %
Acidisarcina	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.58 %
Unclassified	root	N/A	2.88 %
Granulicella aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	1.92 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.92 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.96 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.96 %
Acidisarcina polymorpha	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10030280	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2110	Open in IMG/M
3300002914\|JGI25617J43924_10041922	All Organisms → cellular organisms → Bacteria	1653	Open in IMG/M
3300002914\|JGI25617J43924_10047997	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300002914\|JGI25617J43924_10102738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1021	Open in IMG/M
3300002914\|JGI25617J43924_10327892	Not Available	529	Open in IMG/M
3300002917\|JGI25616J43925_10149597	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300002917\|JGI25616J43925_10240330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	683	Open in IMG/M
3300004633\|Ga0066395_10249226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300005332\|Ga0066388_104618696	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300005439\|Ga0070711_101025382	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300005439\|Ga0070711_101742372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300005555\|Ga0066692_10628765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella aggregans	671	Open in IMG/M
3300005557\|Ga0066704_10652543	All Organisms → cellular organisms → Bacteria	669	Open in IMG/M
3300005921\|Ga0070766_10199343	All Organisms → cellular organisms → Bacteria	1250	Open in IMG/M
3300006173\|Ga0070716_100888871	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300006173\|Ga0070716_101147827	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300006806\|Ga0079220_10474349	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300006871\|Ga0075434_100620393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300007255\|Ga0099791_10164619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300007255\|Ga0099791_10216014	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300007255\|Ga0099791_10408093	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300007265\|Ga0099794_10115305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1348	Open in IMG/M
3300007265\|Ga0099794_10224986	Not Available	964	Open in IMG/M
3300007265\|Ga0099794_10723711	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300009038\|Ga0099829_11547237	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300009038\|Ga0099829_11563603	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300009089\|Ga0099828_10120149	All Organisms → cellular organisms → Bacteria → Acidobacteria	2295	Open in IMG/M
3300010046\|Ga0126384_10675467	All Organisms → cellular organisms → Bacteria → Acidobacteria	913	Open in IMG/M
3300010322\|Ga0134084_10151067	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300010360\|Ga0126372_11816335	All Organisms → cellular organisms → Bacteria → Acidobacteria	653	Open in IMG/M
3300011120\|Ga0150983_15851825	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300011269\|Ga0137392_10027813	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidisarcina → Acidisarcina polymorpha	4062	Open in IMG/M
3300011269\|Ga0137392_10136083	All Organisms → cellular organisms → Bacteria	1973	Open in IMG/M
3300011269\|Ga0137392_10334895	All Organisms → cellular organisms → Bacteria → Acidobacteria	1253	Open in IMG/M
3300012096\|Ga0137389_10149712	All Organisms → cellular organisms → Bacteria → Proteobacteria	1909	Open in IMG/M
3300012189\|Ga0137388_11060424	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300012203\|Ga0137399_10599962	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300012203\|Ga0137399_11685301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	522	Open in IMG/M
3300012205\|Ga0137362_10051288	All Organisms → cellular organisms → Bacteria	3365	Open in IMG/M
3300012361\|Ga0137360_10155872	All Organisms → cellular organisms → Bacteria	1815	Open in IMG/M
3300012362\|Ga0137361_10056324	All Organisms → cellular organisms → Bacteria	3266	Open in IMG/M
3300012582\|Ga0137358_10648679	All Organisms → cellular organisms → Bacteria → Acidobacteria	707	Open in IMG/M
3300012917\|Ga0137395_11177824	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300012918\|Ga0137396_10044125	All Organisms → cellular organisms → Bacteria	3028	Open in IMG/M
3300012922\|Ga0137394_10948358	All Organisms → cellular organisms → Bacteria → Acidobacteria	717	Open in IMG/M
3300012923\|Ga0137359_10793446	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300012927\|Ga0137416_10140542	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1876	Open in IMG/M
3300012927\|Ga0137416_10385873	Not Available	1183	Open in IMG/M
3300012927\|Ga0137416_11138875	All Organisms → cellular organisms → Bacteria → Acidobacteria	701	Open in IMG/M
3300012930\|Ga0137407_10533855	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300012944\|Ga0137410_10279783	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300012957\|Ga0164303_10079170	All Organisms → cellular organisms → Bacteria → Acidobacteria	1562	Open in IMG/M
3300015052\|Ga0137411_1004382	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300015053\|Ga0137405_1378243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6332	Open in IMG/M
3300015054\|Ga0137420_1441728	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300015245\|Ga0137409_10689833	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300016270\|Ga0182036_11431451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300019789\|Ga0137408_1082727	All Organisms → cellular organisms → Bacteria	2391	Open in IMG/M
3300020170\|Ga0179594_10068753	All Organisms → cellular organisms → Bacteria → Acidobacteria	1230	Open in IMG/M
3300020579\|Ga0210407_10185369	All Organisms → cellular organisms → Bacteria → Acidobacteria	1614	Open in IMG/M
3300020579\|Ga0210407_10246318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1392	Open in IMG/M
3300020583\|Ga0210401_10567678	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300021046\|Ga0215015_10761954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	601	Open in IMG/M
3300021171\|Ga0210405_10912034	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300021178\|Ga0210408_10405611	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300021180\|Ga0210396_11320697	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300021401\|Ga0210393_11630101	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300021406\|Ga0210386_11186407	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300021474\|Ga0210390_10559709	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300021475\|Ga0210392_11105168	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300021478\|Ga0210402_10019603	All Organisms → cellular organisms → Bacteria	5800	Open in IMG/M
3300021479\|Ga0210410_10000908	All Organisms → cellular organisms → Bacteria	29079	Open in IMG/M
3300021559\|Ga0210409_10798608	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300024330\|Ga0137417_1274438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2028	Open in IMG/M
3300025906\|Ga0207699_10293883	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	1133	Open in IMG/M
3300025910\|Ga0207684_10711404	All Organisms → cellular organisms → Bacteria → Acidobacteria	853	Open in IMG/M
3300026320\|Ga0209131_1323418	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300026322\|Ga0209687_1162455	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300026377\|Ga0257171_1012045	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300026446\|Ga0257178_1013362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	932	Open in IMG/M
3300026508\|Ga0257161_1096623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300026515\|Ga0257158_1010735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1406	Open in IMG/M
3300026532\|Ga0209160_1126519	All Organisms → cellular organisms → Bacteria → Acidobacteria	1242	Open in IMG/M
3300027297\|Ga0208241_1070446	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300027548\|Ga0209523_1105764	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300027698\|Ga0209446_1001205	All Organisms → cellular organisms → Bacteria → Proteobacteria	6079	Open in IMG/M
3300027698\|Ga0209446_1117251	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300027768\|Ga0209772_10062693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1116	Open in IMG/M
3300027846\|Ga0209180_10086760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1772	Open in IMG/M
3300027846\|Ga0209180_10486640	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300027879\|Ga0209169_10116067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1388	Open in IMG/M
3300028047\|Ga0209526_10668860	All Organisms → cellular organisms → Bacteria → Acidobacteria	657	Open in IMG/M
3300031231\|Ga0170824_113978177	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300031231\|Ga0170824_116084980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	557	Open in IMG/M
3300031708\|Ga0310686_106229738	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300031715\|Ga0307476_10436764	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300031753\|Ga0307477_10043831	All Organisms → cellular organisms → Bacteria	3073	Open in IMG/M
3300031754\|Ga0307475_10040220	All Organisms → cellular organisms → Bacteria	3458	Open in IMG/M
3300031754\|Ga0307475_10161391	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300031754\|Ga0307475_10496138	All Organisms → cellular organisms → Bacteria → Proteobacteria	980	Open in IMG/M
3300031823\|Ga0307478_10722694	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300032174\|Ga0307470_11301230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300032180\|Ga0307471_100552163	All Organisms → cellular organisms → Bacteria → Acidobacteria	1306	Open in IMG/M
3300032180\|Ga0307471_103798141	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.15%
Aquatic	Environmental → Aquatic	2.88%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.15%
Freshwater	Environmental → Aquatic → Freshwater	2.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.69%
Loam	Environmental → Terrestrial → Soil → Loam	13.46%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.54%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	36.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026446	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-B	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_100302801	3300002561	Grasslands Soil	MIWVGSFKPLQSALAKLDFTGAPLEVHTWVQSEIGLISPLVD
JGI25617J43924_100419221	3300002914	Grasslands Soil	MIWVGSFKSLQSALDKPRFAVPLEVHTWLPSDIGLISPFVDWLISLIAESRCVR
JGI25617J43924_100479971	3300002914	Grasslands Soil	MLWVGNFKSLQSVLDKPSSGAPLEVHTWLRSETGLISPLVDWLVSLVARSGCVPG
JGI25617J43924_101027382	3300002914	Grasslands Soil	MIWVGSFKSLQSILSKPRFSGAPLEVHTWVRSEIALISPLVAWL
JGI25617J43924_103278921	3300002914	Grasslands Soil	MIWVGSFKSLRSALRERRFITAPLEVHTWLRSEIGLISPLVDWLTSLIAG
JGI25616J43925_101495971	3300002917	Grasslands Soil	MIWVGSFKSLQSALDKPRFAVPLEVHTWLPSDIGLISPFVDWLISLIAES
JGI25616J43925_102403301	3300002917	Grasslands Soil	MTWVGSFKSLQSVLRKPRFTGAPLQVHTWVRSEIGLISPLVDWLMSLMVGSC
Ga0066395_102492261	3300004633	Tropical Forest Soil	VICVGSFKSLESLRDKPRLTGAPFEVRTWVGSDTRLISPLVDWLMNLVAES
Ga0066388_1046186961	3300005332	Tropical Forest Soil	MIWVGSLRSLQDVIPKLRFTDAPVEVHTWLRSEIGLISPLVDWLMSLIAG
Ga0070711_1010253821	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLWVGSFQSLQSVLTKPRFSGEPLVHTWLRSEIGLLSPFV
Ga0070711_1017423721	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKWASEMIWVGCFKSLQSVLPEPRSTDAPLAVHTWVRTEIGLITPLVDWLMSLIVGS
Ga0066692_106287652	3300005555	Soil	MIWVGSFKSLQTVLGKPRFTGAPLDVHTWVRSEIALISPLVDWLMNLIAT
Ga0066704_106525431	3300005557	Soil	MIWVGSFKSLHSALRKPRFTAAPLEVHTWLRSDIGLISPFVDWLISLIAESRCV
Ga0070766_101993431	3300005921	Soil	MIWVGNFKSLQSVLDKPRSGAPLEVHTWLRSETGLISPFADWLMSLIVRSGCVPGKE
Ga0070716_1008888711	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MIWVGSFKSLRSALHKPRFGAPLEVHTWLRSDIGLIS
Ga0070716_1011478272	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MIWIGSFKSLQSALHKPRLGAALEVHTWLRSEIGLISPFVDKTLQPG*
Ga0079220_104743491	3300006806	Agricultural Soil	MIWVGSFKSLQTVLDKHRFTRAPLDVHTWVRNEIALISPLVDWLMNLIATSHCV
Ga0075434_1006203932	3300006871	Populus Rhizosphere	MVWVGSFKSLQTVLGKHRFTGAPLDVHTWVRSEIVLISPLVDWLMNLIATSHCV
Ga0099791_101646192	3300007255	Vadose Zone Soil	MIWVGSFKSLQLKLPKLRLTDAPLEVHTWVQSEIGQISPL
Ga0099791_102160141	3300007255	Vadose Zone Soil	MIWVGSFKSLQTVLGKHRFTGAPLDVHTWVRSEIALISPLVDW
Ga0099791_104080932	3300007255	Vadose Zone Soil	MIRVGNFKSPQSALDKPPGGAPLEVQTWLRSETSQISPFADWLMSLIARSGC
Ga0099794_101153051	3300007265	Vadose Zone Soil	MIWVGSFKSLQSALDKPRFAVPLEVHTWLPSDIGLISPFVDWLISLIAESRC
Ga0099794_102249862	3300007265	Vadose Zone Soil	MIWVGSFKSLQAVLGKPRFTGTPLDVHTWVRSEVALIS
Ga0099794_107237111	3300007265	Vadose Zone Soil	MIWVGSFKSLQSALDKPRFAVPLKVHTWLPSDIGLISPFVDWLISLIAESR
Ga0099829_115472371	3300009038	Vadose Zone Soil	MIWVGGFQSLQAALRKPRFTGDSLEVHTWLRSEIALISP
Ga0099829_115636032	3300009038	Vadose Zone Soil	MIWVGSFKSLQSALHKPRLSAPLEVHTWLRSEIVLISPFVDWL
Ga0099828_101201491	3300009089	Vadose Zone Soil	MIWVGSFQSLQTVLGKPRFTGAPLDVHTWVRSEIALISPLVDWLMNLIATS
Ga0126384_106754671	3300010046	Tropical Forest Soil	MTWVGNFKSLQTVHGKHRFTGAPLDVHTWVRSEIALISPLVDWL
Ga0134084_101510671	3300010322	Grasslands Soil	MIWVGNFKSLQTVLGKPRFTGAPLDVHTWVRTEIALISPLVDWLMNLIATSHCVC
Ga0126372_118163352	3300010360	Tropical Forest Soil	VICVGSFKSLESLLDKSRFTGAPFEVRTWVGSDTRLISPLVDW
Ga0150983_158518252	3300011120	Forest Soil	MIWVGSFKSLQSALDKPRFGAPLEVHTWLRSEIGLISPFVSAHERVPR*
Ga0137392_100278134	3300011269	Vadose Zone Soil	MTWVGSFRSLESVVRKADFTNAPLELHTWVRSESGLISP
Ga0137392_101360831	3300011269	Vadose Zone Soil	MIWVGSFKSLQSALDKPRFGAALEVHTWLRSEIGLISPFVDWLM
Ga0137392_103348951	3300011269	Vadose Zone Soil	MIWVGSFKSLQSMLPKLRFTDALLEVHTWVQSEIGQ
Ga0137389_101497121	3300012096	Vadose Zone Soil	MTWVGSFKSLRSVLPEPSFCAPLGVHTWLESEIDLISPFVDWL
Ga0137388_110604241	3300012189	Vadose Zone Soil	MIWVGSFKSLQSALDKPRFGAALEVHTWLRSEIGLISP
Ga0137399_105999623	3300012203	Vadose Zone Soil	MIWVGNFKSLQSALDKPPSGAPLEVHTWLRSEIDLISPFVDWLISLIARS
Ga0137399_116853011	3300012203	Vadose Zone Soil	MIWVGSFKSLRSVLHKRRFITAPLKVHTWVGSEIGLISPL
Ga0137362_100512885	3300012205	Vadose Zone Soil	MIWVGSFKSLQPALREPRLPGAPLEVHTWLRSEIGLISP
Ga0137360_101558724	3300012361	Vadose Zone Soil	MIWVGNFKSLQLVLHKPRFGAPLEVHTWLRSETGLISPFA
Ga0137361_100563245	3300012362	Vadose Zone Soil	MIWVGSFKSLQSMLPKLRFTDAPLEVHTWVQSEIGQISPLVDWLI
Ga0137358_106486791	3300012582	Vadose Zone Soil	MTWVGSFKSLQPVLSKIDLTDAPLELHSWVRSEIGLISPLVDWLMSLI
Ga0137395_111778242	3300012917	Vadose Zone Soil	MIWVGSFESLRSALPKPRFGAPLEVHTWLPSDIGLISPFVDWLISLIAESRCVRGKE
Ga0137396_100441251	3300012918	Vadose Zone Soil	MTWVGSFKSLQSVLGKFDFTDAPLELHSWVRSEIGLISPL
Ga0137394_109483581	3300012922	Vadose Zone Soil	MIWVGSFKSLQSMLPKLRFTDAPLEVHTWVQSEIGQISPLVDWL
Ga0137359_107934461	3300012923	Vadose Zone Soil	MIWVGSFKPLQSALAKLDFTDAPLEVDTWVRSEIGLISPL
Ga0137416_101405421	3300012927	Vadose Zone Soil	MLWVGNFKSLQSVLDKPSSGGPLEVHTWLRSETGLISPLVDWLMSLVARSGCV
Ga0137416_103858731	3300012927	Vadose Zone Soil	MIWVGSFKSLQTVLGKPRFTGAPLDVHTWVRSEIALISPLV
Ga0137416_111388751	3300012927	Vadose Zone Soil	MSWVGSFKSLQSMPPELRFTDAPLEVHTWMPSEIGLISPLVDWLM
Ga0137407_105338551	3300012930	Vadose Zone Soil	MIWVGSFKSLQSALGKFDFTDAPLELHTWVRSEIGLISPLVDW
Ga0137410_102797831	3300012944	Vadose Zone Soil	MIWVGNFKSLQSALDKPSSGAPLEVHTWLRSETGLISPLVDWLMSLVARSGCV
Ga0164303_100791702	3300012957	Soil	MIWIGSFKPLQSALARLDFTDAPLEVDTWVRSEIGLISPLVDWLMSLIAV
Ga0137411_10043822	3300015052	Vadose Zone Soil	MIWVGSFKSLQSMLPKLRFTDAPLEVHTWVQSEIGQI
Ga0137405_137824310	3300015053	Vadose Zone Soil	LVGSFKSLQSMLPKLRFTDAPLEVHTWVQSEIGQISPLVDGL*
Ga0137420_14417283	3300015054	Vadose Zone Soil	MIWVGSFKSLQSARHKPRFGAPLEVHTWLRSETGLISP
Ga0137409_106898334	3300015245	Vadose Zone Soil	MIRVGNFKSPQSALDKPPAGAPLEVQTLLRSETSQISPFADWLMSL
Ga0182036_114314512	3300016270	Soil	KEGAKMVWVGSFKSLQAVLSRPRLMNAPIEVHTRVPTNIGLISPLVD
Ga0137408_10827274	3300019789	Vadose Zone Soil	MIWVGSFNSLQSALHRPPFGTALEVHTWLRSETGLISPFADWLMSVVARSGC
Ga0179594_100687531	3300020170	Vadose Zone Soil	MIWVGSFKSLQLALRKPRFPGAPLEVHTWLRSEIGLI
Ga0210407_101853691	3300020579	Soil	MIWVGSFKSLQLILPEIRFADAPLEVRTWVRSEIGLLSPLVEWLMSLIVAS
Ga0210407_102463181	3300020579	Soil	MIWVGSFKSLQSALDKPRFGAPLEVHTWLRSEIGLISPFVSAHERVPR
Ga0210401_105676784	3300020583	Soil	MIWVGSFKSLRSALHKPRFGAPLEVLTWLRSDIGL
Ga0215015_107619542	3300021046	Soil	MIWVGSFKSLQSRLPELRSADAPLEVHTWVHSEIGLISPLVEGL
Ga0210405_109120342	3300021171	Soil	MIWVGSFQSLRSAPRKPRFRAPLKVHTWLRSEIDL
Ga0210408_104056111	3300021178	Soil	MIWVGSFKSLRSALHKPRFGAPLEVHTWLRSDIGLISPFVDWLMSLVAR
Ga0210396_113206971	3300021180	Soil	MIWVGNFKSLHSVLNKPRFTEDSLEVHTWLRSEIALIS
Ga0210393_116301012	3300021401	Soil	MIWVGSFKSLQSALDKPRFAVPLEVHTWLPSDIGL
Ga0210386_111864072	3300021406	Soil	MIWVGSFKSLQSALDKPRLGAPLEVHTWLRSETGLISPFVDWLMSLIARSGCV
Ga0210390_105597093	3300021474	Soil	MIWVGSFQSLRSAPRKPRFRAPLKVHTWLRSEIDLISPF
