 |
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F097658 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 104 |
| Average Sequence Length | 68 residues |
| Representative Sequence | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLQWTPMEESVCAQEMYAEVGS |
| Number of Associated Samples | 81 |
| Number of Associated Scaffolds | 104 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 91.35 % |
| % of genes near scaffold ends (potentially truncated) | 14.42 % |
| % of genes from short scaffolds (< 2000 bps) | 92.31 % |
| Associated GOLD sequencing projects | 78 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.43 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (83.654 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (36.538 % of family members) |
| Environment Ontology (ENVO) | Unclassified (39.423 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (64.423 % of family members) |
| ⦗Top⦘ |
| ⦗Top⦘ |
| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 18.75% β-sheet: 5.21% Coil/Unstructured: 76.04% | Feature Viewer |
|
|
|||||
| Powered by Feature Viewer | |||||
| Structure Viewer | |
|---|---|
|
| |
| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.43 |
| Powered by PDBe Molstar | |
| ⦗Top⦘ |
| Pfam ID | Name | % Frequency in 104 Family Scaffolds |
|---|---|---|
| PF08281 | Sigma70_r4_2 | 4.81 |
| PF02518 | HATPase_c | 3.85 |
| PF03051 | Peptidase_C1_2 | 2.88 |
| PF00128 | Alpha-amylase | 1.92 |
| PF04542 | Sigma70_r2 | 1.92 |
| PF00072 | Response_reg | 0.96 |
| PF02776 | TPP_enzyme_N | 0.96 |
| PF01035 | DNA_binding_1 | 0.96 |
| PF03372 | Exo_endo_phos | 0.96 |
| COG ID | Name | Functional Category | % Frequency in 104 Family Scaffolds |
|---|---|---|---|
| COG3579 | Aminopeptidase C | Amino acid transport and metabolism [E] | 2.88 |
| COG0296 | 1,4-alpha-glucan branching enzyme | Carbohydrate transport and metabolism [G] | 1.92 |
| COG0366 | Glycosidase/amylase (phosphorylase) | Carbohydrate transport and metabolism [G] | 1.92 |
| COG0568 | DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) | Transcription [K] | 1.92 |
| COG1191 | DNA-directed RNA polymerase specialized sigma subunit | Transcription [K] | 1.92 |
| COG1523 | Pullulanase/glycogen debranching enzyme | Carbohydrate transport and metabolism [G] | 1.92 |
| COG1595 | DNA-directed RNA polymerase specialized sigma subunit, sigma24 family | Transcription [K] | 1.92 |
| COG3280 | Maltooligosyltrehalose synthase | Carbohydrate transport and metabolism [G] | 1.92 |
| COG4941 | Predicted RNA polymerase sigma factor, contains C-terminal TPR domain | Transcription [K] | 1.92 |
| COG0350 | DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase) | Replication, recombination and repair [L] | 0.96 |
| COG3695 | Alkylated DNA nucleotide flippase Atl1, participates in nucleotide excision repair, Ada-like DNA-binding domain | Transcription [K] | 0.96 |
| ⦗Top⦘ |
| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 83.65 % |
| All Organisms | root | All Organisms | 16.35 % |
| Visualization |
|---|
| Powered by ApexCharts |
| ⦗Top⦘ |
| Habitat | Taxonomy | Distribution |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 36.54% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 13.46% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 12.50% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 5.77% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 3.85% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 3.85% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 3.85% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.88% |
| Soil | Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil | 1.92% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.92% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.92% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 1.92% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 1.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.96% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.96% |
| Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 0.96% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.96% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.96% |
| Tropical Rainforest Soil | Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil | 0.96% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000550 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly | Environmental | Open in IMG/M |
| 3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
| 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005713 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2) | Environmental | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Host-Associated | Open in IMG/M |
| 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Host-Associated | Open in IMG/M |
| 3300006049 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 | Host-Associated | Open in IMG/M |
| 3300006194 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 | Host-Associated | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Host-Associated | Open in IMG/M |
| 3300006935 | Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A10 (Metagenome Metatranscriptome) (version 2) | Environmental | Open in IMG/M |
| 3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009792 | Tropical forest soil microbial communities from Panama - MetaG Plot_12 | Environmental | Open in IMG/M |
| 3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010077 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010087 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010091 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010098 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010106 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_0_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010107 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010112 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_4_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010115 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010128 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010136 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010137 | Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010140 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010141 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010142 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010145 | Soil microbial communities from Hawaii, USA to study soil gas exchange rates - KP-HI-INT metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300012206 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG | Environmental | Open in IMG/M |
| 3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012375 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012377 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_8_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012382 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_4_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012386 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012388 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_2_24_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012391 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012395 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012396 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012397 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012400 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012401 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012402 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012403 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012405 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012406 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012409 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012410 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
| 3300018482 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118 | Environmental | Open in IMG/M |
| 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026330 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes) | Environmental | Open in IMG/M |
| 3300027873 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027880 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300027909 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300030552 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db7 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030621 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db8 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030783 | Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 3C (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300032076 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2) | Environmental | Open in IMG/M |
| 3300032261 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| F24TB_105576632 | 3300000550 | Soil | MPRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRRKEEEAWSQLLPWTPMGESVCAQEMYSEVGV* |
| Ga0058859_105598241 | 3300004798 | Host-Associated | MQRCPQCDIPLGDWSCPNPLCEEMHGQSAGDLCMWCHHKQEESWSQSLPWTLLGESVCAQEMCAEVGS* |
| Ga0065705_100513991 | 3300005294 | Switchgrass Rhizosphere | MPRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRRKEEESWSQLLPWTQMGESVCAQEMYSEVGV* |
| Ga0065707_100227913 | 3300005295 | Switchgrass Rhizosphere | MPRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRRKEEESWSQVLPWTPMGESVCAQEMYAEVGV* |
| Ga0066388_1007814642 | 3300005332 | Tropical Forest Soil | MPRCLQCDIPLGTWPCPNPLCPELHGQSAGDLCAWCRHKEEESWSQLLPWTSTGESVYAQEMYSEVGA* |
| Ga0066388_1046072181 | 3300005332 | Tropical Forest Soil | MPRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRRKEEESWSQVLPWTPLGESVCAQEMYAEVGV* |
| Ga0066905_1017973491 | 3300005713 | Tropical Forest Soil | MPRCLQCDIPLGTWPCPNPLCPELHGQSAGDLCAWCRHKEEESWSQLLPWTSTGESVYAQEMYAEVGA* |
| Ga0068861_1002378091 | 3300005719 | Switchgrass Rhizosphere | MPRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRRKEEESWSQVLPWTPMGESVCAQEIYAEVGV* |
| Ga0066903_1005005212 | 3300005764 | Tropical Forest Soil | MQHCPQCDIPLGAWPCPNPLCDELHGQSAGDLCVWCRHKQEEAWRQSSPWTPMEENVYASDQEMYSEVGS* |
| Ga0066903_1059387431 | 3300005764 | Tropical Forest Soil | MQRCLQCDIPLGPWPCPNPLCDELHGESAGDLCAWCRHKLEEAWSPSESWTTMEESVCVQEMYAEVGL* |
| Ga0066903_1074061291 | 3300005764 | Tropical Forest Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCVWCRHRQEESWSQSLSWASLEESVWAQEMYAEVGA* |
| Ga0081455_103532652 | 3300005937 | Tabebuia Heterophylla Rhizosphere | MPRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRRKEEESWSQLLPWTPMGESVCVQEMYSEVGV* |
| Ga0081538_1000403710 | 3300005981 | Tabebuia Heterophylla Rhizosphere | MQRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLLWIPIGESVGAQEMYSEVAS* |
| Ga0081540_10114103 | 3300005983 | Tabebuia Heterophylla Rhizosphere | MPRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRRKEEESWSQLLPWTPMGESVCAQEMYAEVGV* |
| Ga0075417_100610462 | 3300006049 | Populus Rhizosphere | MRRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLQWTPMEESVCAQEMYAEVGS* |
| Ga0075427_100038833 | 3300006194 | Populus Rhizosphere | MQRCARCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWTLMEQSVCAEEMYAEVGA* |
| Ga0075428_1008588621 | 3300006844 | Populus Rhizosphere | MQRCARCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWTLMEQSVCAEEM |
| Ga0075428_1023688131 | 3300006844 | Populus Rhizosphere | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHRQEESWSQSLSWTSMEESVCAQEMYAEVGA* |
| Ga0075434_1013621691 | 3300006871 | Populus Rhizosphere | DVMRRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWTLMEQSVCAEEMYAEVGA* |
| Ga0075434_1020787062 | 3300006871 | Populus Rhizosphere | AWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLQWTPMEESVCAQEMYAEVGS* |
| Ga0075429_1010580102 | 3300006880 | Populus Rhizosphere | MRRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCVWCRHKQEESWSQSLSWASIGESVWAQEMYAEVGS* |
| Ga0081246_13210742 | 3300006935 | Tropical Rainforest Soil | MQHCPQCDIPLGAWPCPNPLCDELHGQSAGDLCVWCRHKQEEAWRQSSPWTPMEENVYASDQEMYAEVGS* |
| Ga0111539_113255072 | 3300009094 | Populus Rhizosphere | MQRCSRCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWTLMEQSVCAEEMYAEVGA* |
| Ga0114129_129777951 | 3300009147 | Populus Rhizosphere | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWNQSLSWASIRESVWAQEMYAEVGS* |
| Ga0126374_100738902 | 3300009792 | Tropical Forest Soil | MQHCPQCDIPLGAWPCPNPLCDELHGQSAGDLCVWCRHKQEEAWRQSSPWTPIEENVYASDQEIYSEVGS* |
| Ga0126384_122263451 | 3300010046 | Tropical Forest Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGELCAWCRHREEESWSQALSWASIRESVWAQEMYAEVGS* |
| Ga0126382_106352172 | 3300010047 | Tropical Forest Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWDQSLSWASIRESVWAQEMYAEVGS* |
| Ga0127437_1409431 | 3300010077 | Grasslands Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCARCRHKQAESWSQSLSWTSIGESVWAQKMYAEVGS* |
| Ga0127437_1478361 | 3300010077 | Grasslands Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEEFWSQSWPWTPMGESVCPQESYAEVGA* |
| Ga0127492_10369732 | 3300010087 | Grasslands Soil | MQRCPQCDIPLGTWPCPNPLCDELHGESAGDLCAWCRHKLEEAWGQALPWTAMGEDVCVQEMYSEVG |
| Ga0127492_10686572 | 3300010087 | Grasslands Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGDLCTWCRHKLEEFWSQSWPWTPTGESVCPQESYAEVGA* |
| Ga0127485_10323802 | 3300010091 | Grasslands Soil | MQRCPQCDIPLGAWPCPNPLCDELHGESAGALCAWCRHKQEESWSQALPWTALGESIGVQEMCAEVGS* |
| Ga0127463_11283162 | 3300010098 | Grasslands Soil | MQRCPQCDIPLGAWPCPNPLCDELHGESAGDLCAWCRHKQEESWGQSLPWTALGESIGVQEMCAEVGS* |
| Ga0127472_10570522 | 3300010106 | Grasslands Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGALCAWCRHKLEEFWSQSWPWTPTGESVCPQESYAEVGA* |
| Ga0127494_11374371 | 3300010107 | Grasslands Soil | MQRCSRCDILLGAWPCPNPLCPELHGQSAGDLCVWCRHKQEESWSQSLSWTLMEESVCAQEMYAEVGS* |
| Ga0127458_10251232 | 3300010112 | Grasslands Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWTPIGESVCAQEMYSEVGA* |
| Ga0127458_11016481 | 3300010112 | Grasslands Soil | MQRCLQCDIPLGAWPCPNPLCDELHGESAGDLCAWCRHKLEEAWSQALPWTPIEESVCAQEMYAEVGL* |
| Ga0127495_10431222 | 3300010115 | Grasslands Soil | MQRCRQCDIPLGGWPCPNPLCPELHGQSAGDLCAWCRHKLEEFWSQSWPWTPTGESVCPQESYAEVGA* |
| Ga0127486_11306611 | 3300010128 | Grasslands Soil | MQRCPQCDIPLGTWPCPNPLCDELHGESAGDLCAWCRHKLEEAWGQALPWTAMGEDVCVQEMYSEVGS* |
| Ga0127447_11973552 | 3300010136 | Grasslands Soil | MQRCPQCDIPLGAWPCPNPLCDELHGESAGALCAWCRHKQEESWSQAFPWTALGESVGVQEMCAEVGS* |
| Ga0126323_10636592 | 3300010137 | Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCCHKQEESWRQASPWTPIEESVWAQEMYSEVGS* |
| Ga0127456_12112222 | 3300010140 | Grasslands Soil | MQRCSQCDIPLGAWPCPNPLCDELHGESAGALCAWCRHKQEESWSQALPWTALGESIGVQEMCAEVGS* |
| Ga0127499_11167441 | 3300010141 | Grasslands Soil | MQRCPQCDIPLGAWPCPNALCPELHGQSAGDLCAWCRHKQEESWSQSLPWTSIGENVGAQELYSEVGS* |
| Ga0127483_11566341 | 3300010142 | Grasslands Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEESWSPSLSWTSIRESVWAQEMYAEVGA* |
| Ga0126321_10925272 | 3300010145 | Soil | MQRCSQCDIPLGTWPCPNPLCPELHGQSVGDLCMWCRRRQEEAWGQSLSWTLMEEGVCAQEMYSEVGS* |
| Ga0126370_103617231 | 3300010358 | Tropical Forest Soil | MQRCIQCDIPLGAWPCPNPLCPELHGESAGDLCVWCRHEQDESWSESILWTSLGESVGAQELWAEVGS* |
| Ga0126376_104202753 | 3300010359 | Tropical Forest Soil | MPRCLQCDIPLGTWPCPNPLCPELHGQSAGDLCAWCRRKEEEAWSQLLPWTPLGESVCAQEMYAEVGV* |
| Ga0126372_104037311 | 3300010360 | Tropical Forest Soil | MPRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRRKEEESWSQGLPWTAMGESVCAQEMYAEVGV* |
| Ga0126372_110888951 | 3300010360 | Tropical Forest Soil | MQHCPQCDIPLGAWPCPNPLCDELHGQSAGDLCVWCRHEQDESWSESILWTSLGESVGAQELWAEVGS* |
| Ga0126377_104149362 | 3300010362 | Tropical Forest Soil | MPRCLQCDIPLGTWPCPNPLCPELHGQSAGDLCAWCRHKEKESWSQLLPWTSTGESVYAQEMYAEVGA* |
| Ga0126377_104376321 | 3300010362 | Tropical Forest Soil | MPRCLQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHRQEESWSQSLSWTLMEESVCAEETYAEVGA* |
| Ga0126377_109278312 | 3300010362 | Tropical Forest Soil | MPRCLQCDIPLGAWPCPNPLCPELHGQSAGDLCTWCRHKQEESWSQSLSWTLMEESVCTQEMYAEVGA* |
| Ga0126379_137177642 | 3300010366 | Tropical Forest Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWTLMEESVCTQEMYAEVGS* |
| Ga0126383_103807212 | 3300010398 | Tropical Forest Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWASLEESVWAQEMYAEVGA* |
| Ga0126383_118479162 | 3300010398 | Tropical Forest Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQASSWALMEESVCTQEMYAEVGA* |
| Ga0126383_129360381 | 3300010398 | Tropical Forest Soil | GDVMPRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKEEESWSQLLPWTSTAESVYAQEMYAEVGV* |
| Ga0137380_102152174 | 3300012206 | Vadose Zone Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEESWSQSLSWTSIRESVWAQEMYAEVGS* |
| Ga0137381_105154472 | 3300012207 | Vadose Zone Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEEFWSQSWPWTPMGESVCTQEIYAEVGA* |
| Ga0150985_1061714151 | 3300012212 | Avena Fatua Rhizosphere | MQRCPQCDIPLGDWSCPNEICQEMHGQSAGDLCMWCRHKQEESWGQSLPWKSIGESICAQEMYVEVGS* |
| Ga0150985_1125423472 | 3300012212 | Avena Fatua Rhizosphere | MQRCPQCDIPLGAWPCPNPLCDELHGESAGDLCAWCRHRLEESWSQSLPWTAMGEGVCVQEMYAEVGS* |
| Ga0150985_1185761445 | 3300012212 | Avena Fatua Rhizosphere | MQRCSRCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWTLTEQSVCAEEMYAEVGA* |
| Ga0150985_1191950182 | 3300012212 | Avena Fatua Rhizosphere | MRRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLQWTPMQESVCAKEMYAEVGS* |
| Ga0137360_113508381 | 3300012361 | Vadose Zone Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEEFWSQSWPWTPMGESVCTQEIYAGVGA* |
| Ga0137361_104566183 | 3300012362 | Vadose Zone Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEEFWSQSWPWTPMGESVCTQEIYAEVGA* |
| Ga0134034_11365482 | 3300012375 | Grasslands Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEEFWSQSWPWTPTGESVCPQESYAEVGA* |
| Ga0134029_10611252 | 3300012377 | Grasslands Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEESSSPSLSWTSIRESVWAQEMYAEVGA* |
| Ga0134038_11837871 | 3300012382 | Grasslands Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGALCAWCRHKLEEFWSQSWPWTPMGESVCPQESYAEVGA* |
| Ga0134046_12189601 | 3300012386 | Grasslands Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEESWSPSLSWTSIRESVWTQEMYAEVGA* |
| Ga0134031_10638222 | 3300012388 | Grasslands Soil | MRRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHTQEESWSQSLQWTPMEESVCAKEMYAEVGS* |
| Ga0134031_11460862 | 3300012388 | Grasslands Soil | MQRCSQCDIPLGVWPCPNPLCPELHGQSAGDLCAWCRHKLEESSSPSLSWTSIRESVWAQEMYAEVGA* |
| Ga0134035_10769141 | 3300012391 | Grasslands Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGELCAWCRHKLEESWSQACPWTPIGESVCTQEIYAEVGA* |
| Ga0134044_10234072 | 3300012395 | Grasslands Soil | MQRCRQCDIPLGGWPCPNPLCDELHGESAGALCAWCRHKQEESWSQALPWTALGESIGVQEMCAEVGS* |
| Ga0134057_13354011 | 3300012396 | Grasslands Soil | MQRCPQCDIPLGAWPCPNALCPELHGQSAGDLCAWCRHKQEESWSQALPWTALGESIGLQEMCAEVGS* |
| Ga0134056_13002151 | 3300012397 | Grasslands Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGDLCTWCRHKLEEFWSQSGPWTPMGESVCTQEIYAEVGA* |
| Ga0134048_10422641 | 3300012400 | Grasslands Soil | MQRCPQCDILLGAWPCPNPLCDELHGESAGALCAWCRHKLEESWSPSLSWTSIRESVWTQEMYAEVGA* |
| Ga0134055_11632682 | 3300012401 | Grasslands Soil | MQRCRQCDIPLGGWPCPNPLCDELHGESAGDLCAWCRHKLEEAWGQALPWTAMGEDVCVQEMY |
| Ga0134059_10786291 | 3300012402 | Grasslands Soil | MQRCPQCDIPLGAWPCPNPLCDELHGESAGALCAWCRHKQEESWSQALPWTALGESIGVQEMCAEVGL* |
| Ga0134059_12257302 | 3300012402 | Grasslands Soil | MQRCLQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEEFWSQSWPWTPTVESVCPQESYAEVGA* |
| Ga0134049_10557001 | 3300012403 | Grasslands Soil | MQRCPQCDIPLGTWPCPNPLCDELHGESAGALCAWCRHKQEESWSQALPWTALGESIGVQEMCAEVGS* |
| Ga0134041_11821062 | 3300012405 | Grasslands Soil | MQRCPQCDIPLGTWPCPNPLCDELHGESAGDLCAWCRHKQEESWSQSLPWTALGESVDVQEMCAEVGS* |
| Ga0134053_11496401 | 3300012406 | Grasslands Soil | QGDVMQRCPQCDILLGAWPCPNPLCDELHGESAGDLCAWCRHKQEESWGQSLPWTALGESVGVQEMCAEVGS* |
| Ga0134053_11760791 | 3300012406 | Grasslands Soil | MQRCPQCDIPLGAWPCPNALCPELHGQSAGDLCAWCRHKQEESWSQSLPWTSIGENVGAQELY |
| Ga0134053_13882741 | 3300012406 | Grasslands Soil | MQRCPQCDIPLGAWPCPNPLCDELHGESAGALCAWCRHKQEESWSQALPWTALGESIG |
| Ga0134045_11021251 | 3300012409 | Grasslands Soil | LGAWPCPNPLCDELHGESAGALCAWCRHKQEESWSQALPWTALGESIGVQEMCAEVGS* |
| Ga0134060_14329151 | 3300012410 | Grasslands Soil | MQRCRQCDIPLGGWPCPNPLCDELHGESAGDLCAWCRHKLEEAWGQALPWTAMGEDVCVQEMYSEVGS* |
| Ga0134060_14992531 | 3300012410 | Grasslands Soil | MQRCSRCDILLGAWPCPNPLCPELHGQSAGDLCAWCRHKLEEFWSQSLSWTLMEESVCAQEMYAEVGS* |
| Ga0150984_1146507171 | 3300012469 | Avena Fatua Rhizosphere | MQRCPQCDIPLGAWSCPNPLCDELHGESAGDLCAWCRHRLEESWSQSLPWTAMGEGVCVQEMYAEVGS* |
| Ga0150984_1179644042 | 3300012469 | Avena Fatua Rhizosphere | MRRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLQWTPMEESVCAKEMYAEVGS* |
| Ga0132258_111432112 | 3300015371 | Arabidopsis Rhizosphere | MPRCLQCEIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWGQLLPWIPMRERVYAQKVGLEVGV* |
| Ga0066667_102532082 | 3300018433 | Grasslands Soil | MQRCPQCDIPLGAWPCPNPLCDELHGESAGALCAWCRHKQEESWSQAFPWTALGESVDVQEMCAEVGS |
| Ga0066669_121643241 | 3300018482 | Grasslands Soil | MRRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHTQEESWSQSLQWTPMEESVCAKEMYAEVGS |
| Ga0207703_115345441 | 3300026035 | Switchgrass Rhizosphere | MQRCPQCDIPLGDWSCPNPLCEEMHGQSAGDLCMWCHHKQEESWSQSLPWTLLGESVCAQEMCAEVGS |
| Ga0207675_1002921922 | 3300026118 | Switchgrass Rhizosphere | MPRCPQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRRKEEESWSQVLPWTPMGESVCAQEIYAEVGV |
| Ga0209473_13141341 | 3300026330 | Soil | PLGTWPCPNPLCDELHGESAGDLCAWCRHKQEESWSQSLPWTALGESVGVQEMCAEVGS |
| Ga0209814_100804192 | 3300027873 | Populus Rhizosphere | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLQWTPMEESVCAQEMYAEVGS |
| Ga0209481_100159191 | 3300027880 | Populus Rhizosphere | MQRCARCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLQWTPMEESVC |
| Ga0209382_100567783 | 3300027909 | Populus Rhizosphere | MRRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLQWTPMEESVCAQEMYAEVGS |
| Ga0209382_123443621 | 3300027909 | Populus Rhizosphere | MQRCARCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWTLMEQSVCAEEMYAEVGA |
| Ga0268265_114721412 | 3300028380 | Switchgrass Rhizosphere | MQRCPQCDIPLGDWSCPNPLCEEMHGQSAGDLCMWCHHKQEESWSQSLPWTLLGESVCAQEMYAEVGV |
| Ga0247654_10268742 | 3300030552 | Soil | MQRCPQCDIPLGAWPCPNPLCPELHGQSAGGLCAWCRHKQEESWSQSLLWIPIGESVGAQEMYSVAS |
| Ga0247655_100864791 | 3300030621 | Soil | MQRCPQCDIPLGAWPCPNPLCPELHGQSAGGLCAWCRHKQEESWSQSLLWIPIGESVGAQEMYSEVGS |
| Ga0102752_14927072 | 3300030783 | Soil | MQRCSQCDIPLGAWPCPNPLCLELHGQSAGDLCAWCRHKQEESWSQSLAWTLMEQSISAEEMYAEVGS |
| Ga0306924_107393562 | 3300032076 | Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWTLMEESVCTQEMYAEVGS |
| Ga0306920_1025273631 | 3300032261 | Soil | MQRCSQCDIPLGAWPCPNPLCPELHGQSAGDLCAWCRHKQEESWSQSLSWTLMEESVCTQEMYAE |
| ⦗Top⦘ |
|
Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |