Metagenome / Metatranscriptome Family F097878

Basic Information
Family ID	F097878
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	81 residues
Representative Sequence	VIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Number of Associated Samples	85
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.73 %
% of genes near scaffold ends (potentially truncated)	93.27 %
% of genes from short scaffolds (< 2000 bps)	97.12 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (91.346 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (26.923 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.731 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122 1AF_2010_repII_A100DRAFT_10337471 2AF_2010_repII_A001DRAFT_100746361 3JGI10216J12902_1127782701 4Ga0066819_10282321 5Ga0066683_102750361 6Ga0066690_104956581 7Ga0066388_1008415753 8Ga0066388_1012987071 9Ga0066388_1032589303 10Ga0066388_1068545631 11Ga0066686_110078841 12Ga0066701_102330233 13Ga0066661_102794064 14Ga0066661_105238752 15Ga0066704_105957941 16Ga0066691_108775392 17Ga0066903_1015642881 18Ga0066903_1032446291 19Ga0066903_1067545841 20Ga0070716_1013975022 21Ga0075362_101493911 22Ga0074060_110394521 23Ga0075430_1002975451 24Ga0075425_1000952546 25Ga0075425_1030369932 26Ga0075424_1020415492 27Ga0075435_1018776671 28Ga0066709_1008133121 29Ga0126374_103195961 30Ga0126374_111449583 31Ga0126374_116514401 32Ga0126384_103518421 33Ga0126382_106948613 34Ga0126370_101068183 35Ga0126372_108750873 36Ga0126372_123526441 37Ga0126381_1037733061 38Ga0126383_123839961 39Ga0137383_107956261 40Ga0137383_111068291 41Ga0137365_106392311 42Ga0137362_101589503 43Ga0137377_110982581 44Ga0137377_114871552 45Ga0137367_110707281 46Ga0137371_102523291 47Ga0126375_107237831 48Ga0126375_112841362 49Ga0126369_105837312 50Ga0134110_102400581 51Ga0132255_1012670521 52Ga0182036_101563093 53Ga0182041_109419331 54Ga0182035_105425423 55Ga0182032_116035611 56Ga0182034_105939853 57Ga0182040_101263923 58Ga0182037_104191192 59Ga0182039_106490252 60Ga0182038_101089121 61Ga0066662_112228391 62Ga0066662_115523722 63Ga0066662_119758651 64Ga0210406_101964084 65Ga0210408_114972951 66Ga0179589_105685282 67Ga0207684_101319653 68Ga0257180_10705231 69Ga0209156_102562451 70Ga0207983_10257921 71Ga0209622_10148462 72Ga0209488_111624901 73Ga0318541_100856251 74Ga0318541_101832664 75Ga0318573_107761241 76Ga0318515_106015591 77Ga0310915_110797711 78Ga0318560_106410192 79Ga0318493_107744662 80Ga0318500_101413131 81Ga0318494_103322453 82Ga0318537_100462485 83Ga0318509_103797482 84Ga0318526_102574593 85Ga0318521_107855451 86Ga0318508_12389671 87Ga0318576_105825181 88Ga0306919_107703711 89Ga0306923_113361831 90Ga0310912_105827052 91Ga0310912_112084321 92Ga0306926_129334992 93Ga0318531_102468032 94Ga0306922_102771892 95Ga0318545_102646812 96Ga0318533_101472481 97Ga0318533_105287682 98Ga0318533_110732381 99Ga0318504_106575141 100Ga0318553_102337142 101Ga0306924_106060601 102Ga0307471_1018996391 103Ga0306920_1014006301 104Ga0318519_110074311
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122 1AF_2010_repII_A100DRAFT_10337471 2AF_2010_repII_A001DRAFT_100746361 3JGI10216J12902_1127782701 4Ga0066690_104956581 5Ga0066388_1032589303 6Ga0066686_110078841 7Ga0066701_102330233 8Ga0075362_101493911 9Ga0074060_110394521 10Ga0075430_1002975451 11Ga0075424_1020415492 12Ga0075435_1018776671 13Ga0137383_107956261 14Ga0126375_107237831 15Ga0126375_112841362 16Ga0066662_112228391 17Ga0179589_105685282 18Ga0257180_10705231 19Ga0318508_12389671 20Ga0318553_102337142
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116.118.120.122 1AF_2010_repII_A100DRAFT_10337471 2AF_2010_repII_A001DRAFT_100746361 3JGI10216J12902_1127782701 4Ga0066690_104956581 5Ga0066388_1032589303 6Ga0066686_110078841 7Ga0066701_102330233 8Ga0075362_101493911 9Ga0074060_110394521 10Ga0075430_1002975451 11Ga0075424_1020415492 12Ga0075435_1018776671 13Ga0137383_107956261 14Ga0126375_107237831 15Ga0126375_112841362 16Ga0066662_112228391 17Ga0179589_105685282 18Ga0257180_10705231 19Ga0318508_12389671 20Ga0318553_102337142
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.68% β-sheet: 29.87% Coil/Unstructured: 45.45%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF08281	Sigma70_r4_2	3.85
PF07813	LTXXQ	2.88
PF03401	TctC	1.92
PF12728	HTH_17	1.92
PF00817	IMS	0.96
PF14020	DUF4236	0.96
PF06689	zf-C4_ClpX	0.96
PF12048	DUF3530	0.96
PF11799	IMS_C	0.96
PF05598	DUF772	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG3678	Periplasmic chaperone Spy, Spy/CpxP family	Posttranslational modification, protein turnover, chaperones [O]	11.54
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.92
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	0.96
COG1737	DNA-binding transcriptional regulator, MurR/RpiR family, contains HTH and SIS domains	Transcription [K]	0.96
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.96
COG3755	Uncharacterized conserved protein YecT, DUF1311 family	Function unknown [S]	0.96
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.35 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.35 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.35 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	89.42 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.96 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	86.54 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.96 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	0.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.77 %
Unclassified	root	N/A	8.65 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	73.08 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	73.08 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.85 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	0.96 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.96 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	73.08 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3.85 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	0.96 %
Sinorhizobium/Ensifer group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group	0.96 %
Unclassified	root	N/A	8.65 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	73.08 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.96 %
Ensifer	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer	0.96 %
Unclassified	root	N/A	8.65 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.88 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	73.08 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1.92 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	0.96 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.96 %
Unclassified	root	N/A	8.65 %
unclassified Ensifer	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer	0.96 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	73.08 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1.92 %
Bradyrhizobium sp. th.b2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. th.b2	0.96 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.96 %
Ensifer sp. IC3342	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Sinorhizobium/Ensifer group → Ensifer → unclassified Ensifer → Ensifer sp. IC3342	0.96 %
Unclassified	root	N/A	8.65 %

Visualization
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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000655\|AF_2010_repII_A100DRAFT_1033747	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10074636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	729	Open in IMG/M
3300000956\|JGI10216J12902_112778270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300005148\|Ga0066819_1028232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	503	Open in IMG/M
3300005172\|Ga0066683_10275036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1046	Open in IMG/M
3300005177\|Ga0066690_10495658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	823	Open in IMG/M
3300005332\|Ga0066388_100841575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1504	Open in IMG/M
3300005332\|Ga0066388_101298707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1254	Open in IMG/M
3300005332\|Ga0066388_103258930	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300005332\|Ga0066388_106854563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M

Showing 1 to 10 of 104 entries

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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.27%
Host-Associated	Host-Associated	6.73%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	6.73%
Terrestrial	Environmental → Terrestrial	93.27%

Habitat	Taxonomy	Distribution
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.81%
Roots	Host-Associated → Plants → Roots	0.96%
Soil	Environmental → Terrestrial → Soil	93.27%

Habitat	Taxonomy	Distribution
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.96%
Loam	Environmental → Terrestrial → Soil → Loam	9.62%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.23%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.46%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	26.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.50%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.62%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005148	Soil and rhizosphere microbial communities from Laval, Canada - mgLMA	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A100DRAFT_10337471	3300000655	Forest Soil	IRTLFNGSTVELDDWEVLCRDRNSYSLAITPEQTASIELVSCGELLATSKTLLERAGSRSKATGCSIKRAERLHRR*
AF_2010_repII_A001DRAFT_100746361	3300000793	Forest Soil	GLNEDQRNETFTYLLRDGNAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSIELVSCRELLATSKMLLERAGSKSKATGCRIERAERLHGR*
JGI10216J12902_1127782701	3300000956	Soil	KGTALGLDDWEALCSDRHSYSITIPPHLNAGIELISCRDLLNTSKMLLHRAGSKSKATGCLIR*
Ga0066819_10282321	3300005148	Soil	LGLNEDQRNETFTYLLRDGNAKCDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATNKMLSHRAGSKSKAKGCRIK*
Ga0066683_102750361	3300005172	Soil	ETFTYLLRDSNAKCDQVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERRR*
Ga0066690_104956581	3300005177	Soil	EIFTELLRDGNVRCDRVIRTLFNGTTSELDVWEALCQDRNSYSLSIPPGPNAEIELVSCRGLLATSKMLLERAGSKTKATGCRIQRAERLHPR*
Ga0066388_1008415753	3300005332	Tropical Forest Soil	RTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIEFVSCRELLATSKMLLEGAGSKSKATGCSIKRAERRR*
Ga0066388_1012987071	3300005332	Tropical Forest Soil	GSTVELDDWEVLCRDRNSYSLTITPEQTPGIELVSCRELLATSKMLLERAGSKSKATGCRIKRAERLHRR*
Ga0066388_1032589303	3300005332	Tropical Forest Soil	QESNEKCDRVIRTLFDGTAQGSDNWEVLCQDRNSYSLRIRPEVNADIELVSCRELVATSKRLLNSAGSKSKAAGCRIK*
Ga0066388_1068545631	3300005332	Tropical Forest Soil	KCDRVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPGIELVSCRELLATSKMLLESAGSKSKATGCRIKRAERLHRR*
Ga0066686_110078841	3300005446	Soil	KCDLVIRTLFNGASVELDVWEALCRDGNSYSVSIPPEPNAAIELLSCRELLATSKMLLEGAGSKSKATGCRIKRAERRR*
Ga0066701_102330233	3300005552	Soil	GEQCDRVIRTLFKGTELGLDEWEALCHDRNSYSFIIPPELTAGIELVSCRELLVTRKMLLHRAGSKSKARGCTIK*
Ga0066661_102794064	3300005554	Soil	LELKLNEDQRDETFTYLLRDSNAKCNRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPQQTAGIELISCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR*
Ga0066661_105238752	3300005554	Soil	FTDLLRDGNVRCDRVIRTLFNGTASELDVWEALCQDRNSYSLSIPPGSNAEIELVSCRGLLATSKMLLERAGSKTKATGCRIQRAERLHPR*
Ga0066704_105957941	3300005557	Soil	FTELLRDGNVRCDRVIRTLFNGTTSELDVWEALCQDRNSYSLSIPPGSNAEIELVSCRGLLATSKMLLEEAGSKTKATGCRIQRAERLHPR*
Ga0066691_108775392	3300005586	Soil	LFIGSTVELDDWEVLCRDRNSYSLTITPEQTPGIEMVSCRELLATSKMLLERAGNKSKATGCRIKRAERLHRR*
Ga0066903_1015642881	3300005764	Tropical Forest Soil	FTYLLQDSNAKCDRVVRTLFNGSTVELDDWEVLCRDRNSYSLTITPQKTAGIELVSCGELLATSKMLLERAASKSKATGCRIKRAERLHRR*
Ga0066903_1032446291	3300005764	Tropical Forest Soil	ELDDWEVLCRDRNSYSLTITPEQIAGIELVSCRELLATSKMLLEGAGSKSKAMGCRIKRAERLHRR*
Ga0066903_1067545841	3300005764	Tropical Forest Soil	VIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELVSCRELLATSKTLLERAGSKSKATGCSIKRAERLHRR*
Ga0070716_1013975022	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	IRTLFDGTAQGLDNWEVLCQDRNSYSLRIPPEVNTDIELVSCRELVATSKRLLNSAGSKSKAAGCRIK*
Ga0075362_101493911	3300006177	Populus Endosphere	MLLALSEDERNGAFTHLLRERNEKCDRVIRTLFGGTALGLDDWEVLCRDRNSYSLTITPELNASIELVSCRELVATSKRLLNSAGSKSKAAGCRIK*
Ga0074060_110394521	3300006604	Soil	RDSNAKCDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK*
Ga0075430_1002975451	3300006846	Populus Rhizosphere	WVIRTLFNGTALGLDNWEVLCRERNSYSLNIPPEVDADVELVSCRELIATSKRLLGRAGRKSKATGCRIK*
Ga0075425_1000952546	3300006854	Populus Rhizosphere	NAKCDRVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK*
Ga0075425_1030369932	3300006854	Populus Rhizosphere	NAKCDRVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSLRAGSKSKAKGCTIK*
Ga0075424_1020415492	3300006904	Populus Rhizosphere	LALSEDDRNAALTYLLQSSSEKCDRVIRTLFNGTALGLDNWEVLCRDRNSYSLSIPPGVNTNVELVSCRELIATSKRLLERTDRKSKATGCRIK*
Ga0075435_1018776671	3300007076	Populus Rhizosphere	WEVLCSDRNSYSLSIPPELTAGIELVSCRELLATSKLLLHRAGSKTKARGCKIK*
Ga0066709_1008133121	3300009137	Grasslands Soil	IRTLFNGTTSELDVWEALCQDRNSYSLTIPPGSNAEIELVSCRGLLATSKMLLERAGSKTKATGCRIQRAERLHPR*
Ga0126374_103195961	3300009792	Tropical Forest Soil	FNGTALGLDNWEVLCRDRNSYSLSIPPGVNADIELVSCRELIATSKRLLGRSDRKGNAKGCRIK*
Ga0126374_111449583	3300009792	Tropical Forest Soil	STVELDDWEVLCRDRNSYSLTITPQKTAGIELVSCGELLATSKMLLERAASKSKATGCRIKRAERLHRR*
Ga0126374_116514401	3300009792	Tropical Forest Soil	RVIRTLFNGASVELDVWEALCRDGNSYSVIIPPEPNAAIELSSCRELLATSKMLLEGAGSKSKAIGCRITAVERPVERRNHRRHRGT*
Ga0126384_103518421	3300010046	Tropical Forest Soil	RTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPGIELVSCRELLTTSKMLLERAGSKSKATGCRIKRAERLHRR*
Ga0126382_106948613	3300010047	Tropical Forest Soil	LGLNEDQRNETFTYLLRDGNAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSIELVSCRELLATSKMLLERAGSKSKATGCRIERAERLHGR*
Ga0126370_101068183	3300010358	Tropical Forest Soil	LRDGNAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSVELVSCRELLATSKMLLERAGSKSKATGCRIERAERLHGR*
Ga0126372_108750873	3300010360	Tropical Forest Soil	VELDDWEVLCRDRNSYSLTITPEQTPSVELVSCRELLATSKMLLERAGSKSKATGCRIERAERLHGR*
Ga0126372_123526441	3300010360	Tropical Forest Soil	LDDWEVLCRDRNSYSLTITPEQTPGIELVSCRELRATSKMLLERAGSKSKATGCRIKRAERLHRR*
Ga0126381_1037733061	3300010376	Tropical Forest Soil	LLALSEDDRNAAFTHVLQVSSEKCDRVIRTLFNGTALGLDNWEVLCRDRNSYSLSIPPGVNTNIELVSCRELIATSKRLLGRAGRKSKATGCRIK*
Ga0126383_123839961	3300010398	Tropical Forest Soil	KCDRVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPGIELVSCRELLATSKMLLESTGSKSKATGCRIKRAERLHRR*
Ga0137383_107956261	3300012199	Vadose Zone Soil	NEKCDRIIRTLFNGTALGLDNWEALCPDQNTYSLSMPPEANADTALVSCRELIATSKRLLERAGRKSKATGCRIK*
Ga0137383_111068291	3300012199	Vadose Zone Soil	TLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPGIEMVSCRELLATSKMLLERAGSKSKATGCRIKRAERLHRR*
Ga0137365_106392311	3300012201	Vadose Zone Soil	MAYRVIRTLFNGTASELDVWEALCQDRNSYSLSIPPGSNAEIELVSCRRLLATSKMLLERAGSKTKATGCRIQRAERLHPR*
Ga0137362_101589503	3300012205	Vadose Zone Soil	LELKLNEDQRDETFTYLLRDSNAKCDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK*
Ga0137377_110982581	3300012211	Vadose Zone Soil	LGLNEDQRNETFTYLLQDSNAKCDRVIRTLFIGSPVELDDWEVLCRDRNSYSLTITPEQTPGIEMVSCRELLATSKMLLERAGSKSKATGCRIKRAERLHRR*
Ga0137377_114871552	3300012211	Vadose Zone Soil	RVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCKIK*
Ga0137367_110707281	3300012353	Vadose Zone Soil	LLALSEVERNAAFTHLLQGSNEKCDRVIRTLFNGTALGLDNWEVLCRDRNSYSLSIPPEVNADIELVSCRELIATSKRLLERAGRKSKATGCRIK*
Ga0137371_102523291	3300012356	Vadose Zone Soil	RTLFNGTALGLDNWEVLCRDRNSYSLSIPPEVNADIELVSCRELIATSKRLLERAGRKSKATGCRIK*
Ga0126375_107237831	3300012948	Tropical Forest Soil	NGATSELDVWEALCRDGNSYSLTIPPESNAGIELVSCRELLATSKMLLERTGSKSKPTGCRINE*
Ga0126375_112841362	3300012948	Tropical Forest Soil	QGSSEKCDRVIRTLFNGTALGVDNWEVLCRDRNSYSLSIPPAVNTNIELVSCRELIATSKRLLGRSDRKGNAKGCRIK*
Ga0126369_105837312	3300012971	Tropical Forest Soil	HVIRTVFNGATSELDVWEALCRDGNSYSLTIPPEPNAGIELLSCRELLATSKMLLERAGSKSKLTGCRINDTC*
Ga0134110_102400581	3300012975	Grasslands Soil	LGLSEGERKEIFTELLRDGNVRCDRVIRTLFNGTTSELDVWEALCQDRNSYSLSIPPGSNAEIELVSCRGLLATSKMLLERAGSKTKATGCRIQ
Ga0132255_1012670521	3300015374	Arabidopsis Rhizosphere	DRNAALTYLLQSSSEKCDRVIRTLFNGTALGLDNWEVLCRDRNSYSLSIPPGVNTNVELVSCRELIATSKRLLERADRKSKVTGCRIK*
Ga0182036_101563093	3300016270	Soil	EALLGLNEDQRNETFTYLLRDSNAKCDQVIRTLFNGSTVELDDWEVLCRDRNSYSLAITPEQTASIELVSCGELLATSKTLLERAGSRSKATGCSIKRAERLHRR
Ga0182041_109419331	3300016294	Soil	NEDQRNETFTYILRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0182035_105425423	3300016341	Soil	NAKCDQVIRTLFNGSTVELDDWEVLCRDRNSYSLAITPEQTASIELVSCGELLATSKTLLERAGSRSKATGCSIKRAERLHRR
Ga0182032_116035611	3300016357	Soil	VIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Ga0182034_105939853	3300016371	Soil	LGLDEDQRNETFTYLLRDSNAKCDQVIRTLFNGSTVELDDWEVLCRDRNSYSLAITPEQTASIELVSCGELLATSKTLLERAGSRSKATGCSIKRAERLHRR
Ga0182040_101263923	3300016387	Soil	GLNEDQRNETFTYILRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0182037_104191192	3300016404	Soil	LRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0182039_106490252	3300016422	Soil	FNGATSELDVWEALCRDGNSYSLTIPPESNAGIELVSCRELLATSKMLLERTGSKSKPTGCRINE
Ga0182038_101089121	3300016445	Soil	RDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0066662_112228391	3300018468	Grasslands Soil	EDERNAALTRLLHKSNEECDRVIRTLFNGTTLGLDDWEVLCSDGNSYSLSIPPELTAGVELVSCRELLATSKLLLHRAGSKTKAKGCKIK
Ga0066662_115523722	3300018468	Grasslands Soil	NAKCDRVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQIPSIELVSCRELLATSKMLLERAGSKSKAMGCRIERAERLHRR
Ga0066662_119758651	3300018468	Grasslands Soil	CDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELISCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Ga0210406_101964084	3300021168	Soil	IRTLFNGSTVELDDWEVLCRDRNSYSLAITPEQSAGIELISCRELLATSKMLLEGAGSKSKAKGCRIKRAERLLRR
Ga0210408_114972951	3300021178	Soil	IRTFFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLLHRAGSKSKAKGCRIK
Ga0179589_105685282	3300024288	Vadose Zone Soil	AGNCAKLGQRGTIGAQDQRNETFTYLLQDSNAKCDRVIRTLFNGSTVELDDWKVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK
Ga0207684_101319653	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	TLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK
Ga0257180_10705231	3300026354	Soil	TALGLDNWEVLCRDRNSYSLSIPPGVNTNIELVSCRELIATSKRLLERADRKSKATGCRI
Ga0209156_102562451	3300026547	Soil	RTLFNGTASELDVWEALCQDRNSYSLSIPPGSNAEIELVSCRGLLATSKMLLERAGSKTKATGCRIQRAERLHPR
Ga0207983_10257921	3300027310	Soil	LFGLSEDQRNETFTRLLQDNSAKCDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTVHIELVSCRELLATSKMLSHRAGSKSKAKGCRIK
Ga0209622_10148462	3300027502	Forest Soil	MFTYLLRDSDAKCDRVIRTLFNGSTVELDAWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLLHRAGSKSKAKGCRIK
Ga0209488_111624901	3300027903	Vadose Zone Soil	CDRVIRTLFNGTTLGLDDWEVLCSDRNSYSISIPPELTAGIELVSCRELLATSKLLLHRAGSKTKAKGCKIK
Ga0318541_100856251	3300031545	Soil	TLFNGSTVELDDWEVLCRDRNSYSLTITPEQAAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Ga0318541_101832664	3300031545	Soil	KCDRVIRTLFNGTALGVDNWEVLCRDRNSYSLSIPPGVNTNIELVSCRELIATSKRLLERADRKSKATGCRIK
Ga0318573_107761241	3300031564	Soil	RTLLGLDEDQRNETFTYLLRDSNAKCDQVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQSAGIELVSCRELLATSKTLLERAGSKSKATGCSIKPAERLHRR
Ga0318515_106015591	3300031572	Soil	FIGSTVELDHWEMLCRDRNSYSLTITPEQTPGIELVSCQELLATSKMLLERAGSKSKATGCRIKRAERLHRR
Ga0310915_110797711	3300031573	Soil	TYLLQSSSEKCDRVIRTLFNGTALGLDNWEVLCRDRNSYSLNIPPGVNADIELVSCRELIATSKRLLGRSDRKGTATGCRIK
Ga0318560_106410192	3300031682	Soil	STVELDDWEVLCRDRNSYSLTITPEQTAGIEFVSCRELLATSKMLLEGAGSKSKATGCSIKRAERRR
Ga0318493_107744662	3300031723	Soil	FNGATSELDVWEALCRDGNSYSLTVPPESNAGIGLLSCRELLATSKMFLERTGSKSKPTGCRINE
Ga0318500_101413131	3300031724	Soil	FNGSTVELDEWEVLCRDKNSYSLTITPEQTAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Ga0318494_103322453	3300031751	Soil	IRTLFNGATSELDVWEALCRDGNSYSLTVPPESNAGIGLLSCRELLATSKMFLERTGSKSKPTGCRINE
Ga0318537_100462485	3300031763	Soil	LAHVIRTLLVGATSELDVWEALCRDGNSYSLTVPPESNAGIGLLSCRELLATSKMFLERTGSKSKPTGCRINE
Ga0318509_103797482	3300031768	Soil	EAFTYLLQDSNAKCDRVIRTLFIGSTVELDHWEMLCRDRNSYSLTITPEQTPGIELVSCQELLATSKMLLERAGSKSKATGCRIKRAERLHRR
Ga0318526_102574593	3300031769	Soil	CLAHVIRTLFNGATSELDVWEALCRDGNSYSLTVPPESNAGIGLLSCRELLATSKMFLERTGSKSKPTGCRINE
Ga0318521_107855451	3300031770	Soil	LAHVIRTVFNGATSELDVWEALCRDGNSYSLTIPPESNAGIELVSCRELLATSKMLLERTGSKSKPTGCRINE
Ga0318508_12389671	3300031780	Soil	DQRNETFTRLLRDNSAQCDRVIRTLFNGASVELDVWEALCRDGNSYSVSIPPEPNAAIELSSCRELLATSKMLLEGARSKS
Ga0318576_105825181	3300031796	Soil	EALLGLNEDQRNETFTYILRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0306919_107703711	3300031879	Soil	FNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIELVSCRELLATSKMLLEGAGSKSKATGCRIKRAERLHRR
Ga0306923_113361831	3300031910	Soil	KCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0310912_105827052	3300031941	Soil	TFTYILRDGNAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSIELVSCRELLATSKILLERAGSKSKATGCRIERAERLHGR
Ga0310912_112084321	3300031941	Soil	HVIRTVFNGATSELDVWEALCRDGNSYSLTIPPESNAGIELVRCRELLATSKMLLERTGSKSKPTGCRINE
Ga0306926_129334992	3300031954	Soil	SDAKCDRVIRTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTARIEWVSCRELLATSKMLLHRAGSKSKAKGCRIK
Ga0318531_102468032	3300031981	Soil	LGLNEDQRNEAFTYLLQDSNAKCDRVIRTLFIGSTVELDHWEMLCRDRNSYSLTITPEQTPGIELVSCQELLATSKMLLERAGSKSKATGCRIKRAERLHRR
Ga0306922_102771892	3300032001	Soil	DRVIRTLFNGTALGLDNWEVLCRDRNSYSLSIPPGVNADIELVNCRELIATSKRLLGRSDRKGNATGCRIK
Ga0318545_102646812	3300032042	Soil	LFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIEFVSCRELLATSKMLLEGAGSKSKATGCSIKRAERRR
Ga0318533_101472481	3300032059	Soil	RTLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAGIEFVSCRELLATSKMLLEGAGSKSKATGCSIKRAERRR
Ga0318533_105287682	3300032059	Soil	TYILRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0318533_110732381	3300032059	Soil	TYLLRDGNAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSIELVSCRELLATSKMLLERAGSKSKATGCRIQRAERLHRR
Ga0318504_106575141	3300032063	Soil	NAKCDWVIRTLFIGSTVELDDWEVLCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0318553_102337142	3300032068	Soil	EVLCRDRNSYSLTITPEQTAGIEFVSCRELLATSKMLLEGAGSKSKATGCSIKRAERRR
Ga0306924_106060601	3300032076	Soil	RNVTYILRDGNAKCDWVIRTLFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR
Ga0307471_1018996391	3300032180	Hardwood Forest Soil	TLFNGSTVELDDWEVLCRDRNSYSLTITPEQTAHIELVSCRELLATSKMLSHRAGSKSKAKGCTIK
Ga0306920_1014006301	3300032261	Soil	SSKKCDRVIRTLFNGTALGVDNWEVLCRDRNSYSLSIPPGVNADIELVNCRELIATSKRLLGRSDRKGNATGCRIK
Ga0318519_110074311	3300033290	Soil	LFIGSTVELDDWEALCRDRNSYSLTITPEQTPSIELVSCRELLATSKRLLERAGSKSKATGCRIERAERLHGR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097878

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences