Metagenome / Metatranscriptome Family F097769

Basic Information
Family ID	F097769
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	40 residues
Representative Sequence	ASFMTGIGLLAYPIAWIVMPEEPLLLTAPAGAQRVTNQ
Number of Associated Samples	94
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Most Common Taxonomy
Group	Bacteria (99.038 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (11.539 % of family members)
Environment Ontology (ENVO)	Unclassified (19.231 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.115 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.82% β-sheet: 0.00% Coil/Unstructured: 68.18%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00561	Abhydrolase_1	63.46
PF12697	Abhydrolase_6	4.81
PF12681	Glyoxalase_2	3.85
PF00275	EPSP_synthase	2.88
PF07394	DUF1501	1.92
PF01471	PG_binding_1	1.92
PF00180	Iso_dh	1.92
PF11950	DUF3467	0.96
PF13432	TPR_16	0.96
PF00483	NTP_transferase	0.96
PF13248	zf-ribbon_3	0.96
PF00571	CBS	0.96
PF00903	Glyoxalase	0.96
PF00899	ThiF	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	87.50 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.92 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.42 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.92 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.85 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.92 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.62 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.92 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.92 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.85 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.92 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.92 %
Unclassified	root	N/A	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_107558363	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300001131\|JGI12631J13338_1031198	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300001356\|JGI12269J14319_10204383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	773	Open in IMG/M
3300002245\|JGIcombinedJ26739_100484304	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300002568\|C688J35102_120178779	All Organisms → cellular organisms → Bacteria → Acidobacteria	914	Open in IMG/M
3300004092\|Ga0062389_101102252	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	979	Open in IMG/M
3300005176\|Ga0066679_10368575	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	940	Open in IMG/M
3300005434\|Ga0070709_10038265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2936	Open in IMG/M
3300005435\|Ga0070714_100234476	All Organisms → cellular organisms → Bacteria	1692	Open in IMG/M
3300005435\|Ga0070714_101803060	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300006052\|Ga0075029_100013344	All Organisms → cellular organisms → Bacteria	4547	Open in IMG/M
3300006175\|Ga0070712_101448921	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300006893\|Ga0073928_11166120	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300007076\|Ga0075435_100031589	All Organisms → cellular organisms → Bacteria	4173	Open in IMG/M
3300007265\|Ga0099794_10691369	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300009038\|Ga0099829_11735300	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300009519\|Ga0116108_1190631	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	603	Open in IMG/M
3300009520\|Ga0116214_1125984	All Organisms → cellular organisms → Bacteria → Acidobacteria	948	Open in IMG/M
3300009520\|Ga0116214_1128357	All Organisms → cellular organisms → Bacteria → Acidobacteria	939	Open in IMG/M
3300009524\|Ga0116225_1408915	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300009638\|Ga0116113_1105176	All Organisms → cellular organisms → Bacteria → Acidobacteria	683	Open in IMG/M
3300009645\|Ga0116106_1130067	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300009709\|Ga0116227_11156497	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300009762\|Ga0116130_1067851	All Organisms → cellular organisms → Bacteria → Acidobacteria	1121	Open in IMG/M
3300010049\|Ga0123356_10042108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4255	Open in IMG/M
3300010373\|Ga0134128_12447556	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300010379\|Ga0136449_100829455	All Organisms → cellular organisms → Bacteria → Acidobacteria	1522	Open in IMG/M
3300010379\|Ga0136449_104220537	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300011120\|Ga0150983_13527078	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300011269\|Ga0137392_10579386	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300011271\|Ga0137393_10047971	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3330	Open in IMG/M
3300012212\|Ga0150985_120145221	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300012363\|Ga0137390_11030037	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300012927\|Ga0137416_10495281	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M
3300014201\|Ga0181537_10415989	All Organisms → cellular organisms → Bacteria → Acidobacteria	922	Open in IMG/M
3300014489\|Ga0182018_10118721	All Organisms → cellular organisms → Bacteria → Acidobacteria	1534	Open in IMG/M
3300014655\|Ga0181516_10209843	All Organisms → cellular organisms → Bacteria → Acidobacteria	988	Open in IMG/M
3300015265\|Ga0182005_1196411	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300017943\|Ga0187819_10011328	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5056	Open in IMG/M
3300017999\|Ga0187767_10319787	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300018008\|Ga0187888_1388817	All Organisms → cellular organisms → Bacteria → Acidobacteria	527	Open in IMG/M
3300018020\|Ga0187861_10218286	All Organisms → cellular organisms → Bacteria	844	Open in IMG/M
3300018033\|Ga0187867_10065679	All Organisms → cellular organisms → Bacteria → Acidobacteria	2150	Open in IMG/M
3300018040\|Ga0187862_10725349	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300018433\|Ga0066667_11701451	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300018468\|Ga0066662_12493322	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300018482\|Ga0066669_10273441	All Organisms → cellular organisms → Bacteria → Acidobacteria	1352	Open in IMG/M
3300020583\|Ga0210401_11104101	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300020583\|Ga0210401_11643911	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300021180\|Ga0210396_10890130	All Organisms → cellular organisms → Bacteria → Acidobacteria	759	Open in IMG/M
3300021181\|Ga0210388_11728924	All Organisms → cellular organisms → Bacteria → Acidobacteria	517	Open in IMG/M
3300021401\|Ga0210393_11154976	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300021406\|Ga0210386_10388166	All Organisms → cellular organisms → Bacteria → Acidobacteria	1203	Open in IMG/M
3300021407\|Ga0210383_10325857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1322	Open in IMG/M
3300021478\|Ga0210402_10470799	All Organisms → cellular organisms → Bacteria → Acidobacteria	1167	Open in IMG/M
3300021478\|Ga0210402_10700058	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300021478\|Ga0210402_10924053	All Organisms → cellular organisms → Bacteria → Acidobacteria	799	Open in IMG/M
3300021560\|Ga0126371_12901780	Not Available	581	Open in IMG/M
3300024271\|Ga0224564_1030958	All Organisms → cellular organisms → Bacteria → Acidobacteria	1004	Open in IMG/M
3300025434\|Ga0208690_1033691	All Organisms → cellular organisms → Bacteria → Acidobacteria	827	Open in IMG/M
3300025905\|Ga0207685_10311268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	782	Open in IMG/M
3300025906\|Ga0207699_10590860	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300025929\|Ga0207664_10951793	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300025934\|Ga0207686_10881561	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300026301\|Ga0209238_1054362	All Organisms → cellular organisms → Bacteria → Acidobacteria	1431	Open in IMG/M
3300026328\|Ga0209802_1277234	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300026467\|Ga0257154_1018065	All Organisms → cellular organisms → Bacteria → Acidobacteria	1011	Open in IMG/M
3300026529\|Ga0209806_1289576	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300027497\|Ga0208199_1109393	All Organisms → cellular organisms → Bacteria → Acidobacteria	568	Open in IMG/M
3300027629\|Ga0209422_1134206	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300027853\|Ga0209274_10394080	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300027853\|Ga0209274_10568807	All Organisms → cellular organisms → Bacteria → Acidobacteria	587	Open in IMG/M
3300027869\|Ga0209579_10230557	All Organisms → cellular organisms → Bacteria → Acidobacteria	994	Open in IMG/M
3300027879\|Ga0209169_10221385	All Organisms → cellular organisms → Bacteria → Acidobacteria	990	Open in IMG/M
3300027889\|Ga0209380_10214754	All Organisms → cellular organisms → Bacteria → Acidobacteria	1130	Open in IMG/M
3300027905\|Ga0209415_10129779	All Organisms → cellular organisms → Bacteria → Acidobacteria	2621	Open in IMG/M
3300029915\|Ga0311358_10718389	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300029954\|Ga0311331_10659646	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300029999\|Ga0311339_11259237	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300030000\|Ga0311337_10983790	All Organisms → cellular organisms → Bacteria → Acidobacteria	735	Open in IMG/M
3300030509\|Ga0302183_10197043	All Organisms → cellular organisms → Bacteria → Acidobacteria	786	Open in IMG/M
3300030618\|Ga0311354_11364063	All Organisms → cellular organisms → Bacteria → Acidobacteria	633	Open in IMG/M
3300030706\|Ga0310039_10179585	All Organisms → cellular organisms → Bacteria → Acidobacteria	843	Open in IMG/M
3300030737\|Ga0302310_10581430	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300030878\|Ga0265770_1046988	All Organisms → cellular organisms → Bacteria → Acidobacteria	771	Open in IMG/M
3300031057\|Ga0170834_108774322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2288	Open in IMG/M
3300031122\|Ga0170822_12898699	All Organisms → cellular organisms → Bacteria → Acidobacteria	667	Open in IMG/M
3300031234\|Ga0302325_11922531	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	734	Open in IMG/M
3300031524\|Ga0302320_10823339	All Organisms → cellular organisms → Bacteria → Acidobacteria	1022	Open in IMG/M
3300031711\|Ga0265314_10284401	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300031754\|Ga0307475_11181475	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300031754\|Ga0307475_11472629	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300031770\|Ga0318521_10327696	All Organisms → cellular organisms → Bacteria → Acidobacteria	905	Open in IMG/M
3300031962\|Ga0307479_10291956	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1611	Open in IMG/M
3300031962\|Ga0307479_11740991	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300032076\|Ga0306924_11664932	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300032770\|Ga0335085_10340683	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1761	Open in IMG/M
3300032783\|Ga0335079_10102616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3241	Open in IMG/M
3300032805\|Ga0335078_11497209	All Organisms → cellular organisms → Bacteria → Acidobacteria	755	Open in IMG/M
3300032892\|Ga0335081_10191675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2844	Open in IMG/M
3300032895\|Ga0335074_10427653	All Organisms → cellular organisms → Bacteria → Acidobacteria	1418	Open in IMG/M
3300033134\|Ga0335073_10298898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1933	Open in IMG/M
3300033134\|Ga0335073_10595506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300033545\|Ga0316214_1000742	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3505	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.31%
Host-Associated	Host-Associated	7.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.88%
Aquatic	Environmental → Aquatic	14.42%
Plants	Host-Associated → Plants	6.73%
Arthropoda	Host-Associated → Arthropoda	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.23%
Freshwater	Environmental → Aquatic → Freshwater	12.50%
Peat	Environmental → Terrestrial → Peat	8.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Sediment	Environmental → Aquatic → Sediment	0.96%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Roots	Host-Associated → Plants → Roots	0.96%
Peat Moss	Host-Associated → Plants → Peat Moss	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.19%
