NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F097640

Metagenome Family F097640

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F097640
Family Type Metagenome
Number of Sequences 104
Average Sequence Length 78 residues
Representative Sequence MIRRLLVVGVCCVALSAVIAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPAPAKVETFTVETFA
Number of Associated Samples 88
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 92.08 %
% of genes near scaffold ends (potentially truncated) 96.15 %
% of genes from short scaffolds (< 2000 bps) 93.27 %
Associated GOLD sequencing projects 80
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (83.654 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(10.577 % of family members)
Environment Ontology (ENVO) Unclassified
(48.077 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(69.231 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 25.24%    β-sheet: 0.00%    Coil/Unstructured: 74.76%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00903Glyoxalase 5.77
PF07883Cupin_2 4.81
PF12681Glyoxalase_2 4.81
PF05853BKACE 4.81
PF07995GSDH 3.85
PF08450SGL 3.85
PF12543DUF3738 2.88
PF01272GreA_GreB 1.92
PF00753Lactamase_B 1.92
PF07228SpoIIE 1.92
PF03551PadR 1.92
PF13442Cytochrome_CBB3 1.92
PF01152Bac_globin 1.92
PF12697Abhydrolase_6 1.92
PF00311PEPcase 0.96
PF03713DUF305 0.96
PF03783CsgG 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG3246Uncharacterized conserved protein, DUF849 familyFunction unknown [S] 4.81
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 3.85
COG3386Sugar lactone lactonase YvrECarbohydrate transport and metabolism [G] 3.85
COG3391DNA-binding beta-propeller fold protein YncEGeneral function prediction only [R] 3.85
COG0782Transcription elongation factor, GreA/GreB familyTranscription [K] 1.92
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 1.92
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 1.92
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.92
COG2346Truncated hemoglobin YjbIInorganic ion transport and metabolism [P] 1.92
COG1462Curli biogenesis system outer membrane secretion channel CsgGCell wall/membrane/envelope biogenesis [M] 0.96
COG2352Phosphoenolpyruvate carboxylaseEnergy production and conversion [C] 0.96
COG3544Uncharacterized conserved protein, DUF305 familyFunction unknown [S] 0.96

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms83.65 %
UnclassifiedrootN/A16.35 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004157|Ga0062590_101003156All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium794Open in IMG/M
3300004479|Ga0062595_102574686All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300005093|Ga0062594_101055473All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300005218|Ga0068996_10036948All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300005331|Ga0070670_101225851All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300005335|Ga0070666_10281023All Organisms → cellular organisms → Bacteria1183Open in IMG/M
3300005339|Ga0070660_101055094All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300005353|Ga0070669_100375357All Organisms → cellular organisms → Bacteria1159Open in IMG/M
3300005353|Ga0070669_101193895All Organisms → cellular organisms → Bacteria657Open in IMG/M
3300005356|Ga0070674_102160744Not Available508Open in IMG/M
3300005365|Ga0070688_101149992All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300005441|Ga0070700_101746367All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300005457|Ga0070662_101097651All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300005466|Ga0070685_10871842All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300005468|Ga0070707_100893088All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300005543|Ga0070672_100584241All Organisms → cellular organisms → Bacteria → Proteobacteria972Open in IMG/M
3300005543|Ga0070672_101136145All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300005543|Ga0070672_101345856All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300005544|Ga0070686_100206589All Organisms → cellular organisms → Bacteria1411Open in IMG/M
3300005546|Ga0070696_100897115All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium735Open in IMG/M
3300005564|Ga0070664_101642098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium609Open in IMG/M
3300005615|Ga0070702_101400447All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300005617|Ga0068859_100838597All Organisms → cellular organisms → Bacteria → Acidobacteria1006Open in IMG/M
3300005617|Ga0068859_100901706All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300005618|Ga0068864_101779583All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300005719|Ga0068861_100702983All Organisms → cellular organisms → Bacteria → Proteobacteria939Open in IMG/M
3300005719|Ga0068861_101662483All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005841|Ga0068863_101294441All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300005843|Ga0068860_100063058All Organisms → cellular organisms → Bacteria3521Open in IMG/M
3300005843|Ga0068860_100787622All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300005843|Ga0068860_102259529Not Available565Open in IMG/M
3300006196|Ga0075422_10095049Not Available1137Open in IMG/M
3300006358|Ga0068871_100815597All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300006852|Ga0075433_10454695All Organisms → cellular organisms → Bacteria1129Open in IMG/M
3300006854|Ga0075425_100030010All Organisms → cellular organisms → Bacteria6027Open in IMG/M
3300006969|Ga0075419_11129340All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300009094|Ga0111539_11665399All Organisms → cellular organisms → Bacteria740Open in IMG/M
3300009094|Ga0111539_13137370Not Available533Open in IMG/M
3300009098|Ga0105245_10425987All Organisms → cellular organisms → Bacteria1331Open in IMG/M
3300009148|Ga0105243_12965219All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300009162|Ga0075423_10029679All Organisms → cellular organisms → Bacteria5518Open in IMG/M
3300009176|Ga0105242_11541408All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium696Open in IMG/M
3300009177|Ga0105248_11674279All Organisms → cellular organisms → Bacteria → Acidobacteria721Open in IMG/M
3300009177|Ga0105248_11950702Not Available667Open in IMG/M
3300009792|Ga0126374_10506751Not Available871Open in IMG/M
3300010047|Ga0126382_12013853All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300010359|Ga0126376_12731516All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300010400|Ga0134122_12918554All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300010403|Ga0134123_10339155Not Available1352Open in IMG/M
3300011119|Ga0105246_10727109All Organisms → cellular organisms → Bacteria → Acidobacteria873Open in IMG/M
3300011439|Ga0137432_1128558All Organisms → cellular organisms → Bacteria807Open in IMG/M
3300012189|Ga0137388_10588946All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1034Open in IMG/M
3300012208|Ga0137376_11214852Not Available643Open in IMG/M
3300012469|Ga0150984_100388760All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1514Open in IMG/M
3300012896|Ga0157303_10323568All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300012902|Ga0157291_10025610All Organisms → cellular organisms → Bacteria → Proteobacteria1223Open in IMG/M
3300012971|Ga0126369_12653492Not Available585Open in IMG/M
3300012986|Ga0164304_11102866All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium635Open in IMG/M
3300012986|Ga0164304_11560356All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300013296|Ga0157374_11133122All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300014326|Ga0157380_10683792All Organisms → cellular organisms → Bacteria → Acidobacteria1028Open in IMG/M
3300014326|Ga0157380_11949737All Organisms → cellular organisms → Bacteria648Open in IMG/M
3300014968|Ga0157379_10551753All Organisms → cellular organisms → Bacteria → Proteobacteria1072Open in IMG/M
3300014968|Ga0157379_12145627Not Available554Open in IMG/M
3300015077|Ga0173483_10150849All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1025Open in IMG/M
3300015200|Ga0173480_10274668All Organisms → cellular organisms → Bacteria929Open in IMG/M
3300015371|Ga0132258_12264940All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1363Open in IMG/M
3300015371|Ga0132258_12461121All Organisms → cellular organisms → Bacteria1303Open in IMG/M
3300015373|Ga0132257_104070773All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300017965|Ga0190266_10059893All Organisms → cellular organisms → Bacteria → Proteobacteria1393Open in IMG/M
3300019356|Ga0173481_10284873All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300019362|Ga0173479_10041985All Organisms → cellular organisms → Bacteria → Proteobacteria1454Open in IMG/M
3300021445|Ga0182009_10844463All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium503Open in IMG/M
3300025893|Ga0207682_10179721All Organisms → cellular organisms → Bacteria → Proteobacteria966Open in IMG/M
3300025908|Ga0207643_10059254All Organisms → cellular organisms → Bacteria2184Open in IMG/M
3300025923|Ga0207681_10401359Not Available1107Open in IMG/M
3300025925|Ga0207650_11422749All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium590Open in IMG/M
3300025926|Ga0207659_11229557All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300025926|Ga0207659_11559049All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300025935|Ga0207709_11658492All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium531Open in IMG/M
3300025937|Ga0207669_10861332All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium755Open in IMG/M
3300025939|Ga0207665_11345704All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300025942|Ga0207689_10763792All Organisms → cellular organisms → Bacteria → Acidobacteria816Open in IMG/M
3300025942|Ga0207689_11605850All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
3300025944|Ga0207661_11027698Not Available759Open in IMG/M
3300026067|Ga0207678_10750565All Organisms → cellular organisms → Bacteria → Acidobacteria860Open in IMG/M
3300026075|Ga0207708_11430469All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium607Open in IMG/M
3300026095|Ga0207676_11706861All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium628Open in IMG/M
3300027717|Ga0209998_10017473Not Available1516Open in IMG/M
3300028381|Ga0268264_10762293All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300031366|Ga0307506_10330747All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium605Open in IMG/M
3300031547|Ga0310887_10151710Not Available1215Open in IMG/M
3300031562|Ga0310886_10265306All Organisms → cellular organisms → Bacteria967Open in IMG/M
3300031854|Ga0310904_11163429All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300031858|Ga0310892_10679516All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300032074|Ga0308173_10529509All Organisms → cellular organisms → Bacteria → Acidobacteria1059Open in IMG/M
3300032157|Ga0315912_11224938All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300032211|Ga0310896_10097118All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300032211|Ga0310896_10645105All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium595Open in IMG/M
3300032954|Ga0335083_10426659All Organisms → cellular organisms → Bacteria → Acidobacteria1126Open in IMG/M
3300033551|Ga0247830_10502304All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria954Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil10.58%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere10.58%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.62%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere7.69%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.77%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.88%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.88%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.88%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.88%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil1.92%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.92%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.92%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.96%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.96%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.96%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.96%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.96%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.96%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005218Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012902Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1EnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027717Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032157Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soilEnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062590_10100315623300004157SoilMAKRLSFVFAGGVLVVLLASVLAAQTKTVPRPPAQPAGQQPPGESATPDGYAPLPQWLGQTRAPAPAK
Ga0062595_10257468613300004479SoilMLRGLVIAGAACVALGAVVTNAQNRSVPRPPAQPAGQQPPGESAAPDGYQPIPQWMGQTHAPVPAKTETFTVETFAEGLNGASLAFLPDGR
Ga0062594_10105547323300005093SoilMIRRAKWAVALCVALGAVITAQTKTVPRPPAQAQGQQPPGESAAPDGYQPLPAWMGQTRAPAPAKTETFTVDTVTEGLNGAWFK
Ga0068996_1003694813300005218Natural And Restored WetlandsMTCRSLVAGVVCVALGAVLAAQTKTVPRPPAQAAGQQPPGESAAPDGYQPLPQWLGQTRAAVPSKTETFSVET
Ga0070670_10122585123300005331Switchgrass RhizosphereMIRRLLVVGVCCVALSAVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAAMPAKVETFTVETF
Ga0070666_1028102323300005335Switchgrass RhizosphereMIRRLLVVGVCCVALSAVIAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPAPAKVETFTVETFAQGVNGAAFQFLPDG
Ga0070660_10105509423300005339Corn RhizosphereMIRRLIILSVATYALTGVATGQTKTVPRPPAQAPGQQPAGESAAPDGYQPLPQWLGQTRAPAPARTETFTVSTFADGLNGASFRFLPDGRIL
Ga0070669_10037535713300005353Switchgrass RhizosphereMIRRLLAAGAACLTVAAVVTFAQTRVVPRPPLQAGAQPQGESAAPDGYAPVPQWLGQTRAAVPAKSETFTVETVVSGVNA
Ga0070669_10119389513300005353Switchgrass RhizosphereMIRRVLAVGVLCVAAGSVMAAQTTTVPRPPAQPAGQQPQGESAAPDGYQPLPAWMGQTRAPAPAKT
Ga0070674_10216074423300005356Miscanthus RhizosphereMIRRALGAGVLCVALGAVVAAQTKAVPRPAAQPPGQQPPGESAAPDGYQPVPAWLGQTRAPKPAKTET
Ga0070688_10114999223300005365Switchgrass RhizosphereMIRRVLAAGVLGVALTAVIAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPAWLGQTRAPAPAKSETFTV
Ga0070700_10174636713300005441Corn, Switchgrass And Miscanthus RhizosphereMFRCVLVVGAVCLVAGVVLGGQAKTVPRPPAQAPGQAPAGESAAPDGYQPLPQWLGQTRAPAPAKTEAFTVQ
Ga0070662_10109765123300005457Corn RhizosphereMIRRLLVVGVCCVALSAVIAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPMPAKVETFTVE
Ga0070685_1087184223300005466Switchgrass RhizosphereMIRRAKWAVALCVALGAVITAQTKTVPRPPAQAQGQQPPGESAAPDGYQPLPAWMGQTRAPAPAKTETFTVDTVTEGLNG
Ga0070707_10089308813300005468Corn, Switchgrass And Miscanthus RhizosphereMIRRSLLCVAVSIALSALLAAQNKKVPRPPALPQGQQPPGESATPDGYQPLPQWLGQTRAPMPAKTEAF
Ga0070672_10058424113300005543Miscanthus RhizosphereMIRRLLVLSGAVCALSAIVGAQTKTVPRPPAQAPGPQPAGESAAPDGYQPLPQWLGQTRAPAPAKSEAFTVQTFAEGLNGA
Ga0070672_10113614523300005543Miscanthus RhizosphereMIRRLLVAGAACVAVGAVVMSAQTKAVPRPPAQAPGQPPAGESAAPDGYQPIPQWLGQTHAPVPAKTETFTVETFAEGLTGAFSFHFL
Ga0070672_10134585613300005543Miscanthus RhizosphereMIRRPFVAAALSVALGVAVVAQTRPVPRPAALPAGQQPPGESAAPDGYAPLPQWLGQTRAPAPAKTEAFTVQTFAEGVNGAAFQF
Ga0070686_10020658913300005544Switchgrass RhizosphereMIRRLLVVGVCCVALSAVIAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPAPAKIETFTVETFA
Ga0070696_10089711513300005546Corn, Switchgrass And Miscanthus RhizosphereMIRRSLVVGVCGVALGAVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPMPAKIEAFTVETFAQGVNGAAFQ
Ga0070664_10164209823300005564Corn RhizosphereMSWFTHFPGGIMISRSLVAAVCCVALGAVAAAQTKAVPRPPAQPAGQQPPGESAAPDGYQPVPQWLGQTRAAVPAK
Ga0070702_10140044723300005615Corn, Switchgrass And Miscanthus RhizosphereMIRRSIVVSVCCVTLSAVIAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPVPQWLGQTRAAVPAKVETFAVETFAQGVNGAAFQFLPDGRILLAEKN
Ga0068859_10083859723300005617Switchgrass RhizosphereMLRGWLVAGAACIALGAVGMNAQTRSVPRPPAQPAGQQPPGESATPDGYQPIPQWMGQTHAPVPAKTETFTVETFAEGLNGASLS
Ga0068859_10090170613300005617Switchgrass RhizosphereMIRRLLVVGVCCVALSAVIAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPAPAKVETFTVETFA
Ga0068864_10177958323300005618Switchgrass RhizosphereMIRRPFVAAALSVALGVAVVAQTRPVPRPAALPAGQQPPGESAAPDGYAPLPQWLGQTRAPAP
Ga0068861_10070298313300005719Switchgrass RhizosphereMIRRVLGTGALCVTLGSVIAAQTGTVPRPPAQPPGQQPAGESAAPDGYQPLPAWLGQTRAPAPAKTETFTVETVAEGLNGAWFR
Ga0068861_10166248313300005719Switchgrass RhizosphereMFRCVLVVGAVCLVAGVVLGGQAKTVPRPPAQAPGQAPVGESAAPDGYQPLPQWLGQTRAPAPAKTEAFTVQTFAEG
Ga0068863_10129444123300005841Switchgrass RhizosphereMIRRVLVTGALCVGLGAVMAAQTGTVPRPPAQPAGQQPAGESAAPDGYQPLPAWLGQTRAPAPAKTETFTVETFAE
Ga0068860_10006305813300005843Switchgrass RhizosphereMIRRAKWAVALCVALGAVITAQTKTVPRPPAQAQGQQPPGESAAPDGYQPLPAWMGQTRAPAPAKTETF
Ga0068860_10078762213300005843Switchgrass RhizosphereMMRRVLVAGVPGIVAVMALSAGMAAAQTTVPRPPAQAPGQPQGESAAPDGYQPLPAWMGQTRAPAPAKSETFTVETFADGLNGAGSFH
Ga0068860_10225952923300005843Switchgrass RhizosphereMIARILGVGMVCVAVSSALAAQTKTVPRPAALPPGQQPPGESTAPDGYQPLPQWLGQTHAPAPA
Ga0075422_1009504913300006196Populus RhizosphereMIARILGVGMVCVALSSALAAQTKTVPRPAALPPGQQPPGESTAPDGYQPLPQWLGQTHAPAPAKPEAF
Ga0068871_10081559713300006358Miscanthus RhizosphereMIRRAKWAVALCVALGAVITAQTKTVPRPPAQAQGQQPPGESAAPDGYQPLPAWMGQTRAPAPAKTETFTVDTVTEGLNGAWFKF
Ga0075433_1045469533300006852Populus RhizosphereMIARILGVGMVCVALSSALAAQTKTVPRPAALPPGQQPPGESTAPDGYQPLPQWLGQTHAPAPAKPEAFVVETFATGTNGAGFQFLPDGRILLA
Ga0075425_10003001013300006854Populus RhizosphereMIRHSLVIGVCGVALSAVVAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPVPQWLGQTRASVPAKTETFTVETFAQGVNGATIQFLP
Ga0075419_1112934013300006969Populus RhizosphereMIRRSLVVGVCGVALGAVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPMPAKVETFAVETFAQGVNGAA
Ga0111539_1166539913300009094Populus RhizosphereMSIGGCCYTFLGGIMIRRSLVVGVCCVALGAVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPMPAKVETFAVETF
Ga0111539_1313737023300009094Populus RhizosphereMIRRVLTAGMLCVALGSVMAAQTRTVPRPPAQAPGQQPQGESAAPDGYQPLPAWLGQTRAPAPARTETFTVETF
Ga0105245_1042598723300009098Miscanthus RhizosphereMILRTVIAGATCVALGFVVITAQTRVVPRPPAQAPGQQPPGESAAPDGYAPVPQWLGQTRASVPAKTEAYTVD
Ga0105243_1296521923300009148Miscanthus RhizosphereMTRYSMLAAAFCVALAADITAQTKTVPRPPAQPAGQQPPGESAAPDGYAPLPQWLGQTRAPAPAKTEAFSVQTFAEGLNG
Ga0111538_1292679023300009156Populus RhizosphereVSGVVLAGQAKTVPRPPAQAPGQAPAGESAAPDGYQPLPQWLGQTRAPAAAKTEAFTVQTFAEGMNGAAFQFLPD
Ga0075423_1002967913300009162Populus RhizosphereMIARVLGIGMVCVALSSALAAQTKTVPRPAALPPGQQPPGESTAPDGYQPLPQWLGQTRAPAPAKTETFTV
Ga0105242_1154140823300009176Miscanthus RhizosphereMIRRTVIAGATCVALGSVVIIAQTRVVPRPPAQAPGQQPPGESAAPDGYAPVPLWLGQTRASAPAKTEAYTVETVAAGLTGANFRFLPDGRIIVAE
Ga0105248_1167427913300009177Switchgrass RhizosphereMIRRTVIAGATCVALGSVVIIAQTRVVPRPPAQAPGQQPPGESAAPDGYAPVPLWLGQTRASAPAK
Ga0105248_1195070223300009177Switchgrass RhizosphereMIARILGVGMVCVAVSSALAAQTKTVPRPAALPPGQQPPGESTAPDGYQPLPQWLGQTHAPAPAKTEAFVVETFATGTNGAGFQFLPDGRILLAE
Ga0126374_1050675123300009792Tropical Forest SoilMIRRSLVVVACAALGAIVITAQTKSVPRPAALPPGQQPQGESAAPDGYAPIPQWLGQTRAQETAKSEMFTVE
Ga0126382_1201385323300010047Tropical Forest SoilMRRALGLAVVLCCLFRAVAVEAQSIRAVPRPPAQTPGAQTSESAAPDGYAPIPAWLGQTRAPRPAKTVPYDV
Ga0126376_1273151613300010359Tropical Forest SoilMIRRSIFIGAAGLMLGAVVITAQTKSVPRPAALPPGQQPPGESATPDGYAPIPQWLGQTHAAVPAKSETFTVETFAEGLNG
Ga0134122_1291855423300010400Terrestrial SoilMFRCVLAVGAVCLVTGAVLAGQTKTVPRPPALAPGQAPPGESAAPDGYQPLPQWLGQTRAPAPAKTEAFTVQTFA
Ga0134123_1033915533300010403Terrestrial SoilMIARVLGIGMVCVALSSALAAQTKTVPRPAALPPGQQPPGESTAPDGYQPQPQWLGQTRAPAPLKTEAFTVET
Ga0105246_1072710913300011119Miscanthus RhizosphereMIRRSLVTAVCCVALGAVAAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPVPQWLGQTRAAVPAKVETFAVETF
Ga0137432_112855813300011439SoilMIRRSIVVGVCCVALGAVLAAQTKSVPRPPAQPAGQQPPGESASPDGYQPLPQWLGQTRAPMPAKVETFAVETFAQG
Ga0137388_1058894633300012189Vadose Zone SoilMVRGLFVAGAACIALGAVVTNAQDRSVPRPPAQPAGQQPPGESAAPDGYQPIPQWMGQTHAPVPAKTETFTVETFAEGLNGASLAFFPDGRIIVAE
Ga0137376_1121485223300012208Vadose Zone SoilMIRRSLLLGAACVALGAVVITAQSKSIPRPAALPPGQQPPGESATPDGYAPIPQWLGQTRAPVPAKSETFAVETFAD
Ga0150984_10038876013300012469Avena Fatua RhizosphereMIRRLVVLSGTLCALGAIAGAQTKNVPRPPAPAAGQQPAGESAAPDGYRPLPQWLGQTRAPAPAKTEPFTVQTFAEGLNGASFRFLP
Ga0157303_1032356813300012896SoilMIRRLLVVGVCCVALSAVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYAPLPQWLGQTRAPAPAKTEAFTVQTFSEG
Ga0157291_1002561023300012902SoilMIRRAFGAGVVCVALGAVIAAQTKAVPRPAALPPGQQPPGESAAPDGYQPLPAWLGQTRAPAP
Ga0126369_1265349213300012971Tropical Forest SoilMIRRSLAVGAACVALGAVIITAQTKSVPRPAALPPGQQPAGESAAPDGYAPIPQWLGQTRAPVPAKAASFDV
Ga0164304_1110286623300012986SoilMILRTVIAGATCVALGFVVITAQTRVVPRPPAQAPGQQPPGESAAPDGYAPVPQWLGQTRASVPAKTEAYTVETVATGLSGLNFRFL
Ga0164304_1156035613300012986SoilMIRRLLIPSLAMCVLTVVVTAQTKTVPRPPAQPAGQQPAGESAAPDGYQPLPQWLGQTRAPAPARTEAFTVQTFADGLN
Ga0157374_1113312213300013296Miscanthus RhizosphereMIRRLLVAGAACVAVGAVVMSAQTKAVPRPPAQAPGQPPAGESAAPDGYQPIPQWLGQTHAPVPARIETFTVETFAEGLTGA
Ga0157380_1068379213300014326Switchgrass RhizosphereMIRCLLVVGVCCVALSAVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAAVPAKVETFA
Ga0157380_1194973713300014326Switchgrass RhizosphereMIRRVVSAAVLCVAALGSVIAAQTGTVPRPPAQPPGQQPAGESAAPDGYQPLPAWLGQTRAPAPAKTE
Ga0157379_1055175313300014968Switchgrass RhizosphereMMRRVLVAGVPGIVAVMALSAGMAAAQTTVPRPPAQAPGQPQGESAAPDGYQPLPAWMGQTRAP
Ga0157379_1214562723300014968Switchgrass RhizosphereMLRGLVIAGAACVALGAVVTNAQNRSVPRPPAQPAGQQPPGESATPDGYQPIPLWMGQTHAPVPAKTETFIVETFAEGLNGAS
Ga0173483_1015084913300015077SoilMIRRLLVVGVCCVALSAVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPVPQWLGQTRAAVPAKVETFAVETFAQGVNGAAFQFLPDGRILLAE
Ga0173480_1027466813300015200SoilMIRRLLVVGVCCVALSAVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPMPAKVETFA
Ga0132258_1226494013300015371Arabidopsis RhizosphereMIRRVLIVGAACVALGSVFVAAQTKTVPRPPAQAPGQQPPGESAAPDGYAPIPQWLGQTRAAVPLKSETFSVATFASPVNGAWFDFLPDGRIILGERDGHIEII
Ga0132258_1246112123300015371Arabidopsis RhizosphereMIQITINFRPNTKLPGGIMIRRSLVGALCLALSIVLVAQTKSVPRPPALPQGQQPPGESATPDGYQPLPQWLGQTRAPMPAKTEAFTVQTVA
Ga0132257_10407077313300015373Arabidopsis RhizosphereMIRRSLLVVVCVALGAVVAAQTKTVPRPPAQAPGQQPPGESAAPDGYQPVPQWLGQTRASVPAKSETFTVETFTQGVNGAT
Ga0190266_1005989313300017965SoilMIRRALGAGVVCVALGAVIAAQTKAVPRPAALPPGQQPPGESAAPDGYQPLPAWLGQTRAPAPTKTETFT
Ga0173481_1028487323300019356SoilMIRRLLVVGVCCVALSAVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPMPAKVETFAVETFAQGVNGAA
Ga0173479_1004198513300019362SoilMIRRAFGAGVVCVALGAVIAAQTKAVPRPAALPPGQQPPGESAAPDGYQPLPAWLGQTRAPAPAKTETFT
Ga0182009_1084446323300021445SoilMKRLAPLAGVIFVSLTVALAGQTRSVPRPAALPAGQQPPGESASPDGYAPLPQWLGQTRAPAPAKTEP
Ga0207682_1017972123300025893Miscanthus RhizosphereMIRRAKWAVALCVALGAVITAQTKTVPRPPAQAQGQQPPGESAAPDGYQPLPAWMGQTRAPAPAKTETFTVDTV
Ga0207643_1005925413300025908Miscanthus RhizosphereMIRRAKWAVALCVAPLMGLSAVVAAQTRTVPRPPAQPAGQQPPGESAAPDGYQPLPAWLGQTRAPVPAKSETFTADTFTEGLNG
Ga0207681_1040135933300025923Switchgrass RhizosphereMIRRLLAAGAACLTVAAVVTFAQTRVVPRPPLQAGAQPQGESAAPDGYAPVPQWLGQTRAAVPAKSETFTVETVVSGVNAL
Ga0207650_1142274923300025925Switchgrass RhizosphereMIRRVLGAGASCVALCMVLSAVVAAQTKAVPRPPAQAGQPAGESAAPDGYQPLPAWLGQTRAPSPTKTETFTVETFA
Ga0207659_1122955723300025926Miscanthus RhizosphereMIRSSVVLGTVGVAVCTAVAIAQTREVPRPPLQAGAQPQNESAAPDGYAPVPQWLGQTRAAVPAKTETFTVDTVVSGINALNFRF
Ga0207659_1155904913300025926Miscanthus RhizosphereMFRCVLVVGAVCLVAGAVVNGQVKTVPRPPAQAPGQAPPGESAAPDGYQPLPQWLGQTRAPAPAK
Ga0207709_1165849223300025935Miscanthus RhizosphereMTRYSMLAAAFCVALAADITAQTKTVPRPPAQPAGQQPPGESAAPDGYAPLPQWLGQTRAPAPAKTEAFSVQ
Ga0207669_1086133213300025937Miscanthus RhizosphereMIRRALGAGVLCVALGAVVAAQTKAVPRPAAQPPGQQPPGESAAPDGYQPVPAWLGQTRAPKPAKTETFTVETFAEGLNGAW
Ga0207665_1134570423300025939Corn, Switchgrass And Miscanthus RhizosphereMIRKALVTGASLFALGSVLLIAQTKAVPRPPAQSGPPQGESATPDGYAPIPQWLGQTRAPVPAKT
Ga0207689_1076379213300025942Miscanthus RhizosphereMLRGLVIAGAACVALGAVVTNAQNRSVPRPPAQPAGQQPPGESATPDGYQPIPLWMGQTHAPVPAKTETFIVETF
Ga0207689_1160585023300025942Miscanthus RhizosphereMIRRSIVVSVCCVTLSAVIAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPVPQWLGQTRAAVPAKVETFAVETFAQGV
Ga0207661_1102769813300025944Corn RhizosphereMIRKLFVTAAACVALGAAMINAQTKTVPRPAALPPGQQPPGESATPDGYAPIPQWLGQTRAPVPAKTETFTVETF
Ga0207678_1075056513300026067Corn RhizosphereMSWFTHFPGGIMIRRSLVAAVCCVALSAVVAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPVPQWLGQTRAAVPAKVETFAVETFA
Ga0207708_1143046923300026075Corn, Switchgrass And Miscanthus RhizosphereMFRCVLVVGAVCLVAGVVLGGQAKTVPRPPAQAPGQAPAGESAAPDGYQPLPQWLGQTRAPAPAKTEAFTVQTFAEGLNGAAFQFLP
Ga0207676_1170686123300026095Switchgrass RhizosphereMIRRPFVAAALSVALGVAVVAQTRPVPRPAALPAGQQPPGESAAPDGYAPLPQWLGQTRAPAPAK
Ga0209998_1001747313300027717Arabidopsis Thaliana RhizosphereMIRRSLVVGVCCVALGTVLAAQTKIVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPMPAKV
Ga0268264_1076229313300028381Switchgrass RhizosphereMMRRVLVAGVPGIVAVMALSAGMAAAQTTVPRPPAQAPGQPQGESAAPDGYQPLPAWMGQTRAPAPAKSETFTVETF
Ga0307506_1033074713300031366SoilMIRRSLVAGVVCVAVSAVLGAQTKAVPRPPAQAPGQQPAGESAAPDGYQPLPQWLGQTRAPVPARTEAFAVETFAQGVNGAAFQFLPD
Ga0310887_1015171013300031547SoilMIRGSLVVSVCCVALGTVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPMPAK
Ga0310886_1026530633300031562SoilMSIRGCCYTFLGGIMIRRSLVVGVSCVALGTVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPMPAKVETFTVETFAQGVNGAAFQFL
Ga0310904_1116342913300031854SoilMIRCLLVVGVCCVALSAVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPAPAKIETFTVETFAQGVNGAAFQFLPD
Ga0310892_1067951623300031858SoilMIRRSLVVGVSCVALGTVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPMPAKVETFTVETFAQGVNGA
Ga0308174_1003868743300031939SoilMIDRVLGAGAVCLAMSVALGAQTKVVPRPPAMQPPAGDSAAPDGYQPLPQWVGQTRAPVPAATAAFTVETFAVGTNGAG
Ga0308176_1117791333300031996SoilMIDRVLGAGAVCLAMSVALGAQTKVVPRPPAMQPPAGDSAAPDGYQPLPQWVGQTRAPVPAATAAFTVETFAVGTNGAGF
Ga0308173_1052950913300032074SoilMIRRLLILSGLVCALSAVVMAQTTVVPRPPAQAPGPQPAGESAAPDGYQPLPQWLGQTRAPAPA
Ga0315912_1122493813300032157SoilMIRRSLVAATACAALCAVVVTAQTRVVPRAPAAPPGFPPGESAAPDGYQPIPQWLGQTHAPVPARTETFTVE
Ga0310896_1009711813300032211SoilMSIRGCCYTFLGGIMIRRLLVVGVCCVALSTVLAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPLPLWLGQTRAPAPAKIETFTVETFAQGVNGAAF
Ga0310896_1064510513300032211SoilMFRCVLVVGAVCLVAGAVVNGQVKTVPRPPAQAPGQAPPGESAAPDGYQPLPQWLGQTRAPAPAKTEAFTVQTFAEGLNGAAFQF
Ga0335083_1042665913300032954SoilMIRKGLVAGVAVVALGAARMHAQIKPAPRPPAQTPGQQPQGESAAPDGYAPIPQWLGQTRAAVPAKTETFAVETFAE
Ga0247830_1050230423300033551SoilMSICEAGLKTRLYEGIMIRRSLVVGVCCVTLSAITAAQTKTVPRPPAQPAGQQPPGESAAPDGYQPVPQWLGQTRAAVPAKVET

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.