NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F097892

Metagenome Family F097892

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F097892
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 65 residues
Representative Sequence MRPPFEVELWKPVDDTPHLLAVTVSFEAAEKAYQEAVANLRLGEVVRVRDAVGTLLLSTDANE
Number of Associated Samples 59
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 61.54 %
% of genes near scaffold ends (potentially truncated) 34.62 %
% of genes from short scaffolds (< 2000 bps) 95.19 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction Yes
3D model pTM-score0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (71.154 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil
(30.769 % of family members)
Environment Ontology (ENVO) Unclassified
(52.885 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(79.808 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 14.29%    β-sheet: 25.27%    Coil/Unstructured: 60.44%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.76
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Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.73.1.1: RuBisCO, small subunitd4f0hb_4f0h0.70559
d.73.1.1: RuBisCO, small subunitd1wdds_1wdd0.69793
d.73.1.1: RuBisCO, small subunitd1svdm11svd0.68097
d.61.1.1: tRNA splicing product Appr>p cyclic nucleotide phosphodiesterased1jh6a_1jh60.65931
d.177.1.1: FAHd1hyoa21hyo0.65478


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF06411HdeA 4.81
PF08312cwf21 2.88
PF00027cNMP_binding 0.96
PF03729DUF308 0.96
PF06863DUF1254 0.96
PF08570DUF1761 0.96
PF00239Resolvase 0.96
PF00034Cytochrom_C 0.96
PF02769AIRS_C 0.96
PF12698ABC2_membrane_3 0.96
PF00067p450 0.96
PF00036EF-hand_1 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.96
COG2124Cytochrome P450Defense mechanisms [V] 0.96
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.96
COG3247Acid resistance membrane protein HdeD, DUF308 familyGeneral function prediction only [R] 0.96
COG5361Uncharacterized conserved proteinMobilome: prophages, transposons [X] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A71.15 %
All OrganismsrootAll Organisms28.85 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000579|AP72_2010_repI_A01DRAFT_1030037Not Available786Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10087868Not Available774Open in IMG/M
3300000651|AP72_2010_repI_A10DRAFT_1027548Not Available728Open in IMG/M
3300004463|Ga0063356_102391521Not Available808Open in IMG/M
3300004633|Ga0066395_11038565Not Available501Open in IMG/M
3300005332|Ga0066388_100709790All Organisms → cellular organisms → Bacteria1611Open in IMG/M
3300005332|Ga0066388_100723685Not Available1599Open in IMG/M
3300005332|Ga0066388_101541089All Organisms → cellular organisms → Bacteria → Proteobacteria1165Open in IMG/M
3300005332|Ga0066388_102472409All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales943Open in IMG/M
3300005332|Ga0066388_103325585Not Available821Open in IMG/M
3300005332|Ga0066388_103547343Not Available796Open in IMG/M
3300005332|Ga0066388_103800829Not Available770Open in IMG/M
3300005332|Ga0066388_104455002Not Available713Open in IMG/M
3300005332|Ga0066388_104731044Not Available692Open in IMG/M
3300005332|Ga0066388_105139505All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium664Open in IMG/M
3300005332|Ga0066388_106697704Not Available580Open in IMG/M
3300005332|Ga0066388_106877995Not Available572Open in IMG/M
3300005332|Ga0066388_106997653Not Available567Open in IMG/M
3300005713|Ga0066905_100438528All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1070Open in IMG/M
3300005764|Ga0066903_100218871All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2883Open in IMG/M
3300005764|Ga0066903_100783558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1701Open in IMG/M
3300005764|Ga0066903_100908923All Organisms → cellular organisms → Bacteria1594Open in IMG/M
3300005764|Ga0066903_101235010All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1390Open in IMG/M
3300005764|Ga0066903_102064456All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1096Open in IMG/M
3300005764|Ga0066903_102127934Not Available1080Open in IMG/M
3300005764|Ga0066903_103763761Not Available815Open in IMG/M
3300005764|Ga0066903_103932432All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae797Open in IMG/M
3300005764|Ga0066903_104501310Not Available743Open in IMG/M
3300005764|Ga0066903_104943162Not Available708Open in IMG/M
3300005764|Ga0066903_105342230Not Available679Open in IMG/M
3300005764|Ga0066903_106612775Not Available603Open in IMG/M
3300005764|Ga0066903_107970259Not Available544Open in IMG/M
3300005764|Ga0066903_108501129Not Available523Open in IMG/M
3300006173|Ga0070716_100983262Not Available666Open in IMG/M
3300006852|Ga0075433_11546436Not Available573Open in IMG/M
3300006854|Ga0075425_100874945Not Available1028Open in IMG/M
3300009148|Ga0105243_13060136Not Available507Open in IMG/M
3300009162|Ga0075423_10737225Not Available1041Open in IMG/M
3300009553|Ga0105249_11493335Not Available748Open in IMG/M
3300009792|Ga0126374_11893016Not Available501Open in IMG/M
3300010048|Ga0126373_12313957Not Available598Open in IMG/M
3300010048|Ga0126373_12830737Not Available541Open in IMG/M
3300010359|Ga0126376_12317840Not Available583Open in IMG/M
3300010360|Ga0126372_10170491All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1771Open in IMG/M
3300010360|Ga0126372_12911939Not Available530Open in IMG/M
3300010361|Ga0126378_12669682Not Available570Open in IMG/M
3300010362|Ga0126377_12389618Not Available605Open in IMG/M
3300010362|Ga0126377_12784096Not Available564Open in IMG/M
3300010366|Ga0126379_12593962Not Available605Open in IMG/M
3300010376|Ga0126381_104122250Not Available564Open in IMG/M
3300010376|Ga0126381_104991153All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → Mucilaginibacter conchicola509Open in IMG/M
3300012951|Ga0164300_10964863Not Available545Open in IMG/M
3300012958|Ga0164299_10972228All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloligella → Methyloligella halotolerans623Open in IMG/M
3300012960|Ga0164301_11332356All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium583Open in IMG/M
3300012971|Ga0126369_10172116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2060Open in IMG/M
3300012971|Ga0126369_11343593Not Available805Open in IMG/M
3300012971|Ga0126369_12221832Not Available636Open in IMG/M
3300012971|Ga0126369_13079028Not Available546Open in IMG/M
3300012984|Ga0164309_10671450Not Available818Open in IMG/M
3300012986|Ga0164304_11144152Not Available625Open in IMG/M
3300013306|Ga0163162_10395272All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1515Open in IMG/M
3300016270|Ga0182036_10292211Not Available1236Open in IMG/M
3300016270|Ga0182036_11491747All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria567Open in IMG/M
3300016294|Ga0182041_10931834Not Available782Open in IMG/M
3300016319|Ga0182033_11770441Not Available560Open in IMG/M
3300016341|Ga0182035_10866724Not Available795Open in IMG/M
3300016341|Ga0182035_10891328Not Available784Open in IMG/M
3300016357|Ga0182032_12028848Not Available505Open in IMG/M
3300016371|Ga0182034_11036836Not Available709Open in IMG/M
3300016387|Ga0182040_11278381Not Available619Open in IMG/M
3300016404|Ga0182037_10507969All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300016404|Ga0182037_10564531Not Available962Open in IMG/M
3300017959|Ga0187779_10026879All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3298Open in IMG/M
3300021560|Ga0126371_10553842Not Available1299Open in IMG/M
3300021560|Ga0126371_10898032Not Available1030Open in IMG/M
3300021560|Ga0126371_13018088Not Available570Open in IMG/M
3300026945|Ga0207743_1030287All Organisms → cellular organisms → Bacteria → Proteobacteria547Open in IMG/M
3300027703|Ga0207862_1044967Not Available1330Open in IMG/M
3300027874|Ga0209465_10023695All Organisms → cellular organisms → Bacteria → Proteobacteria2845Open in IMG/M
3300028592|Ga0247822_11698642Not Available537Open in IMG/M
3300031170|Ga0307498_10167874Not Available742Open in IMG/M
3300031719|Ga0306917_10858855Not Available711Open in IMG/M
3300031744|Ga0306918_10340111All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1163Open in IMG/M
3300031744|Ga0306918_10829715Not Available721Open in IMG/M
3300031744|Ga0306918_11089817All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria619Open in IMG/M
3300031897|Ga0318520_11032889Not Available520Open in IMG/M
3300031910|Ga0306923_10384817Not Available1598Open in IMG/M
3300031942|Ga0310916_10214351Not Available1615Open in IMG/M
3300031942|Ga0310916_10476993All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1063Open in IMG/M
3300031946|Ga0310910_10124496Not Available1945Open in IMG/M
3300031946|Ga0310910_10917004All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria687Open in IMG/M
3300031947|Ga0310909_10398821Not Available1155Open in IMG/M
3300031947|Ga0310909_11243563All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria601Open in IMG/M
3300031954|Ga0306926_10121793Not Available3217Open in IMG/M
3300032001|Ga0306922_10574126All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium1197Open in IMG/M
3300032001|Ga0306922_11885080Not Available586Open in IMG/M
3300032001|Ga0306922_12147359Not Available540Open in IMG/M
3300032035|Ga0310911_10668909Not Available602Open in IMG/M
3300032059|Ga0318533_10857541All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium666Open in IMG/M
3300032060|Ga0318505_10444362Not Available613Open in IMG/M
3300032205|Ga0307472_100472115Not Available1073Open in IMG/M
3300032261|Ga0306920_100566232All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae1683Open in IMG/M
3300032261|Ga0306920_104020522Not Available533Open in IMG/M
3300033289|Ga0310914_10627485Not Available968Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil30.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil21.15%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil18.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.77%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.88%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.88%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.96%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000579Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01EnvironmentalOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000651Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300026945Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 55 (SPAdes)EnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AP72_2010_repI_A01DRAFT_103003723300000579Forest SoilMRPPFKELWKPVDDTPHLLAVYVSFQAAEKAYQEAVADLRVGEVVRVRDALGTLLLSTDTDEDYGW*
AF_2010_repII_A1DRAFT_1008786823300000597Forest SoilMRPPFKVELWKPVDDTPHLLAVYVSFQAAEKAYQEAVADLRVGEVVRVRDALGTLLLSTDTDEDYGW*
AP72_2010_repI_A10DRAFT_102754813300000651Forest SoilPRMRPPFKVELWKPVDDTPHLLAVYVSFQAAEKAYQEAVADLRVGEVVRVRDALGTLLLSTDTDEDYGW*
Ga0063356_10239152123300004463Arabidopsis Thaliana RhizosphereVPYGAEMRPPFEVELWKPVDDSPHLLAVTASFEAAEKAYQEAVANLRLGEVIRVRDAVGTVLLSTDANE*
Ga0066395_1103856523300004633Tropical Forest SoilWKPLDDTPHLLAVKASFEAAKKAYHEAVANLRVGEVVRVRDAVGTLLLSTDANES*
Ga0066388_10070979033300005332Tropical Forest SoilMKPPFKIELWKPVDDTPHLLAVTVSFEAAEKAYQEAVANLRVGDVVRVRDGLGTLLLSTDVE*
Ga0066388_10072368513300005332Tropical Forest SoilTPHLLAVTASFVAAERAYHEAATNLRLGEVVRVRDAVGTLLLSTDANE*
Ga0066388_10154108933300005332Tropical Forest SoilMTPPFKVELWKPVDDTPHLLAVTESFEAAEKVYQEAVANLRVGEVVRVRDAVGTLLLSTDEDDFFVD*
Ga0066388_10247240933300005332Tropical Forest SoilMRPPFEVEVWKPADDTPHLLAVTASFEAAEKAYREAVANLRVGEVVRVRDAVGTLLLSTDANES*
Ga0066388_10332558523300005332Tropical Forest SoilMRPPFTVELWKPVDDKPQLLAITEGFEAAENAYQEAIANLRVGEVVRVRDGLGTLLLSTDEDDLMAD*
Ga0066388_10354734323300005332Tropical Forest SoilMRPPFKVEIWKPVDDTPHLLAVTESFEAAEKAYQEAEANLRVGEVVRVRDGTLLLSTDEDDLFVD*
Ga0066388_10380082913300005332Tropical Forest SoilPAGVGVCVVGAEMRPPFEVELWKPVDDTPHLLAVTASFEAAEKAYQEAIANLRLGEVVRVRDAVGTLLLSTDANE*
Ga0066388_10445500213300005332Tropical Forest SoilMKPPFKVELWKPVDDTPHLLAVRASFQAAEKVYQKAVANLRVGEVVRVRDALGTLLLSTDEDEDYGW*
Ga0066388_10473104413300005332Tropical Forest SoilMRPPFKVELWKPVDDTPHLLAVTESFEAAEKAYQEAVANLRVGEVVRVRDALGTLLLSTDEDDLFVD*
Ga0066388_10513950523300005332Tropical Forest SoilMTPPFKVELWKPVDDTPHLLAVRVSFQAAEKVYQEAVANLRVGEVVRVRDALGTLLLSTDED
Ga0066388_10669770423300005332Tropical Forest SoilLLAVTDSFEDVVKAYHEAVVDIRVGEVVRVRDALGTLLLSTDEDDLLID*
Ga0066388_10687799523300005332Tropical Forest SoilMKPPFKVELWKPVDDTPHLLAVTESFRAAKKAYWEAFANLRVGEVVRVRDSLGTLLLSTDEDEDYGW*
Ga0066388_10699765323300005332Tropical Forest SoilMRPPFEVELWKPVDDTPHLLAVTASFDAAKKAYHEAVANLRVGEVVRLRDAVGTLLLSTDANES*
Ga0066905_10043852823300005713Tropical Forest SoilMRPPFEVELWKPVDDTPHLLAVTASFEAAEKAYQEAIANLRLGEVVRVRDAVGTLLLSTDANE*
Ga0066903_10021887153300005764Tropical Forest SoilMRPPFTVELWKPVDDKPQLLAITEGFEAAQNAYQEAIANLRVGEVVRVRDGLGTLLLSTDEDDLIAD*
Ga0066903_10078355813300005764Tropical Forest SoilMKPPFKIELWKPVDDTPHLLAVTVSFEAAEKAYQEAVANLRVGDVVRVRDGLGTVLLSTDVE*
Ga0066903_10090892313300005764Tropical Forest SoilMRPPFEVELWKPVDDTPHLVAVTASFDAAKKAYHEAVANLRVGEVVRLRDAVGTLLLSTDANES*
Ga0066903_10123501013300005764Tropical Forest SoilMKPPFKVELRKPVDDTPHLLAVTESFEDAVKAYQKALVDIRVGEVVRVRDALGTLLLSTDEDDFFVD*
Ga0066903_10206445613300005764Tropical Forest SoilMRPPFKVELWKPVHDTPHLLAVRVSFEAAEKAYQEAVANLRVGEVVRVRDALGTLLLSTDTEEDYGW*
Ga0066903_10212793413300005764Tropical Forest SoilMRPPFEVELWKPVDDTPHLLAVTASFEAAEKAYHEAVANLRVGEVVRLRDAVGTLLLSTDANES*
Ga0066903_10376376113300005764Tropical Forest SoilMPMSPPFRVELWKPVDDTPHLLAVTESFEDATRVYHEAVVDLRVGEVVRVRDALGTLLLSTDEDDLLID*
Ga0066903_10393243233300005764Tropical Forest SoilGGAEMRPPFKVELWKPVDDTPHLLAVTASFEAAEKAYHEAVANLRVGEVVRVRDAVGTLLLSTDANES*
Ga0066903_10450131013300005764Tropical Forest SoilMRPPFKVELWKPVDDTPHLLAVYVSFQAAEKAYQEAVADLRVGEVVRVRDALGTLLLSTDADEDYGW*
Ga0066903_10494316223300005764Tropical Forest SoilMTPPFKVELWKPVDDTPHLLAVTESFEVAEKAYQEAVANLRLGEVVRVRDALGTLLLSTDEDDL
Ga0066903_10534223023300005764Tropical Forest SoilMPMSPPFRIELLKPADNTARLLAVTDSFGDATRVYHEAVIDLQVGEVVRVWDAEGTLLLSTDEDDLFTD*
Ga0066903_10661277523300005764Tropical Forest SoilFKVELWKPVDDTPHLLAVTESFEAAEKAYQQAEANLRVGEVVRVRDAVGTLLLSTDEDDFFVD*
Ga0066903_10797025913300005764Tropical Forest SoilMTPPFKIELWKPVDDTPHLLAVTVTFEAAEKAYQEAVAILRVGEVVRVRDALGTLLLSTD
Ga0066903_10850112913300005764Tropical Forest SoilAMPMSPPFRVELWKPVDDTPHLLTVTDSFEDAVKAYHEAVVDIRVAEVVRVRDALGTLLLSTDEDDLLID*
Ga0070716_10098326223300006173Corn, Switchgrass And Miscanthus RhizosphereMRPPFKVELWKPVHDTPHVLTVTVSFEAAEKAYQEAVANLRVGEVVRVRDALGTLLLSTDADEDYGW*
Ga0075433_1154643613300006852Populus RhizosphereRPPFEVELWKPVDDTPHLLAVAVSFEAAEKAYQEAVANLRLGEVVRVRDAVGTVLLSTDANE*
Ga0075425_10087494543300006854Populus RhizosphereGAEMRPPFEVELWKPVDDSPHLLAVTASFEAAEKAYQEAVANLRLGEVVRVRDAVGTVLLSTDANE*
Ga0105243_1306013613300009148Miscanthus RhizosphereYGAEMRPSFEVELWKPVDDTPHLLAVTVSFEAAEKAYQEAVANLRLGEVVRVRDAVGTLLLSTDANE*
Ga0075423_1073722533300009162Populus RhizosphereMRPPFEVELWKPVDDTPHLLAVAVSFEAAEKAYQEAVANLRLGEVIRVRDAVGTVLLSTDANE*
Ga0105249_1149333523300009553Switchgrass RhizosphereAEVGFVPYGAEMRPPFEVELWKPVDDTPHLLAVTVSFEAAEKAYQEAVANLRLGEVVRVRDAVGTLLLSTDANE*
Ga0126374_1189301613300009792Tropical Forest SoilMTPPFKVELWKPVDDTPHLLAVRVSFQAAEKVYRKAVANLRVGEVVRVRDALGTLLLSTDEDEDYGW*
Ga0126373_1231395713300010048Tropical Forest SoilELWKPVDDKPQLLAITEGFEAAQNVYQEAIANLRVGEVVRVRDGLGTLLLSTDEDDLIAD
Ga0126373_1283073713300010048Tropical Forest SoilMTPPFKVELWKPVHDTPHLLAVTESFEAAEKAYQEAEANLRVGEVVRVRDALGTLLLSTDEEDFFMD*
Ga0126376_1231784023300010359Tropical Forest SoilMRPPFEVELWKPVDDSPHILAVTASFEAAKKAYQEAIASLRLGEVVRVRDAVGTLLLTTDANE*
Ga0126372_1017049113300010360Tropical Forest SoilVFRHEMTPPFKVELWKPVDDTPHLLAVRVSFQAAEKAYQDAVANLRVGEIVRVRDARGTLLLSTDADDDYGW*
Ga0126372_1291193913300010360Tropical Forest SoilMRPPFEVELWKPVDDTPHLLAVTANFEAAKKAYHEAVANLRVGEVVRVRDAVGTLLLSTDANES*
Ga0126378_1266968223300010361Tropical Forest SoilKPTEDAPHLLAVTESFEHATRVYHEAVLDVRVGEVVRVRDALGTLLLSTDEDDLLID*
Ga0126377_1238961823300010362Tropical Forest SoilMKPPFKVELWKPVDDTPHLLAVRASFQAAEIVYQKAVANLRVGEVVRVRDALGTLLLSTDEDEDYGW*
Ga0126377_1278409623300010362Tropical Forest SoilMEQKMRPPFEVELWKPVDDTPHLLAVTASFEAAEKAYQEAIANLRLGEVVRVRDAVGTLLLSTDANE*
Ga0126379_1259396233300010366Tropical Forest SoilLLAVTESFEDAARAYHGGVVDLRVGEVVRVRDAQGTLLLSTDENDLLID*
Ga0126381_10412225023300010376Tropical Forest SoilMKPPFKVELWKPVDDTPHLLAIRVSFEAAEKAYQKAVANLRVGEVVRVRDALGTLVLSTDTDEDYGW*
Ga0126381_10499115313300010376Tropical Forest SoilRPPFTVELWKRVDDKPHLLAVTEGFEAAQNAYQEAIANLRVGEVVRVRDGLGTLLLSTDEDDLMVD*
Ga0164300_1096486323300012951SoilMRPPFEVELWKPVDDTPHLLAVTVSFEAAEKAYQEAVANLRLGEVVRVRDAVGTLLLSTDANE*
Ga0164299_1097222823300012958SoilMRPPFEVELWKPVDDTRHVLAVTVSFEAAEKAYQEAVANLRLGEVVRVRDAVGTLLLSTDANE*
Ga0164301_1133235623300012960SoilMRPPFEVELWKPVHDTPHLLAVTVSFEAAEKAYQEAVANLRLGEVVRVRDAVGTLLLSTDANE*
Ga0126369_1017211623300012971Tropical Forest SoilLDDTPHLLAVKASFEAAKKAYHEAVANLRVGEVVRVRDAVGTLLLSTDANES*
Ga0126369_1134359313300012971Tropical Forest SoilVGFVPYGAEMRPPFEVELWKPVDDTPHLLAVTASFEAAEKAYQEAEANLRVGEVVRVRDALGTLLLSTDEEDFFMD*
Ga0126369_1222183223300012971Tropical Forest SoilMTPPFKIELWKPVDDTPHLLAVTVTFEAAEKAYQEAVANLRVGEVVRMRDALGTLLLSTDEDDLFVD*
Ga0126369_1307902813300012971Tropical Forest SoilMKPPFKVELWKPVDDTPHLLAVTESFEAAEKAYQQAEANLRVGEVVRVRDAVGTLLLSTDEDDFFVD*
Ga0164309_1067145023300012984SoilMRPPFEVELWKPVDDTRHVLAVTVSFEAAEKAYQEAVANLRLGEVVRLRDAVGTLLLSTDANE*
Ga0164304_1114415223300012986SoilMRPPFEVELWKPVDDSPHLLAVKESFEAAEKAYQEAVDNLRLGEVVRLRDAVGTLLLSTDANE*
Ga0163162_1039527233300013306Switchgrass RhizosphereVDDTPHLLAVTVSFEAAEKAYQEAVVNVRLGEVVRVRDAVGTLLLSTDANE*
Ga0182036_1029221113300016270SoilMRPPFTVELWKPVDDKPHLLAVTEGFEAAENAYQEAIANLRVGEAVRVRDGLGTLLLSTDEDDLMVD
Ga0182036_1149174713300016270SoilDDTPHLLAVTEGFEAAETAYQEAVANLRVGEVVRVRDGLATVLLSTDADEDIGDKA
Ga0182041_1093183413300016294SoilMRPPFTVELWKPVDDKPHLLAVTEGFEAAENAYQEAIANLRVGEVVRVRDGLGTQLLSTDEDDLMAE
Ga0182033_1177044123300016319SoilMRPPFTVELWKPSDDTPHLLAVTEGFEAAETAYQEAVANLRVGEVVRVRDGLGTVLLSTDAEEDIGDKA
Ga0182035_1086672423300016341SoilMRPPFTVELWKPVDDKPHLLAVTEGFEAAQNAYQEAIANLRVGEAVRVRDGLGTLLLSTDEDDLMVD
Ga0182035_1089132823300016341SoilMTPPFKVELWKPVNDTPHLLAVTESFEAAEKVYEAAVANLRVGEVVRVRDALGTLLLSTD
Ga0182032_1202884813300016357SoilTPHLLAVTESFEAAEKVYEAAVANLRVGEVVRVRDALGTLLLSTDEDDFFVD
Ga0182034_1103683613300016371SoilMTPPFKVELWKPVNDTPHLLAVTESFEAAEKAYQEAFAKLRVGEVVRVRDVLGTL
Ga0182040_1127838113300016387SoilMRPPFTVELWKPVDDKPHLLAVTEGFEAAQNAYEEAIAKIRVGEVVRVRDGLGTLLLSTDEDDPIAD
Ga0182037_1050796923300016404SoilMRPPFIVELWKPSDDTPHLLATTEGFEAAENAYQEAIANLRVGEVVRVRDGLGTLLLSTDEDDLIVD
Ga0182037_1056453123300016404SoilMRPPFTVELWKPVDDKPHLLAITEGFEAAENAYQEAIANIRGGEVVRVRDGLGTLLLSTDED
Ga0187779_1002687913300017959Tropical PeatlandMRPPFRIELWKPSDDEPHLVAATASFETATLAYQEAVANIRVGEVVRMRDAVGTLLLSTDCDD
Ga0126371_1055384213300021560Tropical Forest SoilMRPPFTVELWKPVDDKPQLLAITEGFEAAQNAYQEAIANLRVGEVVRVRDGLGTLLLSTDEDDLIAD
Ga0126371_1089803213300021560Tropical Forest SoilDDTPHLLAVYVSFQAAEKAYQEAVADLRVGEVVRVRDALGTLLLSTDADEDYGW
Ga0126371_1301808813300021560Tropical Forest SoilMRPPFEVELWTPVDDTPHLVAVTASFDAAKKAYHEAVANLRVGEVVRVRDAVGTLLLSTDANES
Ga0207743_103028723300026945Tropical Forest SoilELWKPVDDSPHLLAVTASFEAAEKAYLEAVADLRVGEVVRVRDAVGTLLLSTDADE
Ga0207862_104496723300027703Tropical Forest SoilVPYGAEMKPPFEVELWKPVDDSPHLLAVTASFEAAEKAYLEAVADLRVGEVVRVRDAVGTLLLSTDADE
Ga0209465_1002369553300027874Tropical Forest SoilMRPPFTVELWKPVDDKPQLLAITEGFEAAENAYQEAIANLRVGEVVRVRDGLGTLLLSTDEDDLMAD
Ga0247822_1169864213300028592SoilMRPPFEVELWKPVDDTPHLLAVTVSFEAAEKAYQEAVANLRLGEVVRVRDAVGTLLLSTDANE
Ga0307498_1016787433300031170SoilMRPPIEVELWKPVDNTRHVLAVTVSFEAAEKAYQEAVANLRLGEVVRLRDAVGTLLLSTNIAKPTLLSKTE
Ga0306917_1085885523300031719SoilMRPPFEVELWKPVDDSPHLLAVTASFEAAEKAYHEAVANLRLGEVVRVRDAVGTLLLSTDANE
Ga0306918_1034011113300031744SoilVPYGAEMRPPFEVELWKPVDDSPHLLAVTASFEAAEKAYHEAVANLRLGEVVRVRDAVGTLLLSTDANE
Ga0306918_1082971523300031744SoilMRPPFSVELWKPVDDTPHFLAITVNFEAAKKAYQEAVANLRVGEVVRMRDAVGTLLLSTDADE
Ga0306918_1108981713300031744SoilFKVGREMRPPFTVELWKPSDDTPHLLAVTEGFEAAETAYQEAVANLRVGEVVRVRDGLATVLLSTDADEDIGDKA
Ga0318520_1103288913300031897SoilMRPPFEVELWKPVDDSPHLLAVTASFEAAEKAYHEAVANLRLGEVVRVRDAVGTLLLS
Ga0306923_1038481723300031910SoilMRPPFTVELWKPVDDKPHLLAITEGFEAAENAYQEAIANIRGGEVVRVRDGLGTLLLSTDEDDLMAD
Ga0310916_1021435143300031942SoilVPYGAEMRPPFEVELWKPVDDSPHLLAVTASFEAAEKAYQEAVANVRLGEVVRVRDAVGTLMLSTDANDSLE
Ga0310916_1047699313300031942SoilMRPPFTVELWKPSDDTPHLLAVTEGFEAAETAYQEAVANLRVGEVVRVRDGLATVLLSTDADEDIGDKA
Ga0310910_1012449633300031946SoilMRPPFKIELWKPVDDTPHFLAITVNFEAAKKAYQEAVANLRVGEVVRMRDAVGTLLLSTDADE
Ga0310910_1091700423300031946SoilPSDDTPHLLAVTEGFEAAETAYQEAVANLRVGEVVRVRDGLATVLLSTDADEDIGDKA
Ga0310909_1039882113300031947SoilMRPPFTVELWKPVDDKPHLLAVTEGFEAAENAYQEAIANLRVGEVVRVRDGLGTLLLSTDKDDLIAD
Ga0310909_1124356313300031947SoilPFTVELWKPSDDTPHLLAVTEGFEAAETAYQEAVANLRVGEVVRVRDGLATVLLSTDADEDIGDKA
Ga0306926_1012179353300031954SoilMTPPFKVELWKPVDDTPHLLAVTERFDAAEKAYQEAFANLRVGEVVRVRGALGTLLLSTDADEDYGW
Ga0306922_1057412623300032001SoilMRPPFTVELWKPVDDKPQLLAVTEGFEAAENAYQEAIANIRVGEVVRVRDGLGTLLLSTDEDDLMAD
Ga0306922_1188508013300032001SoilRTKHAEVGFVPYGAEMRPPFEVELWKPVDDSPHLLAVTASFEAAEKAYHEAVANLRLGEVVRVRDAVGTLLLSTDANE
Ga0306922_1214735913300032001SoilVELWKPVNDTPHLLAVTESFEAAEKVYEAAVANLRVGEVVRVRDALGTLLLSTDEDDFFV
Ga0310911_1066890923300032035SoilMRPPFTVELWKPVDDKPHLLAVTEGFEAAENAYQEAIANLRVGEVVRVRDGLGTLLLSTDEDDLTVD
Ga0318533_1085754113300032059SoilMRPPFTVELWKPVDDKPQLLAVTEGFEAAENAYQEAIANIRVGEVVRVRDGLGTL
Ga0318505_1044436223300032060SoilMRPPFRVELWKPVDDTPHFLAITVNFEAAKKAYQEAVANLRVGEVVRMRDAVGTLLLSTDADE
Ga0307472_10047211513300032205Hardwood Forest SoilVAYGAEMSPPFEVELWKPVDDTPHLLAVTVSFEAAEKAYQKAVANLRLGEVVRVRDAVGTLLLSTDANE
Ga0306920_10056623223300032261SoilMRPPFTVELWKPVDDKPHLLAVTEGFEAAENAYQEAIANLRVGEVVRVRDGLGTQLLSTDEDDLMAD
Ga0306920_10402052213300032261SoilMTPPFKVELWKPVNDTPHLLAVTESFEAAEKVYEAAVANLRVGEVVRVRDALGTLLLSTDEDDFFVD
Ga0310914_1062748523300033289SoilNAGHEMRPPFTVELWKPVDDKPQLLAVTEGFEAAENAYQEAIANIRVGEVVRVRDGLGTLLLSTDEDDLMAE


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