Loam	Environmental → Terrestrial → Soil → Loam	15.38%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.96%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.27%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.88%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.73%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.77%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.88%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.96%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.96%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.96%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009709	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026467	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-A	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030878	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1075583632	3300000955	Soil	MAFMTVIGFLSYPIAWIVMPEEPLALPAPMGAEPVQNS*
JGI12631J13338_10311983	3300001131	Forest Soil	SFMTVIGFISYPIAWVVMPEEPLLLAPPVGAQRVPTS*
JGI12269J14319_102043831	3300001356	Peatlands Soil	WLIVGVMTGVGLLSYPIAWIVMPEEPLMLSAPAGQPVTHS*
JGIcombinedJ26739_1004843043	3300002245	Forest Soil	TVIGFLSYPIAWIIMPEEPLLLPAPPIGAQQATNP*
C688J35102_1201787791	3300002568	Soil	RLVGLIASVVTGVGLLSYPIAWIVMPEEPYKLPANVTTGQVVTNS*
Ga0062389_1011022523	3300004092	Bog Forest Soil	WLLGSFMTGIGLLAYPIAWIVMPEEPLLLAAPVGAQHVAQHVANP*
Ga0066679_103685751	3300005176	Soil	VWLIACFMTGIGFLSYPIAWIVMPEEPLLLAAPLATQRVTNS*
Ga0070709_100382651	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LVAFMTGIGFLSYPIAWIVMPEEPLLLPAPSGIHPATDAGS*
Ga0070714_1002344763	3300005435	Agricultural Soil	VVWLMVAFMTVIGFLSYPIAWIIMPEEPPLLPVPAGTPQATHS*
Ga0070714_1018030601	3300005435	Agricultural Soil	WLIVAFMTVIGFLSYPIAWIIMPEEPPLLPVPAGTPQATHS*
Ga0075029_1000133441	3300006052	Watersheds	LVRVLWLITALMTGIGLLSYPIAWIAMPEEPLRLAAPVAVQHVSNS*
Ga0070712_1014489211	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VRVVWLMVAFMTVIGFLSYPIAWIIMPEEPPLLPVPAGTPQATHS*
Ga0073928_111661201	3300006893	Iron-Sulfur Acid Spring	MTGIGVISYPIAWIVMPEEPLLLMAPAGAERVTNS*
Ga0075435_1000315891	3300007076	Populus Rhizosphere	WLLVGVMTGVGLLSYPIAWIVMPEEPEVAPQPAGQQVTS*
Ga0099794_106913692	3300007265	Vadose Zone Soil	WLVTVIMSGVGLIPYIIGWIVMPDEPLLLTAPAGAERVANP*
Ga0099829_117353003	3300009038	Vadose Zone Soil	RLVWLITSVVTGIGLLSYPIAWIVMPEEPYMLAAQAQAGQQVTSPQA*
Ga0116108_11906311	3300009519	Peatland	IASFMTGIGLISYPIAWIVMPEEPLLLTAPASAQPHVTHS*
Ga0116214_11259842	3300009520	Peatlands Soil	WLFVAIMTGVGFLAYPIAWIVMPEEPLRLAAPAADPQVINP*
Ga0116214_11283571	3300009520	Peatlands Soil	TGVGVLAYPIAWIVMPDEPLRLPAPAGAQQVINP*
Ga0116225_14089152	3300009524	Peatlands Soil	FLTGVGLLAYPIAWIVIPEEPLPVSAPMGQRVTNP*
Ga0116113_11051761	3300009638	Peatland	MTGIGLLAYPIAWIVMPEEPLLLTAPAGAQRVTNQ*
Ga0116106_11300672	3300009645	Peatland	LIASFMTGIGLMSYPIAWIVMPEEPMLLTAPAGAQRVTNP*
Ga0116227_111564972	3300009709	Host-Associated	SFMTGIGLLAYPIAWIVVPEEPLMLTASVPSGQQVPAS*
Ga0116130_10678513	3300009762	Peatland	RVVWLIASFMTGIGLISYPIAWIVMPEEPLLLTAPASAQPHVTHS*
Ga0123356_100421081	3300010049	Termite Gut	GVGLLSYPIAWILMPEEPYLLSTAERASQQATNP*
Ga0134128_124475562	3300010373	Terrestrial Soil	WLLVGVMTGVGLLSYPIAWVVMPEEPLRLEAPAGQQAAVL*
Ga0136449_1008294552	3300010379	Peatlands Soil	MTGVGLLAYPIAWIVMPEEPLLLTAPVGAQRATNP*
Ga0136449_1042205372	3300010379	Peatlands Soil	VALMTGVGLLAYPIAWIVMPEEPLRFAPPAGAQQAINL*
Ga0150983_135270781	3300011120	Forest Soil	LVWLLASCLTGVGLLAYPIAWIVMPEEPLLLTAPAGAQRAANP*
Ga0137392_105793862	3300011269	Vadose Zone Soil	LITAIMSGIGVIPYIIAWIVMPEEPLMLTAPAGAPRVTNP*
Ga0137393_100479715	3300011271	Vadose Zone Soil	VSVMTGIGLLSYPIAWIVMPEEPLMLSAPVGAQRVTNS*
Ga0150985_1201452212	3300012212	Avena Fatua Rhizosphere	LLVGIMTGIGLLSYPIAWIVIPEEPLMLSAPAGYPVTGQ*
Ga0137390_110300372	3300012363	Vadose Zone Soil	ACFMTGIGFLSYPIAWIVMPEEPLLLAAPLAAQRVPTP*
Ga0137416_104952812	3300012927	Vadose Zone Soil	RLVWLVVSVMTGIGLLSYPIAWIVMPEEPLMLSAPVGAQRVTNS*
Ga0181537_104159892	3300014201	Bog	VIGFLSYPIAWIIMPEEPLLLPAPPIGAQQVTNP*
Ga0182018_101187211	3300014489	Palsa	WLITSFMTGIGLISYPIAWIVMPDEPLLLLTEPAGAQPVTNP*
Ga0181516_102098432	3300014655	Bog	WLLGSFMTGIGLLAYPIAWIVMPEEPLLLTAPAGAQRAMNP*
Ga0182005_11964112	3300015265	Rhizosphere	RVVWLIVAFMTGIGFLSYPIAWIIMPEEPPLLPVPAGTPQATHS*
Ga0187819_100113286	3300017943	Freshwater Sediment	SLMTGVGLLAYPIAWIVMPEEPLRLAAPAGAQPMINS
Ga0187767_103197872	3300017999	Tropical Peatland	LVWLIVALMTGIGLLAYPIAWIVMPEEPMLIAAPPAAQSVTNP
Ga0187888_13888172	3300018008	Peatland	IASFMTGIGLISYPIAWIVMPEEPLLLTAPVGAQRMTNP
Ga0187861_102182863	3300018020	Peatland	VWLIASFMTGIGLISYPIAWIVMPEEPLLLTTPASAQPHVTHS
Ga0187867_100656791	3300018033	Peatland	LMTGVGLLAYPIAWIVMPEEPLRLPAPVGAQPVINP
Ga0187862_107253492	3300018040	Peatland	LVWLIASFMTGIGLISYPIAWIIMPEEPLRLAAPVGVQRVTNP
Ga0066667_117014512	3300018433	Grasslands Soil	LVTVIMSGIGLIPYIIGWIVMPEEPLLLTAPAGAQGVTNP
Ga0066662_124933222	3300018468	Grasslands Soil	CMTVIGFLSYPIAWIIMPEEPLMLREPAGAERVPNP
Ga0066669_102734411	3300018482	Grasslands Soil	VAFMTVIGFLSYPIAWIIMPEEPPLLPVPAGTPQATHS
Ga0210401_111041012	3300020583	Soil	FVSLMTGVGLLAYPVAWIVMPDEPLRLPAPAGVQQVINP
Ga0210401_116439111	3300020583	Soil	LFVAVMTGVGLLAYPIAWIIMPEEPLRLPAPAGAEQVISP
Ga0210396_108901302	3300021180	Soil	WFFTAFLTGVGLIAYPIAWIVMPEEPLRLSAPMGQQATST
Ga0210388_117289242	3300021181	Soil	AIMTGVGFLAYPIAWIVMPEEPLRLAAPSADAQVISP
Ga0210393_111549761	3300021401	Soil	FLTGVGLLAYPIAWIVMPEEPLRVSAPMAQQATSS
Ga0210386_103881663	3300021406	Soil	VVWLIVACMTVIGFLSYPIAWIIMPEEPLLLPAPPIGAQQATNP
Ga0210383_103258571	3300021407	Soil	WLFIVLVGGTGLLAYVIAWMVMPEEPLRLPAPVGAQPVINP
Ga0210402_104707993	3300021478	Soil	ALMTGVGLLAYPIAWIVMPEEPLRLAAPAGAPQLINP
Ga0210402_107000581	3300021478	Soil	CLIVAVMTGVGLLSYPIAWVVMPEEPLRLEAPAGHQAAVL
Ga0210402_109240531	3300021478	Soil	ITAIMTGFGFVAYLIAWIVMPEEPLLLAAPSAAQPATNP
Ga0126371_129017802	3300021560	Tropical Forest Soil	VVWLIVACMTVIGFLSYPIAWVIMPEEPLMLEAPRTGQPAQDTRS
Ga0224564_10309581	3300024271	Soil	WLITAFMTGFGFLAYIIAWIIMPEEPLLLPAPVAARPATNP
Ga0208690_10336912	3300025434	Peatland	VWLFVALMTGVGLLAYPIAWIVMPEEPLRLPAPVGAQPVINP
Ga0207685_103112681	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	AFMTGVGFLSYLIAWIIMPEEPLLLPAPQLGAQQATSR
Ga0207699_105908603	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	ASVVTGIGLLSYPIAWVVIPEEPYKLPANVTSGQVVTNS
Ga0207664_109517932	3300025929	Agricultural Soil	WLIVAFMTVIGFLSYPIAWIIMPEEPPLLPVPAGTPQATHS
Ga0207686_108815613	3300025934	Miscanthus Rhizosphere	LVGIMTGIGLLSYPIAWIVIPEEPLMLSAPAGYPVTGQ
Ga0209238_10543622	3300026301	Grasslands Soil	WLMVAFMTVIGFLSYPIAWIIMPEEPPLLPVPAGTPQATHS
Ga0209802_12772341	3300026328	Soil	VWLVTVIMSGIGLIPYIIGWIVMPEEPLLLTAPAGAQGVTNP
Ga0257154_10180652	3300026467	Soil	ASFMTGIGVISYPIAWIVMPEEPLLLMVPGGAQRVTNS
Ga0209806_12895762	3300026529	Soil	LLWLIVAVMTGVGLLAYPIAWIVMPDQPEIRSLPAGQQLTTP
Ga0208199_11093932	3300027497	Peatlands Soil	WLFVAIMTGVGFLAYPIAWIVMPEEPLRLAAPAADPQVINP
Ga0209422_11342062	3300027629	Forest Soil	AWLIGSFMTGIGLFAYPIAWIVMPEEPLLLAEPAGAQRVTNP
Ga0209274_103940802	3300027853	Soil	LITSFMTGIGLISYPIAWIVMPEEPLLLPEPAGAQPVTNP
Ga0209274_105688072	3300027853	Soil	LITSLMTGIGLLAYPIAWIVMPEEPLLLAAPVGAQRATNP
Ga0209579_102305572	3300027869	Surface Soil	SLVFDGIGLLSYPIAWIVMPEEPLLLSAPVTARHAANM
Ga0209169_102213851	3300027879	Soil	LAWLFVALMTGVGLFAYPIAWIVMPEEPLRLPAPVGAQQVMNI
Ga0209380_102147542	3300027889	Soil	VRLMWLLVAFMTGVGLIAYPIAWIVMPDEPLLLAAPVGAQRVANQ
Ga0209415_101297795	3300027905	Peatlands Soil	LITAFMTGFGFLAYLIAWIVMPEEPLLLPAPVAAQQVTNP
Ga0311358_107183891	3300029915	Bog	ASFMTGIGLIAYPIAWIVMPEEPLLLAAPVGAQQVPNP
Ga0311331_106596462	3300029954	Bog	SFMTGIGLLAYPIAWIVIPEEPLMLTASVPSGQQVPTS
Ga0311339_112592371	3300029999	Palsa	CLPPMTCIGLLAYPIAWIIMPEEPLLLSPPVGAGQMTNP
Ga0311337_109837902	3300030000	Fen	SIMTGVGLIAYPIAWIVMPEEPYMLSAPAGYQVPNP
Ga0302183_101970431	3300030509	Palsa	MTGIGLISYPIAWIVMPDEPLLLPEPAGAQRVTNP
Ga0311354_113640632	3300030618	Palsa	VWLITSFMTGIGLISYPVAWVVMPDEPLLLPEPAGAQRVTNP
Ga0310039_101795852	3300030706	Peatlands Soil	VWLIASFMTGIGLISYPIAWIVMPEEPLMLAAPAGVQRVTNP
Ga0302310_105814301	3300030737	Palsa	RLVWLITSFMTGIGLISYPIAWIVMPEEPLLLAVPVGAQQVTNA
Ga0265770_10469882	3300030878	Soil	LVWLLASCLTGIGLLAYPIAWIVMPEEPLPLTVPVGAQRAANP
Ga0170834_1087743222	3300031057	Forest Soil	VWLIVAFMTGVGFLSYLIAWIIMPEEPLLLPAPQLGAQQATSR
Ga0170822_128986992	3300031122	Forest Soil	VWLIVAFMTGVGFLSYLIAWIVMPEEPLLLPAPQLGAQQATSR
Ga0302325_119225311	3300031234	Palsa	PMTCIGLLAYPIAWIIMPEEPLLLSPPVGAGQMTNP
Ga0302320_108233391	3300031524	Bog	ASFMTGIGLLAYPIAWIVMPEEPLLLTAPAGAQRVTNQ
Ga0265314_102844012	3300031711	Rhizosphere	WLITLFMSGFGLIPYIIAWIIMPEEPRLLSAPVNAQQVPNA
Ga0307475_111814751	3300031754	Hardwood Forest Soil	WLITSFMTGIGLISYPIAWIVMPEEPLLLAAPADAQRATNP
Ga0307475_114726292	3300031754	Hardwood Forest Soil	ASFMTGIGVISYPIAWIVMPEEPLLLMAPAGAQRATNP
Ga0318521_103276961	3300031770	Soil	MTGIGFFSYPIAWIIMPEEPLMLQAPSGALPVSDTHS
Ga0307479_102919561	3300031962	Hardwood Forest Soil	FMTGVGFLSYLIAWIIMPEEPLLLPAPQLGAQQATNL
Ga0307479_117409911	3300031962	Hardwood Forest Soil	MSGIGLIPYIIAWIVMPEEPLLLTAPVGAQRATNP
Ga0306924_116649321	3300032076	Soil	IMACMTGIGFFSYPIAWIIMPEEPLMLQAPSGALPVSDTHS
Ga0335085_103406833	3300032770	Soil	TAFLTGVGLLAYPIAWIVIPEEPLPVSAPLGQRVPSN
Ga0335079_101026161	3300032783	Soil	LLVAVMTGIGIFSYPIAWIVIPEEPLFLQAPVAQQQATHS
Ga0335078_114972091	3300032805	Soil	SCMTVIGFLSYPIAWIIMPEEPLMLPSPAAGAKQATSP
Ga0335081_101916751	3300032892	Soil	MVRVVWLIMAFMTVIGFLSYPIAWIVMPEEPMLVPAPTGAQPATNTRS
Ga0335074_104276533	3300032895	Soil	ASFTTIIGMLSYPIAWIVMPEEPLLLRDGAPAGKPATNS
Ga0335073_102988981	3300033134	Soil	VVWLIASVTTVIGMISYPIAWIVMPEEPLMLSAPANAQRATNP
Ga0335073_105955063	3300033134	Soil	VRVVWLIMAFMTVIGFLSYPIAWIIMPEEPLLLPAPIGAQPAQNA
Ga0316214_10007428	3300033545	Roots	LVWLITAIMTCIGFLPYVIAWIVMPEEPYLLPAPMNAQPVNSQPMNVQP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097769

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign