| Basic Information | |
|---|---|
| Family ID | F097783 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 104 |
| Average Sequence Length | 78 residues |
| Representative Sequence | MTKSSVRKAAAEKARSTYRKTTRKVGAGKAHSSGRKTASKAVAEKARGTYRKTAARFEEFAYDAKMPESMRALA |
| Number of Associated Samples | 86 |
| Number of Associated Scaffolds | 104 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 100.00 % |
| % of genes near scaffold ends (potentially truncated) | 1.92 % |
| % of genes from short scaffolds (< 2000 bps) | 1.92 % |
| Associated GOLD sequencing projects | 82 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.23 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (98.077 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.077 % of family members) |
| Environment Ontology (ENVO) | Unclassified (29.808 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (38.462 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 65.69% β-sheet: 0.00% Coil/Unstructured: 34.31% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.23 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 104 Family Scaffolds |
|---|---|---|
| PF09361 | Phasin_2 | 37.50 |
| PF12849 | PBP_like_2 | 2.88 |
| PF04367 | DUF502 | 1.92 |
| PF03330 | DPBB_1 | 0.96 |
| PF01594 | AI-2E_transport | 0.96 |
| PF07080 | DUF1348 | 0.96 |
| COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
|---|---|---|---|
| COG2928 | Uncharacterized membrane protein | Function unknown [S] | 1.92 |
| COG0628 | Predicted PurR-regulated permease PerM | General function prediction only [R] | 0.96 |
| COG3558 | Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamily | Function unknown [S] | 0.96 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 98.08 % |
| All Organisms | root | All Organisms | 1.92 % |
| Visualization |
|---|
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| Scaffold | Taxonomy | Length | IMG/M Link |
|---|---|---|---|
| 3300012951|Ga0164300_10416603 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium | 743 | Open in IMG/M |
| 3300012988|Ga0164306_10496686 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium | 937 | Open in IMG/M |
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| Habitat | Taxonomy | Distribution |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 23.08% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 10.58% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 7.69% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 4.81% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 4.81% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.85% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 3.85% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 3.85% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 2.88% |
| Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.88% |
| Freshwater Sediment | Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment | 1.92% |
| Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.92% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 1.92% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 1.92% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 1.92% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 1.92% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 0.96% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 0.96% |
| Natural And Restored Wetlands | Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands | 0.96% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.96% |
| Tropical Peatland | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland | 0.96% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 0.96% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.96% |
| Groundwater Sand | Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand | 0.96% |
| Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 0.96% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.96% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.96% |
| Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 0.96% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.96% |
| Simulated | Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated | 0.96% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 2088090015 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 2166559005 | Simulated microbial communities from Lyon, France | Engineered | Open in IMG/M |
| 3300000793 | Forest soil microbial communities from Amazon forest - 2010 replicate II A001 | Environmental | Open in IMG/M |
| 3300000890 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000891 | Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
| 3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004785 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Host-Associated | Open in IMG/M |
| 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Host-Associated | Open in IMG/M |
| 3300005365 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG | Environmental | Open in IMG/M |
| 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Environmental | Open in IMG/M |
| 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Host-Associated | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
| 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Environmental | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
| 3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
| 3300009811 | Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 | Environmental | Open in IMG/M |
| 3300010154 | Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010371 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1 | Environmental | Open in IMG/M |
| 3300010396 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2 | Environmental | Open in IMG/M |
| 3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012495 | Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610 | Host-Associated | Open in IMG/M |
| 3300012951 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG | Environmental | Open in IMG/M |
| 3300012955 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG | Environmental | Open in IMG/M |
| 3300012957 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG | Environmental | Open in IMG/M |
| 3300012958 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG | Environmental | Open in IMG/M |
| 3300012960 | Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG | Environmental | Open in IMG/M |
| 3300012961 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG | Environmental | Open in IMG/M |
| 3300012984 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG | Environmental | Open in IMG/M |
| 3300012985 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG | Environmental | Open in IMG/M |
| 3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
| 3300012987 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG | Environmental | Open in IMG/M |
| 3300012988 | Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG | Environmental | Open in IMG/M |
| 3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
| 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Host-Associated | Open in IMG/M |
| 3300015077 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2) | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300017823 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3 | Environmental | Open in IMG/M |
| 3300017933 | Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1 | Environmental | Open in IMG/M |
| 3300018060 | Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG | Environmental | Open in IMG/M |
| 3300018078 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300021478 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M | Environmental | Open in IMG/M |
| 3300022195 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300025953 | Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2 (SPAdes) | Environmental | Open in IMG/M |
| 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027717 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027915 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes) | Environmental | Open in IMG/M |
| 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028589 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1 | Environmental | Open in IMG/M |
| 3300028597 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14 | Environmental | Open in IMG/M |
| 3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
| 3300031858 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2 | Environmental | Open in IMG/M |
| 3300031944 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1 | Environmental | Open in IMG/M |
| 3300031945 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082 | Environmental | Open in IMG/M |
| 3300032003 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1 | Environmental | Open in IMG/M |
| 3300032013 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3 | Environmental | Open in IMG/M |
| 3300032066 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18 | Environmental | Open in IMG/M |
| 3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
| 3300032122 | Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4 | Environmental | Open in IMG/M |
| 3300032180 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515 | Environmental | Open in IMG/M |
| 3300033550 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4 | Environmental | Open in IMG/M |
| 3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
| 3300034643 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034660 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034666 | Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034680 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_116 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| GPICI_03095160 | 2088090015 | Soil | MTKSSVRKAAAKKARSTYRKTTRKVGVGKVHSGDRKTASKVAAEKA |
| cont_0008.00004860 | 2166559005 | Simulated | MNDAINPKVVAEKARGTYRKTARRKTTRKVGTGKAHRTDRKTASKVVAEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTRELYVHSLEAVLESWERFVVAAGQGTLALN |
| AF_2010_repII_A001DRAFT_100370081 | 3300000793 | Forest Soil | MTKSSAPKVAAKKARGTYRKTARKVNAGKAHSSYRKTAPKAAAETARGMYRKTSAQFENFSRGARMPEAVHV |
| JGI11643J12802_105614263 | 3300000890 | Soil | AAAKKARSTYRKTTRKVGVGKVHSGDRKTASKVAAEKARGTYRKTAARFEGFAYDAQMPESMR |
| JGI10214J12806_126672273 | 3300000891 | Soil | MTKSSAHKAAAEKTRGTYRKNARKVGAGKAHSKNRKAAPKAVAERARGTYRKTAARFEGFAYDAQMP |
| JGI1027J12803_1014096513 | 3300000955 | Soil | MTKSSAHKAAAEKTRGTYRKNARKVGAGKAHSKNRKAAPKAVAERARGTYRKTAAPFEGFAYDAQMP |
| Ga0062593_1015082633 | 3300004114 | Soil | MTKSSAHKAAAEKTRGTYRKNARKVGAGKAHSKNRKAAPKAVAERARGTYRK |
| Ga0062590_1015525142 | 3300004157 | Soil | MTKSSAHKAAAEKTRGTYRKNARKVGAGKAHSKNRKAAPKAVAERARGTYRKTAAPFEGFAYDAQMPESMRAL |
| Ga0063356_1025166661 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MTKSSARKAAAQKARSTYRKTARKVGARKAHSGDRKTASKVATEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTREFYVHSLEAVLESWERFVVA |
| Ga0058858_11240142 | 3300004785 | Host-Associated | MTKSSARKAAAKKARSTYRKTTRKVGAAKTLNSGRKTASKAVAETALGTYRKTAA |
| Ga0070670_1013631601 | 3300005331 | Switchgrass Rhizosphere | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARSSARKTASKTLAESARDNYRKTGARFEQFAYDAQMPESMRALAENSIAQV |
| Ga0070668_1017104352 | 3300005347 | Switchgrass Rhizosphere | MTKSSARKAAAKKARSTYRKTTRKVGAAKTLNSGRKTASKAVAETALGTYRKTAARFEEFAYDAQMPES |
| Ga0070688_1014395141 | 3300005365 | Switchgrass Rhizosphere | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARSSARKTASKTLAESARDNYRKTGARFEQFAYDAQMPESMRALAENSIAQVRELYAYSLEAALENWERFTLAAGQGTVALNRRAIDIARRNINNGIGLAERLAG |
| Ga0070695_1017409101 | 3300005545 | Corn, Switchgrass And Miscanthus Rhizosphere | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARSSARKTASKTLAESARDSYRKTGARFEQFAYDAQMPESMRALAENSIAQVRELYAYSLEAALENWERFTLAAGQGTVALNRRAIDIARR |
| Ga0068856_1010970341 | 3300005614 | Corn Rhizosphere | MTKSSARKAAAKKARSTYRKTTRKVGAAKTLNSGRKTASKAVAETALGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQ |
| Ga0068861_1003613203 | 3300005719 | Switchgrass Rhizosphere | MTKSSVRKAAPRNTHRNTTRKIGARKAHSGDRKTTSKVATEK |
| Ga0068858_1017827551 | 3300005842 | Switchgrass Rhizosphere | MTKSSVRKAAPRNTHRNTTRKIGARKAHSGDRKTTSKVATEKARGTYRKT |
| Ga0070712_1011559761 | 3300006175 | Corn, Switchgrass And Miscanthus Rhizosphere | MTKSSARKAAAEKARSTYRKTARKVGARKAHAGDRKPVSKAVADGARDTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTRELYVHSLEAVLDVKRATAKALVWGGNR* |
| Ga0075425_1001080245 | 3300006854 | Populus Rhizosphere | MTKSSARKAAAEKARSMNRKTARKVGAGKAHRTDRKVASKTVAEKARASYRKTAAQLRNSRCANA* |
| Ga0075425_1004346383 | 3300006854 | Populus Rhizosphere | MTKSSAHKAAAEKTRGTYRKNARKVGAGKAHSKNRKAAPKAVAERARGTYRKTAAPFEGFAYDAQMPESMRALAEKSVAQTRELYVHS |
| Ga0068865_1021249091 | 3300006881 | Miscanthus Rhizosphere | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARSSARKTASKTLAESA |
| Ga0075424_1004871891 | 3300006904 | Populus Rhizosphere | MTKSSARKAAAEKARSMNRKTARKVGAGKAHRTDRKVASKTVAEKARASYRKTAAQ |
| Ga0075424_1006307271 | 3300006904 | Populus Rhizosphere | MTKSSVRKAAAKKARSTYRKTTRKVGVGKVHSGDRKTASKVAAEKARGTYRKTAARFEGFAYDAQMPESMRALAEKSVAQTRELYVHSLEA |
| Ga0075424_1007138441 | 3300006904 | Populus Rhizosphere | MTKSSAHKAAAEKTRGTYRKNARKVGAGKAHSKNRKAAPKAVAERARGTYRKTAARFEGFAYDAQMPESMRALAEKSVAQTRELYVHSLEA |
| Ga0111539_101726002 | 3300009094 | Populus Rhizosphere | MTKSSVRKAAAKKARSTYRKTTRKVGVGKVHSGDRKTASKVAAEKARGTYRKTAARFEGFAYDAQMPESMRALAEKSVAQTRELYVHSLEAVL |
| Ga0105243_127101401 | 3300009148 | Miscanthus Rhizosphere | MTKSSARKAAAKKARSTYRKTTRKVGAAKALNSGRKTASKAVAETALGTYRKT |
| Ga0111538_107637672 | 3300009156 | Populus Rhizosphere | MTKSSVRKAAAKKARSTYRKTTRKVGVGKVHSGDRKTASKVAAEKARGTYRKTAARFEGFAYDAQMPESMRALAEKSVA |
| Ga0111538_122539261 | 3300009156 | Populus Rhizosphere | MTKSSARKAPAEKARGTYRKTTRKVGAKKAHRTNRRAASKT |
| Ga0105237_127309471 | 3300009545 | Corn Rhizosphere | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARSSARKTASKTVAESARDNYRKTGARFEQFAYDAQMPESMRALAENSIAQVRELYADSLEAALENWERFTLAAGQGTVALNRRAIDIARRNINNGIGLAERLAGAK |
| Ga0105249_108864252 | 3300009553 | Switchgrass Rhizosphere | MTKSSARKAVAEKARATYRKTARKVSAGKAHSRDRKTASKVVAEKAGGTYRKTAAQFEEFARDAQMPESLRALAEKSVAQTRALCEHSLETVLESWERFVVAAGQG |
| Ga0105084_11155781 | 3300009811 | Groundwater Sand | MTKSSAGKAAAKKARGTHRKTARKVGAGKAHSRDRTTASKVVAEKARGTYRKTAAEFEEFASDTQMPESVRALA |
| Ga0127503_105577671 | 3300010154 | Soil | MTKSSVRKAAAEKARSKYRKTTRKVGAGKAHSSGRKTASKAV |
| Ga0134125_121959721 | 3300010371 | Terrestrial Soil | MTKSSVRKAAPRNTHRNTTRKIGARKAHSGDRKTTSKVATEKARGTYRKTAARFEELAYDGQMPESMRALAEKSV |
| Ga0134126_119686361 | 3300010396 | Terrestrial Soil | MTKSSARKAAAEKAKSTYRKTARKVGARKAHAGDRKTVSKAVAEGARDTYRKTAARFEEFAYGAQMPESMRALAEKSVAQTREF |
| Ga0150983_119766812 | 3300011120 | Forest Soil | MTKSSVRKAAAEKAPATDRKTARKVRAGKARGKVRKTAPKAVAEKALGTYRETAAKFEEFTRHAQ |
| Ga0150985_1017631012 | 3300012212 | Avena Fatua Rhizosphere | MTKSSARKAAAKKARSTYRKTTRKVGAAKTLNSGRKTASKAVAETALGT |
| Ga0157323_10498781 | 3300012495 | Arabidopsis Rhizosphere | MTKSSARKAPAEKARGTYRKTTRKVGAKKAHSTNRRAASKTVAEKARATYRKTAAQFEEFARDAQMPESMRALAEKSVSQTRELYVHSLEAVLESWEGFV |
| Ga0164300_104166032 | 3300012951 | Soil | MNDAINPKVAAEKPRDAHRKTARRKTTRKVGTGKAHRTDRKTASKAVAEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTWELYVHSLEAVLESWERFVVAAGQGTVALNCKAIDIARRNINT |
| Ga0164300_111368051 | 3300012951 | Soil | MTKSSARKAAAQKARSTYRETARKVGATKAHSGDRKTASKVAKEKVRGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTWELYVHSLEAVLESWDRFVV |
| Ga0164298_101461682 | 3300012955 | Soil | MTKSSARKAAAEKARSTYRKTTRKVGTEKAHRTDRKTASK |
| Ga0164303_100580144 | 3300012957 | Soil | MTKSSARKAAAKKARSTYRKTTRKVGAAKALNSGRKTASKAVAETALGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTREFYVHSFEAVLESWERFVVAAGQGAL |
| Ga0164303_109407591 | 3300012957 | Soil | MKSSTRKAAAAEKASGTYRKIARRKTARKVGAAKAHSRDRKTASKVVAEKARGTYRKTAAQFEEFARDAQMPESMRALAEKTVVQTRELYVHS |
| Ga0164299_102729431 | 3300012958 | Soil | MTKSSARKAAAEKARSTYRKTTRKVGTEKAHGSDRKTASRAVAEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTWELYVHSLEAVLESWERFVVAAGQGTVALNCKAIDIARRNINTSF |
| Ga0164299_106359782 | 3300012958 | Soil | MTKSSVRKTAAEKARSTYRKTRKVGTGKANGGDRKTASRAVAERARGTY |
| Ga0164299_108166421 | 3300012958 | Soil | MTKSSIRKAAAEKARSTYRKTTRKVGTEKAHGSDRKTASRAVAEKARG |
| Ga0164301_104220181 | 3300012960 | Soil | MTKSSIRKAAAEKARSTYRKTARKVGARKAHSGDRKTASKVAAEKARGTYRKTAACFEELAYDAQMPESMRALAEKSVAQTRELYVHSL* |
| Ga0164301_108243931 | 3300012960 | Soil | MNDAINPKVAAEKARDAHRKTARRKTTRKVGTGKAHRTDRKTASKAVAEKARGTYRKTAARFEEFAYDAQTAESMRALAEKIVAQTWERYVHSLEAVLESWERFVVAAGQGTVALNCKAIDIA |
| Ga0164302_100199466 | 3300012961 | Soil | MTKSSARKAAAEKARSTYRKTTRKVGTEKAHGSDPKTASRAVAEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTWELYVHSLEAVLESWE |
| Ga0164309_103129122 | 3300012984 | Soil | MTKSSIRKAAAEKARSTYRKTARKVGARKAHSGDRKTASKVAAEKARGTYRKTAACFEELAYDAQMPESMRALAEKSVAQTRELYVHSLEAVLDVKRATAKALVWGGNR* |
| Ga0164308_116215461 | 3300012985 | Soil | MTKSSVRKAAAEKAPGTDRKTTRKVRAGKARGKVRKTAPKAVAEKARGTYRETAAKFEEF |
| Ga0164304_100169796 | 3300012986 | Soil | MNDAINPKVAAEKPRDAHRKTARRKTTRKVGTEKAHGSDRKTASRAVAEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTWE |
| Ga0164304_100180281 | 3300012986 | Soil | MTKSSARKAAAEKARSTYRKTTRKVGTEKAHGSDPKTASRAVAEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTWELY |
| Ga0164307_104411781 | 3300012987 | Soil | MTKSSARKAAAKKARSKYRKTTRKVGAAKALNSGRKTASKAVAETALGTYRKTAARFEEFAY |
| Ga0164306_104966862 | 3300012988 | Soil | MNDAINPKVAAEKARDAHRKTARRKTNRKVGTGKAHRTDRKTASKVVAEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTRELYMHSLEAVL |
| Ga0164306_116039642 | 3300012988 | Soil | MTKSSARKAAAEKARSTYRKTARKVGARKAHSGDRKTASKV |
| Ga0164305_100305211 | 3300012989 | Soil | MTKSSARKAAAEKARSTYRKTTRKVGTEKAHGSDRKTASRAVAEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTWELYVHSLEAVLES |
| Ga0164305_113802462 | 3300012989 | Soil | MTKSSVRKTAAEKARIKYGKTTRKVGTGKAHGSDHKTGSKVAAEKARATYRRTAALEEFARDAQMPESV |
| Ga0157380_108223651 | 3300014326 | Switchgrass Rhizosphere | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARSSARKTASKTVAESARDNYRKTGARFEQFAYDVQMPESMRTLAEMSVAQTRELYVHSLEAALESWERFVVAAGQGTLALNR |
| Ga0173483_107496631 | 3300015077 | Soil | MTKSSAHKAAAEKTRGTYRKNARKVGAGKAHSKNRKAAPKAVAERARGTYRKTAAPFEGFAYDAQMPESMRALAEKS |
| Ga0132258_139428803 | 3300015371 | Arabidopsis Rhizosphere | MTKSSARKAPAEKARGTYRKTTRKVGAKKAHRTNRRAASKTVAEKARATYRKTAAQFEEFARDAQMPESMRA |
| Ga0132256_1012573021 | 3300015372 | Arabidopsis Rhizosphere | MTKSSARKAPAEKARGTYRKTTRKVGAKKAHSTNRRAASKTV |
| Ga0132257_1008720932 | 3300015373 | Arabidopsis Rhizosphere | MTKSSVRKAAPRDTHRKTTRKVGARKAHSGDRKTTSKVATEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTRELYVHSLEAVLEGWERFV |
| Ga0132255_1004866231 | 3300015374 | Arabidopsis Rhizosphere | MTKSSARKAPAEKARGTYRKTTRKVGAKKAHRTNRRAASKTVAEKARATYRKTAAQFEEFARDAQMPESMRALAEKSVSQTRELYVHSLEAVLESWEGFVV |
| Ga0132255_1029607301 | 3300015374 | Arabidopsis Rhizosphere | MTKSSLRKAAPRNTHRKTTRKVGARKAHSGDRKTTSKVATEKARGTYRKTAA |
| Ga0132255_1035461112 | 3300015374 | Arabidopsis Rhizosphere | MTKSSARKAPAEKARGTYRKTTRKVGAKKAHSTNRRAASKTVAEKARATYRKTAAQLEEFARDAQMPESMRALAEKSVSQTRELYVHSLEAVLESWEGFVV |
| Ga0187818_105061771 | 3300017823 | Freshwater Sediment | MTKSSAPKAPAGKARGTYRKTARQVGGGKAHRTDRKTAPKAVAEKAGGTYRKTAAQFEE |
| Ga0187801_102572391 | 3300017933 | Freshwater Sediment | MTKSSVRKAAAKKARGTDRKTARKVGAGKAPSTDRKTAKAVAEKARGTYRKTAAQFEDFARD |
| Ga0187765_109585672 | 3300018060 | Tropical Peatland | MTKSSAPKAPAGKARGTYRKTARQVGGGKAHRADRKTAPKALAEKAGGTNRKTAAQFE |
| Ga0184612_105926552 | 3300018078 | Groundwater Sediment | MTKSSVRKAAAEKARSTYRKTTRKVGAGKAHSSGRKTASKAVAEKARGTYRKTAARFEEFAYDAKMPESMRALA |
| Ga0210399_110051521 | 3300020581 | Soil | MTKSSVRKAAAEKAPATDRKTARKVRAGKARGKVRKTAPKAVAENARGTYRETAAKFEEFTRHAQMP |
| Ga0210399_111330581 | 3300020581 | Soil | MTKSSARKAAAEKARSTYRKTARKVGARKAHAGDRKTVSKAVAEGARDTYRKTAARFEEFAYDAQMPESMRALAETSVAQTRELYVHSLEAVLESWERFVVA |
| Ga0210402_103284561 | 3300021478 | Soil | MTNSSARKAAAEKARSTYRKTARKVGARKAHAGDRKTVSKAVAEGARDTYRKTAARFEEFAYDAQMPESMRALAETSVAQTRELY |
| Ga0222625_15752321 | 3300022195 | Groundwater Sediment | MTKSSVRKAAAEKARSTYRKTTRKVGAGKAHSSGRKTASKAVAEKARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTRELYVHSFEAVLESWE |
| Ga0207643_108551691 | 3300025908 | Miscanthus Rhizosphere | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARSSARKTASKTLAESARDNYRKTGARFEQFAYD |
| Ga0207663_106904032 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | MTKSSVRKAAAEKAPATDRKTARKVRAGKARGKVRKTAPKAVAEKARGTYRETAAKFEEFTRHAQMPESISALAEKSVAQTRELYEHSLEAVLENWERFVDAAGQ |
| Ga0207663_115669922 | 3300025916 | Corn, Switchgrass And Miscanthus Rhizosphere | MTKSSARKAAAEKARSTYRKTARKVGARKAHAGDRKTVSKAVAEGARDTYRKTAA |
| Ga0210068_10649111 | 3300025953 | Natural And Restored Wetlands | MTKSSARKAPAAKARGTNRKTARKVGAERAHSPNRKATSKAVAEKARATYR |
| Ga0207658_117022661 | 3300025986 | Switchgrass Rhizosphere | MTKSSARKAAAKKARSTYRKTTRKVGAAKTLNSGRKTASKAVAETALGTYRKTAARFEEFAYDAQMPESMRALA |
| Ga0209998_102171161 | 3300027717 | Arabidopsis Thaliana Rhizosphere | MTKSSVRKAAAKKARSTYRKTTRKVGVGKVHSGDRKTASKVAAEKARGTYRKTAARFEGFAYDAQMPESMRALA |
| Ga0209069_106840061 | 3300027915 | Watersheds | MRRFSPNDKACELKATRKVGTGKAYGSDRKTASKVVAESARGTYRKTAARFEEFAQMPESMRALAEKSVAQTREFYVHSLEAVLESWERFVVAAGQGAVA |
| Ga0209069_108372301 | 3300027915 | Watersheds | MTKSSVRKAAAEKAPATDRKTARKVRAGKARGKVRKTAPKAVAEKARGTYRETAAKFEEFTRHAQMPESI |
| Ga0268266_112184931 | 3300028379 | Switchgrass Rhizosphere | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARSSARKTASKTLAESARDNYRKTGARFEQFAYDAQMPESMRALAENSIAQVRELYAYSLEAALENWERFTLAAGQGTVALNRRAIDIARRNINNGIGL |
| Ga0247818_107954341 | 3300028589 | Soil | MTKSSARKAAAQKARSTYRKTARKVGATKAHSGDRKTASKVAKEKVRGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTREFYVHSLEAV |
| Ga0247820_106980742 | 3300028597 | Soil | MTKSSVRKTAAEKARSKYRKTTRKVGTRKGHGSDRK |
| Ga0307503_105506761 | 3300028802 | Soil | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARGGDRKTASKTVAESARDNYRKT |
| Ga0170824_1261891771 | 3300031231 | Forest Soil | MTKSSARKAAAEKARSTYRKTARKVGARKAHAGDRKTVSKAVAEGAHGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTRELYVHSLEAVLESWERFVVAAG |
| Ga0170818_1151552311 | 3300031474 | Forest Soil | MTKSSARKAAAEKARSTYRKTTRKVGARKAHAGDRKTASKAVAEKARGTYRKTAARFE |
| Ga0307468_1021154171 | 3300031740 | Hardwood Forest Soil | MTKSSVRKAAAEKARSTYRKTTRKVGAGKAHSSGRKTASKAVAEKARGTYRKTAARFEE |
| Ga0310892_107489181 | 3300031858 | Soil | MTKSSARKAAAKKARSTYRKTTRKVGAAKALNSGRKTASKAVAETALGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTREFYVHS |
| Ga0310884_107194621 | 3300031944 | Soil | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARSSARKTASKTLVESARDSYRKTGARFEQFAYDAQMPESMRALAENSIAQVRELYAD |
| Ga0310913_103622681 | 3300031945 | Soil | MTKSLVRKAVAEKASATRRKRVRKVGAGKAHTTNRKSQAIAERARGNYRKTAAQFEEFTYDAQMPGSVRALAERGVAQT |
| Ga0310897_104914441 | 3300032003 | Soil | MTKSSARKAAAKKARSTYRKTTRKVGAAKTLNSGRKTASKAVAETALGTYRKTAARFEEFAYDAQMPESMRALAEK |
| Ga0310906_108768391 | 3300032013 | Soil | MTKSSARKAVAEKAGSTYRKTTRSVGTGKAHSSDRKIASKAVAESARGTYSKSAVRFEEFAYDAQ |
| Ga0318514_103756242 | 3300032066 | Soil | MTKSSAPKVAAKNARGTNHKTARKVEKAHSAYRKTAPKAAAEKASGTYRKTAAQF |
| Ga0306924_111980901 | 3300032076 | Soil | MTKSSAPKVAAKNARGTDHKTARKVEKAHSAYRKTAPKAAAEKASGTYRKTAAQFENFTRGARMPEAVHALAEKSVAQTRELYEHSLEAALESWERFVDVAGQGAIALN |
| Ga0310895_107116781 | 3300032122 | Soil | MTKSSVRKAAAEKTGNKYRKTTRKVGTGKARSSARKTASKTLAESARDNYRKTGARF |
| Ga0307471_1037897932 | 3300032180 | Hardwood Forest Soil | MTKSSVRKAAAEKARSTYRKTTRKVGAGKAHSSGRKTASKAVAEKARGTYRKTAARFEEFAYDAKMPESMRALAEKSV |
| Ga0307471_1042568232 | 3300032180 | Hardwood Forest Soil | MTKSSIRNAAAEKAPGTYRKTTRRKTARKVGAGKAHKTDRKTASKIAAEK |
| Ga0247829_116915091 | 3300033550 | Soil | MTKSSVRKTAAEKARSKYRKTTRKVGTGKAHGSDRKTASRAVAERARGTYRKTAARFEEFAYDAQMPESMRALAEKSVAQTRELYVHSLEAVLESWERFVVAAGQGTLALNRKAIDI |
| Ga0247830_113362861 | 3300033551 | Soil | MTKSSVRKAAPRNTHRNTTRKIGARKAHSGDRKTTSKVATEKTRGTYRKTAARFE |
| Ga0370545_086558_471_662 | 3300034643 | Soil | MTKSSARKAAAKKARSTYRKTTRKVGAAKTLNSGRKTASKAVAETALGTYRKTAARFEEFAYDA |
| Ga0314781_124477_93_458 | 3300034660 | Soil | MTKSSARKAVAEKARSTYRKTTRSVGAGKAHSSDRKIASKAVAESPRGTYRKSAVRFEEFAYDAQMPESMRALAEKSVSQARELYVLSLEAVIEIWESFVVAAGQGTVALNGYRHHSPQY |
| Ga0314788_100306_1_162 | 3300034666 | Soil | MTKSSARKAAAKKARSTYRKTTRKVGAAKALNSGRKTASKAVAETALGTYRKTA |
| Ga0370541_028833_472_660 | 3300034680 | Soil | MTKSSARKAAAKKARSTYRKTTRKVGAGKAHSSGRKTASKTVAEKARGTYPKTAARFEEFAYD |
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