Ga0210392_111051681	3300021475	Soil	MVWVGNFKSLQSALDKPSSGAPLEVHTWLRSEIGLIS
Ga0210402_100196036	3300021478	Soil	MIWVGSFKSLQKALGKPRFTDAPLQVHTWLRSEIALISPFTGWLMRVIAGYRGL
Ga0210410_1000090822	3300021479	Soil	MIWVGSFKSLQSVLPEPRSTDAPLAVHTWVRSEIGLITPLVDWLMSLIAGETPISTFPF
Ga0210409_107986083	3300021559	Soil	MLWVGDFKSLQSALEKPRSGAPLGVHTWLRSETDLISPLA
Ga0137417_12744381	3300024330	Vadose Zone Soil	MIWVGSFKSLRSALRERRFITAPLEVHTWLRRSEIG
Ga0207699_102938834	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MIWIGSFKSLQSALHKPRLGAALEVHTWLRSEIGLISPFVDKTLQPG
Ga0207684_107114041	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVWVGSFKSLQSALHRPRFRGAPLEVHTWVGTDIGLISSLVDWLMSLIAA
Ga0209131_13234182	3300026320	Grasslands Soil	MIWVGSFKSLQSAVHRPPFGAALEVHTWLHSETGLIS
Ga0209687_11624551	3300026322	Soil	VICIGSFKSLESLLDKPQFTGAPFEVRTWVGSDTRLISPLVDWLMNL
Ga0257171_10120453	3300026377	Soil	MIWVGSFKSLQSALDKPRFAVPLEVHTWLPSDIGLISPFVDWLISLI
Ga0257178_10133621	3300026446	Soil	MIWVGSFKSLQSALDKPRFAVPLEVHTWLPSDIGLISPFVD
Ga0257161_10966231	3300026508	Soil	MIWVGSFKSLRSALHKRRFITAPLKVHTWVGSEIGLISPLVDWLMSLIARSRCV
Ga0257158_10107351	3300026515	Soil	MVWVGNFKSLQSALDKPSSGAPLEVHTWLRSEIGLI
Ga0209160_11265191	3300026532	Soil	MIWVGSFKSLHSALRKPRFTAAPLEVHTWLRSDIGLISPFVDWLISLIAESRC
Ga0208241_10704462	3300027297	Forest Soil	MIWVGSFKSLQLVLPEPRSTDAPLAVHTWVRSEIGLITPLVDWLMSLIAGETPISTFPF
Ga0209523_11057641	3300027548	Forest Soil	MIWVGSFKSLRSALHKPRFGAPLEVHTWLRSDIGLISPFVD
Ga0209446_10012051	3300027698	Bog Forest Soil	MTWVGSFKSLQAVLPEPSFGAPLKVHTWLRSEIDLISP
Ga0209446_11172512	3300027698	Bog Forest Soil	MTWVGSFKSLQAVLPEPSFGAPLKVHTWLRSEIDLISPFVDWLMSLIDQSRCVDG
Ga0209772_100626931	3300027768	Bog Forest Soil	MVWVGNFKSLQSALDKPSSGAPLEVHTWLRSEIGLISPFVDWLMSLIA
Ga0209180_100867603	3300027846	Vadose Zone Soil	MIWVGSFQSLQSALPKPRFTGDPLEVHTWLRSEIALISPFVDWLMSLR
Ga0209180_104866402	3300027846	Vadose Zone Soil	MIWVGSFKSLQSALDKPRFAAPLEVHTWLPSDIGLISP
Ga0209169_101160673	3300027879	Soil	MVWVGNFKSLQSALDKPSSGAPLEVHTWLRSEIGLISPFVDWLMS
Ga0209526_106688602	3300028047	Forest Soil	MSWLGSFKSLQTVLGKHRFTSAPLDVHTWVRSEIALISPLVDWLMSL
Ga0170824_1139781771	3300031231	Forest Soil	MLWVGNFKSLQSALDKPSFDAPLEVHTWVRSEIGLISPLVGWLMSL
Ga0170824_1160849802	3300031231	Forest Soil	MIGVGSFKSLHTVLDKHRFTGAPLYVQTWVRSEIALISPPVDWLTNLVAS
Ga0310686_1062297381	3300031708	Soil	MIWVGSFKSLQSALHKPSVGAPLEVHTWLRSEIVLISPFVDWLMSLIARSRCVG
Ga0307476_104367644	3300031715	Hardwood Forest Soil	MIWVGSFKSLRSALHKPRFGAPLEVHTWLRSDIGLISPFVDWLMSLVARTGCVP
Ga0307477_100438314	3300031753	Hardwood Forest Soil	MTWVGSFKSLQSVLRRPRFTGAPLEVRTWVRSEIALISPLVDWLMTLIAA
Ga0307475_100402205	3300031754	Hardwood Forest Soil	MIWVGSFKSLRSALREPRFPGAPLVVHTWLRSEIGLISPLVDWLMSLITASR
Ga0307475_101613913	3300031754	Hardwood Forest Soil	MIWVGNFKSLQSALDKPPSGAPLEVHTWLRSEIDLISPFVDWLISLIARSACVPG
Ga0307475_104961381	3300031754	Hardwood Forest Soil	MIWVGSFNSLRSALHKRRFLNAPLKVHTWAPSEIGLI
Ga0307478_107226941	3300031823	Hardwood Forest Soil	MIWVGSFKSLQAVLPKRGFIRAPLGVHTWLRSEIRLI
Ga0307470_113012302	3300032174	Hardwood Forest Soil	MIWIGSFKPLQSALARLDFTDAPLEVDTWVRSEIGLISPLGDWLMSLIAVS
Ga0307471_1005521631	3300032180	Hardwood Forest Soil	MIWVGSFKSLQSALGKFDFTDVPLELHTWVRSEIGLISPLVDWLMSLIAGSRCVF
Ga0307471_1037981411	3300032180	Hardwood Forest Soil	MIWVGSFKSLQSRLPKLPFTDAPLEVRTWVQSEIGQISPLVDWLMNLIAAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097898

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences