Metagenome / Metatranscriptome Family F097749

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097749
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	93 residues
Representative Sequence	VRSGRFGFGGGREAVVVVVVDGVADGFAPAARAERVDVFVLGDVDGLQESLGQVGDGVGGFGFYIAADNGGDEACQGGAEIAGGEVVAGEEVVQVF
Number of Associated Samples	63
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.04 %
% of genes near scaffold ends (potentially truncated)	66.35 %
% of genes from short scaffolds (< 2000 bps)	75.00 %
Associated GOLD sequencing projects	56
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (92.308 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (73.077 % of family members)
Environment Ontology (ENVO)	Unclassified (67.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (73.077 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00144	Beta-lactamase	8.65
PF04023	FeoA	2.88
PF03793	PASTA	2.88
PF13561	adh_short_C2	1.92
PF01327	Pep_deformylase	1.92
PF00924	MS_channel	0.96
PF01915	Glyco_hydro_3_C	0.96
PF02569	Pantoate_ligase	0.96
PF01381	HTH_3	0.96
PF02223	Thymidylate_kin	0.96
PF05167	DUF711	0.96
PF14579	HHH_6	0.96
PF00221	Lyase_aromatic	0.96
PF01966	HD	0.96
PF00578	AhpC-TSA	0.96
PF04055	Radical_SAM	0.96
PF02737	3HCDH_N	0.96
PF10131	PTPS_related	0.96
PF13847	Methyltransf_31	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2367	Beta-lactamase class A	Defense mechanisms [V]	8.65
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	8.65
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	8.65
COG1918	Fe2+ transport protein FeoA	Inorganic ion transport and metabolism [P]	2.88
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	1.92
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.96
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.96
COG2986	Histidine ammonia-lyase	Amino acid transport and metabolism [E]	0.96
COG2848	Uncharacterized conserved protein, UPF0210 family	Cell cycle control, cell division, chromosome partitioning [D]	0.96
COG2084	3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase	Lipid transport and metabolism [I]	0.96
COG1748	Saccharopine dehydrogenase, NADP-dependent	Amino acid transport and metabolism [E]	0.96
COG0125	Thymidylate kinase	Nucleotide transport and metabolism [F]	0.96
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.96
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0414	Panthothenate synthetase	Coenzyme transport and metabolism [H]	0.96
COG0287	Prephenate dehydrogenase	Amino acid transport and metabolism [E]	0.96
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	92.31 %
Unclassified	root	N/A	7.69 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	86.54 %
Unclassified	root	N/A	7.69 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	5.77 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.81 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.96 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.81 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.96 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.81 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.96 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.81 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.96 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	7.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.81 %
Streptomyces sp. HmicA12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. HmicA12	0.96 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	0.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_100694078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. HmicA12	744	Open in IMG/M
3300005332\|Ga0066388_102431181	All Organisms → cellular organisms → Bacteria → Acidobacteria	951	Open in IMG/M
3300005542\|Ga0070732_10553105	All Organisms → cellular organisms → Bacteria → Acidobacteria	698	Open in IMG/M
3300005556\|Ga0066707_10255534	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300005598\|Ga0066706_10320651	All Organisms → cellular organisms → Bacteria → Acidobacteria	1223	Open in IMG/M
3300006176\|Ga0070765_100010575	All Organisms → cellular organisms → Bacteria	6437	Open in IMG/M
3300006176\|Ga0070765_100235310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1675	Open in IMG/M
3300006893\|Ga0073928_10004069	All Organisms → cellular organisms → Bacteria	22162	Open in IMG/M
3300007258\|Ga0099793_10504344	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300007265\|Ga0099794_10215093	All Organisms → cellular organisms → Bacteria → Acidobacteria	986	Open in IMG/M
3300007265\|Ga0099794_10280431	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300007265\|Ga0099794_10546883	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300007265\|Ga0099794_10676110	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300009012\|Ga0066710_100570766	All Organisms → cellular organisms → Bacteria → Acidobacteria	1713	Open in IMG/M
3300009038\|Ga0099829_10231398	All Organisms → cellular organisms → Bacteria → Acidobacteria	1504	Open in IMG/M
3300009088\|Ga0099830_10090157	All Organisms → cellular organisms → Bacteria → Acidobacteria	2268	Open in IMG/M
3300009088\|Ga0099830_10517218	All Organisms → cellular organisms → Bacteria → Acidobacteria	975	Open in IMG/M
3300009088\|Ga0099830_10933761	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300009088\|Ga0099830_11024577	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300009088\|Ga0099830_11256667	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300009088\|Ga0099830_11344601	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300009089\|Ga0099828_10677564	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300009089\|Ga0099828_11695068	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300009090\|Ga0099827_10077668	All Organisms → cellular organisms → Bacteria → Acidobacteria	2582	Open in IMG/M
3300009090\|Ga0099827_10083190	All Organisms → cellular organisms → Bacteria → Acidobacteria	2505	Open in IMG/M
3300009137\|Ga0066709_102454659	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300009143\|Ga0099792_10059549	All Organisms → cellular organisms → Bacteria → Acidobacteria	1891	Open in IMG/M
3300011269\|Ga0137392_10025989	All Organisms → cellular organisms → Bacteria → Acidobacteria	4184	Open in IMG/M
3300011269\|Ga0137392_10161444	All Organisms → cellular organisms → Bacteria → Acidobacteria	1815	Open in IMG/M
3300011269\|Ga0137392_10275268	All Organisms → cellular organisms → Bacteria → Acidobacteria	1388	Open in IMG/M
3300011269\|Ga0137392_10437289	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300011269\|Ga0137392_10686045	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300011269\|Ga0137392_10689137	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300011269\|Ga0137392_10890668	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300011269\|Ga0137392_10913144	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300011269\|Ga0137392_11469810	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300011270\|Ga0137391_10014398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6408	Open in IMG/M
3300011271\|Ga0137393_10073887	All Organisms → cellular organisms → Bacteria → Acidobacteria	2727	Open in IMG/M
3300011271\|Ga0137393_10535464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1005	Open in IMG/M
3300011271\|Ga0137393_10669380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	889	Open in IMG/M
3300011271\|Ga0137393_10880029	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300012096\|Ga0137389_10673312	All Organisms → cellular organisms → Bacteria → Acidobacteria	889	Open in IMG/M
3300012189\|Ga0137388_11399914	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300012199\|Ga0137383_10965160	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300012202\|Ga0137363_10188572	All Organisms → cellular organisms → Bacteria → Acidobacteria	1647	Open in IMG/M
3300012202\|Ga0137363_10217029	All Organisms → cellular organisms → Bacteria → Acidobacteria	1542	Open in IMG/M
3300012202\|Ga0137363_10731374	All Organisms → cellular organisms → Bacteria → Acidobacteria	838	Open in IMG/M
3300012205\|Ga0137362_10366731	All Organisms → cellular organisms → Bacteria → Acidobacteria	1247	Open in IMG/M
3300012205\|Ga0137362_10550124	All Organisms → cellular organisms → Bacteria → Acidobacteria	997	Open in IMG/M
3300012205\|Ga0137362_10743667	All Organisms → cellular organisms → Bacteria → Acidobacteria	842	Open in IMG/M
3300012205\|Ga0137362_10852000	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300012205\|Ga0137362_11570687	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300012207\|Ga0137381_10281780	All Organisms → cellular organisms → Bacteria → Acidobacteria	1446	Open in IMG/M
3300012207\|Ga0137381_10474259	All Organisms → cellular organisms → Bacteria → Acidobacteria	1092	Open in IMG/M
3300012207\|Ga0137381_11321850	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300012209\|Ga0137379_10420561	All Organisms → cellular organisms → Bacteria → Acidobacteria	1245	Open in IMG/M
3300012210\|Ga0137378_10257436	All Organisms → cellular organisms → Bacteria → Acidobacteria	1624	Open in IMG/M
3300012210\|Ga0137378_10470890	All Organisms → cellular organisms → Bacteria → Acidobacteria	1162	Open in IMG/M
3300012210\|Ga0137378_11012855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300012351\|Ga0137386_10172106	All Organisms → cellular organisms → Bacteria → Acidobacteria	1552	Open in IMG/M
3300012361\|Ga0137360_10008517	All Organisms → cellular organisms → Bacteria	6433	Open in IMG/M
3300012361\|Ga0137360_10217351	All Organisms → cellular organisms → Bacteria → Acidobacteria	1555	Open in IMG/M
3300012363\|Ga0137390_10030284	All Organisms → cellular organisms → Bacteria → Acidobacteria	5147	Open in IMG/M
3300012363\|Ga0137390_11054130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300012582\|Ga0137358_10106394	All Organisms → cellular organisms → Bacteria → Acidobacteria	1902	Open in IMG/M
3300012917\|Ga0137395_10687622	Not Available	740	Open in IMG/M
3300012918\|Ga0137396_10350361	All Organisms → cellular organisms → Bacteria → Acidobacteria	1093	Open in IMG/M
3300012925\|Ga0137419_10186123	All Organisms → cellular organisms → Bacteria → Acidobacteria	1527	Open in IMG/M
3300012925\|Ga0137419_10214112	All Organisms → cellular organisms → Bacteria → Acidobacteria	1434	Open in IMG/M
3300012929\|Ga0137404_10272662	All Organisms → cellular organisms → Bacteria → Acidobacteria	1459	Open in IMG/M
3300012930\|Ga0137407_10020305	All Organisms → cellular organisms → Bacteria → Acidobacteria	4975	Open in IMG/M
3300015241\|Ga0137418_11047052	All Organisms → cellular organisms → Bacteria → Acidobacteria	586	Open in IMG/M
3300015264\|Ga0137403_10007214	All Organisms → cellular organisms → Bacteria	12572	Open in IMG/M
3300018431\|Ga0066655_10854815	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300020199\|Ga0179592_10119404	Not Available	1210	Open in IMG/M
3300020580\|Ga0210403_10206187	All Organisms → cellular organisms → Bacteria → Acidobacteria	1613	Open in IMG/M
3300020582\|Ga0210395_10365392	All Organisms → cellular organisms → Bacteria → Acidobacteria	1086	Open in IMG/M
3300021086\|Ga0179596_10616569	All Organisms → cellular organisms → Bacteria → Acidobacteria	550	Open in IMG/M
3300021168\|Ga0210406_10859297	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300021171\|Ga0210405_10085417	All Organisms → cellular organisms → Bacteria → Acidobacteria	2487	Open in IMG/M
3300021181\|Ga0210388_10098522	All Organisms → cellular organisms → Bacteria → Acidobacteria	2501	Open in IMG/M
3300021478\|Ga0210402_10687931	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300021479\|Ga0210410_11305126	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300022557\|Ga0212123_10005694	All Organisms → cellular organisms → Bacteria	21779	Open in IMG/M
3300022557\|Ga0212123_10064778	All Organisms → cellular organisms → Bacteria → Acidobacteria	3198	Open in IMG/M
3300026296\|Ga0209235_1058140	All Organisms → cellular organisms → Bacteria → Acidobacteria	1821	Open in IMG/M
3300026528\|Ga0209378_1023866	All Organisms → cellular organisms → Bacteria → Acidobacteria	3347	Open in IMG/M
3300026555\|Ga0179593_1154126	All Organisms → cellular organisms → Bacteria → Acidobacteria	3478	Open in IMG/M
3300027172\|Ga0208098_1024574	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300027671\|Ga0209588_1099481	All Organisms → cellular organisms → Bacteria → Acidobacteria	936	Open in IMG/M
3300027783\|Ga0209448_10035460	All Organisms → cellular organisms → Bacteria → Acidobacteria	1673	Open in IMG/M
3300027862\|Ga0209701_10170901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1314	Open in IMG/M
3300027882\|Ga0209590_10376841	All Organisms → cellular organisms → Bacteria → Acidobacteria	916	Open in IMG/M
3300028536\|Ga0137415_10140631	All Organisms → cellular organisms → Bacteria → Acidobacteria	2253	Open in IMG/M
3300029636\|Ga0222749_10825326	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300031718\|Ga0307474_10554152	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300031962\|Ga0307479_10191275	All Organisms → cellular organisms → Bacteria → Acidobacteria	2014	Open in IMG/M
3300032180\|Ga0307471_100334816	All Organisms → cellular organisms → Bacteria → Acidobacteria	1617	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.19%
Aquatic	Environmental → Aquatic	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.19%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.88%
Freshwater	Environmental → Aquatic → Freshwater	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.35%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.88%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	74.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.85%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.92%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	73.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.85%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1006940781	3300004091	Bog Forest Soil	VVVVGVYGGADGFAPAVGAEGVDVFMLGDVDGLQLGLEHIGDGAGESGLYIAADYGGDEAGHDGAEVARGKIVAGEEAGE
Ga0066388_1024311811	3300005332	Tropical Forest Soil	MGSLTRGRFGCGSGSWRKAVVVVAFNGIADGLAPAIRGEGVDVFVLGNVDGLHESLDQVGNGVGGSRFYVAADDGGDEARQGGPKIAGGKVVAGEEEGEVFAEFI
Ga0070732_105531051	3300005542	Surface Soil	VLFGVGFRIGREAVIVVAVDGVADGFAPAVGAESVDVFVLGDVDGLHECLDEVGDGVGGFGFYIAADNGGDEARQGDAEIAGGEVV
Ga0066707_102555341	3300005556	Soil	LRLEGSRLFVLGFGREEVVVVGVDGIADGFAPAVRVEGVDVFVLGDVDGLQESLGQIGDGSGGFGFYIAADYGGDEACQGGAEIAGGEVVAGEEVGQVFAEF
Ga0066706_103206513	3300005598	Soil	MTIRGRWGGGGLLGLFGFGGGREAVVVVAFDGVADGLSPAVGAEGVDVFVLGDADRLHERLGQVGNGASGSGFYIAADDGGDEARQCGAEIAGGEVVAGEEV
Ga0070765_1000105757	3300006176	Soil	MRLGTFGLLWPRGGWEAVVVVDVDGGADGFAPAVGAEGVDVFVLGKVDGLQLGLEHVGHGTGESGFDIAADHGGDEARQGGAEVAGGEVVAGE
Ga0070765_1002353103	3300006176	Soil	LDLRRGRRCGLFGFWGGGKAVVVVGVYGGADGFAPAVGAEGVDVFMLGDVDGLQLGLQHVGDGAGESGLYIAADYGGDEAGGGGAEIAGSEVIAGEKAGDVFGE*
Ga0073928_1000406923	3300006893	Iron-Sulfur Acid Spring	VAVDGVADGFAPAVAAEGVDVFVLGEVDGLQLGLEHVSDGAGEFGFYFAADYGGDESREGGAEIASGEVIAREK*
Ga0099793_105043441	3300007258	Vadose Zone Soil	LGVGREEVVVVAVDGVADGLAPGIGAEGLAIFVLGDVDGLHEGLGQIGDGVGSFGFYIAADNGGDEAAQGGAEIAGGEVVAGEEVGQVFAEFFC
Ga0099794_102150932	3300007265	Vadose Zone Soil	LGWFGLFGFGIGREAVVAVAVDGGADGIAPGVGAEGVDVFVLGDVDGLHESLGQVGDGMCGFGFYIAADNGGDEVGQGGAEIAGGEV
Ga0099794_102804311	3300007265	Vadose Zone Soil	LWLGGARSLTPPDQVGINSGVSYSGGLRLGRFAPQIRPERRKRGLFGFGVGREEVVAVAVDGVADGFAPAVRAEGVDVFVLGEVNGLHESLGQVGDGVGGFGFYIAADNGG
Ga0099794_105468831	3300007265	Vadose Zone Soil	LGFGVGREEVVVVVVDGIADGFAPAVGAEGVGVFVLGDVDGLHESLGQVGDGVGGFGLYIAADNGGDEACQGGAEIAG
Ga0099794_106761101	3300007265	Vadose Zone Soil	VVGVDGVANGFAPPVGAESVDVFVLREVDGLHESLGQVGDGVGGFGFYIAADNGGDETCQGGAEIAGGEVVAGEEVVQVFAEFLRGAGAGFFLGVV
Ga0066710_1005707661	3300009012	Grasslands Soil	LGLFGFGGGREAVVVVAFDGVADGLSPAVGAEGVDVFVLGDVDRLHERLGQVGNGASGSGFYIAADDGGDEARQGGAEIAGGEVVAGEEVGQVFAEFLRG
Ga0099829_102313982	3300009038	Vadose Zone Soil	LGGGREEVVVVGVDGVADGFAPAVGAESVDVFVLREVDGLHESLDQVSDGVGGFGFYIAAENGGDETRQGGTEIAGGEVVAG
Ga0099830_100382825	3300009088	Vadose Zone Soil	LRLERFGLFGFGGRVGFRSGWEEVVVVVVDGVADGLAPAVGAEGVDVFLLGDVDGLQESLGQVGDGAGGFGFYIATDNGGDEACQGGAEIAGREVVAGEEVGEVFAEFLRGAG
Ga0099830_100901572	3300009088	Vadose Zone Soil	MTIYAGFGGLFGFGGGREAVVIVAVDGFADRFAPVAGVERVDVFVLGDLDGLQEGLGHVGDGASDLGLYIAADNGGDEAAQGGAEIAGGEVVAGEVVG*
Ga0099830_105172181	3300009088	Vadose Zone Soil	LGGLGLRLGRFGLFAFGVGWEDVVVVAVDGVADGFAPVVGVEGVDVFLLGDVDGLQEGLGQVGDGAGGFGFYIAADNGGDETRQGGAEIAGGE
Ga0099830_109337611	3300009088	Vadose Zone Soil	VSYRRYRCGLGLRLERLGRLGLGGGREEVVAIAVDGVADGFAPAVRAERVDVFLLGDMDGLQEGLGQVGDGVGGFGFYIAADNGGDEACQGGAEIAGGEV
Ga0099830_110245772	3300009088	Vadose Zone Soil	VRSGRFGLGVGWEAVVVVVVDGVADGFAPAVRAERVDVLVLGEVDGLHESLGQVGDGVGGFGFYIAADNGGDETCQGGAQIAGGEVVAGE
Ga0099830_112566671	3300009088	Vadose Zone Soil	LGVGREEVVVVAVDGVADGLAPGIGAEGLAIFVLGGVDGLHEGLGQIGDGVGSFGFYIAADNGGDEAAQGGAEIAGG
Ga0099830_113446011	3300009088	Vadose Zone Soil	LGFGVGREEVVVVVVDGIADGFAPAVGAEGVGVFVLGDVDGLHESLDQVGDGAGGFGFYIAADNGGDEACQGGAEIAGGEVVA
Ga0099828_106775642	3300009089	Vadose Zone Soil	MNSGVSYSSGLRLGWCGLFGFGVGREAVVVVGLDGNADGFAPAVRAEGVDVFVLGDVDGLHESLDQVGDGVGGFGLYIAAHNGGDEACQGG
Ga0099828_116950681	3300009089	Vadose Zone Soil	VRSGRFGFGGGREAVVVVVVDGVADGFAPAARAERVDVFVLGDVDGLQESLGQVGDGVGGFGFYIAADNGGDEACQGGAEIAGGEVVAGEEVVQVF
Ga0099827_100776682	3300009090	Vadose Zone Soil	LGFGVGREEVVVVVVDGIADGFAPAVGAEGVGVFVLGDVDGLHESLDQVGDGAGGFGFYIAADNGGDEACQGGAEIAGGEVVAGEEVG*
Ga0099827_100831901	3300009090	Vadose Zone Soil	LRLRLRLRLRGMRLRRFGFRGGREEVVVVAFDGIADGLAPVVGAEGVGVLVLGEVDGLHESLGQVGNGAGGSGFYITADDGGDEASQGSAE
Ga0066709_1024546591	3300009137	Grasslands Soil	LFGFEVGRRKAIVVIAFDGVADGFAPAVGAEGVDIFVLGDVDGLHKSLGQVGDGAGRPGFYIAADHGGDEARQGGAEIAGGEIVAREE
Ga0099792_100595491	3300009143	Vadose Zone Soil	LGFGVGREAVVVVGLDGIADGLAPGVRAEGVDVFVFGEVNGLHESLDQVGDGVGGFGFYIVAHNGGDEACQGGAEIAGGEVVAGEEVGQVFAE
Ga0137392_100259895	3300011269	Vadose Zone Soil	VVVVDGIADGLAPGVGAEGVDVFVLGEVDGLHESLGQVGDGAGGSGFYVTAEDGGDEACQGGTEIAGGEVATGEEIG*
Ga0137392_101545122	3300011269	Vadose Zone Soil	LFGSGGWREEVVVVVVNGIADGLAPGVGAKGVDVFVLGEVDGLHGSLRQVGDGAGGSGFDVAAEDGGDEASQGGAEIAGREVVAGEEVGQVFAERLRGAGASFFLGVVE
Ga0137392_101614443	3300011269	Vadose Zone Soil	VSYRRYRCGLGLRLERLGRLGLGGGREEVVAIAVDGVADGFAPAVGAESVDVFVLREVDGLHESLGQVGDGVGGFGFYIAADNGGDEACQGGAEIAGGEVVTGEEVVQ
Ga0137392_102752681	3300011269	Vadose Zone Soil	VRSGRFGLGVGWEAVVVVVVDGVADGFAPAVRAERVDVLVLGEVDGLHESLGQVGDGVGGFGFYIAADNGGDEACQG
Ga0137392_104372893	3300011269	Vadose Zone Soil	VVAVDGVADGFAPGIGAEGLTIFVLGDVDGLHESLGQVGDGVGGLGFYIAADNGGDEASQGGAEVAGGEVVAGEEVGQVFAKGC*
Ga0137392_106860451	3300011269	Vadose Zone Soil	LERFGSGVGREAVVVVAFDRVADGFAPAVHAEGVDVFVLGDVDGLQEGLRHVGDGAGDFGLYVAADNGGDETCQGGAEIAGGEVVAGEE
Ga0137392_106891371	3300011269	Vadose Zone Soil	VVDGVADGFAPAVGVEGVDVFVLGEVDGLQESLHQVGDGVGGFGFYIAADDGGDEACQGGAEIAGGEVVAGE
Ga0137392_108906682	3300011269	Vadose Zone Soil	LGFGVGREEVVVVVVDGIADGFAPAVGAEGVGVFVLGDVDGLHESLGQVGDGVGGFGLYIAADNGGDEACQGGAEIAGGEVVAGEEVGQVFA
Ga0137392_109131441	3300011269	Vadose Zone Soil	VSYRCYRCGLRLRLRLERLGRLGFGGGREKVVAIAVDGVADGFAPAVRAERVDVFLLGDMDGLHESLGQVGDGVGGFGFYIAADNGGDEACQGG
Ga0137392_114698101	3300011269	Vadose Zone Soil	LGFGIGVGFGGGRKEVVVVAVDGVADGFAPAVRTERVDVFVLGDVDGLHESLDQIGDGVGGFGFYIAADNGGDEACQGGAKITGG
Ga0137391_100143981	3300011270	Vadose Zone Soil	VSYRCYRCGLRLRLRLERLGRLGFGGGREKVVAIAVDGVADGFAPAVRAERVDVFLLGDMDGLHESLGQVGDGVGGFGFYIAADNGGDEACQGGAEIAGG
Ga0137393_100738874	3300011271	Vadose Zone Soil	LGVGREEVVVVAVDGVADGLAPGIGAEGLAIFVLGDLDGLHEGLGQIGDGVGSFGFYIAADNGEDEAAQGGAEIAGGEVVAGEEVGQVFAEFFCGAVPGFFLGVVEA*
Ga0137393_105354641	3300011271	Vadose Zone Soil	MNSGVSYSSGLRLGWCGLFGFGVGREAVVVVGLDGNADGFAPAVRAEGVDVFVLGDVDGLHESLDQVGDGVGGFGFYIAADNGGDEACQGGAEIAG
Ga0137393_106693801	3300011271	Vadose Zone Soil	LGFGVGREAVVVVGLDGIADGLAPGVRAEGIDVFVFGEVNGLHESLDHIGDSVGGFGFYLAADNGGDEACQGGAEIAGGEVVAGEEVGQV
Ga0137393_108800291	3300011271	Vadose Zone Soil	VSYRCYRCGLRLRLRLERLGRLGFGGGREKVVAIAVDGVADGFAPAVGAESVDVFVLREVDGLHESLGQVGDGVGGFGFYIAADNGGDEACQGGAEIAGGEVVAGEEV
Ga0137389_106733121	3300012096	Vadose Zone Soil	LGLGLWLGGLGLRLGGFGLFGFGREEVGVVAVDRVADGFAPVVGAESVDVFVLGDVDGLHESLDQVGNGVGGFGFYIAADNGGDEARQSGAEL
Ga0137388_113999141	3300012189	Vadose Zone Soil	VRSGRFGLGVGWEAVVVVVVDGVADGFAPAVRAERVDVLVLGEVDGLHESLGQVGDGVGGFGFYIAADNGGDEACQGGAEIAGGEVVAGEEVG
Ga0137383_109651601	3300012199	Vadose Zone Soil	VGREAVVVVAFNGIADGFAPVIGVEGLAIFVLGNVDGLHERLDQVGDGVGGFGLHIAADNGGDEACQGGAEIAGGKVVAGEEIGYVF
Ga0137363_101885722	3300012202	Vadose Zone Soil	GVGREEVVVVAVDGVADGLAPGIGAEGLAIFVLGDVDGLHEGLGQIGDGVGSFVFYIAADNGGDEAAQGGAEIAGGEVVAGEEVSQVFAEFFCGAVPGFFLGVVEA*
Ga0137363_102170291	3300012202	Vadose Zone Soil	VVDGVADGFAPAVGVEGVDVFVLGEVDGLQESLHQVGDGVGGFGFYIAADDGGDEACQGGAEIAGGEVVAGEEVGQVFAEFFCGAGPGFF
Ga0137363_107313741	3300012202	Vadose Zone Soil	LDVLRLRLRGMRLRRFGFRGGREEVVVVAFDGIADGLAPVVGAKGVGVLVLGEVDGLHESLGQVSDGAGGSGFYIAADDGGDEMPQGGAEIAGREIVAGEEVGQVFAE*
Ga0137362_103667311	3300012205	Vadose Zone Soil	LGVGREEVVVVAVDGVADGLAPGIGAEGLAIFVLGDVDGLHEGLGQIGDGVGSFGFYIAADNGGDEAAQGGAEIAGGEVVAGEEV
Ga0137362_105501241	3300012205	Vadose Zone Soil	VVDGVADGFAPAVGVEGVDVFVLGEVDGLQESLHQVGDGVGGFGFYIAADDGGDEACQGGAEIAGGEVVAGEEVA*
Ga0137362_107436671	3300012205	Vadose Zone Soil	LDVLRLRLRGMRLRRFGFRGGREEVVVVAFDGIADGLAPVVGAKGVGVLVLGEVDGLHESLGQVSDGAGGSGFYIAADDGGDETPQGGGEIAGREIVAGEEVGQVFAE*
Ga0137362_108520001	3300012205	Vadose Zone Soil	LGVGREEVLVAALDGVADGFAPAVPAESVDVFVLGDVDGLHESLDQVGDGVGGFGLYIAADNGGDEACQGGAEIAGGEVVAGEEVGQVFAE
Ga0137362_115706871	3300012205	Vadose Zone Soil	LIRRQFGCRVGREAIVVVGVDGIADGFAPAARAEGVDVFLLGNVDGLHESLCQVGDGVGGFGFYIAADNGGDEARQGGAEIAGGEVV
Ga0137381_102817802	3300012207	Vadose Zone Soil	MRKAIVVVVVDGIADGFAPAVRAEGVDVFVLGDVDGLHQSLDQIGDGVCGFGFYIAADNGGDETCHRGAEIAGREVVAGEEVG*
Ga0137381_104742592	3300012207	Vadose Zone Soil	LGGFGGEREAVVVVAVDGVADGLAPDIGAEGLTIFVLGEVDGLHESLDQIGDGVGGFGFYIAADNGGDEACQGSAEIAGGEIVAGEEVG*
Ga0137381_113218502	3300012207	Vadose Zone Soil	LGGGREAVIVVAVDGIADGLAPGIGAEGLTIFVLGDVDGLHESLNQVGDGVGGFGFHIAADHGGDEACQGGAEIAGGEVVAGEEV
Ga0137379_104205611	3300012209	Vadose Zone Soil	VGREAVVVVAFNGIADGFAPVIGVEGLTIFVLGNVDGLHERLDQVGDGVGGFGLHIAADNGGDEACQGGAEIASGKVIAGEEEGEVFAECFGG
Ga0137378_102574361	3300012210	Vadose Zone Soil	LGGFGGEREAVVVVAVDGVADGFAPDIGAEGLTIFVLGEVDGLHESLHQIGDGVGGFGFYIAADNGGDEARQGSAEIAGREVVAGEEVA*
Ga0137378_104708901	3300012210	Vadose Zone Soil	VGREAVVVVAFNGIADGFAPVIGVEGLAIFVLGNVDGLHERLDQVGDGVGGFGLHIAADNGGDAACPGGVELASGKVIAGEEEGG
Ga0137378_110128551	3300012210	Vadose Zone Soil	LGLFGCGGGREAVVVVAVDGIADGLAPGIGAEGLTIFVLGDVNGLHESLHQVGDGVGGFGFYITADNGGDEACQGGAEIAGGEV
Ga0137386_101721061	3300012351	Vadose Zone Soil	LGGFGVGREAVVVVAVDGAADGFAPGIRAEGLTIFVLGDVDGLHKSLDQVGDGMGGFWFYIAADNGGDEARQGSAEIAGREVVAGEE
Ga0137360_100085176	3300012361	Vadose Zone Soil	VVAVDGVADGLAPGIGAEGLAIFVLGDVDGLHEGLGQIGDGVGSFVFYIAADNGGDEAAQGGAEIAGGEVVAGEEVSQVFAEFFCGAVPGFFLGVVEA*
Ga0137360_101118461	3300012361	Vadose Zone Soil	MRWRGGGRLLRLEGSRLFVFGFGREEVVVVGVDGIADGFAPAVRVEGVDVFVLGDVDGLQESLGQIGDGSGGFGFYIAADYGGDEACQGGAEIAGGEVVAGEEVGQVFAEFFCGAGPG
Ga0137360_102173512	3300012361	Vadose Zone Soil	MGSLIRGRFGCGVGREEVLVVALDGVADGFAPAVGAEGVDVFVLGDVDGLHKSLDQVGDGVGGFGLYIAADNGGDEACQGGAEIAGGEVVAGEEVG*
Ga0137361_106313391	3300012362	Vadose Zone Soil	LGLGLWLGVLGLRLEWRGLFGGGDGRKAVVVVAVDGIADGFAPAVGAEGVGVFVLGDVDGLHESLGQVGDGVGGFGLYIAADNGGDEACQGGAEIAGGEVVAGEEVGQVFAEFLCGAGSGFFLGVV
Ga0137390_100302845	3300012363	Vadose Zone Soil	VVAVDGVADGFAPGVGAESVDVFVLGEVDGLHESLDQVGDGVGGFGFYIAAEDGGDEACQGGAEIAGGEVVAGEEVG*
Ga0137390_110541301	3300012363	Vadose Zone Soil	VSYTYSGGLGWFGLFGFGVGREEVVVVAVDGVADGFAPAVRAEGVDVFVLGDVDGLHESLDQVGDGVGGFGFYIAADNGGDEACQGGAE
Ga0137358_101063942	3300012582	Vadose Zone Soil	LGVGREEVVVVAVDGVADGLAPGIGAEGLAIFVLGDVDGLHEGLGQIGDGVGSFGFYIAADNGGDEAAQGGAEIAGGEVVAGEEVGQVFAEFFCGAVPGFFLGVVEA*
Ga0137358_110208421	3300012582	Vadose Zone Soil	RWRGGGRLLRLEGSRLFVFGFGREEVVVVGVDGIADGFAPAVRVEGVDVFVLGDVDGLQESLGQIGDGSGGFGFYIAADYGGDEACQGGAEIAGGEVVAGEEVARSLPSFSAARARASFWAW*
Ga0137395_106876221	3300012917	Vadose Zone Soil	VVFVDGVADGFAPIVGVEGLTIFVLGDVDGLQESLGQVGDGAGGLGFYIAADNGGDKAAQGGTEIAGGE
Ga0137396_103503611	3300012918	Vadose Zone Soil	MGVGREEVVVVAIDGVADGAAPAFRAEGVDVFVLGEVDGLHESLGQVSDGVGGFGLYIAADNGGDEAAQGGTEVASGEVVA
Ga0137419_101861231	3300012925	Vadose Zone Soil	LGFGVGREEVVVIAVDGVAPAVGAEGVDVFVLGAVDGLHESLGHVGDGVSGFGFHIAADNGGDETCQGGAEIAGGEVVAREEVGQVFAEFSCGAGSGFFLGVVE
Ga0137419_102141122	3300012925	Vadose Zone Soil	LGFGVGREEVVAVAIDGGADGIAPAVGAEGADVFVLGEVDGLHESLGQVGDGVSGFGFYIATDDSGDEAAQGGAEVASGEVVAGEE*
Ga0137404_102726621	3300012929	Vadose Zone Soil	MRLRRFGRCGCGGRREEVVLVVFDGIADGFAPAVGAESVDVFVLGDVDSLHESLDQVGDGVSGFGFHIAADNGGDETAQGSAEIAGGEVVAGKEVGQVFAE
Ga0137407_100203051	3300012930	Vadose Zone Soil	LWLLGFGFGREEVVVVVVDGIADGFAPAVRVEGVDVFVLGDVDGLHESLCQVGDSAGGSGFYIAADNGGDEACQSGAEIAGGEVVAGEE
Ga0137407_100931661	3300012930	Vadose Zone Soil	MRWRGGGGLLRLEGSRLFVFGFGREEVVVVGVDGIADGFAPAVRVEGVDVFVLGDVDGLQESLGQIGDGSGGFGFYIAADYGGDEACQGGAEIAGGEVVAGEEVGQVFAEFFCGAGAGFF
Ga0137418_110470521	3300015241	Vadose Zone Soil	LGGGREEVLVVAVDGVSDGFAPAVVAEGVAVFLLGDVDGLQESLHQVGDGVSGFGFHIAADNGGDETCQGGAEIAGGEVV
Ga0137403_1000721412	3300015264	Vadose Zone Soil	MRLRRFGRCGCGGRREEVVLVVFDGIADGFAPAVGAESVDVFVLGDVDSLHESLDQVGDGVSGFGFHIAADNGGDETAQGSAEIAGGEVVAGKEVGQVFAERFCGACAGFFLGVVETE
Ga0066655_108548151	3300018431	Grasslands Soil	LFGFGGEREAIVVITFDGIADGFAPAVGAEGVDVFVLGDVEGLHESLGEVGDGASSSGFYIAADNGGDEARQGSAEIAGGEVVAGEEVGQVLAEVLRGAGAGLFLGV
Ga0179592_101194041	3300020199	Vadose Zone Soil	LGLGGGPEAVGVVFVDGVADGFAPIVGVEGLTIFVVGDMDGLQESLGQVGDGAGGLGFYIAADNGGDKAAQGGTEIAGGELVAG
Ga0210403_102061873	3300020580	Soil	LRFGLGVAGCGWEAVVIVDVDGGADGFAPAVGAEGVDIFVLGEVDGLQLSLDHVGNGARESGFYIAADYGGDEACEGSVEIAGGEVVAGEEGGEVFGE
Ga0210395_103653922	3300020582	Soil	LRFGFGVAGGGWEAVVVVDVDGGADGFAPAVGAEGVDIFVLGDVDGLQLSLDHVGNGAGESGFYLAADYGGDEASEGGVEIAGGEVIAGEEGGEVFGE
Ga0179596_106165691	3300021086	Vadose Zone Soil	LGLGGGPEAVGVVFVDGVADGFAPIVGVEGLTIFVLGDMDGLQESLGQVGDGAGGLGFYIAADNGGDKAAQGGTEIAGGELVAGKEVGQVFAEFLCGAGAGFFLGVVRAEAG
Ga0210406_108592971	3300021168	Soil	LGRCLGLRVGALGLRCFGLLRFGFGIAGGGWEAVVVVDVDGGADGFAPAVGAEGVDVFVLGDVDSLQLGLDHVGDGAGESGFYVAADYGGDEASEGGVEIAGGEVIAGEEV
Ga0210405_100854174	3300021171	Soil	VVVVGIYGGADCFAPAVGAKCVDVFVLGDVDGLQLGLEHVGDGAGESGFYIAADHGGDEPGEGSVEIAGGKIVAGEEAREVFGE
Ga0210388_100985221	3300021181	Soil	LLRFGFGIAGGGWEAVVVVDVDGGADGFAPAVGAEGVDIFVLGEVDGLQLSLDHVGNGARESGFYIAADYGGDEAGEGSVEIAGGEVVAGEEGGEVFGE
Ga0210402_106879312	3300021478	Soil	LVGVDGVADGLAPTFGAEGVDVFVLGDVNGLQESLEEVGDGAGGFGFYIAADNGRDEAGKGGAEIAGGEVVAGEEVGQVFAEILC
Ga0210410_113051261	3300021479	Soil	LRFGLGGVGGGWEAVVIVDVDGGADGFAPAVGAEGVDIFVLGDVDGLQLSLDHVGNGAGESGFYLAADYGGDEPGEGSVEIAG
Ga0212123_1000569417	3300022557	Iron-Sulfur Acid Spring	MRLGLLRFGFGVVADIVVGVGREEIVAVAVDGVADGFAPAVAAEGVDVFVLGEVDGLQLGLEHVSDGAGEFGFYFAADYGGDESREGGAEIASGEVIAREK
Ga0212123_100647782	3300022557	Iron-Sulfur Acid Spring	VVAVDGGADGFAPAVSAEGVDVFVLGEADGLRQGLEHVGDGAGEFGFYFAADDGRDEACEGGAEIAGGKVVAGEEVGEVFA
Ga0209235_10581403	3300026296	Grasslands Soil	MGSRGEAVVVVAVDGVADGFPPAAGVEGVDVFVLGDVDGLQESLGHVGDGAGDLGFYIAADYGGDEAAQGGAEIAGGEVVAGEVVG
Ga0209378_10238664	3300026528	Soil	MTIHGRWGGVGLLGLVGFGGGRVEVVGVAFDGIADGLAPAVGAESVDVFVLRDVDGLHESLGQVGNGAGGSGFYIATDDGGNEACQGGA
Ga0179593_11541261	3300026555	Vadose Zone Soil	LGGGREAVGVVFVDGVADGFAPIVGVEGLTIFVVGDMDGLQESLGQVGDGAGGLGFYIAADNGGDKAAQGGTEIAGGELVAGKK
Ga0208098_10245741	3300027172	Forest Soil	LGRWLGLWVDAPGLGWFGLLRFGFGVAGGGWEAVVVVDVDGGADGFAPAVGAEGVDIFVLGEVDGLQLSLDHVGNGARESGFYIAADYGGDEAGEGSVEIAGGEVVAGEEGGEVFGE
Ga0209588_10994812	3300027671	Vadose Zone Soil	LGLWLGGARSLTPPDQVGINSGVSYSGGLRLGRFAPQIRPERRKRGLFGFGVGREEVVAVAVDGVADGFAPAVRAEGVDVFVLGEVNGLHESLGQVGDGVGGFGFYIAADNG
Ga0209448_100354603	3300027783	Bog Forest Soil	LRFGGGWKAVVVVGVYGGADGFAPAVGAEGVDVFMLGDVDGLQLGLEHIGDGAGESGLYIAADYGGDEAGHGSAEVARGKIVAGEEAGQVFGE
Ga0209701_101709013	3300027862	Vadose Zone Soil	LRLGRFGLFAFGVGWEDVVVVAVDGVADGFAPVVGVEGVDVFLLGDVDGLQEGLGQVGDGAGGSGFYIAADNCGDEPCQSGAE
Ga0209590_103768411	3300027882	Vadose Zone Soil	VVVVDGIADGFAPAVGAEGVGVFVLGDVDGLHESLDQVGDGAGGFGFYIAADNGGDEACQGGAEIAGGEVVAGEEVG
Ga0137415_101406311	3300028536	Vadose Zone Soil	VVAVDGVSDGFAPAVVAEGVGVFLLGDVDGLKESLHQVGDGVSGFGFHIAADNGGDETCQGGAEIAGGEVVAGEEVGQVFAERFCGAGAGFFLGVVEAEVGMVAVARS
Ga0222749_108253261	3300029636	Soil	LLRFGLGVAGCGWEAVVIVDVDGGADGFAPAVGAEGVDIFVLGEVDGLQLSLDHVGNGARESGFYIAADYGGDEAGEGSVEIAGGEVVAGEEGGEVFGE
Ga0307474_105541521	3300031718	Hardwood Forest Soil	LWGLRLRPPGMRLRGRGVFGFGGGWEAVVVVVVDGVEDGIAPGIGAEGLAVFVPGDVDGLQESLHQVGDGVGSFGFYIAADDGGDEACQGGA
Ga0307479_101912751	3300031962	Hardwood Forest Soil	HSWSAGVRIWCFGFGGGREAVVVVASDGIADGLAPVVGAKGVGVLVLGEVDSLHEGLAQVGDSAGGSGFYVAAEDGGDEASQGGAEIAGREVVAGEEVGQVFAN
Ga0307471_1003348161	3300032180	Hardwood Forest Soil	VVVVAVDGVADGFAPAVRAERVDVLVLGDVDGLQEGLRHVGDGAGDFGLYIAADNGGDEAAQGGAEIAGGEVAAGEEVGQVFAERF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097749

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences