Metagenome Family F097671

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097671
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	72 residues
Representative Sequence	MVPVLVFFGVATLFGCLFRGIVGLRLRAVARQPDVSDGELCELKQANRITSVAVVASLVGLAVIGLAYAVF
Number of Associated Samples	85
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.88 %
% of genes near scaffold ends (potentially truncated)	26.92 %
% of genes from short scaffolds (< 2000 bps)	95.19 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.962 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.308 % of family members)
Environment Ontology (ENVO)	Unclassified (28.846 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 64.65% β-sheet: 0.00% Coil/Unstructured: 35.35%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF05117	DUF695	9.62
PF00753	Lactamase_B	6.73
PF00171	Aldedh	5.77
PF03992	ABM	1.92
PF06305	LapA_dom	0.96
PF00561	Abhydrolase_1	0.96
PF08392	FAE1_CUT1_RppA	0.96
PF00797	Acetyltransf_2	0.96
PF12681	Glyoxalase_2	0.96
PF11716	MDMPI_N	0.96
PF12840	HTH_20	0.96
PF02574	S-methyl_trans	0.96
PF12850	Metallophos_2	0.96
PF00376	MerR	0.96
PF12867	DinB_2	0.96
PF12698	ABC2_membrane_3	0.96
PF12833	HTH_18	0.96
PF13855	LRR_8	0.96
PF02661	Fic	0.96
PF13401	AAA_22	0.96
PF13466	STAS_2	0.96
PF02801	Ketoacyl-synt_C	0.96
PF08021	FAD_binding_9	0.96
PF04454	Linocin_M18	0.96
PF01451	LMWPc	0.96
PF01243	Putative_PNPOx	0.96
PF13803	DUF4184	0.96
PF04542	Sigma70_r2	0.96
PF00903	Glyoxalase	0.96
PF13474	SnoaL_3	0.96
PF00582	Usp	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	5.77
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	5.77
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	5.77
COG0543	NAD(P)H-flavin reductase	Energy production and conversion [C]	1.92
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.96
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.96
COG1018	Flavodoxin/ferredoxin--NADP reductase	Energy production and conversion [C]	0.96
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.96
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.96
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.96
COG2162	Arylamine N-acetyltransferase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.96
COG2375	NADPH-dependent ferric siderophore reductase, contains FAD-binding and SIP domains	Inorganic ion transport and metabolism [P]	0.96
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	0.96
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.96

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	76.92 %
Unclassified	root	N/A	23.08 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.96 %
Unclassified	root	N/A	23.08 %
Viruses	superkingdom	All Organisms → Viruses	0.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.96 %
Unclassified	root	N/A	23.08 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	66.35 %
Unclassified	root	N/A	23.08 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	53.85 %
Unclassified	root	N/A	23.08 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	7.69 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	27.88 %
Unclassified	root	N/A	23.08 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.38 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	7.69 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	27.88 %
Unclassified	root	N/A	23.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1.92 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.92 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.92 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.96 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.96 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	23.08 %
Unclassified	root	N/A	23.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1.92 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	1.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Iamiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	23.08 %
Unclassified	root	N/A	23.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	1.92 %
Actinomarinicola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola	0.96 %
unclassified Nocardioidaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae	0.96 %
Marmoricola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	23.08 %
Unclassified	root	N/A	23.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Nonomuraea rubra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea rubra	1.92 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	0.96 %
Actinomarinicola tropica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	0.96 %
unclassified Marmoricola	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Name	Rank	Taxonomy	Distribution
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	23.08 %
Unclassified	root	N/A	23.08 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	7.69 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Nonomuraea rubra	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea rubra	1.92 %
Marmoricola sp. URHB0036	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola → Marmoricola sp. URHB0036	0.96 %
Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	0.96 %
Actinomarinicola tropica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.96 %
Promicromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	0.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.96 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_14471765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	792	Open in IMG/M
3300000787\|JGI11643J11755_11227401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	508	Open in IMG/M
3300000956\|JGI10216J12902_107695798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	583	Open in IMG/M
3300000956\|JGI10216J12902_114583703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1131	Open in IMG/M
3300004156\|Ga0062589_101082118	Not Available	757	Open in IMG/M
3300004157\|Ga0062590_101326482	Not Available	711	Open in IMG/M
3300004463\|Ga0063356_101044982	All Organisms → Viruses → Predicted Viral	1171	Open in IMG/M
3300004643\|Ga0062591_100117680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1767	Open in IMG/M
3300005184\|Ga0066671_10458832	All Organisms → cellular organisms → Bacteria	818	Open in IMG/M
3300005329\|Ga0070683_100604338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1050	Open in IMG/M
3300005332\|Ga0066388_100962620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Promicromonosporaceae	1423	Open in IMG/M
3300005337\|Ga0070682_100538744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	911	Open in IMG/M
3300005338\|Ga0068868_101781749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	581	Open in IMG/M
3300005535\|Ga0070684_100357348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1344	Open in IMG/M
3300005535\|Ga0070684_102116073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	531	Open in IMG/M
3300005543\|Ga0070672_101303369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	648	Open in IMG/M
3300005615\|Ga0070702_101092996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	637	Open in IMG/M
3300005618\|Ga0068864_102702481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	502	Open in IMG/M
3300005840\|Ga0068870_11155724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	559	Open in IMG/M
3300005843\|Ga0068860_102329160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	556	Open in IMG/M
3300005937\|Ga0081455_10709116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	640	Open in IMG/M
3300006038\|Ga0075365_10643393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	749	Open in IMG/M
3300006042\|Ga0075368_10121527	Not Available	1082	Open in IMG/M
3300006049\|Ga0075417_10040909	All Organisms → cellular organisms → Bacteria	1965	Open in IMG/M
3300006049\|Ga0075417_10076475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1488	Open in IMG/M
3300006051\|Ga0075364_10132565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1673	Open in IMG/M
3300006051\|Ga0075364_10724880	All Organisms → cellular organisms → Bacteria → Terrabacteria group	678	Open in IMG/M
3300006178\|Ga0075367_11099845	Not Available	508	Open in IMG/M
3300006844\|Ga0075428_100613233	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1162	Open in IMG/M
3300006844\|Ga0075428_101574217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	687	Open in IMG/M
3300006846\|Ga0075430_100834465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	759	Open in IMG/M
3300006852\|Ga0075433_11488747	All Organisms → cellular organisms → Bacteria → Terrabacteria group	585	Open in IMG/M
3300006853\|Ga0075420_100997203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	721	Open in IMG/M
3300006854\|Ga0075425_101625310	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300006880\|Ga0075429_100523848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1039	Open in IMG/M
3300009094\|Ga0111539_10871818	Not Available	1047	Open in IMG/M
3300009095\|Ga0079224_102168103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	790	Open in IMG/M
3300009095\|Ga0079224_104106842	Not Available	574	Open in IMG/M
3300009100\|Ga0075418_10256279	Not Available	1863	Open in IMG/M
3300009100\|Ga0075418_10576225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1210	Open in IMG/M
3300009100\|Ga0075418_12285040	Not Available	590	Open in IMG/M
3300009162\|Ga0075423_11024702	Not Available	877	Open in IMG/M
3300009174\|Ga0105241_11305169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	691	Open in IMG/M
3300009551\|Ga0105238_12085455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	601	Open in IMG/M
3300009642\|Ga0123331_1145715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	731	Open in IMG/M
3300009656\|Ga0123329_1034328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2447	Open in IMG/M
3300009659\|Ga0123328_1166927	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300009868\|Ga0130016_10475853	Not Available	806	Open in IMG/M
3300009870\|Ga0131092_10036590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7013	Open in IMG/M
3300010041\|Ga0126312_10922302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Iamiaceae → Actinomarinicola → Actinomarinicola tropica	637	Open in IMG/M
3300010051\|Ga0133939_1114649	Not Available	1434	Open in IMG/M
3300012212\|Ga0150985_103063251	Not Available	550	Open in IMG/M
3300013306\|Ga0163162_12144436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → unclassified Nocardioidaceae → Nocardioidaceae bacterium	641	Open in IMG/M
3300014326\|Ga0157380_12101911	Not Available	628	Open in IMG/M
3300015371\|Ga0132258_10738761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2479	Open in IMG/M
3300015372\|Ga0132256_102834129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	583	Open in IMG/M
3300015372\|Ga0132256_103259428	Not Available	546	Open in IMG/M
3300015373\|Ga0132257_100783961	All Organisms → cellular organisms → Bacteria	1189	Open in IMG/M
3300017792\|Ga0163161_10137665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1847	Open in IMG/M
3300017792\|Ga0163161_10641580	All Organisms → cellular organisms → Bacteria → Terrabacteria group	879	Open in IMG/M
3300017965\|Ga0190266_10424407	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300018422\|Ga0190265_11403913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	813	Open in IMG/M
3300018465\|Ga0190269_10182074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1120	Open in IMG/M
3300018465\|Ga0190269_11554471	Not Available	548	Open in IMG/M
3300018466\|Ga0190268_11049345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	656	Open in IMG/M
3300018476\|Ga0190274_12742418	Not Available	589	Open in IMG/M
3300018481\|Ga0190271_10019899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5140	Open in IMG/M
3300018481\|Ga0190271_10724410	Not Available	1118	Open in IMG/M
3300018481\|Ga0190271_11045053	Not Available	941	Open in IMG/M
3300018481\|Ga0190271_12480334	Not Available	621	Open in IMG/M
3300018481\|Ga0190271_13882205	Not Available	500	Open in IMG/M
3300019356\|Ga0173481_10013176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2384	Open in IMG/M
3300019356\|Ga0173481_10086256	Not Available	1173	Open in IMG/M
3300019377\|Ga0190264_10226358	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300019377\|Ga0190264_12262967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	509	Open in IMG/M
3300023265\|Ga0247780_1114333	All Organisms → cellular organisms → Bacteria → Terrabacteria group	713	Open in IMG/M
3300025924\|Ga0207694_11770645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	519	Open in IMG/M
3300025927\|Ga0207687_10778428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	815	Open in IMG/M
3300026023\|Ga0207677_10356274	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1228	Open in IMG/M
3300026023\|Ga0207677_10365954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1213	Open in IMG/M
3300026121\|Ga0207683_11715595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	577	Open in IMG/M
3300027866\|Ga0209813_10128124	Not Available	890	Open in IMG/M
3300027880\|Ga0209481_10162426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1106	Open in IMG/M
3300027907\|Ga0207428_10543743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	840	Open in IMG/M
3300027909\|Ga0209382_11629377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	637	Open in IMG/M
3300027910\|Ga0209583_10638628	All Organisms → cellular organisms → Bacteria → Terrabacteria group	547	Open in IMG/M
3300028041\|Ga0247719_1068325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	932	Open in IMG/M
3300028589\|Ga0247818_11381864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	507	Open in IMG/M
3300028590\|Ga0247823_10301299	All Organisms → cellular organisms → Bacteria	1212	Open in IMG/M
3300028590\|Ga0247823_11088166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	599	Open in IMG/M
3300028592\|Ga0247822_10754507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	790	Open in IMG/M
3300028608\|Ga0247819_10644855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea rubra	642	Open in IMG/M
3300028802\|Ga0307503_10749963	Not Available	553	Open in IMG/M
3300028889\|Ga0247827_10437760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea rubra	803	Open in IMG/M
3300031228\|Ga0299914_10961406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	700	Open in IMG/M
3300031455\|Ga0307505_10208757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	902	Open in IMG/M
3300031548\|Ga0307408_102304083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	522	Open in IMG/M
3300031901\|Ga0307406_10157327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1629	Open in IMG/M
3300031903\|Ga0307407_10134602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Marmoricola → unclassified Marmoricola → Marmoricola sp. URHB0036	1586	Open in IMG/M
3300031911\|Ga0307412_11198879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	680	Open in IMG/M
3300031995\|Ga0307409_102644363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	530	Open in IMG/M
3300032002\|Ga0307416_100746603	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300032013\|Ga0310906_10642931	Not Available	735	Open in IMG/M
3300032075\|Ga0310890_11739140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	518	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.00%
Environmental	Environmental	44.23%
Engineered	Engineered	5.77%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.00%
Terrestrial	Environmental → Terrestrial	43.27%
Wastewater	Engineered → Wastewater	2.88%
Bioreactor	Engineered → Bioreactor	2.88%
Aquatic	Environmental → Aquatic	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	42.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.42%
Roots	Host-Associated → Plants → Roots	5.77%
Anaerobic	Engineered → Bioreactor → Anaerobic	2.88%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.92%
Sediment	Environmental → Aquatic → Sediment	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	26.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.58%
Loam	Environmental → Terrestrial → Soil → Loam	5.77%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.88%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	2.88%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%
Petrochemical	Engineered → Wastewater → Industrial Wastewater → Petrochemical	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	26.92%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.58%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.69%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	5.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.88%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	2.88%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.31%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.69%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	5.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.88%
Anaerobic Biogas Reactor	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Biogas Reactor	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.96%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.96%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.96%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Industrial Wastewater	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009642	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R2_B C13 SIP DNA	Engineered	Open in IMG/M
3300009656	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_B C12 SIP DNA	Engineered	Open in IMG/M
3300009659	Anaerobic biogas reactor microbial communites from Washington, USA - Biogas_R1_A C12 SIP DNA	Engineered	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010051	Industrial wastewater microbial communities from reactors of effluent treatment plant in South Killingholme, Immingham, England. Combined Assembly of Gp0151195, Gp0151196	Engineered	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300023265	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L079-202R-5	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028041	Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-1-E_D	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_144717652	3300000363	Soil	MVPVLVFFGVATLVGCLFRGIVGLRLRAVARQPDVSDGELCELRQANRITSVTLIASLVGLAVVGLAYLIV*
JGI11643J11755_112274011	3300000787	Soil	MVPVLVFFGVATLVGCLFRGIXXLRLRAVARQPDVSDGELCELKQANRITSVTLIASLVGLAVVGLAYLIF*
JGI10216J12902_1076957982	3300000956	Soil	MVPVLVFFGVATLFGCLFRAVVALRLRAVARRPDVSDGELCELKHANRITSVAVVASLVGTAVVGLVSIATWVE*
JGI10216J12902_1145837032	3300000956	Soil	MVPVLVFFCVAALFGCLFRGVVGLRLRAAARQPDVSDGELCQLRQANRITSVAVIASLVGLAVVALAYVVL*
Ga0062589_1010821182	3300004156	Soil	MVPVLVFFGVAILLGCLIRGIVGLRLRAVARKPDVSDGELCELKQANRITLVAIVSSLVGLAVAGLAYVVLSVE*
Ga0062590_1013264821	3300004157	Soil	MVPVLVFFGVAILLGCLIRVIVGLRLRAVARKPDVSDGELCELKQANRITLVAIVSSLVGLAVAGLAYVVLSVE*
Ga0063356_1010449822	3300004463	Arabidopsis Thaliana Rhizosphere	MVSLLVFFGVATLFGCLFRGIVVLRLRAAARQPDASDGELCELKQANRITSVAVISSLLGLAVVGLAYVVLSVE*
Ga0062591_1001176803	3300004643	Soil	MVPVLVFFGIATLFGCLFRGIVWLRRRAVARQPDMPEGELCELKQANRITSVAIIASLVGLAVVGMAYVVFSVE*
Ga0066671_104588322	3300005184	Soil	MLMVPVLVFFGIATLVGCMVLAIVALRLRASARRPQASDAELCELKQANRISSVAVVASLGGLAVAGLAYAIFEWSG*
Ga0070683_1006043384	3300005329	Corn Rhizosphere	LGGLLMVPVLVFFGVAILLGCLIRVIVGLRLRAVARKPDVSDGELCELKQANRITLVAIVSSLVGLAVAGLAYVVLSVE*
Ga0066388_1009626201	3300005332	Tropical Forest Soil	VRTRGMMNRMPVLVFFGVATLIGCLIRGIVGLRLRAVARQPDASDGDLCELEQANRITSVAVIASLVGLAVVGLAYLVFSVD*
Ga0070682_1005387441	3300005337	Corn Rhizosphere	RLMVSLLVFFGVATLFGCLFRGIVVLRLRAAARQPDASDGELCELKQANRITSVAVIASLVGLAVIGLAYMVF*
Ga0068868_1017817492	3300005338	Miscanthus Rhizosphere	FGVAALFGCLFRGIVGLRLRAVARRPDASDGELCELKQANRITSVAVIASLVGLAVIGLAYMVF*
Ga0070684_1003573482	3300005535	Corn Rhizosphere	MVPVLVFFGVATLFGCLFRAIAALRLRAATRRRDASDGELCELKQANRITSIAVVASLVGTAVVGLAYMTFWVE*
Ga0070684_1021160732	3300005535	Corn Rhizosphere	MVPVLVFFGVAILLGCLIRGVVGLRLRAVARKPDVSDGELCELKQANRITSVAIVSSLVGLTVAGLAYLVLSVE*
Ga0070672_1013033692	3300005543	Miscanthus Rhizosphere	MVSLLVFFGVATLFGCLFRGIVVLRLRAAARQPDASDGELCELKQANRITSVAVIASLVGLAVIGLAYMVF*
Ga0070702_1010929961	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MVPVLVFFGVATLFACLFRGIVGLRLRAVARQPDVSDGELCELKQANRITSVAVIASLVGLAVVGLAYVAFGVE*
Ga0068864_1027024811	3300005618	Switchgrass Rhizosphere	MGPVLVFFGVATLFGCLFRGIVGLRLRAVARRPDASDGELCELKQANRITSVAVIASLVGLAVIGLAYMVF*
Ga0068870_111557242	3300005840	Miscanthus Rhizosphere	MGPVLVFFGVAALFGCLFRGIVGLRLRAVARRPDASDGELCELKQANRITSVAVIGSLVGLAVIGLAYMVF*
Ga0068860_1023291602	3300005843	Switchgrass Rhizosphere	MGPVLVFFGVAALFGCLFRGIVGLRLRAVARRPDASDGELCELKQANRITSVAVIASLVGLAVIG
Ga0081455_107091162	3300005937	Tabebuia Heterophylla Rhizosphere	LLMVPVLVFFGVATLVGLLFRGIAGLRLRAVARQPDVSDGELCELRQANRITSVALIASLVGLAVVGLAYLVL*
Ga0075365_106433931	3300006038	Populus Endosphere	MVPVLVFFGVAILVGCLIRGIVGLRLRAVARKPDVSDGELCELKQANRITSVAIVSSLVGLAVAGLAYVVLSVE*
Ga0075368_101215273	3300006042	Populus Endosphere	MVPVLVFLAVAAIIGCLIRAIVGLRLRAVARRPDVSDGELCELKQGNRISSLTVLAALVGLALVGLVLILL*
Ga0075417_100409094	3300006049	Populus Rhizosphere	MVPALVFFGVATLLGCLFRGIVRLRLRAVARQPDVSDGELCELKQANRITSVAVVASLVGLAAVGLAYLVF*
Ga0075417_100764752	3300006049	Populus Rhizosphere	MVPALVFFGVATLIGCLFRGIVGLRLRAVARQPDVSDGELCELKQANRITSVAVIASLVGLAVVGLAYLVF*
Ga0075364_101325653	3300006051	Populus Endosphere	MVPVLVFFGVAALVGCLIRAIVGMRLRAASRQPDVSDGELCQLEQATRISSVAVIASLIGLAVVGLALVLI*
Ga0075364_107248802	3300006051	Populus Endosphere	MVPVLVFFAVASVVGCLIGGIVRLRLRAAARQPGASDEDLCELRQANRITSVAAVASLVGLAVAALVLVAV*
Ga0075367_110998452	3300006178	Populus Endosphere	VPVLVFFAVASVVGCLIGGIVRLRLRAAARQPGASDEDLCELRQANRITSVAAVASLVGLAVAALVLVAV*
Ga0075428_1006132331	3300006844	Populus Rhizosphere	MVPVLVFFAVATLLGCLFRGIAGLRLRAVSRQPDVSDGELCELKQANRITSVAVIASLVGLAVVGLAYLVL*
Ga0075428_1015742172	3300006844	Populus Rhizosphere	MVPALVFFGVATLIGCLFRGIVGLRLRAVARQPDVSDGELCELKQANRITSVAVIASLVGLALVGLAYLVF*
Ga0075430_1008344653	3300006846	Populus Rhizosphere	VFFGVATLLGCLFRGIVRLRLRAVARQSDVSDGELCELKQANRITSVAVVASLVGLAAVGLAYLVF*
Ga0075433_114887471	3300006852	Populus Rhizosphere	MVPVLVFFGVAILVGCLIRGIVGLRLRAVARKPDVSGGQLCELKQANRITSVAIVSSLVGLAVAGLAYVVLSVE*
Ga0075420_1009972032	3300006853	Populus Rhizosphere	MVPALVFFGVATLFGCLFRGIVGLRLRAVARQPDVSDGELCELKQANRITSVAVIASLVGFAVVGLAYVVFWVE*
Ga0075425_1016253102	3300006854	Populus Rhizosphere	MVPALVFFGVATVLGCLFRGIVGLRLRAVARQPDVSDGELCELEQANRITSVAVVASLLGLAAVGLAYLVFSVE*
Ga0075429_1005238482	3300006880	Populus Rhizosphere	MVPVLVFFGVAILLGCLIRGIVGLRLRAVARKPDVSDGQLCELKQANRITSVAIVSSLVGLAVAGLAYVVLSVE*
Ga0111539_108718182	3300009094	Populus Rhizosphere	MVPVLVFFGVATLLGCLFRGIAGLRLRAVARQPDVSDGELCELKQASRITSVAVLTSLVGLAVVGLAYVVF*
Ga0079224_1021681032	3300009095	Agricultural Soil	MVPVLVFFGIATLVGLLLRGIVSLRLRTAARQPDASDGDLCQLRQANRITSVAVVASLVALAVIGLAYAVL*
Ga0079224_1041068422	3300009095	Agricultural Soil	VTPVLVFFGIAAVIGIVIVTIVRLRLRAASQQPDVSEEQLCELRKANRISSTAAVASVAGLVVVAVVLVVL*
Ga0075418_102562792	3300009100	Populus Rhizosphere	MVPVLVFFGVAILLGCLIRGIVGLRLRAVARKPDVSDGELCELKQANRITSVAIVSSLVGLAVVGLTYVVLSVE*
Ga0075418_105762253	3300009100	Populus Rhizosphere	RLLMVPALVFFGVATLIGCLFRGIVGLRLRAVARKPDVSDGELCELKQANRITSVAIVSSLVGLAVAGLAYVVLSVE*
Ga0075418_122850401	3300009100	Populus Rhizosphere	LLGCLFRGIAGLRLRAVSRQPDVSAGELCELKQANRITSVAVIASLVGLAVVGLAYLVF*
Ga0075423_110247022	3300009162	Populus Rhizosphere	MVPVLVFFAVATLLGCLFRGIAGLRLRAVSRQPDVSAGELCELKQANRITSVAVIASLVGLAVVGLAYLVF*
Ga0105241_113051692	3300009174	Corn Rhizosphere	GVATLFGCLFRGIVGLRLRAVARRPDASDGELCELKQANRITSVAVIASLVGLAVIGLAYMVF*
Ga0105238_120854552	3300009551	Corn Rhizosphere	MGPVLVFFGVAALFGCLFRGIVGLRLRAVARRPDASDGELCELKQANRITSVAVIASLVGLAVIGLAYMVF*
Ga0123331_11457152	3300009642	Anaerobic Biogas Reactor	MAPVLVFLGIAALVGCLIRVGVEVRLRAASRRPDVTDGDLCELKQANRISSLAVAASVAGIAAVGLVYVVVRLV*
Ga0123329_10343282	3300009656	Anaerobic Biogas Reactor	MAPVLVFLGIAALVGCLIRVGVEVRLRAASRRPDVTDGDLCELKQANRISSLAVAASVAGIAAVGLIYVVVRLV*
Ga0123328_11669272	3300009659	Anaerobic Biogas Reactor	MAPVLVFLGIAALVGCLIRVGVEVRLRAASRRPDVTDGDLCELKQANRISSLAVAASVAGIA
Ga0130016_104758532	3300009868	Wastewater	VIVPVLVFFGIATLAGILLRGVIGKRLRAAARQPGVSEDDLCELKQANRISSAAVIASLGALAVVGLAYVLI*
Ga0131092_100365907	3300009870	Activated Sludge	MVRLLVFFGIAALIGCAIWVVVARRLRAVARQPDVAEGDLCQLEQAHRISSVAVVASLVGLALVGLLYVVF*
Ga0126312_109223022	3300010041	Serpentine Soil	MVPVLVFFGVATLFGCVVRGIVELRLRAVARQPDVSDGDLCQLEQANRITSVAVIASLIGIAVVGLAYLVF*
Ga0133939_11146492	3300010051	Industrial Wastewater	MRAALVFFGIATLIGCLIRGVVELRIRRTVARQPDIAEGELCELRQANRITSVAVIASLVGLAVVALVYAAVGSE*
Ga0150985_1030632511	3300012212	Avena Fatua Rhizosphere	NRGARLLMVPVLVFFGVAALVGCLFRGIVRLRLRAVARQPDVSEGDLCQLEQANRITSVAVIASLVGLAVIGLAYVVF*
Ga0163162_121444361	3300013306	Switchgrass Rhizosphere	MVPVLVFFGVATLFACLFRGIVGLRLRAVARQPDVSDGELCQLKQANRITSVAVIASLVGLAVIGLAYVVF*
Ga0157380_121019112	3300014326	Switchgrass Rhizosphere	MVPVLVFFGVAALLGCLFRGIVGLRLRAVARQPEVSEGELCQLKQANRITSVAVIASLVGLAFIGLAYVVFGVE*
Ga0132258_107387613	3300015371	Arabidopsis Rhizosphere	MVPVLVFFGVATLFGCLFRGIVWLRLRAAARRPEVSDGELCELKQANRITSFAVIASLVGLGAAGLAYVVFLVE*
Ga0132256_1028341292	3300015372	Arabidopsis Rhizosphere	PVLVFFGVAILFGCLIRGIVGLRLRAAARKPDVSDGELCELKQANRITSVAVIASLVGLAVVGLAYVAFGVE*
Ga0132256_1032594281	3300015372	Arabidopsis Rhizosphere	MMRRANSAVGGLPVVPVLVFFGVATLVGCLVRGIVWLRLRAVAREPDVPNGQPCELKQANRITSVAVIASLVGLAVVGVAYVLFSVE*
Ga0132257_1007839612	3300015373	Arabidopsis Rhizosphere	MVPVLVFFGVATLFACLFRGIVGLRLRAVARQPDVSDGELCELKQANRITSVAVIASLVGLAVIGLAYVVFGVE*
Ga0163161_101376653	3300017792	Switchgrass Rhizosphere	MGPVLVFFGVATLFGCLFRGIVGLRLRAVARRPDASDGELCELKQANRITSVAVIASLVGLAVIGLAYMVF
Ga0163161_106415801	3300017792	Switchgrass Rhizosphere	MVPVLVFFGVATLFGCLFRGIVGPRLRAVARQPDASDGELCELKQANRITSVAVIASLVGLAVVGLAYVAFGVE
Ga0190266_104244071	3300017965	Soil	MVPVLVFFGVATLIGCLFRGIVGLRLRAVARQPDVSDGELCQRKQANRITSVAVVASLVGLAVVGLAYVVL
Ga0190265_114039132	3300018422	Soil	MVTVLVFFGVATLFGCLFRGIVGLRLRAAARQPDVSDGELCELEQANRITSVAVITSLVGLAVVGLAYVVF
Ga0190269_101820743	3300018465	Soil	MVQVLVFFGVAALFGLLFRGIVRLRLRAAARQPEVSDGDLCELRQANRITSIAVSASLVGLGVAALASVVAAVAD
Ga0190269_115544711	3300018465	Soil	MVPALVFFGIATLVGCVILAIVGLRLRAAARQPEVSDAELCELRQANRISSVAVIASVAGLVVVGLAFVLF
Ga0190268_110493451	3300018466	Soil	MVPVLVFFGVATLVGCLFRGIVGLGLRAVARQPDVSDGELCELKQANRITSVAVIASLVGLAVVGLAYVVFSVE
Ga0190274_127424181	3300018476	Soil	MMRPMEPLLVFFGIATLFGCLFRGIAWLRLRAAAGEPGVSDGDLCQLQQANRISSIAVVASVVGLAVLGLAYVVL
Ga0190271_100198994	3300018481	Soil	MVPALVFFGVAALFGCLFRGIVWLRLRSVARRSDVSDGELCELKQANRITSIALIASLVGLAVGGLVYAVVWVE
Ga0190271_107244102	3300018481	Soil	MVPVLVFFGVATLVGCLILVIVRLRLRAAARQPEVSDGELCQLQQANRISSVAVIASLVGLAVVGLVFVVLSVA
Ga0190271_110450532	3300018481	Soil	MVPVLAFFGIAALFGCLIRGIVGLRLRAVARRSDVSDGELCELEQANRISSVTLAASLVSLAVVGLVYAVV
Ga0190271_124803342	3300018481	Soil	MVPVLAFFGVATLVGLLIRAVVGLRLRAAAEQPDPSEAEVCQLQQANRISSVAVIASLAGLALVGLAYLAL
Ga0190271_138822052	3300018481	Soil	MSRVTLPIGERLLMMPVLVFLGAAALIGCLIRGIVGLRLRAVARQSDVSEGELCELRQANRITSAAVVASLVGLAVVGLV
Ga0173481_100131761	3300019356	Soil	MVPVLVFFGVAALFGCLFRGIVGLRLRAVARKPDVSDGELCELKQANRITLVAIVSSLVGLAVAGLAYVVLSVE
Ga0173481_100862562	3300019356	Soil	MVPVLVFFGVAILLGCLIRGVVGLRLRAVARKPDVSDGELCELKQANRITLVAIVSSLVG
Ga0190264_102263581	3300019377	Soil	MVPVLVFLGVAALIGCLLRGIVRLRLRAASRRSDAPGAELCELKQASRITSVAVVASLVGLAVVGLGTAVFE
Ga0190264_122629671	3300019377	Soil	MVPVLVFFGVATLFGCLFRGIVGLRLRAVARQPDVSDGELCELKQANRITSVAVVASLVGLAVIGLAYAVF
Ga0247780_11143332	3300023265	Plant Litter	LLGCLIRGIVGLRLRAVARKPDVSDGELCELKQANRITLVAIVSSLVGLAVAGLAYVVLSVE
Ga0207694_117706451	3300025924	Corn Rhizosphere	FGVATLFGCLFRGIVGLRLRAVARRPDASDGELCELKQANRITSVAVIASLVGLAVIGLAYMVF
Ga0207687_107784282	3300025927	Miscanthus Rhizosphere	MVPVLVFFGVAILLGCLIRGIVGLRLRAVARKPDVSDGELCELKQANRITLVAIVSSLVGLAVAGLAYVVLSVE
Ga0207677_103562742	3300026023	Miscanthus Rhizosphere	MVPVLVFFGVAILLGCLIRGVVGLRLRAVARKPDVSDGELCELKQANRITSVAIVSSLVGLAVAGLAYLVLSVE
Ga0207677_103659543	3300026023	Miscanthus Rhizosphere	FGVAALFGCLFRGIVGLRLRAVARRPDASDGELCELKQANRITSVAVIASLVGLAVIGLAYMVF
Ga0207683_117155951	3300026121	Miscanthus Rhizosphere	MGPGLVFFGVATLFGCLFRGIVGLRLRAVARRPDASDGELCELKQANRITSVAVIASLVGLAVIGLAYMVF
Ga0209813_101281242	3300027866	Populus Endosphere	MVPVLVFLAVAAIIGCLIRAIVGLRLRAVARRPDVSDGELCELKQGNRISSLTVLAALVGLALVGLVLILL
Ga0209481_101624263	3300027880	Populus Rhizosphere	MVPALVFFGVATLIGCLFRGIVGLRLRAVARQPDVSDGELCELKQANRITSVAVIASLVGLALVGLAYLVF
Ga0207428_105437434	3300027907	Populus Rhizosphere	VPALVFFGVATLIGCLFRGIVGLRLRAVARQPDVSDGELCELKQANRITSVAVIASLVGLALVGLAYLVF
Ga0209382_116293771	3300027909	Populus Rhizosphere	GVATLFGCLFRGIVGLRLRAVARQPDVSDGELCELKQANRITSVAVIASLVGLAVVGLAYVLF
Ga0209583_106386282	3300027910	Watersheds	LVFFGVAALFGCLFRGIVRLRLRAVARQPDVSDGDLCELEQANRITSVSVIASLVGLAIVGLAYVVV
Ga0247719_10683252	3300028041	Soil	MTPVLVFFAVAALVGCLLRVVVGLRLRAATRRPDVADAEVCSLRQANRITSGAVLASLVGLAVAGLALVLVS
Ga0247818_113818641	3300028589	Soil	MVPVLVFFGVATLFGCLFLGIVRLRLRAVARQPDVSDGELCELKQANRITSVAVVASLVGLAVVGLAYVVFSVE
Ga0247823_103012991	3300028590	Soil	MVPVLVFFAVATLVGCLIRGVVMLRLRAAARQPDVSDGDLCQLRQANRISSMAVVVSLVAFVAIGVAFVTL
Ga0247823_110881661	3300028590	Soil	MVPVLVFFGVATVVGCLIRGLVGLRLRAAARQPDVSDGDLCELRQANRISSVALVVSLVGLAVIAVTYAVIALD
Ga0247822_107545071	3300028592	Soil	MVPVLVFLGLATLLGCLFRGIVGLRLRAAARQPDVSDGELCQLQQANRITSVTVIASLVGLAV
Ga0247819_106448551	3300028608	Soil	MVSVLVFFGVAILLGCLIRGIVGLRLRAVARKPDVSDGELCELKQANRITSVAIVSSLVGLAVAGLAYVVLSVE
Ga0307503_107499632	3300028802	Soil	ANNSAGWGACLLMVPALVFFGVATLIGCLVLGFVGLRLRVVARQPDVSDLELCELKQANRITSVAVIASLVGLAVVGLLYVVL
Ga0247827_104377602	3300028889	Soil	MVPVLVFFGVAILLGCLIRGIVGLRLRAVARKPDVSDGELCELKQANRITSVAIVSSLVGLAVAGLAYVVLSVE
Ga0299914_109614062	3300031228	Soil	MGAALVFFGIATLVGCLFRGIVELRIRRAVARQPDIADGELCELKQANRITSVAVIASLVGLAVVALVYVVV
Ga0307505_102087571	3300031455	Soil	MVPVLVFFGVATLVGFLIRGIVGLRLRAVARQPDVSDEDLCGLEQANRISSIAVIASLAGLAVVGLTYVVFRLF
Ga0307408_1023040831	3300031548	Rhizosphere	MVPVLVFFGVATLIGCLFRGIVGLRLRAVAREPDVSDGELCELKQANRITSVAAIASLVGLAVVGLAYVVFSVE
Ga0307406_101573271	3300031901	Rhizosphere	MVPVLVFFGVATLIGCLFRGIVGLRLRAIAREPDVSDGKLCELKQANRITSVAAIASLVGLAVVGLAYVVFSVE
Ga0307407_101346023	3300031903	Rhizosphere	MVPVLVFFGVATLIGCLFRGIVGLRLRALAREPDVSDGELCELKQANRITSVAAIASLVGLAVVGLAYVVFSVE
Ga0307412_111988792	3300031911	Rhizosphere	ALSRLGGLLMVPVLVFFGVATLIGCLFRGIVGLRLRAVAREPDVSDGELCELKQANRITSVAAIASLVGLAVVGLAYVVFSVE
Ga0307409_1026443631	3300031995	Rhizosphere	MVPVLVFFGVATLIGCLFRGIVGLRLRAVAREPDVSDGELCELKQANRITSVAAIASLVG
Ga0307416_1007466032	3300032002	Rhizosphere	MVPVLVFFGLATLVGCLFRGIVGLRLRAIAREPDVSDGKLCELKQANRITSVAAIASLVGLVVVGLAYVVFSVE
Ga0310906_106429312	3300032013	Soil	LVFFGVAALFGCLFRGIVTLRLRAVARQPDVSDGELCELRHANRITSVAVLASLVGLAVVGLAYVVF
Ga0310890_117391402	3300032075	Soil	MLPILVFFGVATLFGCLFRGIVRSRLRAVARQPDASDGELCELKQANRITSVAVIASLVGLAVAGLAYV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097671

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences