Metagenome / Metatranscriptome Family F097751

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097751
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	96 residues
Representative Sequence	MRSFLAMLFYIDHKCDTQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVLGVCPAPVVRADTAPQPKPIPRLPKHRKSNAPSPVQVPTEPSVQVAVQP
Number of Associated Samples	82
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.20 %
% of genes near scaffold ends (potentially truncated)	19.23 %
% of genes from short scaffolds (< 2000 bps)	39.42 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.192 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (33.654 % of family members)
Environment Ontology (ENVO)	Unclassified (32.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.23% β-sheet: 0.00% Coil/Unstructured: 71.77%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF11657	Activator-TraM	25.00
PF16793	RepB_primase	13.46
PF01656	CbiA	7.69
PF11843	DUF3363	3.85
PF04956	TrbC	2.88
PF09903	DUF2130	1.92
PF09369	MZB	1.92
PF00589	Phage_integrase	1.92
PF12833	HTH_18	0.96
PF12867	DinB_2	0.96
PF05569	Peptidase_M56	0.96
PF00069	Pkinase	0.96
PF01872	RibD_C	0.96
PF13175	AAA_15	0.96
PF00580	UvrD-helicase	0.96
PF14279	HNH_5	0.96
PF12846	AAA_10	0.96
PF03572	Peptidase_S41	0.96
PF13476	AAA_23	0.96
PF07646	Kelch_2	0.96
PF03524	CagX	0.96
PF08843	AbiEii	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.85
COG3838	Type IV secretory pathway, VirB2 component (pilin)	Intracellular trafficking, secretion, and vesicular transport [U]	2.88
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	0.96
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.96
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	0.96
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.96
COG2253	Predicted nucleotidyltransferase component of viral defense system	Defense mechanisms [V]	0.96
COG3055	N-acetylneuraminic acid mutarotase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG3504	Type IV secretory pathway, VirB9 components	Intracellular trafficking, secretion, and vesicular transport [U]	0.96
COG3973	DNA helicase IV	Replication, recombination and repair [L]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.19 %
Unclassified	root	N/A	4.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.19 %
Unclassified	root	N/A	4.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.19 %
Unclassified	root	N/A	4.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.69 %
Unclassified	root	N/A	4.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	50.00 %
Unclassified	root	N/A	4.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	50.00 %
Unclassified	root	N/A	4.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001137\|JGI12637J13337_1000129	All Organisms → cellular organisms → Bacteria	4343	Open in IMG/M
3300001593\|JGI12635J15846_10068577	All Organisms → cellular organisms → Bacteria	2631	Open in IMG/M
3300001661\|JGI12053J15887_10015644	All Organisms → cellular organisms → Bacteria	4214	Open in IMG/M
3300004092\|Ga0062389_100044524	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3478	Open in IMG/M
3300004631\|Ga0058899_11566635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300005167\|Ga0066672_10502722	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300005180\|Ga0066685_10190238	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300005450\|Ga0066682_10970286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300005536\|Ga0070697_100382883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1218	Open in IMG/M
3300005537\|Ga0070730_10001962	All Organisms → cellular organisms → Bacteria	19141	Open in IMG/M
3300005575\|Ga0066702_10009297	All Organisms → cellular organisms → Bacteria → Proteobacteria	4299	Open in IMG/M
3300005602\|Ga0070762_10047264	All Organisms → cellular organisms → Bacteria	2362	Open in IMG/M
3300006047\|Ga0075024_100592591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300006059\|Ga0075017_101366509	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300006176\|Ga0070765_100001566	All Organisms → cellular organisms → Bacteria	14124	Open in IMG/M
3300006893\|Ga0073928_10014887	All Organisms → cellular organisms → Bacteria	8534	Open in IMG/M
3300006893\|Ga0073928_10066268	All Organisms → cellular organisms → Bacteria	3157	Open in IMG/M
3300007258\|Ga0099793_10105230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1309	Open in IMG/M
3300007265\|Ga0099794_10008584	All Organisms → cellular organisms → Bacteria → Proteobacteria	4253	Open in IMG/M
3300009038\|Ga0099829_10931867	Not Available	721	Open in IMG/M
3300009038\|Ga0099829_11443012	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300009088\|Ga0099830_10387881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300010341\|Ga0074045_10646290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300010343\|Ga0074044_11106225	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300010379\|Ga0136449_100211235	All Organisms → cellular organisms → Bacteria	3670	Open in IMG/M
3300012198\|Ga0137364_10049540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2791	Open in IMG/M
3300012198\|Ga0137364_10060872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2550	Open in IMG/M
3300012199\|Ga0137383_10520419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	871	Open in IMG/M
3300012200\|Ga0137382_10097627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1933	Open in IMG/M
3300012202\|Ga0137363_11813032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M
3300012205\|Ga0137362_10563155	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	984	Open in IMG/M
3300012205\|Ga0137362_10743238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300012207\|Ga0137381_10113970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2303	Open in IMG/M
3300012357\|Ga0137384_10601299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300012361\|Ga0137360_10592546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300012363\|Ga0137390_10011088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7998	Open in IMG/M
3300012582\|Ga0137358_10154516	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1563	Open in IMG/M
3300012582\|Ga0137358_10361536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300012683\|Ga0137398_10261654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300012683\|Ga0137398_10310769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300012918\|Ga0137396_11071407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300012923\|Ga0137359_10277041	All Organisms → cellular organisms → Bacteria → Acidobacteria	1495	Open in IMG/M
3300012925\|Ga0137419_10047892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2739	Open in IMG/M
3300012925\|Ga0137419_10345416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300012927\|Ga0137416_10685743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300012944\|Ga0137410_10613921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300014153\|Ga0181527_1025671	All Organisms → cellular organisms → Bacteria	3640	Open in IMG/M
3300014156\|Ga0181518_10106679	Not Available	1556	Open in IMG/M
3300014158\|Ga0181521_10028112	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4383	Open in IMG/M
3300014165\|Ga0181523_10343164	Not Available	838	Open in IMG/M
3300015241\|Ga0137418_10007487	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10028	Open in IMG/M
3300015241\|Ga0137418_10027196	Not Available	5291	Open in IMG/M
3300015245\|Ga0137409_10008038	All Organisms → cellular organisms → Bacteria → Acidobacteria	10791	Open in IMG/M
3300015264\|Ga0137403_10029979	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5759	Open in IMG/M
3300017929\|Ga0187849_1092532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1297	Open in IMG/M
3300017943\|Ga0187819_10000008	All Organisms → cellular organisms → Bacteria	104096	Open in IMG/M
3300018433\|Ga0066667_11039954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300020579\|Ga0210407_10007490	All Organisms → cellular organisms → Bacteria → Acidobacteria	8233	Open in IMG/M
3300020579\|Ga0210407_10156095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1761	Open in IMG/M
3300020581\|Ga0210399_10018157	All Organisms → cellular organisms → Bacteria	5568	Open in IMG/M
3300020581\|Ga0210399_11507628	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300020583\|Ga0210401_10000097	All Organisms → cellular organisms → Bacteria	99098	Open in IMG/M
3300020583\|Ga0210401_10152724	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2158	Open in IMG/M
3300021046\|Ga0215015_10726001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300021086\|Ga0179596_10028820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2116	Open in IMG/M
3300021170\|Ga0210400_10028433	All Organisms → cellular organisms → Bacteria	4340	Open in IMG/M
3300021170\|Ga0210400_10054906	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3104	Open in IMG/M
3300021171\|Ga0210405_10016612	All Organisms → cellular organisms → Bacteria → Acidobacteria	6048	Open in IMG/M
3300021171\|Ga0210405_10025927	All Organisms → cellular organisms → Bacteria	4716	Open in IMG/M
3300021401\|Ga0210393_10017424	All Organisms → cellular organisms → Bacteria	5562	Open in IMG/M
3300021402\|Ga0210385_10155879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1637	Open in IMG/M
3300021420\|Ga0210394_10005782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	13713	Open in IMG/M
3300021420\|Ga0210394_10023912	All Organisms → cellular organisms → Bacteria	5588	Open in IMG/M
3300021420\|Ga0210394_10053978	All Organisms → cellular organisms → Bacteria → Acidobacteria	3506	Open in IMG/M
3300021420\|Ga0210394_10123978	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2237	Open in IMG/M
3300021432\|Ga0210384_10062676	All Organisms → cellular organisms → Bacteria	3358	Open in IMG/M
3300021433\|Ga0210391_10196081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1589	Open in IMG/M
3300021479\|Ga0210410_10000206	All Organisms → cellular organisms → Bacteria	83266	Open in IMG/M
3300021479\|Ga0210410_10078436	All Organisms → cellular organisms → Bacteria → Acidobacteria	2900	Open in IMG/M
3300021559\|Ga0210409_10007382	All Organisms → cellular organisms → Bacteria	11328	Open in IMG/M
3300021559\|Ga0210409_10056925	All Organisms → cellular organisms → Bacteria	3662	Open in IMG/M
3300022557\|Ga0212123_10025529	All Organisms → cellular organisms → Bacteria	6363	Open in IMG/M
3300022557\|Ga0212123_10096550	All Organisms → cellular organisms → Bacteria	2429	Open in IMG/M
3300025862\|Ga0209483_1012966	All Organisms → cellular organisms → Bacteria	4545	Open in IMG/M
3300026551\|Ga0209648_10030486	All Organisms → cellular organisms → Bacteria → Acidobacteria	4711	Open in IMG/M
3300026551\|Ga0209648_10172308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1685	Open in IMG/M
3300026552\|Ga0209577_10052037	All Organisms → cellular organisms → Bacteria	3453	Open in IMG/M
3300027583\|Ga0209527_1002293	All Organisms → cellular organisms → Bacteria	3838	Open in IMG/M
3300027660\|Ga0209736_1001456	All Organisms → cellular organisms → Bacteria	7826	Open in IMG/M
3300027671\|Ga0209588_1004279	All Organisms → cellular organisms → Bacteria → Proteobacteria	4020	Open in IMG/M
3300027854\|Ga0209517_10030154	All Organisms → cellular organisms → Bacteria	4581	Open in IMG/M
3300027875\|Ga0209283_10958496	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300028536\|Ga0137415_10001187	All Organisms → cellular organisms → Bacteria	25798	Open in IMG/M
3300028536\|Ga0137415_10175494	All Organisms → cellular organisms → Bacteria	1970	Open in IMG/M
3300028906\|Ga0308309_10000089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	82190	Open in IMG/M
3300029636\|Ga0222749_10005558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5171	Open in IMG/M
3300031670\|Ga0307374_10021502	All Organisms → cellular organisms → Bacteria	8110	Open in IMG/M
3300031670\|Ga0307374_10126765	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300031672\|Ga0307373_10057050	All Organisms → cellular organisms → Bacteria	3905	Open in IMG/M
3300031753\|Ga0307477_10069229	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2437	Open in IMG/M
3300031962\|Ga0307479_10037081	All Organisms → cellular organisms → Bacteria	4669	Open in IMG/M
3300032770\|Ga0335085_10000744	All Organisms → cellular organisms → Bacteria → Acidobacteria	83864	Open in IMG/M
3300033402\|Ga0326728_10001160	All Organisms → cellular organisms → Bacteria	95175	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Aquatic	Environmental → Aquatic	12.50%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.54%
Freshwater	Environmental → Aquatic → Freshwater	6.73%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.85%
Sediment	Environmental → Aquatic → Sediment	1.92%
Peat	Environmental → Terrestrial → Peat	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.19%
Loam	Environmental → Terrestrial → Soil → Loam	10.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.73%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Clay	Environmental → Terrestrial → Soil → Clay	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.04%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.69%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.77%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	33.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.12%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	2.88%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031670	Soil microbial communities from Risofladan, Vaasa, Finland - OX-3	Environmental	Open in IMG/M
3300031672	Soil microbial communities from Risofladan, Vaasa, Finland - OX-2	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12637J13337_10001296	3300001137	Forest Soil	MRSFLAMLFYIDHKCDTQPAFRKTFLMFMLIFVLLLWSPWRPLLCPVLGVCPAPVVRADKAPEPKPIPRLPKHRKTNAPSPVQVPTEHLVQVAVQP*
JGI12635J15846_100685774	3300001593	Forest Soil	MRSFLAMLFYIDHKCDTQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVLGVCPAPVVRADAAPQPKPNSRLVKRVKRRSPPPSPAQIPGEPSVDAAVQP*
JGI12053J15887_100156441	3300001661	Forest Soil	MRSFLAMLFYIDHKCATQPGFRKTLLVFTLIFVFLLWSPWRPLLCPVFGVCPAPVVRADTTPQPKPQRPWMNHSKHLASPPAPVQIPAEHSVPAAPRQ*
Ga0062389_1000445244	3300004092	Bog Forest Soil	MLFYIDHKCATQPGFRKTFLVFTLIFVFLLWSPWRPLLCPVFGVCPAPVVRADPAPQPKAQPRRVKHVNPLALTPFPVQTPAEASIQATVQR*
Ga0058899_115666352	3300004631	Forest Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPFLCPVFGVCPAPVVRADNSAQPKPQGPRVKHSKRLASTPAPVQIPEEPPVQAPRQL*
Ga0066672_105027221	3300005167	Soil	RSFLALLFYVDYKCTTQPGFRKTLLVLTLIFVFLLWSPWRPLLCPVFGACPAPVVRADSAHQPNAQPNRVKHPERLSLTPASGQIPARYSVQAEVQPQASRDFSDR*
Ga0066685_101902382	3300005180	Soil	MRSCLAMVFYVDYKCATQPGFRKTLLVLTLIFVILLWSPWRPLLCPVFGVCPARVVLVHSALQPQARPRGVNPPKHIAPTQARVQIRAESPVQARLRP*
Ga0066682_109702861	3300005450	Soil	RACKGAEMRSSLAMLFYIDYKCSTQPGFRKTFFVLMLIFAFLVWSPWRPLLCPVFGVCSAPAVRGDSAPQPQSKPRREKRITRLAPTSDPVERSTKASLQVEFQQ*
Ga0070697_1003828832	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MRYLLAMLFYIDHKCDTQPAFRRTFLVLTLIFVLLLWSPWRPLLCPVLGVCPAPTVRADSAPQPKPIPHLAKHKKKIVPSPEQVPADSSDKVAVQP*
Ga0070730_100019623	3300005537	Surface Soil	MRSFLALLFYIDHKCATQPAFRKTFLVFTLIFALLLWSPWRPLLCPVFGVCPAPVVRADSAPQPKPVPRLAKHRKSIAASHVQVPAVSSDQVAIQP*
Ga0066702_100092977	3300005575	Soil	MRSFLALLFYVDYKCTTQPGFRKTLLVLTLIFVFLLWSPWRPLLCPVFGACPAPVVRADSAHQPNAQPNRVKHPERLSLTPASGQIPARYSVQAEVQPQASRDFSDR*
Ga0070762_100472641	3300005602	Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPGPVVHAESSAQPVPQGPRVKHSKRPASIPAPVQIPE*
Ga0075024_1005925912	3300006047	Watersheds	MRYLLAMLFYIDHKCDTQPAFRRTFLVLTLIFVLLLWSPWRPLLCPVLGVCPAPTMRADSAPQPKPIPHLAKHKKKIVPS
Ga0075017_1013665092	3300006059	Watersheds	MRYLLAMLFYIDHKCDTQPAFRRTFLVLTLIFVLLLWSPWRPLLCPVLGVCPAPTVRADTGPQPKTIPHLAKHKKRIA
Ga0070765_1000015667	3300006176	Soil	MTSFLALLFYIDHKCVTQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVFGICPAPTVRADIAPRPKPIPHLAKHKKRVAPSPDQVSAASSDQVAVQP*
Ga0073928_100148876	3300006893	Iron-Sulfur Acid Spring	MRSFLALLFYIDHKCTTQPAFRKTFLAFTLVFVVLLWSPWRPLLCPVLGVCPAPTVRADIAAQPKPVPHLGKHKKKIAPSPDQVPAESSDQVAVQP*
Ga0073928_100662682	3300006893	Iron-Sulfur Acid Spring	MRSFLALLFYIDHKCATQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVFGVCPAPIVRADTAPQRKPKLRRVKRLARLALAPATVPVPAESSVQAGVEP*
Ga0099793_101052302	3300007258	Vadose Zone Soil	ACEGIEMRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPAPVVRADTSAQPKPQGPRVKHSKRLASTPAPVQIPAELSVHPAAHP*
Ga0099794_100085843	3300007265	Vadose Zone Soil	MRYLLAMLFYIDHKCDTQPAFRKTLLVFTLIFALLLWSPWRPLLCPVLGVCPAPSVRADSAPQPKPVPRLAKQRKSIAARPVQVPAQPSDQVAVQP*
Ga0099829_109318671	3300009038	Vadose Zone Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPAPVVRADTSAQPKPQGPRVKHSKRLASTPAPVQIPEEPPVQAARRP*
Ga0099829_114430122	3300009038	Vadose Zone Soil	MRSLVAMLFYIDHKCDTQPAFRKTFLVFTLVFVFLLWSPWRPLLCPVFGVCPAPTVRADAAPQPKPSKHKKKIVPSPAQIPTEPSVDAAVQP*
Ga0099830_103878812	3300009088	Vadose Zone Soil	MRSLLAMLFYIDHKCATQPGFRKTFLLFTLIFVFLLWSPWRPLLCPVLGVCPAPVVRADAAPQPKPNSRLVKRVKRRSPAPSPAQIPAEPSVDAAVHP*
Ga0074045_106462901	3300010341	Bog Forest Soil	MKSFLALLFYFDYKCSTQPGFRKTFLVLTLIFVFLLWSPWRPLLCPVFGVCHAPVVPAGTAPQPKTKPRQVKRLARLAPTPAPVQIPAEPSVQAEIQP*
Ga0074044_111062251	3300010343	Bog Forest Soil	MRSFLALLFYFDYKCSTQPAFRKTFLVFTLIFVLLMWSPWRPLLCPVLGVCPAPNVRADTAPEPKSIPHLAKHKKKIVPSPDRVP
Ga0136449_1002112353	3300010379	Peatlands Soil	MRSFLALLFYFNYKCSTQPGFRKTFLVLMLIFVFLLWSPWRPLLCPVFGICHAPVVRAGTAPQPKPKPRQVKHLTHLAPTPAPLQIPAEPSVQAAIQP*
Ga0137364_100495403	3300012198	Vadose Zone Soil	MRSCLAMLFYVDYKCATQPGFRKTLLVLTLIFVILLWSPWRPLLCPVFGVCPARAVLVHSALQPQARPRGVNPPKHIAPTQARVQIRAESPVQARLRP*
Ga0137364_100608723	3300012198	Vadose Zone Soil	MRSWLVMLFYIDHKCATQPGFRKTLLVFTLIFVFLLWSPWRPLLCPVFGVCPARVVLVHSAPQPKAQPRRVNLPKRIAPTPARVQIPTEAPVQAGLRP*
Ga0137383_105204192	3300012199	Vadose Zone Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPAPVVRADTSAQPKPQGPRVKHSKHLASTPAPVQIPEEPPVQAARRP*
Ga0137382_100976272	3300012200	Vadose Zone Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPAPVVRADTSAQPKPQGPRVKHSKHLASTTAPVQIPEEPPVQAARRP*
Ga0137363_118130322	3300012202	Vadose Zone Soil	MRSLLAMLFYIDHKCDTQPALRKTFLVFTLIFVLLLWSPWRPLLCPVLGVCPAPSVRADSAPQPKPVPRLAKHRKSIAP
Ga0137362_105631552	3300012205	Vadose Zone Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPGPVVRADTPAQPKPQGPRVKHSERLASTPAPVQIPEEPPVQAARRP*
Ga0137362_107432381	3300012205	Vadose Zone Soil	MRYLLAMLFYIDHKCDTQPAFRKTLLVFTLIFALLLWSPWRPLLCPVLGVCPAPSVRADSAPQPKPVPRLAKQRKSIAARPVQVPAQPSDQVA
Ga0137381_101139701	3300012207	Vadose Zone Soil	MRSFLALLFYVDYKCTTQPGFRKTLLVLTLIFVFLLWSPWRPLLCPVFGVCSAPAVRGDFAPQPQSKPRREKRATRLAPTSDPVERSAKPSLQAEFQQ*
Ga0137384_106012992	3300012357	Vadose Zone Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPGPVVRADTSTQPKPQGPRVKHSKRLASTPAPVQIPEEPPV
Ga0137360_105925462	3300012361	Vadose Zone Soil	MLFYVDYKCTTQPGFRKTFLVLTLIFVILLWSPWRPLLCPVFGVCPARVVLVHSVLQPQAQPRRVNLPKRIAPTEARVPIRAKSPVQAGLRP*
Ga0137390_1001108811	3300012363	Vadose Zone Soil	MRSFLAMLFYIDHKCDTQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVLGVCPAPVVRADTAPQPKPIPRLPKHRKSNAPSPVQVPTEPSVQVAVQP*
Ga0137358_101545162	3300012582	Vadose Zone Soil	MRSCLAMLFYVDYKCATQPGFRKTLLVLTLIFVILLWSPWRPLLCPVFGVCPARAVLVHSALQPQAQPRRVNPPKRIAPTPARVQIRAESPVQAGLRP*
Ga0137358_103615362	3300012582	Vadose Zone Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPAPVIRADTSAQPKPQGPRVKHSKRLASTPAPVQIPEEPPVQAARRP*
Ga0137398_102616543	3300012683	Vadose Zone Soil	MRSLLAMLFYIDHKCDTQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVLGVCPAPAVRADTAPQPKPIPHLAKHKKRIAPSPDQVP
Ga0137398_103107692	3300012683	Vadose Zone Soil	MRSFLAMLFYVDYKCNTQPGFRKTFLVLTLIFVILLWSPWRPLLCPVFGVCPARVVLVHSAPQPKAQPRRVNLPKRIAPTPARVQIPTEAPVQAGLRR*
Ga0137396_110714071	3300012918	Vadose Zone Soil	MRYLLAMLFYIDHKCDTQPAFRRTFLVLTLIFVLLLWSPWRPLLCPVLGVCRTPTVRADTAPRPKPISHLAKHKKRIA
Ga0137359_102770412	3300012923	Vadose Zone Soil	FLALLFYIDHKCATQPAFRKTLLLFTLIFVLLLWSPWRPLLCPVFGVCPAPIVRADSAPQSEAKHRPQKRVKHLVPTAAQVQTPADASVQAAVRP*
Ga0137419_100478922	3300012925	Vadose Zone Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPAPVVRADTSAQPKAQGTRVKRSKRLASTPAPVQIPAELSVHPAAHP*
Ga0137419_103454162	3300012925	Vadose Zone Soil	MLFYVDYKCATQPGFRKTLLVLTLIFVILLWSPWRPLLCPVFGVCPARAVLVHSALQPQARPRGVNPPKHIAPTQARVQIRAESPGQARLRP*
Ga0137416_106857431	3300012927	Vadose Zone Soil	MRSFLAMLFYIDHKCATQPGFRKTLLVFTLIFVFLLWSPWRPLLCPVFGVCPAPVVRADAAPQRKPKLRRVKEIKGLGVTSDPVQTPAKPSAHVVVHP*
Ga0137410_106139211	3300012944	Vadose Zone Soil	MRSWLAMLFYIDHKCATQPGFRKTLLVFILIFAFLVWSPWRPLLCPVFGVCPAPIVRADASAQPKPQGPRINHSKRLASNHAPVQIPAEPSVQAGDHP*
Ga0181527_10256715	3300014153	Bog	MRCLLAMMFYIDHKCDTQPAFRKTFLVFTLVFVFLLWSPWRPLLCPVLGVCPAPTVRADAAPQPKPIPHLAKHKKKIAPSPAQIPAEPSVDAAVQP*
Ga0181518_101066791	3300014156	Bog	SAACEGVEMRCLLAMMFYIDHKCDTQPAFRKTFLVFTLVFVFLLWSPWRPLLCPVLGVCPAPTVRADAAPQTKPIPHLAKDKKKIAPSPAQIPAEPSVDAAVQP*
Ga0181521_100281128	3300014158	Bog	MRCLLAMMFYIDHKCDTQPAFRKTFLVFTLVFVFLLWSPWRPLLCPVLGVCPAPTVRADAAPQTKPIPHLAKDKKKIAPSPAQIPAEPSVDAAVQP*
Ga0181523_103431641	3300014165	Bog	AACEGIEMRYLLAMLFYIDHKCDTQPAFRRTFLVLTLIFVLLLWSPWRPLLCPVLGVCPAPTVRADTAPQPKPIPHLAKHKKKIVPSPDQVPADSSDKVAVQP*
Ga0137418_100074873	3300015241	Vadose Zone Soil	MRSCLAMLFYVDYKCATQPGFRKTLLVLTLIFVILLWSPWRPLLCPVFGVCPARAVLVHSALQPQARPRGVNPPKHIAPTQARVQIRAESPGQARLRP*
Ga0137418_1002719610	3300015241	Vadose Zone Soil	ERPSGAGYWFRNAACEGVEMRSLLAMLFYIDHKCDTQPAFRKTFLVFTLVFVFLLWSPWRPLLCPVLGVCPAPTVRADAAPQPKPIPHLAKRKKKIAPSPAQIPAEPSVDAAVQP*
Ga0137409_100080382	3300015245	Vadose Zone Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPGPVVRADTSAQPKPQGPRVKHSKRLASTPAPVQIPEEPPVQAARRP*
Ga0137403_100299792	3300015264	Vadose Zone Soil	MRYLLAMLFYIDHKCDTQPAFRKTLLVFTLIFALLLWSPWRPLLCPVLGVCPAPTVRADSAPQPKSIPHLAKHKKKIVPSPDQVPADSSDKVAVQP*
Ga0187849_10925323	3300017929	Peatland	MRSLLAMLFYIDHKCDTQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVLGVCPAPNVRADTAPEPKSIPHLAKHKKKIAPSPDRVP
Ga0187819_1000000868	3300017943	Freshwater Sediment	MRSFLALLFYIDHKCATQPAFRKTFLVFTLIFVVLLWSPWRPLLCPVLGVCPAPVVRADTAPQPKPIPRLAKHRKRIASRPDQVPAEPWRQVAVQP
Ga0066667_110399542	3300018433	Grasslands Soil	MRYLLAMLFYIDHKCDTQPAFRRTFLVLTLIFVLLLWSPWRPLLCPVLGVCPAHTVRADSAPQLKPIPHLARHKKKIVPSPGQVP
Ga0210407_100074905	3300020579	Soil	MRSFLAMLFYIDHKCDTQPAFRKTLLVFTLIFVLLLWSPWRPLLCPVLGVCRAPNVLADTAPQPKPIPHLAKHKKKIVPSPVQVPAESSDQVTVQP
Ga0210407_101560952	3300020579	Soil	MRFWLAMLFYIDHKCTTQPGFQKTFLVLILIFVFLLWSPWRPLLCPVFGVCPAPVVRADTSAQPQPQGPRVKHSKRPASIPAPVQIPE
Ga0210399_100181573	3300020581	Soil	MRSFLALLFYIDYKCSTQPGFRKTFLVFTLIFVFLLWSPWRPLLCPTFGVCPARVVRANAAPQPKPKLHQGKDLKRLAGTQAPSQTPAESPIQPAVHPQSQ
Ga0210399_115076281	3300020581	Soil	MRSFLAMLFYVDYKCDTQPGFRKALLVFMLIFVLLLWSPWRPLLCPEFGVCPAPVVRADTAPQRKPKRRDVKDLKKLPATPAPIQIPAAPVAQ
Ga0210401_1000009783	3300020583	Soil	MRSLLAMMFYIDHKCDTQPAFRKMFLVFTLIFVLLLWSPWRPLLCPVLGVCPAPTVRADTAPQPKPIPHLAKHKKRIAPSPDQVPAESSDQVAAQP
Ga0210401_101527243	3300020583	Soil	MRSWLATLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPGPVVHAESSAQPVPQGPRVKHSKRPASIPALVQIPE
Ga0215015_107260012	3300021046	Soil	MRSLLAMLFYIDHKFDTQPAFRKTFLVFTLILVLLLWSPWRPLLCPVLGVCPAPVVGADTAPQPKPNSRLVKRVNRRSPAPSPAQIPAEPSVDAAVQP
Ga0179596_100288202	3300021086	Vadose Zone Soil	MRSLLAMLFYIDHKCDTQPAFRKTFLVFTLVFVLLLWSPWRPLLCPALGVCPAPIVRADTALQRKPKLRRVKRLARLAPTPATVQVPAESSVQAAVEP
Ga0210400_100284334	3300021170	Soil	MRSLLAMLFYIDHKCDTQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVLGVCPAPNVRADTAPQPKSIPHLAKDKKKIAPSPNRVPAESSDQVAVQP
Ga0210400_100549063	3300021170	Soil	MRSFLAMVFYIDYKCATQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVLGVCQAPVVRADTAPHAKPIPRLTKHRKSIAPSPVQISAEPSDQVPVQP
Ga0210405_100166124	3300021171	Soil	MRSLLAMLFYIDHKCDTQPAFSKTLLVFTLIFVLLLWSPWRPLLCPVLGVCPAPVVRADTAPQPKLIPRPAKHKKSIAPSPVQVPAEPSNQVAVQP
Ga0210405_100259273	3300021171	Soil	MRSFLALLFYIDHKCTTQPAFRKTFLVFTLIFVFLLWSPWRPLLCPVFGVCPAPIVRADTAPQPKPIPRLSKHRKTNALSPVQFPAKPSD
Ga0210393_100174246	3300021401	Soil	MRSFLALLLYIDHKCDTQPAFRKTLLVFTLIFALLLWSPWRPLLCPVFGVCPAPVVRADSAPQPKPVPRLAKHRKSIAPSPVQVPAVSSDQVAIQP
Ga0210385_101558792	3300021402	Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPFLCPVFGVCPAPVVRADTSAQPKPRGPRVKHSKRLASTPAPAQIPEEPPVQAARWP
Ga0210394_1000578219	3300021420	Soil	MRSLLAMLFYIDHKCDTQPAFRRTFLVLTLIFVLLLWSPWRPLLCPVLGVCPAPTVRADSAPQPKPIPHLPKHEKKIVPSPGQVPADSSDKVAVQP
Ga0210394_100239122	3300021420	Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPGAVVRAEGSAQPKPQGPRVKHSKLLASTPAPVQIPEEPPVQAAPRP
Ga0210394_100539784	3300021420	Soil	MRSFLAMLFYVDHKCNTQPGFRKTLLVLTLIFVFLLWSPWRPLLCPVFGVCPAPVVRADTSLQPNAQRRPVKHSKRLASTPAQFPAESSVQPAVHP
Ga0210394_101239783	3300021420	Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPAPVVRADTSAQPMPQGPRVKHSKRLASTPAPVQTPE
Ga0210384_100626766	3300021432	Soil	MRSWLAMLFYIDHKCTTQPGSRKTFLVLILIFVFLLWSPWRPFLCPVFGVCPAPVVRADTSAQPKPQGPRVKHSKRLASTPAPVQIPDEPPVQAARRP
Ga0210391_101960813	3300021433	Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPFLCPVFGVCPAPVVRADNSAQPKPQGPRVKHSKRIASTPAPVQIPEEPPVQAPRQL
Ga0210410_1000020656	3300021479	Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILVFVFLLWSPWRPLLCPVFGVCPAPVVRADASTESKSQGPHLKRFKRLASTPAPVQIVPESSVQSSARP
Ga0210410_100784363	3300021479	Soil	MRFFLALLFYIDHKCATQPAFRKTLLLFTLIFVLLLWSPWRPLLCPVFGVCPAPIVRADSAPQSEAKHRPQKRIKHLVPTAARVQTPADASVQAAVRP
Ga0210409_100073824	3300021559	Soil	MRSFLALLFYIDHKCATQPAFRKTFLVFTLVFVLLLWSPWRPLVCPVFGVCPAPLVRADTTPRSKPKLRPVKHIARLAPTPATVQVPAESSVQAAVEP
Ga0210409_100569252	3300021559	Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPAPVVRADTSAQPKPQGPRVNHSRRPASTPTLIQIPAEPSVQAAPHP
Ga0212123_100255295	3300022557	Iron-Sulfur Acid Spring	MRSFLALLFYIDHKCTTQPAFRKTFLAFTLVFVVLLWSPWRPLLCPVLGVCPAPTVRADIAAQPKPVPHLGKHKKKIAPSPDQVPAESSDQVAVQP
Ga0212123_100965502	3300022557	Iron-Sulfur Acid Spring	MRSFLALLFYIDHKCATQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVFGVCPAPIVRADTAPQRKPKLRRVKRLARLALAPATVPVPAESSVQAGVEP
Ga0209483_10129667	3300025862	Arctic Peat Soil	MRSILTLLFYVDYKCETQPGFRKTFLVFTLIFVILLWSPWRPLLCPVFGVCPAPVVRADTAAQVKPTPRRVKRLTRLTRTTPPVQIPVEPSVQSVLQP
Ga0209648_100304863	3300026551	Grasslands Soil	MRSFLALLFYIDHKCATQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVFGVCPAPVVRADSAPQPKPVPRLAKHRKSIAPSPAQVPPEPSEQVAVQP
Ga0209648_101723081	3300026551	Grasslands Soil	MRSLLAMLFYIDHKCDTQPAFRKTFLVFTLIFVLLLWSPWPPLLCPVLGVCPAPNVRADTAPQPKSIPHLAKRKKKIAPSPDRVPAESSDQVAVQP
Ga0209577_100520376	3300026552	Soil	MRSFLALLFYVDYKCTTQPGFRKTLLVLTLIFVFLLWSPWRPLLCPVFGACPAPVVRADSAHQPNAQPNRVKHPERLSLTPASGQIPARYSVQAEVQPQASRDFSDR
Ga0209527_10022935	3300027583	Forest Soil	MRYFLAMLFYVDYKCTTQPGFRKTFLVLTLIFVILLWSPWRPLLCPVFGVCPARVVLVHSVLQPQAQPRRVNLPKRIAPTQARVQIRAESPVQAGLRP
Ga0209733_10243221	3300027591	Forest Soil	MRSFLAMLFYIDHKCDTQPAFRKTFLAFTLIFVLLLWSPWRPLLCPVLGVCPAPTVRADTAPQPKPIPHLAKHKKKI
Ga0209736_10014566	3300027660	Forest Soil	MRSFLAMLFYIDHKCDTQPAFRKTFLMFMLIFVLLLWSPWRPLLCPVLGVCPAPVVRADKAPEPKPIPRLPKHRKTNAPSPVQVPTEHLVQVAVQP
Ga0209588_10042794	3300027671	Vadose Zone Soil	MRYLLAMLFYIDHKCDTQPAFRKTLLVFTLIFALLLWSPWRPLLCPVLGVCPAPSVRADSAPQPKPVPRLAKQRKSIAARPVQVPAQPSDQVAVQP
Ga0209517_100301547	3300027854	Peatlands Soil	MRYLLAMLFYIDHKCDTQPAFRRTFLVLTLIFVLLLWSPWRPLLCPVLGVCPAPTVRADTAPQPKRIPHLAKHKKKIAPSPDQVPAESSDKVAVQP
Ga0209283_109584961	3300027875	Vadose Zone Soil	MRSFLALLFYIDHKCTTQPGFRKTFLVFTLIFVFLLWSPWRPLLCPVLGVCPAPVVRADAAPQPKPNSRLVKRVKRRSPAP
Ga0137415_1000118717	3300028536	Vadose Zone Soil	MRSWLAMLFYIDHKCTTQPGFRKTFLVLILIFVFLLWSPWRPLLCPVFGVCPAPVVRADTSAQPKAQGTRVKRSKRLASTPAPVQIPAELSVHPAAHP
Ga0137415_101754943	3300028536	Vadose Zone Soil	MRYLLAMLFYIDHKCDTQPAFRRTFLVLTLIFVLLLWSPWRPLLCPVLGVCPAPTVRADSAPQPKPIPHLAKHKKKIVPSPDQVPADSSDKVAVQP
Ga0308309_1000008981	3300028906	Soil	MTSFLALLFYIDHKCVTQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVFGICPAPTVRADIAPRPKPIPHLAKHKKRVAPSPDQVSAASSDQVAVQP
Ga0222749_100055586	3300029636	Soil	MKSFLALLLYIDHKCDTQPAFRKTLLVFTLIFAFLLWSPWRPLLCPVFGVCPAPIVRADTGSQPEPKPHHTKGIKRQTPAPNQAPRESSVQPAVRPQSP
Ga0307374_100215026	3300031670	Soil	MRSFLALLFYIDYKCDTQPGFRKALLVFTLIFVFLLWSPWRPLLCPVFGVCPAPVVRADTAPQPKPLGSRVKRSKLLASTPTPIQIPAEPSAQAAAHP
Ga0307374_101267653	3300031670	Soil	MRSILTLLFYVDYKCDTQPGFRRTFLVFTLIFVILLWSPWRPLLCPVFGVCPTPVVRADTAPQLKPAPRRVKRLARTPPPVQIPVEPSVQSVLQP
Ga0307373_100570508	3300031672	Soil	MRSFLAMLFYVDYKCDTQPGFRKTLLVFTLIFVFLLWSPWRPLLCPVFGVCPAPVVRADTAPQPEPLPRRVKRLTRLAPTPVPVQIPVEPSVQTVLQP
Ga0307477_100692293	3300031753	Hardwood Forest Soil	MRYLLAMLFYIDHKCDTQPAFRRTFLVLTLIFVLLLWSPWRPLLCPVLGVCTAPTVRADSAPQPKPIPHLAKHKKKIVPSPAQVPADSSDKVAVHRKLLQKNILTVVFR
Ga0307479_100370812	3300031962	Hardwood Forest Soil	MRSFLALLFYLDHKCATEPAFRKTFLVFALIFVLLLWSPWRPLLCPVFGVCPAPVVRADTAPQPKPIPRVAKHRKSIAPSPVRVPAEASVQPAVEQ
Ga0335085_1000074466	3300032770	Soil	MRSFLAMLFYIDHKCDTQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVLGVCPAPVVRADAAPQPKPNSRLVKRVKRRSPAPSPAQIPAEPSVDAAVQP
Ga0326728_1000116074	3300033402	Peat Soil	MRSLLAMLFYIDHKCDTQPAFRKTFLVFTLIFVLLLWSPWRPLLCPVLGVCPAPNVRADTAPEPKSIPHLAKHKKKIAPSPDRVPAESSDQVAVQP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097751

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences