Metagenome / Metatranscriptome Family F097740

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F097740
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	92 residues
Representative Sequence	MRLKSLLSACLLVSSICAGAQTTVSIAPDAASKEDVKKLFDVMASREQIGQMMQQVFAQMRSMNREQVKKRRPDVTEEELARMDRES
Number of Associated Samples	88
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.19 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	88.46 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (53.846 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (18.269 % of family members)
Environment Ontology (ENVO)	Unclassified (33.654 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.154 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 58.26% β-sheet: 0.00% Coil/Unstructured: 41.74%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00113	Enolase_C	54.81
PF03952	Enolase_N	21.15
PF01850	PIN	3.85
PF09832	DUF2059	3.85
PF00149	Metallophos	2.88
PF02604	PhdYeFM_antitox	1.92
PF07927	HicA_toxin	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0148	Enolase	Carbohydrate transport and metabolism [G]	75.96
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.92
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.92
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.85 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.85 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.85 %
Unclassified	root	N/A	46.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.42 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	12.50 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	14.42 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	12.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14.42 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	12.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	12.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.65 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.77 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.15 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	12.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8.65 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10201696	Not Available	679	Open in IMG/M
3300001166\|JGI12694J13545_1010805	Not Available	988	Open in IMG/M
3300001593\|JGI12635J15846_10116990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1888	Open in IMG/M
3300003368\|JGI26340J50214_10143898	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	598	Open in IMG/M
3300004091\|Ga0062387_100370765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	953	Open in IMG/M
3300004091\|Ga0062387_100575415	All Organisms → cellular organisms → Bacteria → Acidobacteria	802	Open in IMG/M
3300004152\|Ga0062386_100704405	Not Available	829	Open in IMG/M
3300004635\|Ga0062388_102366209	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300005591\|Ga0070761_10839508	Not Available	579	Open in IMG/M
3300005610\|Ga0070763_10688944	Not Available	598	Open in IMG/M
3300005921\|Ga0070766_10021122	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3462	Open in IMG/M
3300006052\|Ga0075029_101054513	Not Available	563	Open in IMG/M
3300006176\|Ga0070765_100114907	All Organisms → cellular organisms → Bacteria	2351	Open in IMG/M
3300006176\|Ga0070765_102009142	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300009090\|Ga0099827_11795091	Not Available	535	Open in IMG/M
3300009522\|Ga0116218_1007272	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5045	Open in IMG/M
3300009523\|Ga0116221_1276463	Not Available	726	Open in IMG/M
3300009552\|Ga0116138_1085846	Not Available	878	Open in IMG/M
3300009623\|Ga0116133_1090499	Not Available	773	Open in IMG/M
3300009624\|Ga0116105_1037791	Not Available	1071	Open in IMG/M
3300009700\|Ga0116217_10850634	Not Available	561	Open in IMG/M
3300009762\|Ga0116130_1058238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1218	Open in IMG/M
3300010343\|Ga0074044_10087984	All Organisms → cellular organisms → Bacteria → Acidobacteria	2095	Open in IMG/M
3300010401\|Ga0134121_13175546	Not Available	507	Open in IMG/M
3300012201\|Ga0137365_10334316	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1120	Open in IMG/M
3300012683\|Ga0137398_11099000	Not Available	547	Open in IMG/M
3300017822\|Ga0187802_10357995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300017946\|Ga0187879_10874604	Not Available	503	Open in IMG/M
3300017948\|Ga0187847_10476706	Not Available	690	Open in IMG/M
3300017970\|Ga0187783_11253068	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300017975\|Ga0187782_10892438	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300018023\|Ga0187889_10509719	Not Available	512	Open in IMG/M
3300018047\|Ga0187859_10621284	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	610	Open in IMG/M
3300019241\|Ga0187793_1118045	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300020579\|Ga0210407_11044868	Not Available	621	Open in IMG/M
3300020579\|Ga0210407_11446568	Not Available	508	Open in IMG/M
3300020580\|Ga0210403_10281341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1364	Open in IMG/M
3300020581\|Ga0210399_11137134	Not Available	623	Open in IMG/M
3300020581\|Ga0210399_11327733	Not Available	565	Open in IMG/M
3300020582\|Ga0210395_11061796	Not Available	598	Open in IMG/M
3300021088\|Ga0210404_10896811	Not Available	507	Open in IMG/M
3300021171\|Ga0210405_10140760	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300021405\|Ga0210387_10545198	Not Available	1031	Open in IMG/M
3300021420\|Ga0210394_10296661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1418	Open in IMG/M
3300021420\|Ga0210394_10372315	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1256	Open in IMG/M
3300021432\|Ga0210384_10527698	All Organisms → cellular organisms → Bacteria → Acidobacteria	1062	Open in IMG/M
3300021474\|Ga0210390_11394835	Not Available	558	Open in IMG/M
3300021477\|Ga0210398_10767606	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300021477\|Ga0210398_11164023	Not Available	610	Open in IMG/M
3300021479\|Ga0210410_10054855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3476	Open in IMG/M
3300021559\|Ga0210409_10737081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	857	Open in IMG/M
3300022733\|Ga0224562_1000978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1924	Open in IMG/M
3300023012\|Ga0228597_106013	Not Available	674	Open in IMG/M
3300023019\|Ga0224560_105289	Not Available	810	Open in IMG/M
3300023090\|Ga0224558_1076774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1239	Open in IMG/M
3300024227\|Ga0228598_1018461	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1375	Open in IMG/M
3300025442\|Ga0208034_1088503	Not Available	542	Open in IMG/M
3300027080\|Ga0208237_1027262	Not Available	862	Open in IMG/M
3300027497\|Ga0208199_1093903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300027625\|Ga0208044_1214315	Not Available	510	Open in IMG/M
3300027696\|Ga0208696_1092951	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1007	Open in IMG/M
3300027768\|Ga0209772_10098572	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300027812\|Ga0209656_10311432	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	725	Open in IMG/M
3300027825\|Ga0209039_10217529	Not Available	772	Open in IMG/M
3300027829\|Ga0209773_10028840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2197	Open in IMG/M
3300027854\|Ga0209517_10585071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300027855\|Ga0209693_10284161	Not Available	808	Open in IMG/M
3300027855\|Ga0209693_10502807	Not Available	579	Open in IMG/M
3300027889\|Ga0209380_10051007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2347	Open in IMG/M
3300028795\|Ga0302227_10054936	All Organisms → cellular organisms → Bacteria → Acidobacteria	1810	Open in IMG/M
3300028795\|Ga0302227_10257837	Not Available	666	Open in IMG/M
3300028798\|Ga0302222_10012296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3520	Open in IMG/M
3300028806\|Ga0302221_10533285	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300028863\|Ga0302218_10049185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1326	Open in IMG/M
3300028863\|Ga0302218_10238265	Not Available	584	Open in IMG/M
3300028906\|Ga0308309_10267020	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1437	Open in IMG/M
3300028906\|Ga0308309_10518678	All Organisms → cellular organisms → Bacteria	1031	Open in IMG/M
3300029917\|Ga0311326_10534268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300029943\|Ga0311340_10132863	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300029944\|Ga0311352_10711212	Not Available	792	Open in IMG/M
3300029951\|Ga0311371_10063661	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6135	Open in IMG/M
3300029956\|Ga0302150_10186976	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300029999\|Ga0311339_10826759	Not Available	888	Open in IMG/M
3300030043\|Ga0302306_10037021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1958	Open in IMG/M
3300030524\|Ga0311357_10204414	All Organisms → cellular organisms → Bacteria → Acidobacteria	1928	Open in IMG/M
3300030524\|Ga0311357_10510558	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1118	Open in IMG/M
3300030524\|Ga0311357_10879737	Not Available	798	Open in IMG/M
3300030580\|Ga0311355_11149944	Not Available	688	Open in IMG/M
3300030618\|Ga0311354_10101019	All Organisms → cellular organisms → Bacteria	3221	Open in IMG/M
3300030687\|Ga0302309_10097759	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1584	Open in IMG/M
3300030737\|Ga0302310_10433700	Not Available	714	Open in IMG/M
3300031090\|Ga0265760_10101078	Not Available	911	Open in IMG/M
3300031258\|Ga0302318_10689495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300031474\|Ga0170818_102223085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	912	Open in IMG/M
3300031708\|Ga0310686_100398932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5682	Open in IMG/M
3300031708\|Ga0310686_101891310	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300031708\|Ga0310686_103159107	Not Available	685	Open in IMG/M
3300031708\|Ga0310686_114122612	Not Available	521	Open in IMG/M
3300031715\|Ga0307476_11212680	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300031718\|Ga0307474_10502589	Not Available	951	Open in IMG/M
3300031823\|Ga0307478_10537142	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	976	Open in IMG/M
3300031823\|Ga0307478_11490868	Not Available	560	Open in IMG/M
3300031837\|Ga0302315_10473043	Not Available	685	Open in IMG/M
3300032515\|Ga0348332_12451879	Not Available	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.04%
Host-Associated	Host-Associated	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.81%
Aquatic	Environmental → Aquatic	19.23%
Plants	Host-Associated → Plants	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.77%
Peat	Environmental → Terrestrial → Peat	22.12%
Freshwater	Environmental → Aquatic → Freshwater	18.27%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.92%
Sediment	Environmental → Aquatic → Sediment	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	22.12%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.27%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	22.12%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	21.15%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.50%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	18.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.35%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.62%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	8.65%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.69%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001166	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009624	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300019241	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022733	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU3	Environmental	Open in IMG/M
3300023012	Spruce litter microbial communities from Bohemian Forest, Czech Republic - CLU4	Environmental	Open in IMG/M
3300023019	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027497	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027768	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300028795	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N1_1	Environmental	Open in IMG/M
3300028798	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029956	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_2	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030524	II_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030687	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_1	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_102016962	3300000567	Peatlands Soil	MRLKLFLPVCFLALSMCAGAQTTVSIAPDAASREDVKKLFDVMASREQIGQMMQQVFAQMRSLNREQIKKRRPGVTEDELARMDRES
JGI12694J13545_10108051	3300001166	Forest Soil	MTLKSFLCAGLIAFSMCAGAQTTVSIAPDAASKEDVKKLFDVMASREQMDKTMRQVFAQMQSLNREEMKKRRP
JGI12635J15846_101169902	3300001593	Forest Soil	MRLKSLLGACVLALSMCAGAPATLAQTTVSIATDAASREDVQKLFDVMASREQMAQMMQKVFAQMRTLNRDEIKKRHPDITAQQLASMDQQSEE
JGI26340J50214_101438982	3300003368	Bog Forest Soil	MNLRSVLLVCLLALSICAGAQTTVSIAPDAPSKEDVKKLFDVMASREQMSQMMHQVFAQMRSMNREQLKKNNPDMSEADLARMDRE
Ga0062387_1003707651	3300004091	Bog Forest Soil	MRRTSWLCVCLLALSLCAGAQTTVSVAPDAASKEDVQKLFDVMASRQQITQMMQQLFAQMRSMNREQLKKRHPDV
Ga0062387_1005754151	3300004091	Bog Forest Soil	MRRTSWLCAGLLALSLCAGAQTTVSVAPDAASKEDVRKLFDVMASREQMAQVMQQVFAQMRKLNREQLKKRHPDVTESDLSRMDHESEDLIKNF
Ga0062386_1007044052	3300004152	Bog Forest Soil	MRLKSTLCACLLALSLCAGAQTTVSIAPDAASKEDVRKLFDVMASRDQMRQIMQQVFAQMQNMNREQLKKRHPDVTDADLARLDRQSEDLLKNFPLDEM
Ga0062388_1023662091	3300004635	Bog Forest Soil	VRSTLLPLIGLLLASMCAAQTTVSVAPDAASKEDIKKLFDVMLSRDQMTQMMQQLFTQMQNMSREQLKKKHPDITDSELASMDHESQDLIKHFPLEQMLDDMVPVYQKHFTKS
Ga0070761_108395081	3300005591	Soil	MKFKSLLAASFLVLSLCAGAQTTVSIAPDAASKEDVQKLFDVMASREQMAQMMQQVFAQARTLNRDEIKKRHPDITAA
Ga0070763_106889442	3300005610	Soil	MRLKSLLGVCVLALCMCAGAPITLAQTTVSIAPDAASREDVQKLFDVMASREQMAQMMQKVFAQARTLNRDEIKKRHPDITADQLA
Ga0070766_100211224	3300005921	Soil	MKMRLVLSACFVALSLGAGAQTTVSIAPDAASKEDVKKLFDVMASREQMSQLMQQVFAQMRKMNREEIKKRRPEITE
Ga0075029_1010545132	3300006052	Watersheds	MRLKSSLRVCFLALSVCAAAQTTVSIAPDTASKEDVQKLFDVMASRQQMTQMMQQLFAQMRSMNREQFKKKNPDV
Ga0070765_1001149075	3300006176	Soil	MRLRSWLCAPLLVALSLCAGAQTTVSVAPDAASKEDVKKLFDVMASRQQMAQMMQQLFGQMRTMNRAELKKRHPDVTDADLASMDR
Ga0070765_1020091422	3300006176	Soil	MKWKFLLSACFLAVSLCAGAQTTVSIAPDAASKEDVKKLFDIMASRDQMANMMKQVFAQMQTMNREQLKKNHPDLTDADLAGMDRRSDEFLKSFPLDEMLNDMIPIYQKHFTK
Ga0099827_117950911	3300009090	Vadose Zone Soil	MSAGAQTTVSIAPGAASKEDVKKLFDVMASREQMSQMMQQLFAQMRSLNREQIKKRRPEVTEAELARM
Ga0116218_10072726	3300009522	Peatlands Soil	MRRTSWLCAGLVALSLCAGAQTAVSVAQDAASKEDVKKLFDVMASREQMAQVMQQVFAQMRKLNREQLKKRHP
Ga0116221_12764631	3300009523	Peatlands Soil	MRLKLFLPVCFLALSMCAGAQTTVSIAPDAASREDVKKLFDVMASREQIGQMMQEVFAQMPSLNREQITKRRPGVTEDELARMDRESEDLIKTFPLDEMLHDMIPIYQKHF
Ga0116138_10858461	3300009552	Peatland	MKMRLLLSACLLAFSLSAAAQTTVSIAPDAASREDVKKLFDVMASRQQMSQLMQQVFAQMRKMNREEIKKRRPEITEADLT
Ga0116133_10904992	3300009623	Peatland	MKWKFLLSACLLAVSLSAEAQTTVSIPPDAASKEDVKKLFDVMASRNQMANMMQQVFAQMQTMNRDQLKKNHPE
Ga0116105_10377911	3300009624	Peatland	MKWKFLLSACLLAVSLSAEAQTTVSIPPDAASKEDVKKLFDVMASRNQMANMMQQVFAQMQTMNRDQLKKNHPELTDADLAGMDRRSDEFLKNFPLDEMLNDM
Ga0116217_108506342	3300009700	Peatlands Soil	MKLESILCACLLGLSMGAGAQTTVPVAPDAASREDVKKLFDVMASREQMAQMMQQVYAQMRRMNRDELKKKHPDVTEAELASMDRRS
Ga0116130_10582381	3300009762	Peatland	MKMRLLLSACLLAFSLSAAAQTTVSIAPDAASREDVKKLFDVMASRQQMSQLMQQVFAQMRKMNREEIKKRRPEITEADLTRMDQQSEDLIKN
Ga0074044_100879841	3300010343	Bog Forest Soil	MSAAAQTTVSIAPDAPSREDVKKLFDVMASREQMTQMMQQLFAQIRAMNREQMKKRRPDITDAELASVDQQSQDLIKNFPLDEMLNDMVPVYQRHFTKSDIEALTA
Ga0134121_131755462	3300010401	Terrestrial Soil	MTLKSLLCAGVLSLSLAAAAQTTVSVAPDAASKEDVKKLFDVMTNRDQMTQLLQQLFAQMRSMSREQLKKRRPDLTDADFARMDRDSEDLIKHFPMEEMLNEMIPVYQRHFTKSEVE
Ga0137365_103343162	3300012201	Vadose Zone Soil	MRLKLWLWACFLALSVCAGAQTTVSIAPDAASKEDVKKLFDVMTSRDQMAQLLQQLFAQMRSLNREQLKKKRPDLTDADLARMDRESEDLIKHFLLEEMLNDMIPVYQKH
Ga0137398_110990001	3300012683	Vadose Zone Soil	MCAGAQTTVSTAPDAASRDDVKKLFDVMASREQMAQMMQQLFAQMQSLSREQVKKRHPDVTEADLARMAKFLKMPAADFE
Ga0187802_103579952	3300017822	Freshwater Sediment	MKLQSFLCACLLTLSLSATAQTTVSIAPDAPSREDVKKLFDVMASREQMTQMMQQLFAQMRAMNREQMKKRRPDITDAELASVDQQSQDLIKNFPLDEMLNDMVPVYQRHFT
Ga0187879_108746042	3300017946	Peatland	MRLQPVLGTCFLALSMCAGAQTTVSIAPDTASKEDVKKLFDVMASRDQMAQMMQQLFAQMRSLNRQEIKKRHPDVSEDELARMDRQSEELVKNFPLD
Ga0187847_104767061	3300017948	Peatland	MKWKFLLSACLLAVSLSAEAQTTVSIPPDAASKEDVKKLFDVMASRNQMANMMQQVFAQMQTMNRDQLKKNHPELTDADLAGMDRRSDEFLKNFPLDEML
Ga0187783_112530682	3300017970	Tropical Peatland	MRCNLLLPAVLVLVSVCAAQTTVSIAPDAPSKEDVKKLFDVMASREQMQEMMHQMFAQMRALNREQMKKRQPDVSDSELARMDRESEELINNFPLD
Ga0187782_108924382	3300017975	Tropical Peatland	MRCNLVLPVALLLASVCAAQTTVSIAPDAPSKEEVKKLFDVMASREQMKKRQPDVSDSEIARMDRESEELINNFPLDSMVDDMIPIY
Ga0187889_105097191	3300018023	Peatland	MGLKSSLCVCLLALSACAGAQTTVSVAPDAASKEDVRRLFDVMASREQMGQTIRQVFAQMQTLNREEIKKKRPDV
Ga0187859_106212841	3300018047	Peatland	MKMRLVLSTCCLALSLGAGAQTTVAIAPDAASKGDVKKLFDVMASREQMSQLMQQVFAQMRKMNREEIKKRRPEMTEADLTRMDEQSEDLIKNFPLDEMLNDMIPIYQRHFSKSE
Ga0187793_11180453	3300019241	Peatland	MRGKLLLSMSVLVLSTWSLGQVTVSVAPDAPSKEEAQKLFDVMASREQVHQVMQQVFAQMRTLNREEIKKRRPDITDEDLASLERESEDLIKNFPLDEMLADMIPVYQRHFTKSDIA
Ga0210407_110448682	3300020579	Soil	MRMTSILCACLLGLCAGAGAQTTVPISPDAASQEDVKKLFDVMASREQINQMMQQLFAQMQSLNREQLKKKHPELSDADLSRMDRGSQDLIKNFP
Ga0210407_114465682	3300020579	Soil	MRLKSLLPTFLLIASMSVAQTTVSVAPDAASKEDVKRLFDVMASRDQMAQMMQQLFAQMQSLSREEMKKRHPEVTDAELARMDRQSEEL
Ga0210403_102813412	3300020580	Soil	MRLTSILCACLLGLCVGAGAQTTVPISPDAASQEDVKKLFDVMASREQISQMMQQLFAQMQSLNREQLKKKHPELSDADLSRMDRGSQDLI
Ga0210399_111371341	3300020581	Soil	MRLKSLLPTFLLIASMSVAQTTVSVAPDAASKEDVKRLFDVMASRDQVAQMMQQLFAQMQSLSREEMKKRHPEVTDAELARMD
Ga0210399_113277332	3300020581	Soil	MRVKSLLFACFLALSMCGGAQTTISIAPDAASKEDVKKLFDVMASREQMAQMMKQLFAQMRSLNREEIKKRRPEVTEADLARMDRESEDLIKSFPLDEMLKDMIPIY
Ga0210395_110617961	3300020582	Soil	MKMRLVLSACFVALSLGAGAQTTVSIAPDAASKEDVKKLFDVMASREQMSQLMQQVFAQMRKMNREEIKKRRPEITEADLTRMDQQS
Ga0210404_108968112	3300021088	Soil	MRFKLLLCASFLALALSAGAQSAGAQTTVSIAPDAASKEDVKKLFDVMASREQMAQMMKQVFRQMRSLNREEIKKRHPDVTEADLARMDRESEDLLKNFPLDDMLSDM
Ga0210405_101407604	3300021171	Soil	MRPKSWLCAPLLALSLCAGAQTSVSVAPDAASKEDVKKLFDVMASRQQMAQMMQQLFAQMRTMNRAELKKRHPDVTEA
Ga0210387_105451982	3300021405	Soil	MRFKSLLCASILALTLCAGAQTTVSIAPDAASKEDVKKLFDVMASREQMAQMMKQVFTQMRSLNREEIKKRHPDVTEADLARMD
Ga0210394_102966611	3300021420	Soil	MRFKSLLCASFIVLALSAGAQSAGAQTTVSIAPDAASKEDVKKLFDVMASREQMAQMMKQVFTQMRSLNREEIKKRHPDVTE
Ga0210394_103723151	3300021420	Soil	MRFKWLLSAWFLVLSMCAGAQTTVSIASDAPSKEDVQKLFDVMASREQMAQMMQQVFAQARTLNRDEIKKRHPDITADQL
Ga0210384_105276981	3300021432	Soil	VRSKLLPWIGLLLASMCAAQTTVSVAPDAASKEDIRKLFDVMLSRDQMTQMMQQLFAQMQSMSREQIKKKHPDITDSELARMGHESEDLIKHFPLEEMLDDM
Ga0210390_113948352	3300021474	Soil	MRWKSCIWMCALILGWSVCAGAQTTVSVAPDAASKEDVKKLFDVMASREQMAQMMQQMFTQMRNLNREQLKKRHPDLSDAE
Ga0210398_107676061	3300021477	Soil	MRPKSWLCAPLLALSLCAGAQTTVSVAPDAASKEDVKKLFDVMASRQQMAQMMQQLFAQMRTMNRAELKKRHPDVTEADLASMDRRSEEFIKNFPLDAMLNDMIPIYQRHF
Ga0210398_111640231	3300021477	Soil	MTFKSLLSAGLLAFSICAGAQTTVSIAPDAASREDVKKLFDVMASREQMAQMMKQVFTQMRSLNREEIKKRHPDVTEEELARMDRQSEDLLKNFPLD
Ga0210410_100548555	3300021479	Soil	MRVKSLLSAGLLALCTCAGGQTTVSIAPDAASQEDVKKLFDVMASREQMAQMMKQLFGQMRSLNREEIRKRRPEVTEAELARMDRESEDLIKNF
Ga0210409_107370811	3300021559	Soil	MRLKSLLPTFLLIASMSVAQTTVSVAPDAASKEDVKRLFDVMASRDQMAQMMQQLFAQMQSLSREEMKKRHPEVTDAELARMDRQSEELIKNFPLDAMLSDMVPVYQKHFTKSDI
Ga0224562_10009781	3300022733	Soil	MGLKSLLGACLLALSMCACAQTTVSIAPDAASKEDVKKLFDVMASREQMDKMMRQVFTQMQSLNREEMKKRRPDITDAELARFDRESEDVIKNFPLDA
Ga0228597_1060131	3300023012	Plant Litter	MGLKSLLGACLLALSMCACAQTTVSIAPDAASKEDVKKLFDVMASREQMDKMMRQVFTQMQSLNREEMK
Ga0224560_1052892	3300023019	Soil	MGLKSLLGAGLLAFSICAAQTTVSIAPDAASKEDVKKLFDVMASREQMDKMMRQVFTQMQSLNREEMKKRRPDITDAEL
Ga0224558_10767742	3300023090	Soil	MRLKSFISVCVLALSMSSVGQTTVSIAPDAPSKEDVKKLFDVMASREQIGQVMQQVFAQMRSLNREELKKRHPDVSEGDLARMDRQSEDLIKNFPLDEMLSDMVPVYQ
Ga0228598_10184611	3300024227	Rhizosphere	MGLKSLLGACLLALSMCACAQTTVSIAPDAASKEDVKKLFDVMASREQMDKMMRQVFTQMQSLNREEMKKRRPDITDAELARFDRE
Ga0208034_10885032	3300025442	Peatland	MRLKSFISVCVLALSMSSVGQTTVSIAPDAPSKEDVKKLFDVMASREQIGQVMQQVFAQMRSLNREELKKRHPDVSE
Ga0208237_10272621	3300027080	Forest Soil	MRLKSLLFAGVLTLSLCAGAQTTTTVSIAPDAASKEDVKKLFDVMASREQIKQMMQQVFTQMRTLNREEIKKRHPDITQEELARMDR
Ga0208199_10939032	3300027497	Peatlands Soil	MTLKSLLGAFLLGLWICAGMCAGQTTVSVAPDAASKEDIQKLFDVMASREQMAQMMQQLFAQMRTLSREQVKKRHPDISDADLSRMDRQSEEFLKNFPLNDMLNDMVPVYQR
Ga0208044_12143152	3300027625	Peatlands Soil	MRLKLFLPVCFLALSMCAGAQTTVSIAPDAASREDVKKLFDVMASREQIGQMMQQVFAQMRSLNREQIKKRRPGVTEDELARMDRESEDLIK
Ga0208696_10929512	3300027696	Peatlands Soil	MRLKSFLSICLFVLSICAAAQTTVSITPDAASKEDVKKLFDVMASREQMSQMMQQLFAQMRSLNREQLKKRRPDITEAELARSDRESEDLIKNFPLDEMLSDMIPVYQG
Ga0209772_100985721	3300027768	Bog Forest Soil	MKFKSLLSVCLLGLSMCVGICVAQTTVSVAPDAASKEDIQKLFDVMASREQMAQMMQQLFAQMRTLNRDQLKKRHPDISDA
Ga0209656_103114322	3300027812	Bog Forest Soil	MNLRSVLLVCLLALSICAGAQTTVSIAPDAPSKEDVKKLFDVMASREQMSQMMHQVFAQMRSMNREQLKKNNPDMSEADLARMDRESEDLIKNFPIDDMLNDMIPIYQRHFTK
Ga0209039_102175291	3300027825	Bog Forest Soil	MRLKSLLSVCVLALSMSAAAQTTVSIAPDAPSREDVKKLFDVMASREQMTQMMQQLFAQIRAMNREQMKKRRPDITDAELASVD
Ga0209773_100288401	3300027829	Bog Forest Soil	MRSKSLLCTCFLVVSLCAGAQTTVSIAADAPSREDVQKLFDVMASREQMGQMMKQVFAQARTLNRDEIK
Ga0209517_105850711	3300027854	Peatlands Soil	MTLKSLLGAFLLGLWICAGMCAGQTTVSVAPDAASKEDIQKLFDVMASREQMAQMMQQLFAQMRTLSREQVKKRHPDISDADLSRMDRQSEEFLKNFPLNDMLNDMVPVYQRHFTKSDIDTL
Ga0209693_102841611	3300027855	Soil	MRLKSLLGVCVLALCMCAGAPITLAQTTVSIAPDAASREDVQKLFDVMASREQMAQMMQKVFAQARTLNRDEIKKRHPDITADQLASMDRQ
Ga0209693_105028071	3300027855	Soil	MRWKSCIWMCALILGWSVCAGAQTTVSVAPDAASKEDVKKLFDVMASREQMAQMMQQMFTQMRNLNREQLKKRHPDL
Ga0209380_100510071	3300027889	Soil	MKMRLVLSACFVALSLGAGAQTTVSIAPDAASKEDVKKLFDVMASREQMSQLMQQVFAQMRKMNREEIKKRRPEITEA
Ga0302227_100549361	3300028795	Palsa	MRLKSLLSACLLVSSICAGAQTTVSIAPDAASKEDVKKLFDVMASREQIGQMMQQVFAQMRSMNREQVKKRRPDVTEEELARMDRESEDLIKNFPVDAMLSDMIPVYQRHFTKSEI
Ga0302227_102578371	3300028795	Palsa	MRLKSLLCGCLLAVSIYAGAQTTVSVAPDAASKEDVKKLFDVMASRQQMGQMMQQMFTQMRNMNRELLKKK
Ga0302222_100122966	3300028798	Palsa	MRLKSLLCGCLLAVSIYAGAQTTVSVAPDAASKEDVKKLFDVMASRQQMGQMMQQMFTQMRNMNRELLKKKHPEMSDADLA
Ga0302221_105332852	3300028806	Palsa	MKLKSSLLLCLLAVSICAGAQATVSTAPDAASTEDIKKLFDVMASREQMSQMMQQLFAQMRTLSREQIKKKHPDITDTELAQMDRQSQDLIKNFPLDEMLSDMVPVYQ
Ga0302218_100491852	3300028863	Palsa	MRLKSLLCGCLLAVSIYAGAQTTVSVAPDAASKEDVKKLFDVMASRQQMGQMMQQMFTQMRNMNRELLKKKHPEMSDADLARGDRESEDLIKNFPMDEMLN
Ga0302218_102382651	3300028863	Palsa	MKLKSSLLLCLLAVSICAGAQATVSTAPDAASTEDIKKLFDVMASREQMSQMMQQLFAQMRTLSREQIKKKHPDITDTELAQMDRQSQDLIK
Ga0308309_102670201	3300028906	Soil	MRFKSLLGACVLAASLCSAQTTVSIAPDAASKEDIKKLFDVMLSRDQMTQMMQQLFTQMQNMSREQIKKKHP
Ga0308309_105186783	3300028906	Soil	MRLRSWLCAPLLVALSLCAGAQTTVSVAPDAASKEDVKKLFDVMASRQQMAQMMQQLFGQMRTMNRAELKKRHPDVTDADLASMDRR
Ga0311326_105342681	3300029917	Bog	MGLKSLLCVCLLALSTCAGAQTTVSVAPDAASKEDVRRLFDVMASREQMGQTIRQVFAQMQTLNREEIKKKRPDVTPEELARLDRESEDVIKNFPMDAMLSDMIPVYQRHFTKSEIDG
Ga0311340_101328631	3300029943	Palsa	MRLKSLLCGCLLAVSIYAGAQTTVSVAPDAASKEDVKKLFDVMASRQQMGQMMQQMFTQMRNMNRELLKKKHPEMSDADLARGDRESEDLIKNFPMD
Ga0311352_107112122	3300029944	Palsa	MRLRSLPLACLIALSMCAGAQTTVSVAPDAVSKEDVQKLFDLMASRDQMRQMMQQVFAQMRSLNREQVRKRRPDVSEEEL
Ga0311371_100636616	3300029951	Palsa	MRLKSLLCGCLLAVSIYAGAQTTVSVAPDAASKEDVKKLFDVMASRQQMGQMMQQMFTQMRNMNRELLKKKHPEMSDADLARGDRESEDLI
Ga0302150_101869761	3300029956	Bog	MGLKSLLCVCLLALSTCAGAQTTVSVAPDAASKEDVRRLFDVMASREQMGQTIRQVFAQMQSLNREEIKKKRPDVTAEELARLDRESEDVIKNFPMDAMLSDMIPVYQRHFT
Ga0311339_108267591	3300029999	Palsa	MRLRSLPLACLIALSMCAGAQTTVSVAPDAVSKEDVQKLFDLMASRDQMRQMMQQVFAQMRSLNREQVRKRRPDVTEEELARIDRESED
Ga0302306_100370212	3300030043	Palsa	MRLKSLLCGCLLAVSIYAGAQTTVSVAPDAASKEDVKKLFDVMASRQQMGQMMQQMFTQMRNMNRELLKKKHPEMSDADLARGDRESEDLIKNFPMDEMLNDMIPIYQRHFTK
Ga0311357_102044142	3300030524	Palsa	MRLKSLLSACLLVSSICAGAQTTVSIAPDAASKEDVKKLFDVMASREQIGQMMQQVFAQMRSMNREQVKKRRPDVTEEELARMDRESEDLIKNFPVDAMLSDMIPVYQRHFTKSEIDAL
Ga0311357_105105581	3300030524	Palsa	MRLKSLLIAFLLALPMYAGAQTTVSIAPDAASKEDVKKLFDVMASRDQLNQMMQQLFAQMRTLNRQQLKKQHPEVTEQELASMDR
Ga0311357_108797371	3300030524	Palsa	MRLRSLPFACLIALSMCAGAQTTVSVAPDAVSKEDVQKLFDLMASRDQMRQMMQQVFAQMRSLNREQVRKRRPDVTEEELARIDRESEDVIKNFPLDAMLSD
Ga0311355_111499441	3300030580	Palsa	MRFKSLLSTCFLVVSMCAGAQTTVSIAPDAPSKEDVQKLFDVMASREQMAQVMQKVFAQMRTLNRDEIKKRHPDVT
Ga0311354_101010191	3300030618	Palsa	MRLKSLLIAFLLALPMYAGAQTTVSIAPDAASKEDVKKLFDVMASRDQLNQMMQQLFAQMRTLNRQQLKKQHPEVTEQELASMDRE
Ga0302309_100977592	3300030687	Palsa	MRLKSLLSACLLVSSICAGAQTTVSIAPDAASKEDVKKLFDVMASREQIGQMMQQVFAQMRSMNREQVKKRRPDVTEEELARMDRES
Ga0302310_104337002	3300030737	Palsa	MRLRSLPFACLIALSMCAGAQTTVSVAPDAVSKGDVQKLFDLMASRDQMRQMMQQVFAQMRSLNREQVRK
Ga0265760_101010781	3300031090	Soil	MRWKSCLWVCVLFLGWSVCSGAQTTVAIAPDAASKEDVQKLFDVMASRAQMAQMMQQMFTQMRNMNREMIKKKHPEMSDADLARRD
Ga0302318_106894951	3300031258	Bog	MGLKSLLCVCLLALSTCAGAQTTVSVAPDAASKEDVRRLFDVMASREQMGQTIRQVFAQMQSLNREEIKKKRPDVTAEELARLDRESEDVIKNFPMDAMLSDMIPVYQRHFTKSEIDG
Ga0170818_1022230851	3300031474	Forest Soil	MKLKLWLWACFLALSVCAGAQTTVSIAPDAASKEDVKKLFDVMTSRDQMAQLLQQLFAQMRSLNREQLKKKRPDLTDADLARMDRESEDLI
Ga0310686_1003989326	3300031708	Soil	MRLKSMLCGCFLAVSMCASAQTTVSAAPDAASKEDVKKLFDVMASREQMAQIMQQVFAQMKNMNREQMKKNHPEMTDADLARRDRESDDLIKNFPLDEMLNDMIPIYQRHFT
Ga0310686_1018913104	3300031708	Soil	MTLRSLLGAFLLGLSMWVGMCAAQTTVSVAPDAASKEDVQKLFDVMASREQMGQMMQQLFAQMRTLSREQMKKRHPEMTEAELSRIDRQSEDLLKNFQFDD
Ga0310686_1031591072	3300031708	Soil	MRFKSLLAVCLIAFSIFAGAQTTVSIAPDPASKEDVKKLFDVMASREQMSQMMRKVFAQTQSLNHDEIKKRHPDVTDAELARMDKQSEDLIKNFPLDEML
Ga0310686_1141226122	3300031708	Soil	MRLKSWLFSCLLAFSIFAGAQTTVSIAPDPASKEDVKKLFDVMASREQMSQMMRKVFAQTQSLNHDEIKKRHPDVTDAELARMDKQSEDLIKNFPLDEML
Ga0307476_112126801	3300031715	Hardwood Forest Soil	VRSRLLPLIGLLLASMCAAQTTVSVAPDAASKEDIRKLFDVMLSRDQMTQMMQQLFAQMQSMSREQIKKKHPDITDSELASMDHESQDLIKHFPLEE
Ga0307474_105025892	3300031718	Hardwood Forest Soil	MTFKSLLSAGLLAFSICAGAQTTVSIAPDAASKEDVKKLFDVMASREQMAQMMKQVFTQMRSLNREEIKKRHPGVTEEELARMDRQSEDLLKNFPLD
Ga0307478_105371423	3300031823	Hardwood Forest Soil	WIGLLLASMCAAQTTVSVAPDAASKEDIKKLFDVMLSRDQMNQMMQQLFAQMQSMSREQIKKKHRDITDSELASMITSRRT
Ga0307478_114908682	3300031823	Hardwood Forest Soil	MRFKSLLCASFIVLALSAGAQSAGAQTTVSIAPDAASKEDVKKLFDVMASREQMAQMMKQVFTQMRSLNREEIKKRHPDIT
Ga0302315_104730431	3300031837	Palsa	MRLKSLLSACLLVSSICAGAQTTVSIAPDAASKEDVKKLFDVMASREQIGQMMQQVFAQMRSMNREQVKKRRPDVTEEELARMDRESED
Ga0348332_124518791	3300032515	Plant Litter	MTLKSFLCAGLIAFSMCAGAQTTVSIAPDAPSKEDVKKLFDVMASREQKDKTMRQVFAQMQSLNREEMKKRRPDVTEAELARLDRQSEDVIKNFPLDAMLSDMIP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097740

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences