Metagenome Family F097891

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097891
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	41 residues
Representative Sequence	AFAPPFNVHGTAHLSPSQPLGFTAAFPKREIQLGARFSF
Number of Associated Samples	93
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.94 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.731 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.346 % of family members)
Environment Ontology (ENVO)	Unclassified (33.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.692 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.15
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.15
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00106	adh_short	15.38
PF00326	Peptidase_S9	7.69
PF13847	Methyltransf_31	6.73
PF12867	DinB_2	3.85
PF00501	AMP-binding	2.88
PF13561	adh_short_C2	1.92
PF00107	ADH_zinc_N	1.92
PF13181	TPR_8	1.92
PF07519	Tannase	1.92
PF00561	Abhydrolase_1	0.96
PF00924	MS_channel	0.96
PF04185	Phosphoesterase	0.96
PF13538	UvrD_C_2	0.96
PF02353	CMAS	0.96
PF12697	Abhydrolase_6	0.96
PF08386	Abhydrolase_4	0.96
PF00069	Pkinase	0.96
PF13424	TPR_12	0.96
PF09723	Zn-ribbon_8	0.96
PF02776	TPP_enzyme_N	0.96
PF13414	TPR_11	0.96
PF03446	NAD_binding_2	0.96
PF05199	GMC_oxred_C	0.96
PF01494	FAD_binding_3	0.96
PF02771	Acyl-CoA_dh_N	0.96
PF01575	MaoC_dehydratas	0.96
PF02737	3HCDH_N	0.96
PF09957	VapB_antitoxin	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.85
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.92
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.96
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.96
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.96
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.96
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.96
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.96
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.96
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.96
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.96
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.96
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.96
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.96
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.96
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.96
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.73 %
Unclassified	root	N/A	18.27 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.73 %
Unclassified	root	N/A	18.27 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.73 %
Unclassified	root	N/A	18.27 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	37.50 %
Unclassified	root	N/A	18.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.27 %
Unclassified	root	N/A	18.27 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.92 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1.92 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.27 %
Unclassified	root	N/A	18.27 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.92 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	1.92 %
Caldilineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae	0.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.27 %
Unclassified	root	N/A	18.27 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1.92 %
unclassified Caldilineae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae	0.96 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.96 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.96 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.27 %
Unclassified	root	N/A	18.27 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
Caldilineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	0.96 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.96 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.27 %
Unclassified	root	N/A	18.27 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
Caldilineae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	0.96 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.96 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_119832016	All Organisms → cellular organisms → Bacteria → Acidobacteria	787	Open in IMG/M
3300005181\|Ga0066678_10820764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300005186\|Ga0066676_10915832	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005440\|Ga0070705_100801824	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300005531\|Ga0070738_10231687	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005540\|Ga0066697_10419513	Not Available	775	Open in IMG/M
3300005547\|Ga0070693_101339635	Not Available	554	Open in IMG/M
3300005554\|Ga0066661_10246221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1106	Open in IMG/M
3300005554\|Ga0066661_10335789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	927	Open in IMG/M
3300005568\|Ga0066703_10436049	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300005591\|Ga0070761_10013761	All Organisms → cellular organisms → Bacteria	4525	Open in IMG/M
3300005602\|Ga0070762_10833944	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300005764\|Ga0066903_101736694	All Organisms → cellular organisms → Bacteria → Acidobacteria	1189	Open in IMG/M
3300005764\|Ga0066903_107658499	Not Available	556	Open in IMG/M
3300005921\|Ga0070766_10551120	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300006028\|Ga0070717_11838555	Not Available	547	Open in IMG/M
3300006173\|Ga0070716_101008908	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006176\|Ga0070765_100679213	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300006797\|Ga0066659_10654418	Not Available	856	Open in IMG/M
3300006800\|Ga0066660_10269051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1343	Open in IMG/M
3300006800\|Ga0066660_10319310	All Organisms → cellular organisms → Bacteria	1248	Open in IMG/M
3300007076\|Ga0075435_100062753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	3016	Open in IMG/M
3300009038\|Ga0099829_11382698	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300009088\|Ga0099830_11368679	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300009088\|Ga0099830_11813758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300009137\|Ga0066709_103428483	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300009792\|Ga0126374_11677925	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300010048\|Ga0126373_11357443	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	776	Open in IMG/M
3300010048\|Ga0126373_11762463	Not Available	683	Open in IMG/M
3300010326\|Ga0134065_10015977	All Organisms → cellular organisms → Bacteria	2061	Open in IMG/M
3300010361\|Ga0126378_12364134	Not Available	607	Open in IMG/M
3300010366\|Ga0126379_10020245	All Organisms → cellular organisms → Bacteria	4968	Open in IMG/M
3300010376\|Ga0126381_102284253	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300010376\|Ga0126381_103172123	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010379\|Ga0136449_100909914	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300010398\|Ga0126383_13255557	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300011270\|Ga0137391_10064834	All Organisms → cellular organisms → Bacteria	3131	Open in IMG/M
3300011271\|Ga0137393_11258108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300011436\|Ga0137458_1045315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Caldilineae → unclassified Caldilineae → Caldilineae bacterium	1168	Open in IMG/M
3300012096\|Ga0137389_11209477	All Organisms → cellular organisms → Bacteria → Acidobacteria	647	Open in IMG/M
3300012180\|Ga0153974_1171913	Not Available	516	Open in IMG/M
3300012201\|Ga0137365_10412223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300012203\|Ga0137399_11316635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300012211\|Ga0137377_11350754	All Organisms → cellular organisms → Bacteria → Acidobacteria	642	Open in IMG/M
3300012361\|Ga0137360_10084818	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300012929\|Ga0137404_11323524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300012930\|Ga0137407_10205100	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300012930\|Ga0137407_11373108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	671	Open in IMG/M
3300012931\|Ga0153915_12440146	Not Available	612	Open in IMG/M
3300012948\|Ga0126375_11139241	Not Available	645	Open in IMG/M
3300013307\|Ga0157372_10582775	All Organisms → cellular organisms → Bacteria → Acidobacteria	1304	Open in IMG/M
3300014501\|Ga0182024_12144112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300015264\|Ga0137403_11033219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300016270\|Ga0182036_10904951	Not Available	723	Open in IMG/M
3300016371\|Ga0182034_11313960	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300016387\|Ga0182040_11983454	Not Available	500	Open in IMG/M
3300017974\|Ga0187777_10375061	Not Available	981	Open in IMG/M
3300017975\|Ga0187782_10880671	Not Available	694	Open in IMG/M
3300017995\|Ga0187816_10539408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300018468\|Ga0066662_11909016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300019888\|Ga0193751_1058051	All Organisms → cellular organisms → Bacteria → Acidobacteria	1632	Open in IMG/M
3300020581\|Ga0210399_11405683	Not Available	545	Open in IMG/M
3300020583\|Ga0210401_10603828	Not Available	959	Open in IMG/M
3300021168\|Ga0210406_10025836	All Organisms → cellular organisms → Bacteria	5384	Open in IMG/M
3300021168\|Ga0210406_10429363	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300021171\|Ga0210405_10891801	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	676	Open in IMG/M
3300021401\|Ga0210393_10022200	All Organisms → cellular organisms → Bacteria	4938	Open in IMG/M
3300021405\|Ga0210387_10243344	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300021432\|Ga0210384_10206025	All Organisms → cellular organisms → Bacteria	1769	Open in IMG/M
3300021432\|Ga0210384_10282629	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300021560\|Ga0126371_13682517	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300024178\|Ga0247694_1013590	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300024295\|Ga0224556_1098559	Not Available	716	Open in IMG/M
3300025915\|Ga0207693_10295210	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300026313\|Ga0209761_1230207	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300026467\|Ga0257154_1055246	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300026552\|Ga0209577_10443641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	908	Open in IMG/M
3300026921\|Ga0207860_1035732	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300027090\|Ga0208604_1003936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1395	Open in IMG/M
3300027684\|Ga0209626_1023215	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300027729\|Ga0209248_10076440	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300027846\|Ga0209180_10575332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300027853\|Ga0209274_10013730	All Organisms → cellular organisms → Bacteria	3639	Open in IMG/M
3300027882\|Ga0209590_10368147	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M
3300027889\|Ga0209380_10454227	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300027910\|Ga0209583_10758300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300028536\|Ga0137415_10248428	All Organisms → cellular organisms → Bacteria → Acidobacteria	1588	Open in IMG/M
3300030007\|Ga0311338_10430278	All Organisms → cellular organisms → Bacteria → Acidobacteria	1406	Open in IMG/M
3300030503\|Ga0311370_11534501	All Organisms → cellular organisms → Bacteria → Acidobacteria	694	Open in IMG/M
3300031028\|Ga0302180_10028861	All Organisms → cellular organisms → Bacteria	3491	Open in IMG/M
3300031446\|Ga0170820_10527878	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300031718\|Ga0307474_10457372	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300031720\|Ga0307469_12019291	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031747\|Ga0318502_10093005	All Organisms → cellular organisms → Bacteria	1661	Open in IMG/M
3300031754\|Ga0307475_10218385	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300031820\|Ga0307473_10404836	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300031945\|Ga0310913_11141672	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300032180\|Ga0307471_102075797	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300032205\|Ga0307472_100134533	All Organisms → cellular organisms → Bacteria → Acidobacteria	1775	Open in IMG/M
3300032261\|Ga0306920_102032850	Not Available	804	Open in IMG/M
3300032261\|Ga0306920_102547938	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300032261\|Ga0306920_103776617	All Organisms → cellular organisms → Bacteria → Acidobacteria	554	Open in IMG/M
3300033513\|Ga0316628_100237562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2221	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.12%
Host-Associated	Host-Associated	2.88%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.31%
Aquatic	Environmental → Aquatic	4.81%
Plants	Host-Associated → Plants	1.92%
Fungi	Host-Associated → Fungi	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.46%
Peat	Environmental → Terrestrial → Peat	3.85%
Freshwater	Environmental → Aquatic → Freshwater	2.88%
Sediment	Environmental → Aquatic → Sediment	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.92%
Mycelium	Host-Associated → Fungi → Mycelium	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.31%
Loam	Environmental → Terrestrial → Soil → Loam	17.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.92%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.58%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.77%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.77%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011436	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024178	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK35	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026921	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 28 (SPAdes)	Environmental	Open in IMG/M
3300027090	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF016 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1198320162	3300002568	Soil	VNNIVGASFAPPFSVHGTAINSPSQPLGFTAAFPKREIQVGIRFDF*
Ga0066678_108207641	3300005181	Soil	IVGAAFAPSFNVHGTASLSPSQPLGFTAALPKREVQLGIRFDF*
Ga0066676_109158321	3300005186	Soil	NNIVGAAFAPPFNVHGTANLSPSQPLGFTAALPKREVQLGIRFDF*
Ga0070705_1008018242	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VIGPPFDLHGNSALSPSQPLGFTSAFPKRQMQLGVRLNF*
Ga0070738_102316873	3300005531	Surface Soil	FNVQGSALLSPSQPLSFTSDFPKREIQLGVRLSF*
Ga0066697_104195131	3300005540	Soil	VLAPPFDLSGSSASSPSKPLGFTSAFLKREIQLGLRLTF*
Ga0070693_1013396351	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	IANRTNYSTVNNVVGAAFVPPFNVRGSAALSPSQGLGYTGALPKREIQLGVRIDF*
Ga0066661_102462211	3300005554	Soil	AFAPPFDVHGTASLSPSQPLGFTAALPKREIQLGVRFDF*
Ga0066661_103357891	3300005554	Soil	RVNNIVGATLAPPFNVHGTSSLPPSQPLGFTAALPEREVQLGIRFDF*
Ga0066703_104360491	3300005568	Soil	LAGAAFAPPFNVRGTSTVSPSQPLGFTAAFPKREVQLGIRFEF*
Ga0070761_100137611	3300005591	Soil	FNVHGSAALSPSQPLGFTSDFPKREIQLGLRVTF*
Ga0070762_108339441	3300005602	Soil	FAPPFNVHGTANVGPSQPLGFTAAFPNREIQLGLRFTF*
Ga0066903_1017366943	3300005764	Tropical Forest Soil	ATFGPPFHAHGTTDLSPSQPLGFTAALAKREIQLGVRFDF*
Ga0066903_1076584992	3300005764	Tropical Forest Soil	FGLPFNPHGTARLSPSQPLGFTAAFPKREIQLGVRLSF*
Ga0070766_105511202	3300005921	Soil	PGFTTFDVHGSKALSPSTPLGFTSALPKREIQLGVRMNF*
Ga0070717_118385551	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PFHLSASSALSPSQPLAYTAALPRREIQLGVHLNF*
Ga0070716_1010089081	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	SVNNIVGAAFAPPFNVHGTAALSPSQALGFTAALPKREVQFGIRFDF*
Ga0070712_1014027101	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GPKVIGSTFNVHGTNTVSPSTPLGFTSAFPMRQLQLGIRIGF*
Ga0070765_1006792132	3300006176	Soil	TGNTSFDVHGSAALSPSQPLGFTSAFPKREIQLGLRITF*
Ga0066659_106544181	3300006797	Soil	LAPGFATFNVHGSRFLSPSQPLGFTSAFPKREIQLGLRLTF*
Ga0066660_102690511	3300006800	Soil	NNIVGATLAPPFNVHGTSSLSPSQPLGFTAALPKREVQLGVRFDF*
Ga0066660_103193103	3300006800	Soil	VNNIVGSAFAPPFSIHGTASLSPSQPLGFTAALPKREVQLGVRFDF*
Ga0075435_1000627531	3300007076	Populus Rhizosphere	SSVNNLVGAAFAPPFNVRGTSVVSPSQPLGFTAALAKREVQLGIRFEF*
Ga0099829_113826981	3300009038	Vadose Zone Soil	AAFAPPFSIHGTASLSPSQPLGFTAAFPKREVQVGIRFDF*
Ga0099830_113686791	3300009088	Vadose Zone Soil	SNRTNYASVNNIVGASFAPPFNVHGTAAVSPSQPRGFTAAFPKREIQLGVRFDF*
Ga0099830_118137581	3300009088	Vadose Zone Soil	APPFSVHGTTTISPSQPLGFTAAFPKREIQVGIHFDF*
Ga0066709_1034284831	3300009137	Grasslands Soil	NIVGAAFAPPFNVHGTANLSPSQPLGFTAALPKREVQLGIRFDF*
Ga0126374_116779251	3300009792	Tropical Forest Soil	TPFNVHGTANLYPNQPLAFTSALPKREIQLGARFEF*
Ga0126373_113574433	3300010048	Tropical Forest Soil	GAAFAPPFNVHGTANVGPSQPLGFTAAFPNREIQLGARLTF*
Ga0126373_117624631	3300010048	Tropical Forest Soil	IVGAAFAPPFNVHGTANLGPSQALGFTAAFPNREIQLGVRFTF*
Ga0134065_100159774	3300010326	Grasslands Soil	VNNIVGAAFAPPFNANGTAGLSPSQPLGFTAALPKREIQLGLRFDF*
Ga0126378_123641342	3300010361	Tropical Forest Soil	GLIPSPFNLSGTSAGPSQPQGFTSALAKREVQLGVRVSF*
Ga0126379_100202455	3300010366	Tropical Forest Soil	GNPTANVHGSATIAPNQPLGFTSAFPMRQIQLGARVVF*
Ga0126381_1022842533	3300010376	Tropical Forest Soil	APPFNVHGTANVGPSQPLGFTAAFPNREIQLGARLTF*
Ga0126381_1031721231	3300010376	Tropical Forest Soil	AAPFNVHGTANVGPSQPLGFTAAFPNREIQLGVRLTF*
Ga0136449_1009099141	3300010379	Peatlands Soil	TFNVHGSSALSPSQPLGFTSAFPKREIQLGVRLTF*
Ga0126383_132555572	3300010398	Tropical Forest Soil	FKVHGSSALSPSQPLGFTSAFPKRQIQLGLRLTF*
Ga0137391_100648346	3300011270	Vadose Zone Soil	YASVNNIVGASFAPPFNVHGTAAVSPSQPRGFTAAFPKREIQLGVRFDF*
Ga0137393_112581081	3300011271	Vadose Zone Soil	IVGAAFAPPFSIHGTASLSPSQPLGFTAAFPKREVQVGIRFDF*
Ga0137458_10453152	3300011436	Soil	PFDLRGTSARSPSQPLGFTSAFPKRQFQFGVRLGF*
Ga0137389_112094772	3300012096	Vadose Zone Soil	GGAGATTFNVSGTSALSPSQPLGFTSAFPKREIQLGVRFDF*
Ga0153974_11719132	3300012180	Attine Ant Fungus Gardens	GPNFAPPFSVSGTNAVGPTSPLGFDAASAKRELQLGLRLAF*
Ga0137365_104122233	3300012201	Vadose Zone Soil	GAAFAPSFSVHGTAGLSPSQPLGFTAALPKREIQLGLRFDF*
Ga0137399_113166352	3300012203	Vadose Zone Soil	VNNIVGAAFVPPFSVHGTAINSPSQPLGFTAAFPKREIQVGIHFDF*
Ga0137377_113507541	3300012211	Vadose Zone Soil	GATTFNVSGTSALLPSQPLGFTSAFPKREIQLGVRVSF*
Ga0137360_100848183	3300012361	Vadose Zone Soil	VLAPPFDLSGSSASSPSKPLGFTSAFPKREIQLGLRLTF*
Ga0137404_113235242	3300012929	Vadose Zone Soil	PPFNANGTAGLSPSQPLGFTAALPKREIQLGLRFDF*
Ga0137407_102051002	3300012930	Vadose Zone Soil	GVIAPPFRLSGTEAASPSQPLGFTSTFAKREIQLGVRFNF*
Ga0137407_113731081	3300012930	Vadose Zone Soil	VNNIVGAAFAPPFNVRGTANLSPSQPLGFTAALPKREVQLGIRFDF*
Ga0153915_124401462	3300012931	Freshwater Wetlands	GSGHLTANVQGTNLVSPSQPLGFTSAYPMRQIQLGARLTF*
Ga0126375_111392411	3300012948	Tropical Forest Soil	FNVHGSAALSPSQPLGFTSAFPKREIQLALRVTF*
Ga0157372_105827751	3300013307	Corn Rhizosphere	TVNNIVGAAFAPPFAVRGTSAVSPSQPLGYTAALPKRELQLGVRFEF*
Ga0182024_121441121	3300014501	Permafrost	NIVGPAFAPPFNVHGTAALSPSQPLGFTADFPKREIQLGVRFNF*
Ga0137403_110332191	3300015264	Vadose Zone Soil	FAPPFNAHGTAGLSPSQPLGFTAALPKREIQLGLRFDF*
Ga0182036_109049512	3300016270	Soil	AAFAPPFNVHGTANVGPSQPLGFTAAFPNREIQLGVRFTF
Ga0182034_113139601	3300016371	Soil	GAAFGPPFSVHGTANLGPSQPFGFTAAFPNREIQLGVRFTF
Ga0182040_119834541	3300016387	Soil	APPFNVHGTANVGPSQPLGFTAAFPNREIQLGARLTF
Ga0187777_103750611	3300017974	Tropical Peatland	IVGAAFAPPFNVHGTANLGPSQPLGFTAAFPNREIQLGVRLTF
Ga0187782_108806712	3300017975	Tropical Peatland	TTFAVHGSAALSPSTPLGFTSDFPKREIQLGVRLSF
Ga0187816_105394081	3300017995	Freshwater Sediment	TTFDVHGSAALSPSQPLGFTSAFPKREIQLGVRLMF
Ga0066662_119090161	3300018468	Grasslands Soil	GAAFAPPFNVHGTAMLSPSQPLGFTAALPKREIQLGIRFDF
Ga0193751_10580514	3300019888	Soil	APFAPPFSVHGTSINSPSQPLGFTAAFPKREIQVGIHFDF
Ga0210399_114056832	3300020581	Soil	VNNIVDAAFAPPFDVHGTASLSPSQPLGFTAAFPKREIQLGVRLSF
Ga0210401_106038281	3300020583	Soil	NIVGPAFAPPFHVHGTAALSPSQPLGFTADFPKREIQLGVQFYF
Ga0210406_100258361	3300021168	Soil	ANRTNYSSVNNIVGPDFAPPFNVHGTTALSPSQPRGFTADFPKREIQLGVQFNF
Ga0210406_104293631	3300021168	Soil	FSTFNVHGRADLSPSTPLGFTSDFPKRQIQLGARFSF
Ga0210405_108918012	3300021171	Soil	AFAPPFNVHGTAHLSPSQPLGFTAAFPKREIQLGARFSF
Ga0210393_100222005	3300021401	Soil	TTGNASFDVHGSAALSPSQPLGFTSAFPKRQIQLGLRFMF
Ga0210387_102433442	3300021405	Soil	QPGFTTFNVHGSADLSPSTPLGFTSAFPKRQIQLGARFTF
Ga0210384_102060251	3300021432	Soil	TPGFTTFDVHGSAALSPSQPLGFTSAFPKREIQLGLRFVF
Ga0210384_102826291	3300021432	Soil	FAPPFHVHGTAALSPSQPLGFTADFPKREIQLGVQFYF
Ga0126371_136825172	3300021560	Tropical Forest Soil	PPFNVHGTSLVSPSQALGFTAAFPKREIQLGARLSF
Ga0247694_10135901	3300024178	Soil	GATTFHVSGTSAVGPSQPLGFTSALPKREIQFGLRLSF
Ga0224556_10985592	3300024295	Soil	ADFAPPFDVRGTAALSPSQPLGFTAALPKRQVQLGARFNF
Ga0207693_102952104	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	PFNVHGTANLGPSQPLGFTAAFPNREIQLGVRFTF
Ga0209761_12302072	3300026313	Grasslands Soil	APPFDLSGSRASSPSKPLGFTSAFPKREIQLGLRLTF
Ga0257154_10552461	3300026467	Soil	TFNVHGSAALSPSTPLGFTSALPKREIQLGCRFNF
Ga0209577_104436411	3300026552	Soil	PFNVHGTSSLPPSQPLGFTAALPEREVQLGIRFDF
Ga0207860_10357322	3300026921	Tropical Forest Soil	NIVGAAFAPPFNVHGTANVGPSQPLGFTAAFPNREIQLGVRLTF
Ga0208604_10039363	3300027090	Forest Soil	ADFAPPFNVHGTASLSPSQPLGFTAAFPNREIQLGVRLAF
Ga0209626_10232151	3300027684	Forest Soil	YSSVNNIVGPDFAPPFNVHGTAALSPSQPRGFTADFPKREIQLGVQFNF
Ga0209248_100764402	3300027729	Bog Forest Soil	TSFAVHGSSALSPSQPLGFTSAFPKREIQLGLRLTF
Ga0209180_105753322	3300027846	Vadose Zone Soil	NNIVGAAFAPPFSIHGTASLSPSQPLGFTAAFPKREVQVGIRFDF
Ga0209274_100137304	3300027853	Soil	NTTFNVHGSAALSPSQPLGFTSDFPKREIQLGLRVTF
Ga0209590_103681471	3300027882	Vadose Zone Soil	FNIANRTNYSAVNNVVGAAFAPRFNVRGTSALSPSQSLGYTAALPKREIQLGLRVDF
Ga0209380_104542271	3300027889	Soil	TPGFTTFNVHGSAALSPSTPLGFTSALPKREIQLGCRLNF
Ga0209583_107583001	3300027910	Watersheds	IVGAAFAPPFNVHGTASLSPSQPLGFTAAFPKREIQLGARFSF
Ga0137415_102484282	3300028536	Vadose Zone Soil	VNNIVGASFAPPFSVHGTAIKSPSQPLGFTAAFPKREIQVGIHFDF
Ga0311338_104302782	3300030007	Palsa	ATFAPSFNVHGTAALSPSQPLGFTAADAKREIQLGLRLAF
Ga0311370_115345011	3300030503	Palsa	NNIVGATFAPSFNVHGTPSLSPSQPLGFTAADSKREIQLGARLTF
Ga0302180_100288613	3300031028	Palsa	VGATFAPSFNVHGTASLSPSQPLGFTAADAKREIQLGLRLAF
Ga0170820_105278782	3300031446	Forest Soil	GFSTFNVHGRADLSPSTPLGFTSDFPKRQIQLGARFSF
Ga0307474_104573722	3300031718	Hardwood Forest Soil	PDFGPKFNVHGTASLSPSDPLGFTAAAPKREIQLGARFIF
Ga0307469_120192911	3300031720	Hardwood Forest Soil	AFGPQFNVHGTANLGPSQPLGFTAAFPNREIQLGVRFTF
Ga0318502_100930051	3300031747	Soil	AAFAPPFNVHGTANVGPSQPLGFTAAFPNREIQLGARLTF
Ga0307475_102183853	3300031754	Hardwood Forest Soil	GNASFDVHGSAALSPSQPLGFTSAFPKRELQLGLRLTF
Ga0307473_104048361	3300031820	Hardwood Forest Soil	FGPQFNVHGTANLGPSQPLGFTAAFPNREIQLGVRFTF
Ga0310913_111416722	3300031945	Soil	NIVGAAFGPPFSVHGTANLGPSQPFGFTAAFPNREIQLGVRFTF
Ga0307471_1020757972	3300032180	Hardwood Forest Soil	APSFNVHGTASLSPSQPLGFTAAFPKREIQLGARFSF
Ga0307472_1001345331	3300032205	Hardwood Forest Soil	GGAGSTTFNVTGTSAIQPSLPLGFTSVFPKREIQLGLRLSF
Ga0306920_1020328502	3300032261	Soil	FSPNFTTFNVHGSKLLSPSQPLGFTSAFPKREIQLGLRLTF
Ga0306920_1025479382	3300032261	Soil	FAPPFNVHGTANVGPSQPLGFTAAFPNREIQLGARLTF
Ga0306920_1037766172	3300032261	Soil	PFSVHGTANLGPSQPFGFTAAFPNREIQLGVRFTF
Ga0316628_1002375623	3300033513	Soil	TTFHVSGTSAVGPSQPLGFTSALPKREIQFGLRLSF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097891

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences