Metagenome / Metatranscriptome Family F097710

Basic Information
Family ID	F097710
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	60 residues
Representative Sequence	MKSAIFAVVLLTLGLFSLPVLAQQQDLQEVMNAANALSARENELLSKKDAAGIASLFTSDGLLV
Number of Associated Samples	80
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	94.23 %
% of genes near scaffold ends (potentially truncated)	91.35 %
% of genes from short scaffolds (< 2000 bps)	99.04 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (82.692 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (28.846 % of family members)
Environment Ontology (ENVO)	Unclassified (24.038 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (71.154 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 65.22% β-sheet: 0.00% Coil/Unstructured: 34.78%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF13358	DDE_3	1.92
PF09939	DUF2171	0.96
PF13565	HTH_32	0.96
PF00293	NUDIX	0.96
PF03466	LysR_substrate	0.96
PF16980	CitMHS_2	0.96
PF13817	DDE_Tnp_IS66_C	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
All Organisms	root	All Organisms	17.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
cellular organisms	root	All Organisms → cellular organisms	17.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	17.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.65 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.96 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3.85 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.96 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3.85 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.96 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.96 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.88 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.92 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.96 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.96 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	82.69 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.92 %
Bradyrhizobium sp. LTSP885	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	0.96 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.96 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.96 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig11376	Not Available	1530	Open in IMG/M
3300004092\|Ga0062389_104015524	Not Available	553	Open in IMG/M
3300004479\|Ga0062595_102411988	Not Available	522	Open in IMG/M
3300005163\|Ga0066823_10094990	Not Available	604	Open in IMG/M
3300005341\|Ga0070691_10801986	Not Available	573	Open in IMG/M
3300005347\|Ga0070668_101962916	Not Available	539	Open in IMG/M
3300005436\|Ga0070713_101394620	Not Available	679	Open in IMG/M
3300005764\|Ga0066903_100768432	Not Available	1715	Open in IMG/M
3300005764\|Ga0066903_105130246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	694	Open in IMG/M
3300005764\|Ga0066903_106335478	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	618	Open in IMG/M
3300005764\|Ga0066903_107026488	Not Available	584	Open in IMG/M
3300005764\|Ga0066903_107899273	Not Available	546	Open in IMG/M
3300005844\|Ga0068862_101363387	Not Available	712	Open in IMG/M
3300005921\|Ga0070766_10940660	Not Available	593	Open in IMG/M
3300006086\|Ga0075019_10392691	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300006086\|Ga0075019_10826047	Not Available	591	Open in IMG/M
3300006162\|Ga0075030_100646914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	838	Open in IMG/M
3300006176\|Ga0070765_100763130	Not Available	914	Open in IMG/M
3300006176\|Ga0070765_101919002	Not Available	555	Open in IMG/M
3300006603\|Ga0074064_11074066	Not Available	633	Open in IMG/M
3300007982\|Ga0102924_1227316	Not Available	787	Open in IMG/M
3300009100\|Ga0075418_13133604	Not Available	504	Open in IMG/M
3300009521\|Ga0116222_1424741	Not Available	579	Open in IMG/M
3300009522\|Ga0116218_1506178	Not Available	538	Open in IMG/M
3300009672\|Ga0116215_1151272	Not Available	1030	Open in IMG/M
3300010366\|Ga0126379_11364222	Not Available	815	Open in IMG/M
3300010371\|Ga0134125_10979884	Not Available	927	Open in IMG/M
3300010379\|Ga0136449_101724039	Not Available	942	Open in IMG/M
3300010400\|Ga0134122_12298237	Not Available	585	Open in IMG/M
3300012957\|Ga0164303_10349091	Not Available	893	Open in IMG/M
3300012958\|Ga0164299_10509668	Not Available	802	Open in IMG/M
3300012961\|Ga0164302_10196122	Not Available	1237	Open in IMG/M
3300012961\|Ga0164302_10676694	Not Available	760	Open in IMG/M
3300013297\|Ga0157378_10616946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1097	Open in IMG/M
3300013306\|Ga0163162_10917278	Not Available	988	Open in IMG/M
3300015372\|Ga0132256_101410484	Not Available	808	Open in IMG/M
3300015374\|Ga0132255_101516059	Not Available	1015	Open in IMG/M
3300015374\|Ga0132255_103114861	Not Available	707	Open in IMG/M
3300016319\|Ga0182033_12009957	Not Available	526	Open in IMG/M
3300016341\|Ga0182035_11363774	Not Available	636	Open in IMG/M
3300016357\|Ga0182032_11916852	Not Available	519	Open in IMG/M
3300016387\|Ga0182040_11937045	Not Available	506	Open in IMG/M
3300016404\|Ga0182037_10553176	Not Available	971	Open in IMG/M
3300016404\|Ga0182037_11028480	Not Available	719	Open in IMG/M
3300016404\|Ga0182037_11325283	Not Available	635	Open in IMG/M
3300016404\|Ga0182037_11829555	Not Available	543	Open in IMG/M
3300016445\|Ga0182038_10738920	Not Available	859	Open in IMG/M
3300016445\|Ga0182038_11245479	Not Available	664	Open in IMG/M
3300017924\|Ga0187820_1154424	Not Available	693	Open in IMG/M
3300017955\|Ga0187817_10966588	Not Available	545	Open in IMG/M
3300017970\|Ga0187783_10219803	Not Available	1393	Open in IMG/M
3300017970\|Ga0187783_11007184	Not Available	600	Open in IMG/M
3300018037\|Ga0187883_10552811	Not Available	595	Open in IMG/M
3300018058\|Ga0187766_11059635	Not Available	580	Open in IMG/M
3300020580\|Ga0210403_11309613	Not Available	553	Open in IMG/M
3300020582\|Ga0210395_10698953	Not Available	758	Open in IMG/M
3300020582\|Ga0210395_10933851	Not Available	644	Open in IMG/M
3300020582\|Ga0210395_11221176	Not Available	552	Open in IMG/M
3300020583\|Ga0210401_10049525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3970	Open in IMG/M
3300020583\|Ga0210401_10669674	Not Available	898	Open in IMG/M
3300021168\|Ga0210406_11084262	Not Available	590	Open in IMG/M
3300021171\|Ga0210405_10965678	Not Available	644	Open in IMG/M
3300021178\|Ga0210408_10350043	Not Available	1178	Open in IMG/M
3300021401\|Ga0210393_11152162	Not Available	625	Open in IMG/M
3300021401\|Ga0210393_11225415	Not Available	603	Open in IMG/M
3300021403\|Ga0210397_10663763	Not Available	800	Open in IMG/M
3300021403\|Ga0210397_10898269	Not Available	686	Open in IMG/M
3300021404\|Ga0210389_10437690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1029	Open in IMG/M
3300021406\|Ga0210386_10789633	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	816	Open in IMG/M
3300021407\|Ga0210383_10369774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. LTSP885	1236	Open in IMG/M
3300021407\|Ga0210383_10622378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	930	Open in IMG/M
3300021407\|Ga0210383_11426295	Not Available	575	Open in IMG/M
3300021433\|Ga0210391_10495965	Not Available	959	Open in IMG/M
3300021474\|Ga0210390_10194190	All Organisms → cellular organisms → Bacteria → Proteobacteria	1717	Open in IMG/M
3300021474\|Ga0210390_10206848	All Organisms → cellular organisms → Bacteria → Proteobacteria	1660	Open in IMG/M
3300021474\|Ga0210390_11068386	Not Available	657	Open in IMG/M
3300021474\|Ga0210390_11133137	Not Available	634	Open in IMG/M
3300021475\|Ga0210392_11399447	Not Available	523	Open in IMG/M
3300021479\|Ga0210410_10455299	Not Available	1144	Open in IMG/M
3300021479\|Ga0210410_11302328	Not Available	619	Open in IMG/M
3300021559\|Ga0210409_11179818	Not Available	641	Open in IMG/M
3300025899\|Ga0207642_10659639	Not Available	656	Open in IMG/M
3300025927\|Ga0207687_10724664	Not Available	845	Open in IMG/M
3300025929\|Ga0207664_10930087	Not Available	780	Open in IMG/M
3300025961\|Ga0207712_11717579	Not Available	563	Open in IMG/M
3300025972\|Ga0207668_11838118	Not Available	546	Open in IMG/M
3300027174\|Ga0207948_1006079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1377	Open in IMG/M
3300027545\|Ga0209008_1076614	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300027570\|Ga0208043_1061369	Not Available	1076	Open in IMG/M
3300027703\|Ga0207862_1097864	Not Available	882	Open in IMG/M
3300027895\|Ga0209624_10233143	Not Available	1223	Open in IMG/M
3300027907\|Ga0207428_11282527	Not Available	508	Open in IMG/M
3300027986\|Ga0209168_10446173	Not Available	627	Open in IMG/M
3300031057\|Ga0170834_107935165	Not Available	542	Open in IMG/M
3300031231\|Ga0170824_123532313	Not Available	513	Open in IMG/M
3300031682\|Ga0318560_10107172	All Organisms → cellular organisms → Bacteria → Proteobacteria	1451	Open in IMG/M
3300031708\|Ga0310686_114267959	All Organisms → cellular organisms → Bacteria	1714	Open in IMG/M
3300031823\|Ga0307478_11276862	Not Available	611	Open in IMG/M
3300031833\|Ga0310917_11053699	Not Available	544	Open in IMG/M
3300031890\|Ga0306925_11462166	Not Available	671	Open in IMG/M
3300031945\|Ga0310913_10120981	All Organisms → cellular organisms → Bacteria	1787	Open in IMG/M
3300031954\|Ga0306926_11737130	Not Available	711	Open in IMG/M
3300032160\|Ga0311301_11290492	Not Available	924	Open in IMG/M
3300032261\|Ga0306920_100630674	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1584	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.54%
Host-Associated	Host-Associated	12.50%
Engineered	Engineered	0.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.85%
Plants	Host-Associated → Plants	12.50%
Aquatic	Environmental → Aquatic	7.69%
Modeled	Engineered → Modeled	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	78.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.69%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%
Freshwater	Environmental → Aquatic → Freshwater	3.85%
Sediment	Environmental → Aquatic → Sediment	2.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.54%
Loam	Environmental → Terrestrial → Soil → Loam	14.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	44.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.35%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.92%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.96%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.50%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006603	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0376.00001230	2166559005	Simulated	MKSAIFAVVLLTLGLLSLPVLAQQQDLQDVMNAANALSARESELLGKKERGGR
Ga0062389_1040155241	3300004092	Bog Forest Soil	MKGAMFAVALLTFGCFVFPAFAQQQDLQEIMNATNALGARESELLSKKDAAG
Ga0062595_1024119882	3300004479	Soil	MKNVIFAVVLLTIGCFGLPIRAQQQDLQEVMNAINALGARESELLGKKDAAGIASLFTSDGLLVTL
Ga0066823_100949902	3300005163	Soil	MKSLIFAVVLLMVGSFSLPVLAQQQDLQEIMNATKALGARQNELLGKKDAAGIASLFTSDGLLVMLAPQFAFK
Ga0070691_108019861	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MKSLIFAVVLLMVGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKD
Ga0070668_1019629161	3300005347	Switchgrass Rhizosphere	MKSTIFAVVVVTLGCFSLPIFAQQQDLQDVMNAANALSARESELLGKKDAAGIASLFTSDGLLVMLAPQFT
Ga0070713_1013946201	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKSLIFAVVLLMVGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKDAAGIAS
Ga0066903_1007684323	3300005764	Tropical Forest Soil	MKNVIFAVVLLTIGCFALPIRAQQQDLQEVMNAINALGARENELLSKKDAAGIASLFTSD
Ga0066903_1051302461	3300005764	Tropical Forest Soil	MKGTIFTVVFLTIGFFALPICAQQQDLQEVMNAINALGARENELLSKKDAAGIASLFTSDGLLVMLAPQFA
Ga0066903_1063354781	3300005764	Tropical Forest Soil	MKRTIFAGVLLMVGCFSLPILAQQQDLQDVMNAANALGARESELLSKKDAAGIAALFTSDGLLVMLAPQ
Ga0066903_1070264881	3300005764	Tropical Forest Soil	MKGAMFAVAVLTVGCCTLPTFAQQQDLQEVMNATNALSARENELLSKKDAA
Ga0066903_1078992731	3300005764	Tropical Forest Soil	MKGAIFAVALLTVGCFSLSTFAQQQDLQEVMNAANTLGARESELLSKKDAAGIASLF
Ga0068862_1013633871	3300005844	Switchgrass Rhizosphere	MKSTIFAVVVVTLGCFSLPIFAQQQDLQDVMNAANALSARESELLGKKDAAGIASLF
Ga0070766_109406602	3300005921	Soil	MRRTIFAVALLMVGCFALPLFAQQQDLQEVMDAAKALSARESELLSKKDAAGIASLFTSDGLLVML
Ga0075019_103926912	3300006086	Watersheds	MKSAISAVVLLTLGFLSLPLLAQQQDLQDVMNAANALSARENELLSKKDAAGIA
Ga0075019_108260472	3300006086	Watersheds	MAHLVEPLPILLMVCCFSIPIFAQQQDLQEVMNAINALGAQENDMLSKKD
Ga0075030_1006469141	3300006162	Watersheds	MKGAMFAAALVTFGCFVFPVFAQQQDLQEIMNATIALGARESELLSKKDAAGIASLFTSDGLL
Ga0070765_1007631301	3300006176	Soil	MKSLIFAVVLLMVGSFSLPILAQQQDLQEIMNATNALGARQNELLGKKDAAGI
Ga0070765_1019190022	3300006176	Soil	MKSAIFAAVLVTLGCFSLPVLAQQQDLQDVMNAANALSARESELLSKKD
Ga0074064_110740661	3300006603	Soil	MKSLIFAVVLLMIGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKDAAGIASLFTSDGLLVT
Ga0102924_12273161	3300007982	Iron-Sulfur Acid Spring	MKSLIFAVVLLMVGSFSLPVLAQQQDLQEVMNAINALGGRESELLGKKDAAGRA
Ga0075418_131336041	3300009100	Populus Rhizosphere	MKSLIFAVVLLMVGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKDAAGIASLF
Ga0116222_14247411	3300009521	Peatlands Soil	MKSAIFAVVLLTLGCFSLPIFAQEQDLQEVMNATNALSARENELLSKK
Ga0116218_15061781	3300009522	Peatlands Soil	MKSLIFAVVLLMVGSFSLPVLAQQQDLQEIMNATNALGARQHELLGKKDAAGIAS
Ga0116215_11512723	3300009672	Peatlands Soil	LLTVLCFSSSIFAQQPNLQEVMDAVNALNARQGELLSKKDAAGIASLFTSDGLLVMLAP*
Ga0126379_113642221	3300010366	Tropical Forest Soil	MKRTIVPVVFLTVAFLSFPVFAQQQDLQEVMNAANALSARENELLGKKDAAGIASLFTSDGLLVMLAP
Ga0134125_109798841	3300010371	Terrestrial Soil	MKNVIFAVVLLTIGCFGLPIRAQQQDLQEVMNAINALGARESELLGKKDAA
Ga0136449_1017240391	3300010379	Peatlands Soil	MKSSIFTVVLLTVGCFSLPICAQQKDLQEIMNAVTALSARENELLTKKDAAGIASLFTSDGLLVMLA
Ga0134122_122982371	3300010400	Terrestrial Soil	MKSTIFAVVVVTLGCFSLPIFAQQQDLQDVMNAANALSARESELLSKKDAPGIASLFTSDGLLVMLAPQFAFKP
Ga0164303_103490911	3300012957	Soil	MKSAIFAVVLLTLGLLSLPVLAQQQDLQDVMNAANALSARESELLGKKDAAGGQLV*
Ga0164299_105096682	3300012958	Soil	MKSLIFAVVLLMVGSFSLPILAQQQDLQEIMNATNALGARQNELLGKKDA
Ga0164302_101961223	3300012961	Soil	MKATIFAVVLLMVGSFSLPVLAQQQDLQEIMNATNALGARQNDLLGKKDAAGIASL
Ga0164302_106766941	3300012961	Soil	MKSAIFAVVLLTLGLLSLPVLAQQQDLQDVMNAANALSARESELLGKKDAAGIASLFTSDGLL
Ga0157378_106169461	3300013297	Miscanthus Rhizosphere	MKRLIFAVVLLMVGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKDAAGIASLFTSDGLLVM
Ga0163162_109172782	3300013306	Switchgrass Rhizosphere	MKSTIFAVVVVTLGCFSLPIFAQQQDVQDVMNAANALSARESELLGKKD
Ga0132256_1014104841	3300015372	Arabidopsis Rhizosphere	MKGAIFAVVLLTVGSFSLPTFAQQQDLQEVMDATSALSARENQLLSKKDA
Ga0132255_1015160591	3300015374	Arabidopsis Rhizosphere	MKATIFAVASLTFACFALPSFAQQQDLQEVMIAANALGAKENELLGKKDA
Ga0132255_1031148611	3300015374	Arabidopsis Rhizosphere	MKKAIFAIALLTVGCFSLPLFAQQQDLQEVMNATNALGTKENDLLSKKDAAGHIRWAVSDARTA
Ga0182033_120099571	3300016319	Soil	MKRTIFAGVLVAVSCFSLPTLAQQQDLQEVINATNALDARQNELLGKKDAAGLAAL
Ga0182035_113637741	3300016341	Soil	MKVTIFAVVLMTIGCFALPIFAQQQDLQEVMNATNALGARENELLSKKDAAGIASLFTSDGLLVMLAPQFAFK
Ga0182032_119168521	3300016357	Soil	MKAAIFAVVLLTIGFFALPIFAQQQDLQEVMNATNALGARENELLGKKDAAGIASLFTSDGLLVMLAPQFA
Ga0182040_119370451	3300016387	Soil	MVPFFNRGGFTMKGAMVAVAVLAVGCCTLPTFGQEQDLQEVMNATNALGAKENELLGKKDAAGIASLFASDA
Ga0182037_105531761	3300016404	Soil	MKRTIFAGVLLTVGCFSLPILAQQQDLQDVMNAANALGARESELLSKKDAAGIAALFTSD
Ga0182037_110284801	3300016404	Soil	MKGAMFAVAVLAAGCCTLPTFAQGQDLQEVMNATNALGAKENELLSK
Ga0182037_113252831	3300016404	Soil	MKATIFAVVLLTIGCFALPIFAQQQDLQEIMNATNALGARENELLSKKDAAGIASLFTS
Ga0182037_118295551	3300016404	Soil	MKGTIFAVVLLTIGCFALPLFAQQQDLQEVMNATNALGVRENELLSKKDAAGIASLFTSDGLLVM
Ga0182038_107389201	3300016445	Soil	MKVTIFAVVLMTIGCFALPIFAQQQDLQEVMNATNALGARENELLSKKDAAGIASLFTADGLLVVLAPQFA
Ga0182038_112454793	3300016445	Soil	FAVAVLTVGCCTLPTFAQQQDLQEVMDATNALSARENELLSKSSHRMDCL
Ga0187820_11544241	3300017924	Freshwater Sediment	MFAVVLLTVSCFSLPIFAQQQDLQEVMSAANALGARESELLSKKDAAGIASLFTSDGL
Ga0187817_109665882	3300017955	Freshwater Sediment	MKGAMFAVALLTVGCFSSPIFAEEQDLQEVMNATNALSARQNELLSK
Ga0187783_102198031	3300017970	Tropical Peatland	MKATIFAVALLTIVCFALPICAQQDLQEVMNAANALGARENELLGKKDAAGIASLFTQDGLIVMLAPQF
Ga0187783_110071842	3300017970	Tropical Peatland	MAPLTIGCFALPIFAQQQDLQEVMNAINALGAPENELLSKKDAAG
Ga0187883_105528111	3300018037	Peatland	MKSAIFAVVLLTLGLLSLPVLAQQQDLQDVMNAANALGARESELLGKKDAPGIASLFTSDGLLVM
Ga0187766_110596352	3300018058	Tropical Peatland	MKGTIFAVVLLTIGCFALPIFAQQQDLQEVMNAINALGAPENELLGKKDAAG
Ga0210403_113096131	3300020580	Soil	MKSAIFAVVLLTLGLLSLPVLAQQQDLQDVINAANALSARESELLGKKDAAGIASLFTSDGLLVMLAPQFAFK
Ga0210395_106989531	3300020582	Soil	MKRAMFAVALLTFGCFSLPIFAQQQDLQEVMNAANALGTRENELLSKKDAAGIASLFTSDGLL
Ga0210395_109338512	3300020582	Soil	MKSAIFAAVLVTLGCFSLPVLAQQQDLQDVMNAANALSARENELLSKKDAAGIASLFTSDGLL
Ga0210395_112211761	3300020582	Soil	MKSLIFAVVLLMVGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKDAAGIASLFTSDGLLVTLAP
Ga0210401_100495251	3300020583	Soil	MKSAIFAAALLMVGCLSLPVLAQQPELQELMNATNALGTRESDLLSKKDAAGIASLFTSDALLVMLAPHYG
Ga0210401_106696741	3300020583	Soil	MKSLIFAVVLLMIGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKK
Ga0210406_110842622	3300021168	Soil	MKSLIFAVVLLMVGSFSLPILAQQQDLQEIMNATNALGARQNELLGKKDAAGIASLFTSDGLLVTLAPQFAFKPG
Ga0210405_109656781	3300021171	Soil	MKSAIFAVVLLTLGLLSLPVLAEQQDLQDVMNAANALSARESELLGKKDAAGIASLFTSDGLLV
Ga0210408_103500431	3300021178	Soil	MKATIFAVVLLTIGCFALPICAQQQDLQEVMDAINALGARENELLGKKDAAGIASLFTSDGLLVMLAPQ
Ga0210393_111521621	3300021401	Soil	MKGAIFAVAALAVGCCTLPTFAQQQDLQEVMNAANALSARESELLGKKDAAGIAALFTSDGLLVILAPFSYRQRPDDPRELV
Ga0210393_112254151	3300021401	Soil	MKSAIFAVVLLTLGLLSLPVLAQQQDLQDVMNAANALSARESELLGKKDAAGIASLFTSDGL
Ga0210397_106637631	3300021403	Soil	MKSSIFTVVLLTVGCFSLPICAQQQDLQEVMNAVTALSARENELLTKKDAAGIASL
Ga0210397_108982692	3300021403	Soil	MKSLIFAVVLLMIGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKDAAGIASLFTSDGLLV
Ga0210389_104376901	3300021404	Soil	MKRAIFAIVSLTVGCFSLPVLAQQQDLQEVMKAANALGTRESELLSKKDAAGIA
Ga0210386_107896333	3300021406	Soil	LLLLGCFVFPVFAQQQDLQEVMNAANALGARESELLSKKDAAG
Ga0210383_103697741	3300021407	Soil	MKGATFAVAALAVGCCTLPTFAQQQDLQEVMNAANALSARESELLGKKDAAGIAALFTSDGLLVMLAPQFAFKP
Ga0210383_106223783	3300021407	Soil	MKRTILAAALLTFGCFSLPVLAQQPELQELMNATNALGTRESELLSKKDAAGIASLF
Ga0210383_114262951	3300021407	Soil	MKRAIFAVVLLTVGCFSLPILAQQQDLQEVMNAANALSAREGELLGK
Ga0210391_104959651	3300021433	Soil	MKSAIFAVVLLTLGLFSLPVLAQQQDLQEVMNAANALSARENELLSKKDAAGIASLFTSDGLLV
Ga0210390_101941901	3300021474	Soil	MKRAIFAIVSLTVGCFSLPVLAQQQDLQEVMKAANALGTRESELLSKKDAAGIASLFASDGLLVTLA
Ga0210390_102068482	3300021474	Soil	MKGAIFAVAALAVGCCTLPTFAQQQDLQEVMNAANALSARESELLGKKDAAG
Ga0210390_110683861	3300021474	Soil	MKRAMFAVALLTVGCFSLPIFAQQQDLQEVMNAANALSARENELLSKKDAAGIASL
Ga0210390_111331372	3300021474	Soil	MKCAMFAVALLTVGCFSLPIFAQQQDLQEVMNATNALSARESELLGKKDAAGIASLFTSDGLLVMLAPQ
Ga0210392_113994472	3300021475	Soil	MKATIFAVVLLMVGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKDAAGIASLFTSDGLLVMLAPQFAF
Ga0210410_104552993	3300021479	Soil	MKATIFAVVLLMVGSFSLPVLAQQQDLQEIMNATNALGARQNDLLGKKDAAGIASLFTSD
Ga0210410_113023281	3300021479	Soil	MKRAILLAALLTFCCFSLPVLAQQPELQELMNATNALGTRESDLLSKKDAAGIASLFTSDALLVMLAPQY
Ga0210409_111798181	3300021559	Soil	MRRTIFAGVLLTVGCFSLPILAQQQDVQDVMNATSALAARESELLGKKDAAG
Ga0207642_106596391	3300025899	Miscanthus Rhizosphere	MKSLIFAVVLMMVGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKDAAGIASLFT
Ga0207687_107246641	3300025927	Miscanthus Rhizosphere	MKSLIFAVVLMMVGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKDAAGIASLFTSD
Ga0207664_109300872	3300025929	Agricultural Soil	MKSLIFAVVLLMVGSFSLPVLAQQQDLQEIMNATNALGARQNELLGKKDAAGI
Ga0207712_117175791	3300025961	Switchgrass Rhizosphere	MKNVIFAVVLLTIGCFGLPIRAQQQDLQEVMNAINALGARESELLGKKDAAGIASLFTSDGLLVTLAPQFAFK
Ga0207668_118381181	3300025972	Switchgrass Rhizosphere	MKSTIFAVVVVTLGCFSLPIFAQQQDLQDVMNAANALSARESELLGKKDAAGIASLFTSDGLLVMLAPQFTFK
Ga0207948_10060792	3300027174	Forest Soil	MKSAIFAVVLLTLGLLSLPVLAQQQDLQDVMNAANALSARESELLGKKDAAGIASLFTSDGLLVMLVPTFLCE
Ga0209008_10766141	3300027545	Forest Soil	MKRAILLAALLTFCCFSLPVLAQQPELQELMNATNALGTRESDLLSKKDAAGIASLFTS
Ga0208043_10613691	3300027570	Peatlands Soil	MKGAMLAVVLLTVGCFSLPVLAQQQDLQEVMDAANALSARENELLSKKDAAG
Ga0207862_10978641	3300027703	Tropical Forest Soil	MKSSIFTVVLLTVGCFALPIFAQQQDLQEVMNAVTALSARENELLLKKDAAGIASLFTSDGLLVMLAPQ
Ga0209624_102331431	3300027895	Forest Soil	MKSSIFTVVLLTIGGFSLPICAQQQDLQEVMNAVTALSARENELLTKKDAAGIASLFTS
Ga0207428_112825271	3300027907	Populus Rhizosphere	MKSTIFAVVVVTLGCFSLPIFAQQQDLQEVMNAINALGARESELLGKKDAAGIA
Ga0209168_104461731	3300027986	Surface Soil	MIMKHAFFAAAILTVSCFAFPAFAEQPDLQEIMNASNALGSQEKELLNKKD
Ga0170834_1079351651	3300031057	Forest Soil	MKGAMFAVALLTVGCFSSPIFAQQQELQEVMDAANALSARQSELLSKKDAAGIASLFTS
Ga0170824_1235323132	3300031231	Forest Soil	MKGAMFAVALLTVGCFSSPIFAQQQELQEVMDAANALSARQSELLSKKD
Ga0318560_101071723	3300031682	Soil	MKATIFAVVLLTIGCFALPIFAQQQDLQEIMNATNALGARENELLSKKDAAGIASLFTSDGLLY
Ga0310686_1142679591	3300031708	Soil	ALLTVGCFSSPIFAQQQELQEVMDAANALSARQSELLSKKDAAGIASLFTSDGLLPSGQARPSIVR
Ga0307478_112768621	3300031823	Hardwood Forest Soil	MKGAMFAAALVTFGCLVFPVFAQQQDLQEIMNATIALGARESELLSKKDAAGIASLFTSDGLLVVL
Ga0310917_110536991	3300031833	Soil	MKDAIFAVALLTVGCFSLPTFAQQQDLQEVMNAANALGARESELLGKKDAAGIASLFTSDGLLVM
Ga0306925_114621661	3300031890	Soil	MKRTIFAGVLVAVSCFSLPTLAQQQDLQEVINATNALDARQNELLGKKDAA
Ga0310913_101209811	3300031945	Soil	MKVTIFAVVLLTIGCFALPICAQQQDLQEVMNAINSLGARENELLSKKDAAGIASLFTSDGLLY
Ga0306926_117371301	3300031954	Soil	MKGAMFAVAVLAAGCCTLPTFAQEQDLQEVMNATNALGAKENELLGKKDAAGIASLFT
Ga0311301_112904921	3300032160	Peatlands Soil	MKSSIFTVVLLTVGCFSLPICAQQKDLQEIMNAVTALSARENELLTKKDAAGIASLFT
Ga0306920_1006306741	3300032261	Soil	MKRTIFAGVLLLVGCFSLPILAQQQDLQDVMNAANALGARESELLSKKDAAGIAALFTSDGLLVMLAPQ

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097710

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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