Metagenome / Metatranscriptome Family F097832

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F097832
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	58 residues
Representative Sequence	MDLRALVVCPDQDSAALLTLILSELGMAAEHTPSISRGLELLDGQHFDAIVLDYRADQ
Number of Associated Samples	90
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.85 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	85.58 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (58.654 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (21.154 % of family members)
Environment Ontology (ENVO)	Unclassified (44.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (42.308 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.74% β-sheet: 18.60% Coil/Unstructured: 54.65%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
c.23.1.1: CheY-like	d1m5ta_	1m5t	0.9
c.23.1.1: CheY-like	d1m5ta_	1m5t	0.9
c.23.1.0: CheY-like	d3a0ua_	3a0u	0.88
c.23.1.0: CheY-like	d7c1ja_	7c1j	0.88
c.23.1.0: CheY-like	d3a0ua_	3a0u	0.88
c.23.1.0: CheY-like	d7c1ja_	7c1j	0.88
c.23.1.1: CheY-like	d2r25b_	2r25	0.86
c.23.1.0: CheY-like	d7l9ca_	7l9c	0.86
c.23.1.1: CheY-like	d2r25b_	2r25	0.86
c.23.1.0: CheY-like	d7l9ca_	7l9c	0.86

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07963	N_methyl	23.08
PF13544	Obsolete Pfam Family	5.77
PF14534	DUF4440	2.88
PF03544	TonB_C	0.96
PF07045	DUF1330	0.96
PF13633	Obsolete Pfam Family	0.96
PF03814	KdpA	0.96
PF04397	LytTR	0.96
PF11376	DUF3179	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.96
COG2060	K+-transporting ATPase, KdpA subunit	Inorganic ion transport and metabolism [P]	0.96
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.65 %
Unclassified	root	N/A	41.35 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	52.88 %
Unclassified	root	N/A	41.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	48.08 %
Unclassified	root	N/A	41.35 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.88 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.08 %
Unclassified	root	N/A	41.35 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.88 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.08 %
Unclassified	root	N/A	41.35 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.88 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.08 %
Unclassified	root	N/A	41.35 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	1.92 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.92 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.08 %
Unclassified	root	N/A	41.35 %
unclassified Candidatus Sulfotelmatobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter	1.92 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.96 %
Agrobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium	0.96 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.08 %
Unclassified	root	N/A	41.35 %
Candidatus Sulfotelmatobacter sp. SbA7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1.92 %
Agrobacterium larrymoorei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium larrymoorei	0.96 %
Rhizobium grahamii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium grahamii	0.96 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005174\|Ga0066680_10349483	All Organisms → cellular organisms → Bacteria → Proteobacteria	943	Open in IMG/M
3300005471\|Ga0070698_101753908	Not Available	573	Open in IMG/M
3300005610\|Ga0070763_10817464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium grahamii	551	Open in IMG/M
3300005764\|Ga0066903_100170319	All Organisms → cellular organisms → Bacteria	3183	Open in IMG/M
3300005994\|Ga0066789_10006051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5338	Open in IMG/M
3300005994\|Ga0066789_10365998	Not Available	602	Open in IMG/M
3300006047\|Ga0075024_100511894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300006052\|Ga0075029_101258511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300006086\|Ga0075019_10659897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Agrobacterium → Agrobacterium larrymoorei	659	Open in IMG/M
3300006174\|Ga0075014_100971382	Not Available	513	Open in IMG/M
3300006796\|Ga0066665_10755932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300006797\|Ga0066659_11418627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	580	Open in IMG/M
3300009525\|Ga0116220_10251022	Not Available	772	Open in IMG/M
3300009631\|Ga0116115_1015680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2231	Open in IMG/M
3300009632\|Ga0116102_1197986	Not Available	540	Open in IMG/M
3300009643\|Ga0116110_1143905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	790	Open in IMG/M
3300009644\|Ga0116121_1015653	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2449	Open in IMG/M
3300010343\|Ga0074044_10024662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4298	Open in IMG/M
3300010379\|Ga0136449_101831155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300011120\|Ga0150983_15215473	Not Available	807	Open in IMG/M
3300012199\|Ga0137383_10632925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300012362\|Ga0137361_11135353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	703	Open in IMG/M
3300012918\|Ga0137396_10892650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300012925\|Ga0137419_10066381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2387	Open in IMG/M
3300012925\|Ga0137419_11901097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300014155\|Ga0181524_10056030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2454	Open in IMG/M
3300014158\|Ga0181521_10293052	Not Available	838	Open in IMG/M
3300014162\|Ga0181538_10528030	Not Available	620	Open in IMG/M
3300014167\|Ga0181528_10751282	Not Available	546	Open in IMG/M
3300014638\|Ga0181536_10382115	Not Available	634	Open in IMG/M
3300016750\|Ga0181505_10126058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300017925\|Ga0187856_1204491	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300017925\|Ga0187856_1269281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300017929\|Ga0187849_1296007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300017933\|Ga0187801_10073382	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300017943\|Ga0187819_10376710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300017943\|Ga0187819_10463914	Not Available	724	Open in IMG/M
3300017946\|Ga0187879_10001314	All Organisms → cellular organisms → Bacteria	17008	Open in IMG/M
3300017946\|Ga0187879_10577591	Not Available	624	Open in IMG/M
3300017948\|Ga0187847_10185692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1134	Open in IMG/M
3300017948\|Ga0187847_10844191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300017955\|Ga0187817_10662418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300017966\|Ga0187776_10232848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300018003\|Ga0187876_1177022	Not Available	728	Open in IMG/M
3300018005\|Ga0187878_1225083	Not Available	691	Open in IMG/M
3300018016\|Ga0187880_1079922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1657	Open in IMG/M
3300018020\|Ga0187861_10099461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1405	Open in IMG/M
3300018020\|Ga0187861_10450909	Not Available	535	Open in IMG/M
3300018021\|Ga0187882_1293489	Not Available	624	Open in IMG/M
3300018024\|Ga0187881_10237568	Not Available	766	Open in IMG/M
3300018030\|Ga0187869_10098321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1480	Open in IMG/M
3300018037\|Ga0187883_10006379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6875	Open in IMG/M
3300018038\|Ga0187855_10399426	Not Available	801	Open in IMG/M
3300018040\|Ga0187862_10044080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3277	Open in IMG/M
3300018047\|Ga0187859_10218438	All Organisms → cellular organisms → Bacteria → Acidobacteria	1019	Open in IMG/M
3300018057\|Ga0187858_10364525	Not Available	904	Open in IMG/M
3300018085\|Ga0187772_10842382	Not Available	664	Open in IMG/M
3300018088\|Ga0187771_11619234	Not Available	550	Open in IMG/M
3300018090\|Ga0187770_10343452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1166	Open in IMG/M
3300019082\|Ga0187852_1417708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300019787\|Ga0182031_1305909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1753	Open in IMG/M
3300019887\|Ga0193729_1025360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2540	Open in IMG/M
3300020579\|Ga0210407_10964425	Not Available	651	Open in IMG/M
3300020581\|Ga0210399_11522196	Not Available	518	Open in IMG/M
3300020583\|Ga0210401_11390254	Not Available	559	Open in IMG/M
3300021088\|Ga0210404_10530037	Not Available	667	Open in IMG/M
3300021088\|Ga0210404_10825658	Not Available	530	Open in IMG/M
3300021432\|Ga0210384_11894367	Not Available	502	Open in IMG/M
3300021478\|Ga0210402_11792348	Not Available	540	Open in IMG/M
3300022521\|Ga0224541_1007766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1152	Open in IMG/M
3300023075\|Ga0224520_1150883	Not Available	507	Open in IMG/M
3300024240\|Ga0224522_1154967	Not Available	522	Open in IMG/M
3300025442\|Ga0208034_1069064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300025454\|Ga0208039_1036991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300025459\|Ga0208689_1043745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300025500\|Ga0208686_1001070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	11468	Open in IMG/M
3300025500\|Ga0208686_1054954	Not Available	920	Open in IMG/M
3300025612\|Ga0208691_1138916	Not Available	548	Open in IMG/M
3300026360\|Ga0257173_1044421	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300026498\|Ga0257156_1024974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300026557\|Ga0179587_10155343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1428	Open in IMG/M
3300027616\|Ga0209106_1023704	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1342	Open in IMG/M
3300027648\|Ga0209420_1096032	Not Available	845	Open in IMG/M
3300027648\|Ga0209420_1151955	Not Available	634	Open in IMG/M
3300027737\|Ga0209038_10268617	Not Available	510	Open in IMG/M
3300027882\|Ga0209590_10803676	Not Available	597	Open in IMG/M
3300027889\|Ga0209380_10582191	Not Available	649	Open in IMG/M
3300027898\|Ga0209067_10490861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300027911\|Ga0209698_10716341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	761	Open in IMG/M
3300027911\|Ga0209698_11389637	Not Available	512	Open in IMG/M
3300028780\|Ga0302225_10152717	Not Available	1119	Open in IMG/M
3300028780\|Ga0302225_10428363	Not Available	620	Open in IMG/M
3300029817\|Ga0247275_1007344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4703	Open in IMG/M
3300030053\|Ga0302177_10336675	Not Available	799	Open in IMG/M
3300031708\|Ga0310686_104850291	Not Available	982	Open in IMG/M
3300031708\|Ga0310686_117559456	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300031754\|Ga0307475_10059906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2885	Open in IMG/M
3300031820\|Ga0307473_10299057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1012	Open in IMG/M
3300031902\|Ga0302322_100648141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1247	Open in IMG/M
3300032160\|Ga0311301_12404039	Not Available	594	Open in IMG/M
3300032160\|Ga0311301_12910713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300032782\|Ga0335082_10505913	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070	Open in IMG/M
3300033004\|Ga0335084_10040662	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4781	Open in IMG/M
3300033486\|Ga0316624_10502712	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7	1037	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.88%
Aquatic	Environmental → Aquatic	47.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.15%
Freshwater	Environmental → Aquatic → Freshwater	40.38%
Sediment	Environmental → Aquatic → Sediment	6.73%
Peat	Environmental → Terrestrial → Peat	6.73%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	40.38%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	27.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.58%
Loam	Environmental → Terrestrial → Soil → Loam	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.73%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	26.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.58%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.69%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.73%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	21.15%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.65%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	6.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.88%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022521	Peat soil microbial communities from Stordalen Mire, Sweden - 717 E3 20-24	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300024240	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300025500	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)	Environmental	Open in IMG/M
3300025612	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10 (SPAdes)	Environmental	Open in IMG/M
3300026360	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-B	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066680_103494833	3300005174	Soil	MDLRALVVCPDQDSATLLTLILSELGMAAEHTASMSRGLELVDSQHFDAIVLDYR
Ga0070698_1017539082	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDLRVLVVCPDQDAADLLSQLLSEVGIEAEHTVSIAGGLERVHEQPFDAVILDYRADQSSQNFL
Ga0070763_108174641	3300005610	Soil	MDLRALVVCPDQDAASLLMLILSEMGMAAEHTPSISRGLELLESEQFSAVILDYRADQSS
Ga0066903_1001703191	3300005764	Tropical Forest Soil	MMELNVLVVCPEQGSADLLSSVLGEMGMKAEHTSSISRGLERINEEQFDAVVLDYHANQSSEQFLSR
Ga0066789_100060511	3300005994	Soil	MDLRALVVCPVQDAAGLLTLIQSEMGMAAEHTASISRGLELIDSQRFDAVVLD
Ga0066789_103659981	3300005994	Soil	MDLRALVVCPVQDSAGLLTLIQSEMGMAAEHTASISRGLELIDSQRFDAVVLD
Ga0075024_1005118941	3300006047	Watersheds	MDLRVLVVCPDQDSANLLRTVLAEMEVKAEHTPSISRGLERLQAESFDAVILD
Ga0075029_1012585112	3300006052	Watersheds	MDLRVLVVCPDQDSAGLLTAVLSEMGMAVENTPSVSRGLELLGDQQFDAIVLDY
Ga0075019_106598971	3300006086	Watersheds	MDLRALVVCPDQDSASLLTLVLSEMGMTAEHTPSISRGLELLDSQRFDAIVLDYR
Ga0075014_1009713822	3300006174	Watersheds	MDPSCLVVCPDQDAASLLTLILSELEMSAEHTPSISRGLELIDSQHFDAIVFDYRADQ
Ga0066665_107559321	3300006796	Soil	MDLRALVVCPDQDSATLLTLILSELGMAAEHTASISRGLELVDSQHFDAIVLDYRADQSSEEFFA
Ga0066659_114186272	3300006797	Soil	MDLRALVVCPDQDSATLLTLILSELGMAAEHTALMSRGLELVDSQHFDAIVLDYRADQSSEEFFA
Ga0116220_102510221	3300009525	Peatlands Soil	MEPSCLVVCPDQDAASLLTLILSELGMTAEHTPSVSRGLELLESRHFDAIIINYRADQSCDE
Ga0116115_10156805	3300009631	Peatland	MDLRALVVCPDQDSASLLTLILSELGMAAEHASSISRGLELLDSQHFDAVVLDYRADQGSEDF
Ga0116102_11979861	3300009632	Peatland	MDLSALVVSPDQETANLLTLILSELGMAAEHTPSISRGLELLDSQRFDAIILDYRADQS
Ga0116110_11439052	3300009643	Peatland	MDLRALVVCPDQDSASLLGLILSEMGMAVEHTPSISRGLELLESQRFDAIVLDYRADRSS
Ga0116121_10156531	3300009644	Peatland	MDVTALVVCADQESANLLTHILSELGMTVEHSPSISRGLELLESRRFDAIVLDY
Ga0074044_100246621	3300010343	Bog Forest Soil	MDLRALVVCSDQDSAGLLTLILSELGLAAEHTPSIFRGLELLEGQHFDVVVLDY
Ga0136449_1018311552	3300010379	Peatlands Soil	MDLRALVVCPDQDSASLLTLVLSEMGMTAEHTPSISRGLELLDSQRFDAIVLDYRADQSSEEFLA
Ga0150983_152154732	3300011120	Forest Soil	MDLRALVVCPDQDSASLLMLSLSELGMVAEHTPSISHGMELLESRRFDAIVLDY
Ga0137383_106329252	3300012199	Vadose Zone Soil	MDLRVLVVCPDQESAKLLSLVLGEMEMTAEHAPSISRGLERLNDENFEAVILDYRADLDS
Ga0137361_111353532	3300012362	Vadose Zone Soil	MDLRALVVCPDQDSATLLTLILSELGMAAEHTASMSRGLELVDSQHFDAIVLDYRADQSS
Ga0137396_108926501	3300012918	Vadose Zone Soil	MDLRVLVVCPDQDSANLLTTVLAEMEIAAEQASSISRGLERMHEESFDAVILDYRADESWEEF
Ga0137419_100663815	3300012925	Vadose Zone Soil	MDLRVLVVCPDQDSAKLLGTVLTEMEIASEQESSISRGLERMQEETFDAVILDYRADESW
Ga0137419_119010971	3300012925	Vadose Zone Soil	MDLRALVVCPDQDSAALLTLILCELGMAAEHTPSITRGLELLDGQHFDAIVLDYRADQSSEVFFT
Ga0181524_100560301	3300014155	Bog	MDLRALVVCPDQDAAGVLTLILSELGMAVEHTPSISRGVELLDSRRFDTIVLDY
Ga0181521_102930522	3300014158	Bog	MDLSALVVSPDQETANLLTLILSELGMAAEHTPSISRGLELLDSQRFDAIILD
Ga0181538_105280301	3300014162	Bog	MDLRALVVSPDQDSASLLTLILSELGMAAEHTPSISRGLELLDNERFDAIILDYRADQSSEE
Ga0181528_107512821	3300014167	Bog	MDLRALVVCPDQDSAKLLMMILAELGLAAEHTPSITRGKEMLESEHFDVIVL
Ga0181536_103821151	3300014638	Bog	MDLCALVVCPEQDVETLLTLILSEMGMVGEHTASLSEGLELIESRHFDAIVLD
Ga0181505_101260582	3300016750	Peatland	MDPSCLVVCPDQDAASLLTLVLSELGMAAEHTASISRGLELLEGQRFDAIVFDYRADQSS
Ga0187856_12044912	3300017925	Peatland	MDRCALVVCPDQDSASLLTLILSEMGMAAEHTPSISRGLELLDSQHFDAIILDYRADRSS
Ga0187856_12692812	3300017925	Peatland	MDRRALVVCPDQDSASLLTLILSEMGMAAEHTPSISRGLELLDSQHFDAIILDYRADRSS
Ga0187849_12960071	3300017929	Peatland	MDLRALVVCPDQDSASLLMLILAEMGMAAEHTPSISRGLELLDSQRFDAV
Ga0187801_100733822	3300017933	Freshwater Sediment	MDQRGLVVCPDQDSESLLALILSELGMAAEHTPSIARGLELLDSRPFDAIVLDYRAD
Ga0187819_103767101	3300017943	Freshwater Sediment	MDLRVLLVCPDQDSANLLTLILPEMGMVAEHTPSISRASQQLNEQRFDAIILDYHSDQSS
Ga0187819_104639141	3300017943	Freshwater Sediment	MDLRALVVCPDQDSVSLLALILSELGMAAEHTPSISRGLELIDSQHFDA
Ga0187879_100013141	3300017946	Peatland	MDLRALVVCPDQDSASLLTLILSEMGMVVEHTPSIFRGLELLDSQRFD
Ga0187879_105775911	3300017946	Peatland	MDVTALVVCSDQESASLLTLILSDLGMAVEHSPSISRGLELLETRRFDAIVLDYRADQSS
Ga0187847_101856921	3300017948	Peatland	MDLRALVVCPDVDSAGLLTLILSELGMVVEHTPSISGGIELLESRHYDGIVLDYRADQGSEEFL
Ga0187847_108441911	3300017948	Peatland	MDLRALVVCPDEDSAGLLTLILSELGMVVEHTPSISGGIELLESRHYDGIVLDYRADQGSEEF
Ga0187817_106624182	3300017955	Freshwater Sediment	MDLRVLLVCPDQDSANLLTLILPEMGMVAEHTPSISRASQQLNEQRFDAIILDYHSDQSSQEFLSRW
Ga0187776_102328483	3300017966	Tropical Peatland	MELRALVVCPDQDSANLLSPVLGEMGMQAEHTPSISRGLERLNEEHFDAVILDYHANQSSEDF
Ga0187876_11770221	3300018003	Peatland	MDLRALVVCPDQDSASLLMLILSEMGIAAELTPSISRGLELLDSQRFDAIVLDYRADQSS
Ga0187878_12250832	3300018005	Peatland	MDLRALVVCPDQDSASLLTLILSELGMAAEHASSISRGLELLDSQHFDAVVLDYRADQGS
Ga0187880_10799221	3300018016	Peatland	LLLAPTLSYHAVTMGLRALVVCPDQDSASLLTLILSELGMAAEHASSISRGLELLDSQHFDAVVLDYRADQGSEDF
Ga0187861_100994611	3300018020	Peatland	MDLRALVVCPDQDSASLLMLILAEMGMAAEHTPSISRGLELLDSQRFDAVVLDYRADRSSEE
Ga0187861_104509091	3300018020	Peatland	MDLRALVVCPDQGSASLLTLILSELGMAVEHTPSISCGLELLDSQHFDA
Ga0187882_12934891	3300018021	Peatland	MEPCCLVVCPDQDAANMLTLILAELGMVAEHTPSVSRGLELLESRHFDA
Ga0187881_102375681	3300018024	Peatland	MDLRALVVCPDQDSASLLMLILSEMGIAAELTPSISRGLELLDSQRFDAIVLDYRADQSSEEFLARL
Ga0187869_100983213	3300018030	Peatland	MDLCALVVCPDQDSASLLTLILSEMGMVVEHTPSIFRGLELLDSQRFDAIVLDYRADQSSEEF
Ga0187883_100063796	3300018037	Peatland	MDLRALVVCPDQDSASLLTLILSEMGMVVEHTPSIFRGLELLDSQRFDAIVLD
Ga0187855_103994262	3300018038	Peatland	MDPICLVVCPDQDAAGLVTLVLSEIGMAAEHTASLSHGLELLDSRHFDAIIFDYRADPSSDEFMARLRQS
Ga0187862_100440801	3300018040	Peatland	MDLRALVVCPDQDSASLLTLILSEMGMVVEHTPSIFRGLELLDSQRFDAIVLDYR
Ga0187859_102184382	3300018047	Peatland	MDLRALVVCPDQDSAGLLTLILSELGMTVEHTSSISRGLELLETEHYDGIVFDYRADQGSEEFLSSLRRS
Ga0187858_103645251	3300018057	Peatland	LAPGVFHNAGIMDLRALVVCPDVDSAGLLTLILSELGMVVEHTPSISGGIELLESRHYDG
Ga0187772_108423822	3300018085	Tropical Peatland	MDVRALVVCSDRESTSLLTTVLSEKGMTVEATASISRGLELLA
Ga0187771_116192341	3300018088	Tropical Peatland	MDLRALVVCPDQDSASVLMLILSEMGMAAEHTPSISRGIELLDSQRFDAIVLD
Ga0187770_103434522	3300018090	Tropical Peatland	MDLRALVVCPDQDSASLLTLILSEMGMAVEFTPSIFRGLELLDGQRFDAIVLDYRADQSSEEF
Ga0187852_14177081	3300019082	Peatland	MDPRALVVCSEEKSASLLMAVLSELGMAAEHAPSISRGLELVDSQRFDAIVLDYRA
Ga0182031_13059094	3300019787	Bog	MEQRALVVCPDEDSGSLLALILSEMGMAAEHTSSISRGMELFDSQLSTPSSS
Ga0193729_10253601	3300019887	Soil	MDLRALVVCPDKDSATLITLILSELGMAAEHTPSISCGIALLDSQHFDAIVLDYRADQGSEQ
Ga0210407_109644251	3300020579	Soil	MDLRALVVCPDQDSAALLTLILSELGMAAEHTPSISRGLELLDGQHFDAIVLDYRADQ
Ga0210399_115221961	3300020581	Soil	MDLRALVVSPDQESSNLLTLILSELGVATEITASIQGGLKLLEHQRFDAIVLDYRG
Ga0210401_113902541	3300020583	Soil	MDLRALVVCPDQDSAALITLILSELGMAAEHTPSISCGVALLDSQHFDAI
Ga0210404_105300371	3300021088	Soil	MDLRALVVCPDKDSAALITLILSELGMAAEHTPSISCGMELVDSQHFDAIVLDYRADQGSEQFFTC
Ga0210404_108256581	3300021088	Soil	MDLRALVVCPDQDSAALITLILSELGMAAEHTPSISCGVALLDSQHFDAIVLDYRAD
Ga0210384_118943671	3300021432	Soil	MDLRALVVCPDQDAANLLTLILTELGMASEHSPSISRGLELLESEHFDAIVLDYQADQSSEEFLA
Ga0210402_117923481	3300021478	Soil	MDLRALVVCPDQDSAALITLILSELGMAAEHTPSISCGVALLDSQHFDAIVLDY
Ga0224541_10077661	3300022521	Soil	MDLSALVVCPDQDSAGLLMLILSELGMVAEQTPSITRGLELLESRHFDAIVLDYRADQSSDKFLVQ
Ga0224520_11508831	3300023075	Soil	MDLRALVVCPDQDSANLLMLILSELGMAAEHTPSISHGVELLDSQHFDAVV
Ga0224522_11549671	3300024240	Soil	MDLRALVVCPDQDSANLLMLILSELGMAAEHTPSISHGVELLDSQHFDAVVLDYRADQS
Ga0208034_10690641	3300025442	Peatland	MDRRALVVCPDQDSASLLTLILSEMGMAAEHTPSISRGLELLDSQHFDAIIL
Ga0208039_10369912	3300025454	Peatland	MDRRALVVCPDQDSASLLTLILSEMGMAAEHTPSISRGLELLDSQHFDAIILDYRADRSSEAFLARIRQS
Ga0208689_10437451	3300025459	Peatland	MDRCALVVCPDQDSASLLTLILSEMGMAAEHTPSISRGLELLDSQHFDAI
Ga0208686_10010701	3300025500	Peatland	MDLRALVVCPDQDSASLLMLILAEMGMAAEHTPSISRGLELLDSQRFDAVVL
Ga0208686_10549541	3300025500	Peatland	MDLRALVVCPDQDSASLLMLILSEMGIAAELTPSISRGLELLDSQRFDAIVLD
Ga0208691_11389162	3300025612	Peatland	MDLRALVVCPDQDSASLLTLTLSELGVAAEHTPSIAQGIELLESQHFDAIVLDYR
Ga0257173_10444211	3300026360	Soil	MDLRVLVVCPDQESAKLLSLVLGEMEMTAEHAPSISRGLERLNDENFEAVIL
Ga0257156_10249743	3300026498	Soil	MDLRVLVVCPDQDSAKLLSLVLGEMEMTAEHTPSVSRGLERLNEESFEAVILDYRADLDSEEF
Ga0179587_101553431	3300026557	Vadose Zone Soil	LPLTLSYHTVTMDLRALVVCPDQDSASLLMQILSELGMAAEHTPSISRGLELLDSQHFDAIVLDNRADQSSEQFL
Ga0209106_10237041	3300027616	Forest Soil	MDLRALVVCPDQDAAALLTLIFSELGMAAEHTPSISRGLELLDSQHFDAIVLDYRADQSSEV
Ga0209420_10960321	3300027648	Forest Soil	VVCPDQDSTSLSELILSEMGMSAQHTSSISRGLECLDNQHFDA
Ga0209420_11519551	3300027648	Forest Soil	MDLRALVVCLDQESANLLTLSLSELGILAESVSSPAEGLELLESHHFNAIVLDYRADQNS
Ga0209038_102686171	3300027737	Bog Forest Soil	MEPSCLVVCPDQDAANLLMLILSELGMAAEYTPSVSRGLELLESRHYDAIILD
Ga0209590_108036762	3300027882	Vadose Zone Soil	MDLRALVVCPDQDSATLLTLILSELGMAAEHTPSISRGLELVDSQHFDAIVLDYRADRSS
Ga0209380_105821911	3300027889	Soil	MDLRALVVCPDQDSASLLMLSLSELGMAAEHTPSISHGMELLESRRFDAIVLDYGADQSS
Ga0209067_104908611	3300027898	Watersheds	MDLRALVVCPDQDSASLLTLVLSEMGMTAEHTPSISRGLELLDSQRFDAIVLDYRADES
Ga0209698_107163411	3300027911	Watersheds	MDLRVLLVCPDQDSANLLNLILPEMGMVAEHTASISRALQQLDEQRFDAII
Ga0209698_113896371	3300027911	Watersheds	MDLRALVVCPDQDSASVLTLILSELGLVCESTPSISRGLELLDSQQYDAIVLDYRADQS
Ga0302225_101527173	3300028780	Palsa	MDLRALVVCPDQDSAKLLSVVLSELGMTVDHTPSISRGFELVESQRFDAIVF
Ga0302225_104283631	3300028780	Palsa	MDLSALVVCPDQDSAGLLMLILSELGMVAEQTPSITRGLELLESRHFDAIILDYRADQSSDK
Ga0247275_10073445	3300029817	Soil	MDLRALVVCPDQDSASLLMLILAEMGMAAEHTPSISRGLELLDSQRFDAVV
Ga0302177_103366751	3300030053	Palsa	MDLSALVVCPDQDSAGLLMLILSELGMVAEQTPSITRGLELLESRHFDA
Ga0310686_1048502911	3300031708	Soil	MDLRALVVCPDEESAGLLTLILSELGMAVEHTPSISRGLELLETEHYDGIVLDYRADQ
Ga0310686_1175594562	3300031708	Soil	MDLRALVVCPDQDSASLLSLILSELGMAVEHTPSISRGLELLETNHYDGIVLDYRADQGS
Ga0307475_100599064	3300031754	Hardwood Forest Soil	LSTAPTLSYHVVTMDLRALVVCPDQDSVTLLTHILSELGMAAEHTPSISRGLELLDSQRFDAIILDYRADQSSE
Ga0307473_102990572	3300031820	Hardwood Forest Soil	MDLRVLVVCPDQESAKLLSLVLGEMEMTAEHAPSISRGLERLNDENFEAVILDYRAD
Ga0302322_1006481413	3300031902	Fen	MDLRVLVVCPDQDSANLLNSVLAEMEIAAEHTPSISRGLERLHKETFDAVILDYRADQSSEEFL
Ga0311301_124040391	3300032160	Peatlands Soil	MDLCALVVCPDQDSASLLTIILSEMGMAVEHTSSISRGLELLDSRHFDAIVLDYRADQS
Ga0311301_129107131	3300032160	Peatlands Soil	MDLRALVVCPDQDSASLLTLVLSEMGMTAEHTPSISRGLELLDSQRFDAIVL
Ga0335082_105059131	3300032782	Soil	MELRALVVCPDQDSAKMLSTILEEMGIAAELTPSISRGLERLHEQSYDAVILDYRAD
Ga0335084_100406621	3300033004	Soil	MELRALVVCPDQDSAKMLSTILEEMGIAAELTPSISRGLERLHEQSYDAVILDYRADQSSEEFL
Ga0316624_105027121	3300033486	Soil	MDLSALVVCPDQDSASLLALMQSELGMAAEHTTSISCGLELLDSRHFDAIVLDYCADKSSEEFL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097832

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences