NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F097848

Metagenome Family F097848

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F097848
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 47 residues
Representative Sequence MTPCPLGLAGQCYCANQVSSFAAAEPAKTAVLLLAHGSPENPDQIP
Number of Associated Samples 97
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 95.19 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 91.35 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (84.615 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland
(14.423 % of family members)
Environment Ontology (ENVO) Unclassified
(44.231 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.308 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 4.05%    β-sheet: 10.81%    Coil/Unstructured: 85.14%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF01208URO-D 87.50
PF07992Pyr_redox_2 0.96
PF01155HypA 0.96
PF00762Ferrochelatase 0.96
PF14691Fer4_20 0.96
PF12158DUF3592 0.96
PF07228SpoIIE 0.96
PF16901DAO_C 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0407Uroporphyrinogen-III decarboxylase HemECoenzyme transport and metabolism [H] 87.50
COG0276Protoheme ferro-lyase (ferrochelatase)Coenzyme transport and metabolism [H] 0.96
COG0375Hydrogenase maturation factor HypA/HybF, metallochaperone involved in Ni insertionPosttranslational modification, protein turnover, chaperones [O] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A84.62 %
All OrganismsrootAll Organisms15.38 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q01C8V70Not Available506Open in IMG/M
3300001356|JGI12269J14319_10191475All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis815Open in IMG/M
3300001356|JGI12269J14319_10249112All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis663Open in IMG/M
3300001661|JGI12053J15887_10633728Not Available508Open in IMG/M
3300004092|Ga0062389_101609914Not Available832Open in IMG/M
3300005174|Ga0066680_10242783All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1143Open in IMG/M
3300005995|Ga0066790_10329001Not Available652Open in IMG/M
3300006052|Ga0075029_100412231Not Available880Open in IMG/M
3300006174|Ga0075014_100380695Not Available764Open in IMG/M
3300006354|Ga0075021_10975286All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae552Open in IMG/M
3300006800|Ga0066660_11298144Not Available569Open in IMG/M
3300009524|Ga0116225_1198304Not Available908Open in IMG/M
3300009549|Ga0116137_1084651Not Available954Open in IMG/M
3300009645|Ga0116106_1070396Not Available1147Open in IMG/M
3300009683|Ga0116224_10402225Not Available651Open in IMG/M
3300009709|Ga0116227_11078917Not Available604Open in IMG/M
3300009760|Ga0116131_1155175Not Available656Open in IMG/M
3300009762|Ga0116130_1216836Not Available607Open in IMG/M
3300009764|Ga0116134_1125919Not Available914Open in IMG/M
3300009764|Ga0116134_1276510Not Available578Open in IMG/M
3300009839|Ga0116223_10230027Not Available1124Open in IMG/M
3300010048|Ga0126373_11020062Not Available893Open in IMG/M
3300010337|Ga0134062_10233499Not Available850Open in IMG/M
3300010343|Ga0074044_10480850Not Available812Open in IMG/M
3300010366|Ga0126379_13533842Not Available523Open in IMG/M
3300012201|Ga0137365_11079018Not Available579Open in IMG/M
3300012203|Ga0137399_10683436Not Available864Open in IMG/M
3300012203|Ga0137399_11236690Not Available629Open in IMG/M
3300012922|Ga0137394_10351544Not Available1258Open in IMG/M
3300012923|Ga0137359_11072254Not Available690Open in IMG/M
3300012924|Ga0137413_10744496Not Available748Open in IMG/M
3300012929|Ga0137404_10276981Not Available1448Open in IMG/M
3300012929|Ga0137404_11349224Not Available658Open in IMG/M
3300012944|Ga0137410_11812109Not Available539Open in IMG/M
3300014158|Ga0181521_10617336Not Available506Open in IMG/M
3300014159|Ga0181530_10379385Not Available723Open in IMG/M
3300014162|Ga0181538_10060771All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis2320Open in IMG/M
3300017929|Ga0187849_1066205Not Available1621Open in IMG/M
3300017931|Ga0187877_1172660Not Available858Open in IMG/M
3300017933|Ga0187801_10118036Not Available1017Open in IMG/M
3300017937|Ga0187809_10270932Not Available619Open in IMG/M
3300017940|Ga0187853_10030834All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2869Open in IMG/M
3300017941|Ga0187850_10274385Not Available753Open in IMG/M
3300017973|Ga0187780_11053795All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300017974|Ga0187777_11139185Not Available569Open in IMG/M
3300017988|Ga0181520_10217761Not Available1486Open in IMG/M
3300017995|Ga0187816_10084455Not Available1354Open in IMG/M
3300017998|Ga0187870_1200166Not Available703Open in IMG/M
3300018001|Ga0187815_10522880Not Available509Open in IMG/M
3300018008|Ga0187888_1116042Not Available1126Open in IMG/M
3300018022|Ga0187864_10379128Not Available613Open in IMG/M
3300018024|Ga0187881_10162659Not Available967Open in IMG/M
3300018026|Ga0187857_10119502Not Available1269Open in IMG/M
3300018033|Ga0187867_10773087Not Available522Open in IMG/M
3300018040|Ga0187862_10418864Not Available819Open in IMG/M
3300018042|Ga0187871_10721970Not Available555Open in IMG/M
3300018044|Ga0187890_10256897Not Available983Open in IMG/M
3300018057|Ga0187858_10318513Not Available982Open in IMG/M
3300018057|Ga0187858_10898654Not Available521Open in IMG/M
3300018062|Ga0187784_11328401Not Available570Open in IMG/M
3300018086|Ga0187769_11429630Not Available523Open in IMG/M
3300019787|Ga0182031_1316430All Organisms → cellular organisms → Bacteria → Acidobacteria2605Open in IMG/M
3300020582|Ga0210395_10113616All Organisms → cellular organisms → Bacteria2007Open in IMG/M
3300021088|Ga0210404_10255871Not Available954Open in IMG/M
3300021171|Ga0210405_10289902Not Available1294Open in IMG/M
3300021407|Ga0210383_10939934Not Available735Open in IMG/M
3300022873|Ga0224550_1024506Not Available854Open in IMG/M
3300025446|Ga0208038_1000538All Organisms → cellular organisms → Bacteria28906Open in IMG/M
3300025480|Ga0208688_1053771Not Available861Open in IMG/M
3300025480|Ga0208688_1061821Not Available780Open in IMG/M
3300025507|Ga0208188_1058089Not Available951Open in IMG/M
3300025507|Ga0208188_1120846Not Available574Open in IMG/M
3300025527|Ga0208714_1106049Not Available550Open in IMG/M
3300025929|Ga0207664_10556173All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300025939|Ga0207665_11229632All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_69_9598Open in IMG/M
3300026294|Ga0209839_10208013Not Available626Open in IMG/M
3300026356|Ga0257150_1016499Not Available1023Open in IMG/M
3300027645|Ga0209117_1082076Not Available901Open in IMG/M
3300027692|Ga0209530_1127126Not Available719Open in IMG/M
3300027729|Ga0209248_10046143Not Available1342Open in IMG/M
3300027783|Ga0209448_10096469Not Available991Open in IMG/M
3300027846|Ga0209180_10534916Not Available654Open in IMG/M
3300027854|Ga0209517_10337992Not Available866Open in IMG/M
3300027894|Ga0209068_10239027Not Available1007Open in IMG/M
3300027898|Ga0209067_10494941Not Available693Open in IMG/M
3300027903|Ga0209488_10822053Not Available657Open in IMG/M
3300028651|Ga0302171_10006351All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3152Open in IMG/M
3300028665|Ga0302160_10124094Not Available585Open in IMG/M
3300028762|Ga0302202_10135596Not Available1345Open in IMG/M
3300028798|Ga0302222_10274499Not Available657Open in IMG/M
3300028855|Ga0302257_1094157Not Available665Open in IMG/M
3300028865|Ga0302291_10246241Not Available611Open in IMG/M
3300029883|Ga0311327_10922233Not Available503Open in IMG/M
3300030007|Ga0311338_10126429All Organisms → cellular organisms → Bacteria → Acidobacteria3104Open in IMG/M
3300030043|Ga0302306_10123796Not Available1000Open in IMG/M
3300030049|Ga0302191_10235344Not Available681Open in IMG/M
3300030399|Ga0311353_10164777All Organisms → cellular organisms → Bacteria → Acidobacteria2106Open in IMG/M
3300030520|Ga0311372_12200761Not Available635Open in IMG/M
3300030524|Ga0311357_10515227Not Available1112Open in IMG/M
3300030618|Ga0311354_10351035Not Available1506Open in IMG/M
3300030706|Ga0310039_10378921Not Available524Open in IMG/M
3300031344|Ga0265316_10040139All Organisms → cellular organisms → Bacteria → Acidobacteria3754Open in IMG/M
3300033818|Ga0334804_076119Not Available908Open in IMG/M
3300034124|Ga0370483_0045672Not Available1369Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland14.42%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland10.58%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil10.58%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil6.73%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa6.73%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds4.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.81%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog3.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment3.85%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.85%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen3.85%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.88%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.88%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog2.88%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.92%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.92%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil1.92%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.96%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.96%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.96%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.96%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.96%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog0.96%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.96%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.96%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.96%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
3300001356Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007EnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005995Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006174Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009549Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_100EnvironmentalOpen in IMG/M
3300009645Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009760Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_100EnvironmentalOpen in IMG/M
3300009762Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014158Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaGEnvironmentalOpen in IMG/M
3300014159Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaGEnvironmentalOpen in IMG/M
3300014162Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaGEnvironmentalOpen in IMG/M
3300017929Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100EnvironmentalOpen in IMG/M
3300017931Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017940Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100EnvironmentalOpen in IMG/M
3300017941Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150EnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300017998Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150EnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018022Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40EnvironmentalOpen in IMG/M
3300018024Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100EnvironmentalOpen in IMG/M
3300018026Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100EnvironmentalOpen in IMG/M
3300018033Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018057Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150EnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300019787Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300022873Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14EnvironmentalOpen in IMG/M
3300025446Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_100 (SPAdes)EnvironmentalOpen in IMG/M
3300025480Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150 (SPAdes)EnvironmentalOpen in IMG/M
3300025507Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025527Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300026356Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-AEnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027692Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027729Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027854Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027898Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028651Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_2EnvironmentalOpen in IMG/M
3300028665Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3EnvironmentalOpen in IMG/M
3300028762Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3EnvironmentalOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300028855Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_4EnvironmentalOpen in IMG/M
3300028865Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4EnvironmentalOpen in IMG/M
3300029883I_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030043Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1EnvironmentalOpen in IMG/M
3300030049Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1EnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030524II_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030618II_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030706Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)EnvironmentalOpen in IMG/M
3300031344Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaGHost-AssociatedOpen in IMG/M
3300033818Peat soil microbial communities from Stordalen Mire, Sweden - 713 S-3-MEnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_020821502170459005Grass SoilMSACPLGLGGRCYCADRVSSFTAAPSRTAVLLLAHGTPESPEHVPEFLSYVTG
JGI12269J14319_1019147513300001356Peatlands SoilMTPCPLGPTSQCYCANHVSSFSAAAKSSGTSAKTTVLLLAHGSPENPDQIPEFLSYVTGG
JGI12269J14319_1024911223300001356Peatlands SoilMTPCPLGLAGRCYCANQVSSFAVAEPAKTAVLLLAHGSPENPDQIPEFLRYVTG
JGI12053J15887_1063372813300001661Forest SoilMTACPLGLAGQCYCANRVSSFVSSEGSAKTAVLLLAHGSPENPSQVSE
Ga0062389_10160991413300004092Bog Forest SoilMKPCPLGQSGQCYCANQVSSFAASQPAKTAVLLLAHGSPESPDQI
Ga0066680_1024278323300005174SoilMTACPLGLAAQCYCANQVSSFTSSEMPAKTAVFLLAHGSPENPAQVPEFLG
Ga0066790_1032900113300005995SoilMTACPLGLAGQCYCANRVNSFAAAERAKTAVLLLAHGSPENPDQIPE
Ga0075029_10041223113300006052WatershedsMVPCPLGQAAQCYCANRVSSFACAKSPAKTAVLLLAHGSPENPDQIPE
Ga0075014_10038069513300006174WatershedsMTMCPLGRAEACYCANQVSAFVRAPAQSLSARIAVLLLAHGSPENPD
Ga0075021_1097528623300006354WatershedsMTPCPLGPARHCYCASRVTSFGGLPATAKQAVLLLAHGSPENSDQVPEFLNY
Ga0066660_1129814413300006800SoilMTACPLGLAGQCYCANQVSSFAASEAPAKTAVLLLAHGSPENPGQ
Ga0116225_119830433300009524Peatlands SoilMSPCPLGLASQCYCANRVSAFAASERPAKTTVLLLAHGSPENPDQIP
Ga0116137_108465123300009549PeatlandMTICPLGLVGQCYCANRVSSFAASEQSSKLSANTEVLLLAH
Ga0116106_107039623300009645PeatlandMTPCPLGPASQCYCANQVSSFPASGPPANTAVLLLAHGSPENPDQIPEFL
Ga0116224_1040222513300009683Peatlands SoilMPHRVKDGVEKMTACPLGLAGQCYCANRVSAFASSAAQPAKTAVLLLAHGSPENPSQVPEFLS
Ga0116227_1107891723300009709Host-AssociatedMNRMTPCPLNLAGECYCANRVSSFGAGKLPAKTAVLLL
Ga0116131_115517523300009760PeatlandMTPCPLGLAGQCYCANRVRSFASSEPAKTAVLLLAHGSPENPGQ
Ga0116130_121683623300009762PeatlandMEPKMTACPLGLSRQCYCANHVSSFAAEANSSASPAKTAVLLLAHG
Ga0116134_112591923300009764PeatlandMTACPLGLASQCYCANQVSSFAASEQSTQLSAKTAVLLLAHGSPENTSQVPEFLSSV
Ga0116134_127651013300009764PeatlandMTPCPLGLASQCYCANRVSSFATPEQSSEQFAKTA
Ga0116223_1023002733300009839Peatlands SoilMTPCPLGLAGQCYCANRVSSFASAELPARAAVLLLAHGSPE
Ga0126373_1102006223300010048Tropical Forest SoilMTTCPLNLDDRCYCANHINTFEAAPSKTAVLLLAHGTPESPAQIPE
Ga0134062_1023349923300010337Grasslands SoilMSACPLGFGNRCYCANQDSSFAAVSSKTAVLLLAHGTP
Ga0074044_1048085013300010343Bog Forest SoilMTPCPLGQSGQCYCANRINSFAASAPAKTAVLLLAHGSPENPSQVPEFLGYVTGG
Ga0126379_1353384223300010366Tropical Forest SoilMSGCPLDLGGHCYCANQVSWFAGEESKTAVLLLAHGSPEN
Ga0137365_1107901823300012201Vadose Zone SoilMSACPLELGGRCYCASHVISFAAAPSQTAVLLLAHGTPENPDQIP
Ga0137399_1068343623300012203Vadose Zone SoilMTACPLGLDAQCYCANQVSSFTSSEAPARTAVLLLAHGSPENPGQVPEFLGYV
Ga0137399_1123669013300012203Vadose Zone SoilMTACPLAFAGQCYCANQVSWFAASEAPAKTAALLLAHGSP
Ga0137394_1035154423300012922Vadose Zone SoilMSTEGCPLRLGAECYCANRVSAFATAHSSAAVLLLAHGTPENRDQIPEY
Ga0137359_1107225413300012923Vadose Zone SoilMSACPLGLGGRCYCANHVVSFAGAPSKTAVLLLAHGTPEDPEQVPEYLPY
Ga0137413_1074449623300012924Vadose Zone SoilMTPCPLGLAGQCYCANQKNSFASKQPAKTAVLLLAHGSPENPGQISEFLSYVTGG
Ga0137404_1027698113300012929Vadose Zone SoilMSACPLGLGGRCYCANHVVSFAGAPSKTAVLLLAHGTPENPEQ
Ga0137404_1134922423300012929Vadose Zone SoilMSACPLGFGNRCYCANQDSSFAAASSKTAVLLLAHGTPD
Ga0137410_1181210913300012944Vadose Zone SoilMSACPLGFGNRCYCANQDSSFAAASSKTAVLLLAHGTPDT
Ga0181521_1061733623300014158BogMTICPLGLVGQCYCANRVSSFAASEQSSKLSAKTAVLLLAHGSPE
Ga0181530_1037938523300014159BogMTPCPLGPASQCYCANRASSFAAAEPAKAAVLLLAHGSPENPDQIPEFL
Ga0181538_1006077143300014162BogMTPCPLGPASQCYCANQVSSFPASGPPANTAVLLLAHGSPENPDQIPEFLRYVT
Ga0187849_106620533300017929PeatlandMTACPLGLAGQCYCANQVSSFAAEANSSASPAKAAVLLLAHGSPENPDQVPEFLSYVTG
Ga0187877_117266023300017931PeatlandMTPCPLGLAGQCYCANRVSSFAPSALPAKTAALLLAHGSPENPGQVSEFLSYVTG
Ga0187801_1011803623300017933Freshwater SedimentMTPCPLGLAGRCYCANRVSSFAVTPAKTAVLLLAHG
Ga0187809_1027093213300017937Freshwater SedimentMTACPLGLGSACYCRNHVSSFLPTEPSARDAKTAVLLLAHGSPENPDQVPEFLRYVTG
Ga0187853_1003083433300017940PeatlandMTACPLGLAGQCYCANQVSAFAASELPAKTAVLLLAHGSPENP
Ga0187850_1027438523300017941PeatlandMSECPLGLGSACYCANQVSSFWVAPASLAGPKTAVLLLAHGSPENPDQ
Ga0187780_1105379523300017973Tropical PeatlandMTCPLGLGGQCYCANKISFFAAAPTKTAVLLLAHGSPENPDQIPEFLRHVTG
Ga0187777_1113918513300017974Tropical PeatlandMTPCPLGLGGACYCANHLSSFPVAAAPSAGAKTAVLLLAHGSPENPDQIPEFL
Ga0181520_1021776113300017988BogMTPCPLGLVGQCYCSSHASSFACSQPKTKTAVLLLAHGSPENPDQTPEFLRY
Ga0187816_1008445523300017995Freshwater SedimentMTDCPLGQPCQCYCAHGVTSFAAAGPSQKTAVLLLAHGSPENPSQVPEFLSYVT
Ga0187870_120016613300017998PeatlandMTACPLGFASQCYCANRVSSFAASPAKAAVLLLAHGSPENPDQVPE
Ga0187815_1052288023300018001Freshwater SedimentMTPCPLGLGGQCYCANQVSSFAVSPSKTAVLLLAHGSPENPGQVPEFLGYVT
Ga0187888_111604233300018008PeatlandMTACPLSLASQCYCANRVSAFAASARPAKTDVLLLAHGSPEN
Ga0187864_1037912813300018022PeatlandMSPCPLGLASQCYCANRVSAFAASEHSAKTAVLLLAHGSPENPDQVPEFLSYVTG
Ga0187881_1016265923300018024PeatlandMTPCPLGQAGQCYCANRVSSFAASERSAKTAVLLLAHGSPENPDQIPEFLKYVT
Ga0187857_1011950223300018026PeatlandMTPCPLGQAGQCYCANRVSSFAASERSAKTAVLLLAHGSPENPDQIPEFLK
Ga0187867_1077308713300018033PeatlandMTPCPLGLAGQCYCANQASSFCAAPAKTAVLLLAHGSPENPDQIPEF
Ga0187862_1041886423300018040PeatlandMTPCPLGLAGQCYCANQASSFCAAPAKTAVLLLAHGSPEKPDQIP
Ga0187871_1072197023300018042PeatlandMTPCPLGLAGQCYCANRVNSFAAAPAKTAVLLLAHGSPETPD
Ga0187890_1025689723300018044PeatlandMTPCPLGRDAKCYCANQVSSFASAKPAKIAVLLLAHG
Ga0187858_1031851323300018057PeatlandMTPCPLGLAGQCYCANRVSSFSGSPAKTAVLLLAHGSPENPDQTPE
Ga0187858_1089865413300018057PeatlandMTPCPLGLAGRCYCANQVSAFAASELPAKTAVLLLA
Ga0187784_1132840123300018062Tropical PeatlandMTPCPLGLAGECYCANQINSFASAPAKTAVLLLAHGSPENPDQI
Ga0187769_1142963023300018086Tropical PeatlandMTPCPLGLTSECYCANRVSSFAAPDQSSERAARTAVLLLAHGSPETPGQIPEFLSYV
Ga0182031_131643013300019787BogPCPLGLAGQCYCANRVNSFAAAPAKTAVLLLAHGSPETPDQTPEFLRYVTEAAHSHRK
Ga0210395_1011361613300020582SoilMTACPLGLASQCYCANKISSFADRNRAKTAVLLLAHGSPETPDHIPEFLKYVTG
Ga0210404_1025587113300021088SoilMTACPLGLAGQCYCANQVSSFAASEEPARTAVLLLAHGSPENPSQVP
Ga0210405_1028990223300021171SoilMTACPLGLAGQCYCANQVSSFAASEEPARTAVLLLAHGSPENPSQVPEFLGY
Ga0210383_1093993413300021407SoilMTACPLGLAGECYCAKQISSFGVSNPPAKTAVLLVAHGSPENPDQIPEFLGYVT
Ga0224550_102450613300022873SoilMTNCPLGLAGQCYCANHVSSFPAQPASATSAKTAVLLLAHGCPENPGQIPEFL
Ga0208038_100053813300025446PeatlandMTICPLGLVGQCYCANRVSSFAASEQSSKLSAKTAVLLLAH
Ga0208688_105377113300025480PeatlandMTPCPLGLAGQCYCANRVSSFAPSALPAKTAVLLLAHGSPENPGQVSEFLSYVTGGRPL
Ga0208688_106182123300025480PeatlandMTPCPLGLAGQCYCANQVSSFAAAEPAKTAVLLLAHGSPENPDQIP
Ga0208188_105808923300025507PeatlandMTACPLGLAGQCYCANQVSAFAASELPAKTAVLLLAHGSPENPS
Ga0208188_112084613300025507PeatlandMTPCPLGQAGQCYCANRVSSFAASERSAKTAVLLLAHGSPENPDQIPEFLKY
Ga0208714_110604923300025527Arctic Peat SoilMTPCPLGQAGQCYCAKQVSSFAVPSAKTAVLLLAHGSPENPDQVPEFLSYVTG
Ga0207664_1055617323300025929Agricultural SoilMTPCPLGLAGQCYCANQKNSFASKQPAKTAVLLLAHGSPENPGQIPEFLSYVT
Ga0207665_1122963213300025939Corn, Switchgrass And Miscanthus RhizosphereMSACPLGLGGRCYCANHLSSFAPAPSKTAVLLLAH
Ga0209839_1020801313300026294SoilMTACPLGLAGQCYCANRVNSFAAAERAKTAVLLLAHGSPENPDQIPEF
Ga0257150_101649923300026356SoilMTACPLGLAAQCYCANQVSSFAASEAPAKTAVLLL
Ga0209117_108207613300027645Forest SoilMTACPLALSGRCYCANHVSSFAASEQSSDLSAKTAVLMLAHGSPENPSQVPEFLNNV
Ga0209530_112712613300027692Forest SoilMTVTPCPLGLAGQCYCANRVNSFTAPKLPAKDAVLLLAHGS
Ga0209248_1004614313300027729Bog Forest SoilMMACPLALANRCYCANQVSSFSTLEQASGTSAKTAVLLLAHGSPENTDQIPE
Ga0209448_1009646913300027783Bog Forest SoilMTPCPLRLDSQCYCGNRVSSFAAAEPRKTAVLLLAHGSPENPDQI
Ga0209180_1053491623300027846Vadose Zone SoilMSTCPLGLGGRCYCANHVSSFVAAPSKTAVLLLAHGSPEN
Ga0209517_1033799233300027854Peatlands SoilMSPCPLGLASQCYCANRVSAFAASERPAKTTVLLLAHGSPENPDQIPEFLSYVTG
Ga0209068_1023902713300027894WatershedsMTNCPLGLAEKCYCANSVSAFSASGPAKTAILLLAHGSPENPDQVPEFLRYVTG
Ga0209067_1049494113300027898WatershedsMNPCPLGLGGQCYCANRVSSFAASPSKTAVLLLAHGSPENPGQVPEFLGYV
Ga0209488_1082205313300027903Vadose Zone SoilMTACPLGLAGQCYCANRVSSFAASEEPARTAVLLL
Ga0302171_1000635113300028651FenMRNCPLGPIAQCYCANQVSSFSIAASKTAVLLLAHGTPESPSQIPEYLG
Ga0302160_1012409423300028665FenMTSCPLGLAGTCYCANSVNSFVRSSAVPEAKKTAVLLLAHGTPENPDQIPEYLRYVTG
Ga0302202_1013559613300028762BogMTDCPLNLAGECYCANRVSSFGAGKLPGKTAVLLLAHGSPDNPEQVPEFLN
Ga0302222_1027449923300028798PalsaMTACPLGLASQCYCENKVSSFGSAKSPAKTAVLLLAHGSPENP
Ga0302257_109415713300028855FenMRNCPLGPIAQCYCANQVSSFSIAASKTAVLLLAHGTPE
Ga0302291_1024624113300028865FenMRNCPLGPIAQCYCANQVSSFSIAASKTAVLLLAHGTPESPSQIPEYLGYVTGG
Ga0311327_1092223313300029883BogMTPCPLGLAGQCYCANQASSFSAEPAKANAAVLLLAHGSPENP
Ga0311338_1012642913300030007PalsaMTACPLGLAARCYCANRINSFASEKLPAQTAVLLLAHGSPENPGQIPEFLSYVT
Ga0302306_1012379623300030043PalsaMTNCPLGLAGQCYCANHVSSFPAQPASATSAKTAVLLLAHGSPENPGQIPEFLSYVTG
Ga0302191_1023534423300030049BogMTDCPLNLAGECYCANRVSSFGAGKLPGKTAVLLL
Ga0311353_1016477733300030399PalsaMTACPLGLASQCYCENKVSSFGSAKSPAKTAVLLLAHGSPENPD
Ga0311372_1220076123300030520PalsaMTACPLGLASQCYCENKVSSFGSAKSPAKTAVLLLAN
Ga0311357_1051522723300030524PalsaMRLQALRGTEMTACPLGLASQCYCENKVSSFGSAKSPAKTAVLLLAHGSPENPDQIPEFL
Ga0311354_1035103513300030618PalsaMTACPLGLASQCYCENKVSSFGSAKSPAKAAVLLLAHGSPENPD
Ga0310039_1037892123300030706Peatlands SoilMTACPLGLAGQCYCANRVSAFASSAAQPAKTAVLLLAHGSPEN
Ga0265316_1004013913300031344RhizosphereMTACPLGLASQCYCANQVSSFAAAGQSSQLSAKTAVLLLAHGSP
Ga0334804_076119_781_9063300033818SoilMTPCPLGLAGQCYCANQASSFSAEPAKANAAVLLLAHGSPEN
Ga0370483_0045672_1227_13673300034124Untreated Peat SoilMTPCPLSLAGECYCANRVSSFGAGKLPAKTAVLLLAHGSPDNPEQVP


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