Metagenome / Metatranscriptome Family F097642

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097642
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	156 residues
Representative Sequence	GASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Number of Associated Samples	89
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.96 %
% of genes near scaffold ends (potentially truncated)	99.04 %
% of genes from short scaffolds (< 2000 bps)	90.38 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.269 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (48.077 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.43% β-sheet: 27.27% Coil/Unstructured: 51.30%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03734	YkuD	79.81
PF12697	Abhydrolase_6	1.92
PF16363	GDP_Man_Dehyd	0.96
PF13683	rve_3	0.96
PF00561	Abhydrolase_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	79.81
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	79.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.27 %
Unclassified	root	N/A	6.73 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	91.35 %
Unclassified	root	N/A	6.73 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.96 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	91.35 %
Unclassified	root	N/A	6.73 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18.27 %
Unclassified	root	N/A	6.73 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	12.50 %
Unclassified	root	N/A	6.73 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	4.81 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4.81 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.50 %
Unclassified	root	N/A	6.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	4.81 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	2.88 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.50 %
Unclassified	root	N/A	6.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	4.81 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	2.88 %
Cyclobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.50 %
Unclassified	root	N/A	6.73 %
Streptomyces aurantiacus group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group	3.85 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.88 %
Nitritalea	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Nitritalea	0.96 %
Streptomyces clavuligerus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	0.96 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.50 %
Unclassified	root	N/A	6.73 %
Streptomyces canus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces canus	3.85 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.88 %
Nitritalea halalkaliphila	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Nitritalea → Nitritalea halalkaliphila	0.96 %
Streptomyces clavuligerus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002077\|JGI24744J21845_10083263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces canus	585	Open in IMG/M
3300002239\|JGI24034J26672_10034472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300004114\|Ga0062593_102284904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300004156\|Ga0062589_101245833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300005093\|Ga0062594_100223037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1344	Open in IMG/M
3300005093\|Ga0062594_102300995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300005093\|Ga0062594_102595155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300005164\|Ga0066815_10106751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	531	Open in IMG/M
3300005327\|Ga0070658_10227251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1579	Open in IMG/M
3300005327\|Ga0070658_11049600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	709	Open in IMG/M
3300005329\|Ga0070683_101690654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300005330\|Ga0070690_101378397	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	567	Open in IMG/M
3300005338\|Ga0068868_100908819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	800	Open in IMG/M
3300005339\|Ga0070660_100127462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2034	Open in IMG/M
3300005339\|Ga0070660_100526476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	985	Open in IMG/M
3300005343\|Ga0070687_100522906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	803	Open in IMG/M
3300005347\|Ga0070668_101485018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	619	Open in IMG/M
3300005353\|Ga0070669_101188153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300005354\|Ga0070675_100299500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1416	Open in IMG/M
3300005355\|Ga0070671_101164320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces clavuligerus	678	Open in IMG/M
3300005440\|Ga0070705_100615833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	842	Open in IMG/M
3300005445\|Ga0070708_100644848	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300005458\|Ga0070681_10580665	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1035	Open in IMG/M
3300005458\|Ga0070681_11526832	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces canus	593	Open in IMG/M
3300005526\|Ga0073909_10456672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	611	Open in IMG/M
3300005535\|Ga0070684_101333950	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → Cyclobacteriaceae → Nitritalea → Nitritalea halalkaliphila	675	Open in IMG/M
3300005535\|Ga0070684_101584770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	617	Open in IMG/M
3300005563\|Ga0068855_102057433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	576	Open in IMG/M
3300005616\|Ga0068852_100332067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1479	Open in IMG/M
3300005718\|Ga0068866_10348749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	940	Open in IMG/M
3300005842\|Ga0068858_100555380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1112	Open in IMG/M
3300005842\|Ga0068858_101802750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces canus	605	Open in IMG/M
3300006196\|Ga0075422_10084203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1200	Open in IMG/M
3300006358\|Ga0068871_100522835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300006579\|Ga0074054_12142371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	915	Open in IMG/M
3300006605\|Ga0074057_12210922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	767	Open in IMG/M
3300006904\|Ga0075424_102096544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aurantiacus group → Streptomyces canus	596	Open in IMG/M
3300009094\|Ga0111539_11940458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	683	Open in IMG/M
3300009101\|Ga0105247_10138076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1595	Open in IMG/M
3300009156\|Ga0111538_13099509	Not Available	580	Open in IMG/M
3300009162\|Ga0075423_11547016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	712	Open in IMG/M
3300009174\|Ga0105241_12095849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M
3300010400\|Ga0134122_10757124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	921	Open in IMG/M
3300011119\|Ga0105246_11108110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300011119\|Ga0105246_12157167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300012895\|Ga0157309_10275151	Not Available	559	Open in IMG/M
3300012897\|Ga0157285_10269514	Not Available	567	Open in IMG/M
3300012898\|Ga0157293_10003765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2011	Open in IMG/M
3300012900\|Ga0157292_10127181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	789	Open in IMG/M
3300012943\|Ga0164241_10482559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	892	Open in IMG/M
3300012958\|Ga0164299_10055733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1872	Open in IMG/M
3300012960\|Ga0164301_10482776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300012985\|Ga0164308_10398680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1125	Open in IMG/M
3300013100\|Ga0157373_10570967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300014326\|Ga0157380_10218330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1704	Open in IMG/M
3300014745\|Ga0157377_10035771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2727	Open in IMG/M
3300014745\|Ga0157377_10113435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1632	Open in IMG/M
3300015374\|Ga0132255_101163975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300017792\|Ga0163161_10490030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	999	Open in IMG/M
3300020081\|Ga0206354_11049006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	618	Open in IMG/M
3300023097\|Ga0247757_10131908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	799	Open in IMG/M
3300025321\|Ga0207656_10114825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1248	Open in IMG/M
3300025899\|Ga0207642_10024873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2414	Open in IMG/M
3300025901\|Ga0207688_10208765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300025909\|Ga0207705_10550193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	897	Open in IMG/M
3300025909\|Ga0207705_10559874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300025912\|Ga0207707_10760592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	810	Open in IMG/M
3300025912\|Ga0207707_11184967	Not Available	619	Open in IMG/M
3300025917\|Ga0207660_10560337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	930	Open in IMG/M
3300025919\|Ga0207657_10930262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	669	Open in IMG/M
3300025921\|Ga0207652_11261532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	641	Open in IMG/M
3300025923\|Ga0207681_11148807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300025930\|Ga0207701_11375240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	576	Open in IMG/M
3300025936\|Ga0207670_10039195	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3101	Open in IMG/M
3300025937\|Ga0207669_11072724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	679	Open in IMG/M
3300025941\|Ga0207711_10064713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3159	Open in IMG/M
3300025944\|Ga0207661_10319204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1396	Open in IMG/M
3300025945\|Ga0207679_10701849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	918	Open in IMG/M
3300025949\|Ga0207667_10427833	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1347	Open in IMG/M
3300025949\|Ga0207667_10652111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1058	Open in IMG/M
3300025960\|Ga0207651_10906391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300025960\|Ga0207651_11248631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	667	Open in IMG/M
3300025961\|Ga0207712_11031148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	731	Open in IMG/M
3300025981\|Ga0207640_10046307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2798	Open in IMG/M
3300026023\|Ga0207677_10864835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	813	Open in IMG/M
3300026035\|Ga0207703_11054945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300026089\|Ga0207648_11495961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300026118\|Ga0207675_100068636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3313	Open in IMG/M
3300026121\|Ga0207683_10116001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2400	Open in IMG/M
3300026142\|Ga0207698_10014875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5190	Open in IMG/M
3300028380\|Ga0268265_12052316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	579	Open in IMG/M
3300028596\|Ga0247821_10124501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1473	Open in IMG/M
3300028597\|Ga0247820_10877368	Not Available	635	Open in IMG/M
3300028809\|Ga0247824_10258272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	969	Open in IMG/M
3300028812\|Ga0247825_10646315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	759	Open in IMG/M
3300030336\|Ga0247826_10391963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1024	Open in IMG/M
3300031547\|Ga0310887_10521372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	718	Open in IMG/M
3300031547\|Ga0310887_10552556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300031944\|Ga0310884_10861545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	557	Open in IMG/M
3300032013\|Ga0310906_10138558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1401	Open in IMG/M
3300032075\|Ga0310890_10619480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	839	Open in IMG/M
3300032075\|Ga0310890_11259518	Not Available	604	Open in IMG/M
3300032122\|Ga0310895_10066287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1377	Open in IMG/M
3300033551\|Ga0247830_11201151	Not Available	606	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.88%
Environmental	Environmental	47.12%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.88%
Terrestrial	Environmental → Terrestrial	47.12%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.12%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	20.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	14.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.42%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	20.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.50%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.50%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002077	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3	Host-Associated	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023097	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24744J21845_100832631	3300002077	Corn, Switchgrass And Miscanthus Rhizosphere	SLHPSQGTCRPYTCNLGRLAPGASATVIAVTEXTQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
JGI24034J26672_100344722	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	EEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0062593_1022849042	3300004114	Soil	QVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0062589_1012458331	3300004156	Soil	PGASATVIAVTETTQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0062594_1002230373	3300005093	Soil	TCRPYTCDLGRLGPGASATVVAVTQALEVGVVVNIVRVGSEEHESNYRNNVASALARVIGPLKPPVVVDRCRTLTAEPRALQHGRSSLVRLTARNRLGKPLRGHAVRARGAGIDATARTDRQGIARFALIPPKVGVVVFSSAGRTSSPRRSVCRTLLGVLGAEDTIVTG*
Ga0062594_1023009952	3300005093	Soil	VDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0062594_1025951551	3300005093	Soil	AALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG*
Ga0066815_101067511	3300005164	Soil	SQGTCRPYACDLGRLAPGASATVTAVTEATQVGVVVDIVRVGSEEIESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRLTARNRLGHPVGGLQVRARGATVAKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAEDTIVTG*
Ga0070658_102272511	3300005327	Corn Rhizosphere	VGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0070658_110496001	3300005327	Corn Rhizosphere	GSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPVSGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0070683_1016906542	3300005329	Corn Rhizosphere	QVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0070690_1013783971	3300005330	Switchgrass Rhizosphere	GSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0068868_1009088192	3300005338	Miscanthus Rhizosphere	TNRSSVAAADVNGLKLDDPQSFRTRLISLHPSQGTCRPYTCNLGRLAPGASATVIAVTETTQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0070660_1001274621	3300005339	Corn Rhizosphere	EVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0070660_1005264761	3300005339	Corn Rhizosphere	RGDVVAVVRLDLIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPVSGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0070687_1005229061	3300005343	Switchgrass Rhizosphere	QVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0070668_1014850182	3300005347	Switchgrass Rhizosphere	LARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0070669_1011881531	3300005353	Switchgrass Rhizosphere	VVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0070675_1002995003	3300005354	Miscanthus Rhizosphere	KLDDPQSFRTRLISLHPSQGTCRPYTCNLGRLAPGASATVIAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0070671_1011643201	3300005355	Switchgrass Rhizosphere	DPRSFRTKLISLEASQGSCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0070705_1006158331	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	AALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0070708_1006448481	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0070681_105806652	3300005458	Corn Rhizosphere	VRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0070681_115268321	3300005458	Corn Rhizosphere	DDPRSFRTRLISLKPSQGTCRPYTCDLGRLAPGASATVTAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG*
Ga0073909_104566722	3300005526	Surface Soil	TVTAVTEATQVGVVVDIVRVGSEEIESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRLTARNRLGHPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKATGPRKCQTRLGVLGAEDTIVTG*
Ga0070684_1013339501	3300005535	Corn Rhizosphere	MTVTNNSTVEASDVNGVKVDDARSFRTKLISLRTSQGTCRPYTCDLGRLGPGASATVVAVTQALEVGVVVNIVRVGSEEHESNYRNNVASALARVIGPLKPPVVVDRCRTLTAEPRALQHGRSSLVRLTARNRLGKPLRGHAVRARGAGIDATARTDRQGIARFALIPPKVGVVVFSSAGRTSSPRRSVCRTLLGVLGAEDTIVTG*
Ga0070684_1015847701	3300005535	Corn Rhizosphere	TNRSSVAAADVNGLKLDDPRSFRTRLISLKPSQGTCRPYTCDLGRLAPGASATVTAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0068855_1020574331	3300005563	Corn Rhizosphere	VRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0068852_1003320671	3300005616	Corn Rhizosphere	TNRSSVAAADVNGLKLDDPRSFRTKLISLEASQGSCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0068866_103487492	3300005718	Miscanthus Rhizosphere	GASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0068858_1005553802	3300005842	Switchgrass Rhizosphere	DVNGLKLDDPRSFRTKLISLEASQGSCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0068858_1018027501	3300005842	Switchgrass Rhizosphere	LKLDDPQSFRTRLISLHPSQGTCRPYTCNLGRLAPGASATVIAVTETTQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLRAHDTIVTG*
Ga0075422_100842031	3300006196	Populus Rhizosphere	FRTRLISLKPSQGTCRPYTCDLGRLAPGASATVTAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG*
Ga0068871_1005228351	3300006358	Miscanthus Rhizosphere	VVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0074054_121423712	3300006579	Soil	GLKLDDPRSFRTRLISLRASQGTCRPYACDLGRLAPGASATVTAVTEATQVGVVVDIVRVGSEEIESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRLTARSRLGHPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKATGPRKCQTRLGVLGAEDTIVTG*
Ga0074057_122109222	3300006605	Soil	LDDPRSFRTRLISLKPSQGTCRPYTCDLGRLAPGASATVTAVTEATQVGVVVDIVRVGSEEIESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRLTARNRLGHPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKATGPRKCQTRLGVLGAEDTIVTG*
Ga0075424_1020965441	3300006904	Populus Rhizosphere	TKLISLRTSQGTCRPYTCDLGRLGPGASATVVAVTQALEVGVVVNIVRVGSEEHESNYRNNVASALARVIGPLKPPVVVDRCRTLTAEPRALQHGRSSLVRLTARNRLGKPLRGHAVRARGAGIDATARTDRQGIARFALIPPKVGVVVFSSAGRTSSPRRSVCRTLLGVLGAEDTIVTG
Ga0111539_119404581	3300009094	Populus Rhizosphere	APGASATVTAVTEATWVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAAPRKCRTLLGVLGAEDTIVTG*
Ga0105247_101380761	3300009101	Switchgrass Rhizosphere	SCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0111538_130995091	3300009156	Populus Rhizosphere	VTNNSTVEASDVNGVKVDDARSFRTKLISLRTSQGTCRPYTCDLGRLGPGASATVVAVTQALEVGVVVNIVRVGSEEHESNYRNNVASALARVIGPLKPPVVVDRCRTLTAEPRALQHGRSSLVRLTARNRLGKPLRGHAVRARGAGIDATARTDRQGVARFKLIPPRVGLVVFSSDGRTPPLRRSACRTLL
Ga0075423_115470161	3300009162	Populus Rhizosphere	TKLISLEASQGSCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0105241_120958491	3300009174	Corn Rhizosphere	RNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0134122_107571241	3300010400	Terrestrial Soil	VAAALARVIGPLKPPTAQNICLTLVAEPRALENGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0105246_111081101	3300011119	Miscanthus Rhizosphere	VTAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG*
Ga0105246_121571672	3300011119	Miscanthus Rhizosphere	ALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0157309_102751511	3300012895	Soil	DDPQSFRTRLISLHPSQGTCRPYTCNLGRLAPGASATVIAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVLIGDRAKATGPRTCQTRLGVLGAHDTIVT
Ga0157285_102695141	3300012897	Soil	LAPGASATVIAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLSAQVTIVTG*
Ga0157293_100037653	3300012898	Soil	VIAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0157292_101271812	3300012900	Soil	LISLHPSQGTCRPYTCNLGRLAPGASATVIAVTETTQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0164241_104825591	3300012943	Soil	RPYTCNLGRLAPGASATVIAVTETTQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0164299_100557332	3300012958	Soil	GRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRLTARNRLGHPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKATGPRKCQTRLGVLGAEDTIVTG*
Ga0164301_104827762	3300012960	Soil	RSFRTRLISLRASQGTCRPYACDLGRLAPGASATVTAVTEATQVGVVVDIVRVGSEEIESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0164308_103986802	3300012985	Soil	LISLRASQGTCRPYACDLGRLAPGASATVTAVTEATQVGVVVDIVRVGSEEIESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0157373_105709671	3300013100	Corn Rhizosphere	AAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG*
Ga0157380_102183301	3300014326	Switchgrass Rhizosphere	AAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPIKGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0157377_100357714	3300014745	Miscanthus Rhizosphere	ASQGSCLPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCQTLLGVLGAEDTIVTG*
Ga0157377_101134353	3300014745	Miscanthus Rhizosphere	GVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG*
Ga0132255_1011639752	3300015374	Arabidopsis Rhizosphere	EATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPVSGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG*
Ga0163161_104900301	3300017792	Switchgrass Rhizosphere	TNRSSVAAADVNGLKLDDPRSFRTKLISLEASQGSCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCQTLLGVLGAEDTIVTG
Ga0206354_110490062	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	GVVVDIVRAGSDEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVGARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0247757_101319081	3300023097	Plant Litter	SLHPSQGTCRPYTCNLGRLAPGASATVIAVTETTQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207656_101148252	3300025321	Corn Rhizosphere	EATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207642_100248734	3300025899	Miscanthus Rhizosphere	QVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207688_102087652	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	GSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207705_105501932	3300025909	Corn Rhizosphere	VAAADVNGLKLDDPQSFRTRLISLHPSQGTCRPYTCNLGRLAGGASATVIAVTETTQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207705_105598741	3300025909	Corn Rhizosphere	CRPYTCNLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPVSGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207707_107605921	3300025912	Corn Rhizosphere	IVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207707_111849671	3300025912	Corn Rhizosphere	DVYGLKLDDPRSFRTRLISLKPSQGTCRPYTCDLGRLAPGASATVTAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG
Ga0207660_105603371	3300025917	Corn Rhizosphere	CATVTAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG
Ga0207657_109302621	3300025919	Corn Rhizosphere	GSEEVESNYRNNVAAALARVMGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPVSGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207652_112615322	3300025921	Corn Rhizosphere	RNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVALFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVT
Ga0207681_111488071	3300025923	Switchgrass Rhizosphere	SATVTAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207701_113752401	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	EATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPVSGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207670_100391954	3300025936	Switchgrass Rhizosphere	DDPRSFRTKLISLEASQGSCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207669_110727241	3300025937	Miscanthus Rhizosphere	VESNYRNNVAAALVRVIGPLKPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207711_100647131	3300025941	Switchgrass Rhizosphere	VNGLKLDDPRSFRTKLISLEASQGSCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207661_103192042	3300025944	Corn Rhizosphere	EATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207679_107018491	3300025945	Corn Rhizosphere	GSEEVESNYRNNVAAALARVIGPLRPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207667_104278332	3300025949	Corn Rhizosphere	NGLTLDDPQSFRTRLISLHPSQGTCRPYTCNLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207667_106521111	3300025949	Corn Rhizosphere	NYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207651_109063911	3300025960	Switchgrass Rhizosphere	ARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPVSGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207651_112486311	3300025960	Switchgrass Rhizosphere	GPLRPPRAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207712_110311482	3300025961	Switchgrass Rhizosphere	TAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207640_100463074	3300025981	Corn Rhizosphere	TCNLGRLAPGASATVIAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207677_108648352	3300026023	Miscanthus Rhizosphere	PQSFRTRLISLHPSQGTCRPYTCNLGRLAPGASATVIAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207703_110549452	3300026035	Switchgrass Rhizosphere	GSCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPVSGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207648_114959611	3300026089	Miscanthus Rhizosphere	EATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207675_1000686361	3300026118	Switchgrass Rhizosphere	LGRLAPGASATVTAVTEKTRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0207683_101160014	3300026121	Miscanthus Rhizosphere	SLEASQGSCRPYTCDLGRLAPGASATVIAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0207698_100148751	3300026142	Corn Rhizosphere	LDDPQSFRTRLISLHPSQGTCRPYTCNLGRLAPGASATVIAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0268265_120523162	3300028380	Switchgrass Rhizosphere	SATVIAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLTLVAEPRALEKGRSSVVRLTARNRLGRPINGLRVRARGASVDERARTDRQGVARFSVTPARLGLLVFIGDRAKATGPRTCQTRLGVLGAHDTIVTG
Ga0247821_101245012	3300028596	Soil	AAALARVIGPVKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG
Ga0247820_108773681	3300028597	Soil	VTNRSSVAAADVNGLKLDDPRSFRTRLISLRPSQGTCRPYTCDLGRLAPGASATVTAVTEATQVGVVVDIVRVGSEEVESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG
Ga0247824_102582722	3300028809	Soil	CAVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0247825_106463152	3300028812	Soil	VAEAPGASRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPVSGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0247826_103919632	3300030336	Soil	IGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG
Ga0310887_105213722	3300031547	Soil	EEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0310887_105525561	3300031547	Soil	EEVESNYRNNVAAALARVIGPLKPPTAQNICLALTAEPRALEKGRSSVVRVTARNRLGRPVGGLQVRARGATVDKQARTDRQGVVRFSVTPARLGLLVFTGDRAKAAGPRKCQTRLGVLGAKDTIVTG
Ga0310884_108615451	3300031944	Soil	EVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0310906_101385582	3300032013	Soil	AIAAADVNGLKVDDPRSYRTRLISLRASQGTCRPYTCDLGRLAPGASATVVAITETTQVGIVVDIVRVGSEEIESNYRNNVAAALARVIGPLTPPAGLKLCRTLTAEPRSLQGGRTAIVRVTARNPLGKPLARVPVRARGAGVRERTTTGADGVARFAMTPRQLGIVYFEESGRTVASRGSQCRTLLGVQKTLGGSVTG
Ga0310890_106194801	3300032075	Soil	DLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVIGAEDTIVTG
Ga0310890_112595181	3300032075	Soil	AADVNGLKVDDPRSYRTRLISLRASQGTCRPYTCDLGRLAPGASATVVAITETTQVGIVVDIVRVGSEEIESNYRNNVAAALARVIGPLTPPAGLKLCRTLTAEPRSLQGGRTAIVRVTARNPLGKPLARVPVRARGAGVRERTTTGADGVARFAMTPRQLGIVYFEESGRTVASRGSQCRTLLGVQKTLGGSVTG
Ga0310895_100662871	3300032122	Soil	KLISLEASQGSCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPISGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVTG
Ga0247830_112011511	3300033551	Soil	FRTKLISLEASQGSCRPYTCDLGRLAPGASATVTAVTEATRVGVVVDIVRAGSEEVESNYRNNVAAALARVIGPLKPPTAQNVCLALTAEPRALEKGRSSVVRVTARNRFGRPVSGLRVRARGASVDKRARTDRQGVARFSVTPARLGLLVFTGDRAKAAGPRKCRTLLGVLGAEDTIVT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097642

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences