NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F097805

Metagenome Family F097805

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F097805
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 45 residues
Representative Sequence MKTTILVYVIALGGVAMIAFGLWELYILIRERVALRHYIPT
Number of Associated Samples 65
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 78.35 %
% of genes near scaffold ends (potentially truncated) 85.58 %
% of genes from short scaffolds (< 2000 bps) 85.58 %
Associated GOLD sequencing projects 58
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (74.038 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(35.577 % of family members)
Environment Ontology (ENVO) Unclassified
(69.231 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.769 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 53.62%    β-sheet: 0.00%    Coil/Unstructured: 46.38%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00816Histone_HNS 24.04
PF00589Phage_integrase 7.69
PF13676TIR_2 3.85
PF13701DDE_Tnp_1_4 1.92
PF01753zf-MYND 0.96
PF00239Resolvase 0.96
PF11300DUF3102 0.96
PF04218CENP-B_N 0.96
PF00005ABC_tran 0.96
PF13472Lipase_GDSL_2 0.96
PF13683rve_3 0.96
PF030614HBT 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG2916DNA-binding protein H-NSTranscription [K] 24.04
COG1961Site-specific DNA recombinase SpoIVCA/DNA invertase PinEReplication, recombination and repair [L] 0.96
COG2452Predicted site-specific integrase-resolvaseMobilome: prophages, transposons [X] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.04 %
UnclassifiedrootN/A25.96 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q02JP0JKNot Available516Open in IMG/M
3300005518|Ga0070699_100004627All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria12173Open in IMG/M
3300005764|Ga0066903_101172995All Organisms → cellular organisms → Bacteria1423Open in IMG/M
3300006175|Ga0070712_100560364Not Available964Open in IMG/M
3300006797|Ga0066659_10225080All Organisms → cellular organisms → Bacteria → Proteobacteria1389Open in IMG/M
3300009012|Ga0066710_101550625All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300009012|Ga0066710_102794094All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300010043|Ga0126380_10107182All Organisms → cellular organisms → Bacteria1693Open in IMG/M
3300010046|Ga0126384_10526462All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300010046|Ga0126384_10694294Not Available901Open in IMG/M
3300010046|Ga0126384_10719699All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300010358|Ga0126370_11051107Not Available747Open in IMG/M
3300010359|Ga0126376_11148932All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300010361|Ga0126378_11082629All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria903Open in IMG/M
3300010398|Ga0126383_10129263All Organisms → cellular organisms → Bacteria2318Open in IMG/M
3300010398|Ga0126383_12296310All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300012202|Ga0137363_11123119Not Available668Open in IMG/M
3300012202|Ga0137363_11686737Not Available526Open in IMG/M
3300012210|Ga0137378_11043951All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7731Open in IMG/M
3300012211|Ga0137377_10966187All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7783Open in IMG/M
3300012211|Ga0137377_11552816All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300012532|Ga0137373_10392304All Organisms → cellular organisms → Bacteria1080Open in IMG/M
3300012948|Ga0126375_11134764All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300014268|Ga0075309_1053932Not Available921Open in IMG/M
3300016270|Ga0182036_10281377All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300016294|Ga0182041_10089159Not Available2231Open in IMG/M
3300016294|Ga0182041_11610905All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300016294|Ga0182041_11735402All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300016319|Ga0182033_11564777All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis596Open in IMG/M
3300016341|Ga0182035_10152398All Organisms → cellular organisms → Bacteria1777Open in IMG/M
3300016341|Ga0182035_11039329All Organisms → cellular organisms → Bacteria727Open in IMG/M
3300016357|Ga0182032_10335715All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina widdelii1205Open in IMG/M
3300016357|Ga0182032_11709359All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300016371|Ga0182034_10342775All Organisms → cellular organisms → Bacteria1211Open in IMG/M
3300016387|Ga0182040_10180848All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1533Open in IMG/M
3300016387|Ga0182040_11402460All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300016422|Ga0182039_10682615All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300016422|Ga0182039_11629867Not Available589Open in IMG/M
3300026310|Ga0209239_1260062Not Available598Open in IMG/M
3300026319|Ga0209647_1122706All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300031543|Ga0318516_10589387All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300031545|Ga0318541_10160286All Organisms → cellular organisms → Bacteria1237Open in IMG/M
3300031545|Ga0318541_10360382All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300031545|Ga0318541_10587289All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300031546|Ga0318538_10769760All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300031564|Ga0318573_10140774All Organisms → cellular organisms → Bacteria1261Open in IMG/M
3300031668|Ga0318542_10356803All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300031680|Ga0318574_10916848All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300031719|Ga0306917_10157166All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfosarcina → Desulfosarcina widdelii1692Open in IMG/M
3300031719|Ga0306917_10320381All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300031719|Ga0306917_10322948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 1871195Open in IMG/M
3300031719|Ga0306917_10544145All Organisms → cellular organisms → Bacteria → Proteobacteria912Open in IMG/M
3300031720|Ga0307469_11571481Not Available631Open in IMG/M
3300031724|Ga0318500_10073351All Organisms → cellular organisms → Bacteria → Proteobacteria1508Open in IMG/M
3300031736|Ga0318501_10474771All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300031744|Ga0306918_10205830All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1485Open in IMG/M
3300031744|Ga0306918_11034488All Organisms → cellular organisms → Bacteria → Proteobacteria637Open in IMG/M
3300031744|Ga0306918_11386604All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300031747|Ga0318502_10932626Not Available528Open in IMG/M
3300031770|Ga0318521_10184088All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1200Open in IMG/M
3300031770|Ga0318521_10276523All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium985Open in IMG/M
3300031794|Ga0318503_10210160Not Available631Open in IMG/M
3300031833|Ga0310917_10115717All Organisms → cellular organisms → Bacteria1741Open in IMG/M
3300031833|Ga0310917_10818509All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis628Open in IMG/M
3300031846|Ga0318512_10193714Not Available992Open in IMG/M
3300031879|Ga0306919_10210920All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1447Open in IMG/M
3300031879|Ga0306919_10445405Not Available996Open in IMG/M
3300031879|Ga0306919_10486077All Organisms → cellular organisms → Bacteria951Open in IMG/M
3300031879|Ga0306919_10851812All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300031879|Ga0306919_10867453All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300031879|Ga0306919_10967186All Organisms → cellular organisms → Bacteria → Proteobacteria651Open in IMG/M
3300031879|Ga0306919_11276349Not Available556Open in IMG/M
3300031890|Ga0306925_10092287All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium3216Open in IMG/M
3300031910|Ga0306923_10008816All Organisms → cellular organisms → Bacteria10120Open in IMG/M
3300031912|Ga0306921_10836056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis1049Open in IMG/M
3300031912|Ga0306921_11166855All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300031912|Ga0306921_11897965All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300031941|Ga0310912_11111998All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300031945|Ga0310913_10332864All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300031946|Ga0310910_10637741All Organisms → cellular organisms → Bacteria844Open in IMG/M
3300031946|Ga0310910_10639775All Organisms → cellular organisms → Bacteria842Open in IMG/M
3300031947|Ga0310909_10003240All Organisms → cellular organisms → Bacteria10188Open in IMG/M
3300031947|Ga0310909_10362041All Organisms → cellular organisms → Bacteria1217Open in IMG/M
3300031981|Ga0318531_10387891All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300032001|Ga0306922_10168630All Organisms → cellular organisms → Bacteria2345Open in IMG/M
3300032052|Ga0318506_10064425All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Shewanellaceae → Shewanella → Shewanella xiamenensis1509Open in IMG/M
3300032059|Ga0318533_10173324Not Available1535Open in IMG/M
3300032059|Ga0318533_10881061Not Available657Open in IMG/M
3300032063|Ga0318504_10637492All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300032064|Ga0318510_10455497All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300032068|Ga0318553_10515171Not Available627Open in IMG/M
3300032076|Ga0306924_12048417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Variibacter → Variibacter gotjawalensis588Open in IMG/M
3300032261|Ga0306920_100302338All Organisms → cellular organisms → Bacteria2382Open in IMG/M
3300032261|Ga0306920_101206964Not Available1092Open in IMG/M
3300033289|Ga0310914_10322824All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300033290|Ga0318519_10643329All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300033290|Ga0318519_11028312All Organisms → cellular organisms → Bacteria512Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil35.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil33.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil12.50%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.92%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.92%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.96%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.96%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.96%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.96%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.96%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012532Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300014268Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031668Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031846Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032063Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_052983702170459005Grass SoilMKTTILAYVIALGGAAMIAFGLWGLYILIKERSLNAA
Ga0070699_10000462713300005518Corn, Switchgrass And Miscanthus RhizosphereVTALGGIVMIALGLWGLYILITERASELRLRDYIPTTQTIA
Ga0066903_10117299513300005764Tropical Forest SoilMGWEELVMKTTILVYVIALGGVAMIAFGFWELYILVRERVALRHYIPTTLTIAVG
Ga0066903_10272379143300005764Tropical Forest SoilMKTTILAYLIALGGVAMIVFGLWGLYNLIKERVAELRLRDYMP
Ga0070712_10056036423300006175Corn, Switchgrass And Miscanthus RhizosphereMKTTILAYVIALGGVAMIAFGLWGLYILIKERVAERRLMRDYI
Ga0066659_1022508013300006797SoilMKTTILAYVIALGGAAMIAFGLWGLYILIKERVAERRLMRDYIPT
Ga0066710_10155062543300009012Grasslands SoilMKTTILAYVIALGGAAMIAFGLWGLYILIKERVAERRLMRDYIPTIQTIAVGFGL
Ga0066710_10279409423300009012Grasslands SoilMKTTILAYVIALGGVAMIAFGLWGLYILIKERVAERRLMRDYIPTIQTIAVGFGL
Ga0126380_1010718223300010043Tropical Forest SoilMRWEELAMRTTILAYVIALGGVAMIAFGLWELYILIRERVALRHYIP
Ga0126380_1045327113300010043Tropical Forest SoilMKTSILAYVIGLGGIAMIVFGLWNLYILITERVAELRLRDYI*
Ga0126384_1052646213300010046Tropical Forest SoilMRWEELAMRTTILAYVIALGGVAMIAFGLWELYILIRERVALRHYIPTTLTIAVG
Ga0126384_1069429433300010046Tropical Forest SoilMKTTILAYVIALGGVAMIAFGLWGLYILIRERIALRLS
Ga0126384_1071969913300010046Tropical Forest SoilMKTTILAYVIALGGVAMIVWGLWGHYYLIRERASELR
Ga0126370_1105110723300010358Tropical Forest SoilMKTTILAYVIALGGIAVIALGVWSLYILITERTAEHLE
Ga0126376_1090917923300010359Tropical Forest SoilMKTTILAYVIALGGIAMIVFGLWGHYYLIKERASELRLRITYRRSKQ*
Ga0126376_1114893213300010359Tropical Forest SoilMRWEELAMRTTILAYVIALGGVAMIAFGLWELYILIRERVALRHYIPTTLTIAVGLALIG
Ga0126378_1108262933300010361Tropical Forest SoilMELAMNTTILAYVIALVGVAMIAFGLWGLYILITE
Ga0126379_1049258123300010366Tropical Forest SoilMRWEELAMRTTILAYVIALGGVAMIVCGLWSLYTRVRLAGLRLRDYV
Ga0126383_1012926353300010398Tropical Forest SoilMRTTILAYVIALGGVAMIAFGVWGLYILIKERVAERRLMRDYIPTIQTIA
Ga0126383_1229631023300010398Tropical Forest SoilMRWEGLAMRTTIFAYVIALGGVAMIAFGLWELYILIRERVALRNYIP
Ga0137363_1112311913300012202Vadose Zone SoilMKTTILAYVIAFGGVAMIVVGLWGLSVMVRERVAEL
Ga0137363_1168673723300012202Vadose Zone SoilMKTNILAYLIALGGIALIVLGFWGLYNRITERVAE
Ga0137378_1104395113300012210Vadose Zone SoilMKTTILAYLIALGGVAMIAFGLWGLYILIKERVAERRLMR
Ga0137377_1096618713300012211Vadose Zone SoilMKTTILAYLIALGGVAMIAFGLWGLYILIKERVAERRLMRDYIPTIQTIAVGFGL
Ga0137377_1155281613300012211Vadose Zone SoilMKTTILAYVIALGGAAMIALGLWGLYILIRERVAERRLR
Ga0137373_1039230443300012532Vadose Zone SoilMKTTILAYVIALGGAAMIAFGLWGLYILIKERVAERRLMRDYIP
Ga0126375_1113476413300012948Tropical Forest SoilMRWEELVMRTTILAYVIALGGVAMIAFGLWELYILIRERVALRHYIPT
Ga0075309_105393213300014268Natural And Restored WetlandsMKTTILVYVIAFGGVAMIVFGAWGLYTLITERVSERRLRDYIPTIQAIA
Ga0132256_10139693613300015372Arabidopsis RhizosphereMKTTILAYVIALGGAALNVLGFWGLYTRSTERVAELPLRTY
Ga0182036_1028137713300016270SoilMKTTILVYVIALGGVAMIAFGLWELYILVRERVALRHYIPTTLTIAVGLVL
Ga0182041_1008915913300016294SoilMRTTILAYVIALGGVAMIAFGLWELYILIRERRLRNYIPTVLTIAVGLVLI
Ga0182041_1161090523300016294SoilMKTTILVYVIALGGVAMIAFGLWELYILVRERVALRHYIPTTLTIAVGLV
Ga0182041_1173540223300016294SoilMRTTILAYVIALGGVAMIASGLWELYILIRERVALR
Ga0182033_1156477713300016319SoilMKTTILVYVIALGGIAMIAFGFWELYILVRERVALRHYIPTTLTIAVGLVLI
Ga0182035_1015239813300016341SoilMRTTILAYVMALGGVAMIAFGLWELYILIRERRLRNYIP
Ga0182035_1103932913300016341SoilMKTTILVYVMALGGVAMIAFGLWELYILVRERVALRHYIPTTLTIAVGLVL
Ga0182032_1033571513300016357SoilMKTTILVYVMALGGVAMIAFGLWELYILVRERVALRHYIPTTLTIA
Ga0182032_1170935923300016357SoilMKTTILVYVMALGGVAMIAFGLWELYILVRERVALRH
Ga0182034_1034277533300016371SoilMKTTILVYVIALGGVAMIAFGFWELYILVRERVALRHYIPTTLTIAVGLVLIGLAQAL
Ga0182040_1018084813300016387SoilMRTTILAYVIALGGVAMIAFGLWELYILIRERRLRNYIPTV
Ga0182040_1140246013300016387SoilMKTTILVYVMALGGVAMIAFGLWELYILVRERVALRHYIPTTLTIAV
Ga0182039_1068261513300016422SoilMKTTILVYVIALGGVAMIAFGFWELYILVRERVALRHYIPTT
Ga0182039_1162986713300016422SoilMGRVAIGGVAMIAFGLWELYILIRERVALRHYIPTTLTIAVGLVLIGLAQAL
Ga0209239_126006223300026310Grasslands SoilMKTAILAYVIAFGGVAMIVVGLWGLYILIRERVAEL
Ga0209647_112270613300026319Grasslands SoilMKTTILAYVIALGGAAMIAFGLWGLYILIKERVAERRLMR
Ga0318516_1058938713300031543SoilMRWEELAMRTAILAYAIALGGVAMIAFGLWELYILIRERVAVRH
Ga0318541_1016028613300031545SoilMRTAILAYVIALGGVAMIAFGLWELYILIRERVAVRH
Ga0318541_1036038233300031545SoilMKTTILVYVIALGGVAMIAFGLWELYILVRERVALRHYIPTTLTI
Ga0318541_1058728913300031545SoilMKTTILAYVIALGGVAMIAFGLRGLYILIRERVAERGLRDYIPTIQTIA
Ga0318538_1076976013300031546SoilMKTTILVYVIALGGVAMIAFGLWEVYILIRERVALRHYI
Ga0318573_1014077423300031564SoilRWEELAMRTAILAYAIALGGVAMIAFGLWELYILIRERVAVRH
Ga0318542_1035680313300031668SoilMRTAILAYAIALGGVAMIAFGLWELYILIRERVAVRH
Ga0318574_1091684813300031680SoilMKTTILAYVIALGGVAMIAFGLRGLYILIRERVDPPPLK
Ga0306917_1015716633300031719SoilMKTTILVYVMALGGVAMIAFGLWELYILVRERVALRHYIPT
Ga0306917_1032038133300031719SoilMKTTILVYVIALGGVAMIAFGLWELYILVRERVALRHYIPTTLTIAV
Ga0306917_1032294813300031719SoilMRTTILAYVIALGGVAMIAFGLWELYILIRERRLRNYIPTVLTI
Ga0306917_1054414543300031719SoilMNTTILAYVIALGGVAMIAFGLWGLYILITERVAG
Ga0307469_1157148113300031720Hardwood Forest SoilMKTTILAYVIALGGVTMIAFGLFGLYILIKERVAERRLMRDYIP
Ga0318500_1007335123300031724SoilMGLTVPTNQMRWEELAMRTAILAYAIALGGVAMIAFGLWELYILIRERVAVRH
Ga0318501_1047477113300031736SoilMKTTILVYVIALGGVAMIAFGFWELYILVRERVALR
Ga0306918_1020583013300031744SoilMRTTILAYVIALGGVAMIASGLWELYILIRERVALRH
Ga0306918_1103448823300031744SoilMNTTILAYVIALGGVAMIAFGLWGLYILITERVAGLRLRDY
Ga0306918_1138660413300031744SoilMRTTIVAYVIALGGVAMIAFGLWELYILIRERVALRHYIPTILTIAV
Ga0318502_1093262613300031747SoilMRWEELAMRTAILAYVIALGGVAMIAFGLWELYILIRERVAVRH
Ga0318521_1018408813300031770SoilMRTTILAYVIALGGIAMIAFGLWELYILIRERRLRNYIPTVLTIAVGLV
Ga0318521_1027652313300031770SoilMRTTILAYVMALGGVAMIAFGLWELYILIRERRLRNYIPT
Ga0318503_1021016013300031794SoilMRWEELAMRTTILAYVIALGGVAMIAFGLWELYILIRERVAVRH
Ga0310917_1011571713300031833SoilMKTTILVYVIALGGVAMIAFGFWELYILVRERVALRHYIPTTLTIAVGLVLIGLAQA
Ga0310917_1081850933300031833SoilMKTTILVYVIALGGIAMIAFGFWELYILVRERVALRHYIPTT
Ga0318512_1019371413300031846SoilNQMRWEELAMRTAILAYVIALGGVAMIAFGLWELYILIRERVAVRH
Ga0306919_1021092023300031879SoilMRTTILAYVMALGGVAMIAFGLWELYILIRERRLRNC
Ga0306919_1044540513300031879SoilMGWEEFVMKTTILVYVMALGGVAMIAFGLWELYILVRERVALRHYIPTTLTIAVGLVLI
Ga0306919_1048607713300031879SoilMKTTILVYVIALGGVAMIAFGFWELYILVRERVALRHYIPTTLTIAVGLVLIGLA
Ga0306919_1085181223300031879SoilMKTTILVYVIALGGVAMIAFGLWELYILVRERVALRHYIPTTLTIAVGLVLI
Ga0306919_1086745313300031879SoilMGWEEFVVYVIALGGVAMIASGLWELYILIRERVALRHYIPTTLTIAVGLVLI
Ga0306919_1096718613300031879SoilMNTTILAYVIALGGVAMIAFGLGGLYILITERVAGLRLRDYI
Ga0306919_1127634913300031879SoilMGLTVPTNQMRWEELAMRTAILAYVIALGGVAMIAFGLWELYILIRERVAVRH
Ga0306925_1009228713300031890SoilMKTTILVYVIALGGIAMIAFGFWELYILVRERVALRHYIPTTLTIAVGLVLIGLAQ
Ga0306923_10008816193300031910SoilMRTTILAYVMALGGVAMIAFGLWELYILIRERRLRN
Ga0306921_1083605633300031912SoilMKTTILVYVIALGGIAMIAFGFWELYILVRERVALRHYIPTTLTIAV
Ga0306921_1116685523300031912SoilMGWEELVMKTTILVYVMALGGVAMIAFGLWELYILVRERVALRHYIPT
Ga0306921_1189796513300031912SoilMKTTILVYVMALGGVAMIAFGLWELYILVRERVALRHYIPTTLTIAVGLVLI
Ga0310912_1111199813300031941SoilVIALGGVAMIASGLWELYILIRERVALRHYIPTILTIAVGLVLIGLAQA
Ga0310913_1033286423300031945SoilMKTTILVYVMALGGVAMIAFGLWELYILVRERVALRHYIPTTLTI
Ga0310910_1063774123300031946SoilMKTTILVYVIALGGVAMIAFGFWELYILVRERVALRHYIPTTLTIAV
Ga0310910_1063977513300031946SoilMKTTILVYVMALGGVAMIAFGLWELYILVRERVAL
Ga0310910_1149886113300031946SoilMKTTILAYLIALGGVAMIVYALWGHYILIRERASQLRLRDYMPTIQ
Ga0310909_1000324013300031947SoilMRTTILAYVMALGGVAMIAFGLWELYILIRERRLRNYIPTVLTIAVGLVLIG
Ga0310909_1036204133300031947SoilMKTTILVYVIALGGVAMIAFGLWELYILVRERVALRHYIPTTLT
Ga0318531_1038789123300031981SoilMKTTILVYVIALGGVAMIAFGLWELYILVRERVALRHYIP
Ga0306922_1016863013300032001SoilMKTTILVYVIALGGVAMIAFGLWELYILVRERVALRHYIPTTL
Ga0318506_1006442513300032052SoilMKTTILVYVMALGGVAMIAFGLWELYILVRERVALRHYIPTT
Ga0318533_1017332423300032059SoilMRTTILAYVIALGGVAMIAFGLWELYILIRERRLRNYIPTVLTIA
Ga0318533_1042071513300032059SoilMKTTILAYLIALGGVAMIVYALWGHYILIRERASQLRLRDYMPTI
Ga0318533_1088106113300032059SoilMRTTILAYVMALGGVAMIAFGLWELYILIRERRLRNY
Ga0318504_1063749213300032063SoilMGWEEFVVYVIALGGVAMIASGLWELYILIRERVALRHYIPTTLTIAVGLALIG
Ga0318510_1045549713300032064SoilMKTTILVYVIALGGVAMIAFGLWELYILIRERVALRHYIPT
Ga0318553_1051517113300032068SoilMKTTILAYVIALGGVAMIAFALWGLYILITERAAE
Ga0306924_1204841723300032076SoilMKTTILVYVIALGGIAMIAFGFWELYILVRERVALRHYIPTTLTIAVGL
Ga0306920_10030233813300032261SoilMKTTILVYVIALGGVAMIAFGLWELYILVRERVALRHYIPTTLTIAVG
Ga0306920_10120696413300032261SoilPTNQMRWEELAMRTAILAYAIALGGVAMIAFGLWELYILIRERVAVRH
Ga0310914_1032282413300033289SoilMRTTIVAYVIALGGVAMIAFGLWELYILIRERVALRNYIPTSLTIGV
Ga0318519_1064332923300033290SoilMRTTILAYVIALGGVAMIAFGLWELYILIRERVALRHYIPT
Ga0318519_1102831223300033290SoilMKTTVLAYVIALGGVAIIAFGLWELYTLIRERVAVRHYIPTVLTIAVGLVLI


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