Metagenome Family F097638

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097638
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	56 residues
Representative Sequence	VSRRADLTSVVAGAAVVALGVLLLLDAVGTVDLRFGVLGPAACAALGAILLASGMSRPR
Number of Associated Samples	73
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	56.44 %
% of genes near scaffold ends (potentially truncated)	32.69 %
% of genes from short scaffolds (< 2000 bps)	86.54 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.077 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (41.346 % of family members)
Environment Ontology (ENVO)	Unclassified (47.115 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.53% β-sheet: 0.00% Coil/Unstructured: 57.47%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04024	PspC	61.54
PF09922	DUF2154	25.96
PF00196	GerE	2.88
PF13581	HATPase_c_2	2.88
PF00773	RNB	0.96
PF01668	SmpB	0.96
PF13683	rve_3	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0557	Exoribonuclease R	Transcription [K]	0.96
COG0691	tmRNA-binding protein	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG4776	Exoribonuclease II	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.08 %
Unclassified	root	N/A	26.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.08 %
Unclassified	root	N/A	26.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.08 %
Unclassified	root	N/A	26.92 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.19 %
Unclassified	root	N/A	26.92 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.19 %
Unclassified	root	N/A	26.92 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	54.81 %
Unclassified	root	N/A	26.92 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.96 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	47.12 %
Unclassified	root	N/A	26.92 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	5.77 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.96 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.92 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	14.42 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	5.77 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	2.88 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.92 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.92 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	13.46 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	5.77 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.88 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.92 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.92 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	13.46 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	5.77 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2.88 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.92 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.96 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.96 %
Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_13652110	Not Available	600	Open in IMG/M
3300002568\|C688J35102_119473522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	702	Open in IMG/M
3300003373\|JGI25407J50210_10085488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	782	Open in IMG/M
3300004156\|Ga0062589_100397812	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1117	Open in IMG/M
3300004156\|Ga0062589_101423443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	677	Open in IMG/M
3300004157\|Ga0062590_100640732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	943	Open in IMG/M
3300004463\|Ga0063356_100508372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1596	Open in IMG/M
3300004479\|Ga0062595_100113383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1479	Open in IMG/M
3300004480\|Ga0062592_102040858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	567	Open in IMG/M
3300004643\|Ga0062591_100180712	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1520	Open in IMG/M
3300004643\|Ga0062591_102274235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	565	Open in IMG/M
3300005093\|Ga0062594_102360479	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005441\|Ga0070700_101584583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	559	Open in IMG/M
3300005578\|Ga0068854_100929171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	766	Open in IMG/M
3300005981\|Ga0081538_10000252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	60660	Open in IMG/M
3300006196\|Ga0075422_10106391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1082	Open in IMG/M
3300006844\|Ga0075428_100214516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2079	Open in IMG/M
3300006844\|Ga0075428_100373999	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1528	Open in IMG/M
3300006845\|Ga0075421_101850557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	648	Open in IMG/M
3300006846\|Ga0075430_100807214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	773	Open in IMG/M
3300006918\|Ga0079216_10258411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1000	Open in IMG/M
3300007004\|Ga0079218_10072569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2247	Open in IMG/M
3300009094\|Ga0111539_10018088	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	8731	Open in IMG/M
3300009100\|Ga0075418_11001522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	904	Open in IMG/M
3300009789\|Ga0126307_10552468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	929	Open in IMG/M
3300009789\|Ga0126307_11023659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	667	Open in IMG/M
3300009840\|Ga0126313_10304936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1246	Open in IMG/M
3300009840\|Ga0126313_10841660	Not Available	747	Open in IMG/M
3300009840\|Ga0126313_11022098	Not Available	677	Open in IMG/M
3300010036\|Ga0126305_10076367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1964	Open in IMG/M
3300010036\|Ga0126305_10815945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	635	Open in IMG/M
3300010039\|Ga0126309_10006502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4594	Open in IMG/M
3300010039\|Ga0126309_10094859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1525	Open in IMG/M
3300010039\|Ga0126309_10170589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1184	Open in IMG/M
3300010039\|Ga0126309_10287437	Not Available	945	Open in IMG/M
3300010039\|Ga0126309_10656030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	668	Open in IMG/M
3300010040\|Ga0126308_10279564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1092	Open in IMG/M
3300010040\|Ga0126308_10343770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	987	Open in IMG/M
3300010403\|Ga0134123_12188055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300012355\|Ga0137369_10392190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1003	Open in IMG/M
3300012938\|Ga0162651_100036209	Not Available	740	Open in IMG/M
3300015373\|Ga0132257_102547483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	665	Open in IMG/M
3300017965\|Ga0190266_10334908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	807	Open in IMG/M
3300018054\|Ga0184621_10265647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300018422\|Ga0190265_10003506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	10702	Open in IMG/M
3300018422\|Ga0190265_10111619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2590	Open in IMG/M
3300018422\|Ga0190265_10167234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2173	Open in IMG/M
3300018422\|Ga0190265_10402439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1467	Open in IMG/M
3300018429\|Ga0190272_10156067	Not Available	1580	Open in IMG/M
3300018429\|Ga0190272_11024218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	791	Open in IMG/M
3300018429\|Ga0190272_11334532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	716	Open in IMG/M
3300018429\|Ga0190272_12374182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14	574	Open in IMG/M
3300018432\|Ga0190275_13025066	Not Available	544	Open in IMG/M
3300018432\|Ga0190275_13095734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	538	Open in IMG/M
3300018465\|Ga0190269_10709196	Not Available	705	Open in IMG/M
3300018465\|Ga0190269_11277663	Not Available	584	Open in IMG/M
3300018465\|Ga0190269_11945924	Not Available	509	Open in IMG/M
3300018466\|Ga0190268_10092229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1377	Open in IMG/M
3300018466\|Ga0190268_11600693	Not Available	574	Open in IMG/M
3300018469\|Ga0190270_10019556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	4138	Open in IMG/M
3300018469\|Ga0190270_10234143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1583	Open in IMG/M
3300018469\|Ga0190270_10876664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	913	Open in IMG/M
3300018469\|Ga0190270_12401621	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300018469\|Ga0190270_12436667	Not Available	585	Open in IMG/M
3300018469\|Ga0190270_13191176	Not Available	519	Open in IMG/M
3300018476\|Ga0190274_13554008	Not Available	526	Open in IMG/M
3300018481\|Ga0190271_10179713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2081	Open in IMG/M
3300019767\|Ga0190267_10273984	Not Available	854	Open in IMG/M
3300019868\|Ga0193720_1030119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300020005\|Ga0193697_1026317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300022756\|Ga0222622_10452211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	912	Open in IMG/M
3300025899\|Ga0207642_10416865	Not Available	807	Open in IMG/M
3300026075\|Ga0207708_10666811	Not Available	887	Open in IMG/M
3300027907\|Ga0207428_10220637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1421	Open in IMG/M
3300027909\|Ga0209382_11568843	Not Available	653	Open in IMG/M
3300028705\|Ga0307276_10135117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	619	Open in IMG/M
3300028705\|Ga0307276_10150274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	592	Open in IMG/M
3300028713\|Ga0307303_10068471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	777	Open in IMG/M
3300028716\|Ga0307311_10133535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300028719\|Ga0307301_10285311	Not Available	541	Open in IMG/M
3300028720\|Ga0307317_10170681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	732	Open in IMG/M
3300028722\|Ga0307319_10053923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1264	Open in IMG/M
3300028722\|Ga0307319_10097704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	940	Open in IMG/M
3300028722\|Ga0307319_10230070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	609	Open in IMG/M
3300028744\|Ga0307318_10328068	Not Available	538	Open in IMG/M
3300028755\|Ga0307316_10300201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	587	Open in IMG/M
3300028771\|Ga0307320_10253099	Not Available	695	Open in IMG/M
3300028811\|Ga0307292_10194904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	831	Open in IMG/M
3300028814\|Ga0307302_10513977	Not Available	595	Open in IMG/M
3300028824\|Ga0307310_10156034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1056	Open in IMG/M
3300028876\|Ga0307286_10113669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	957	Open in IMG/M
3300028889\|Ga0247827_10303805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	932	Open in IMG/M
3300028889\|Ga0247827_10538410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	737	Open in IMG/M
3300031447\|Ga0272435_1000350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	78187	Open in IMG/M
3300031548\|Ga0307408_101743258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	594	Open in IMG/M
3300031824\|Ga0307413_11823298	Not Available	545	Open in IMG/M
3300031852\|Ga0307410_12066395	Not Available	509	Open in IMG/M
3300031995\|Ga0307409_101560398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	688	Open in IMG/M
3300032205\|Ga0307472_102441392	Not Available	531	Open in IMG/M
3300034151\|Ga0364935_0118071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	825	Open in IMG/M
3300034690\|Ga0364923_0233482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	501	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.81%
Host-Associated	Host-Associated	20.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.92%
Plants	Host-Associated → Plants	20.19%
Aquatic	Environmental → Aquatic	2.88%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.85%
Sediment	Environmental → Aquatic → Sediment	1.92%
Floodplain	Environmental → Terrestrial → Floodplain	1.92%
Roots	Host-Associated → Plants → Roots	1.92%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.96%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.42%
Loam	Environmental → Terrestrial → Soil → Loam	2.88%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.92%
Ice	Environmental → Aquatic → Freshwater → Ice	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	56.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.92%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	41.35%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	13.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	7.69%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	4.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.92%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	1.92%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.96%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012183	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ469 (22.06)	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012938	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t2i015	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031447	Rock endolithic microbial communities from Victoria Land, Antarctica - Ricker Hills nord	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_136521102	3300000363	Soil	VRPDLTSLVAGACLLGLGLLLLLDGTGTLDLRLAGFAPAACAALGAILLASGMTRPR*
C688J35102_1194735222	3300002568	Soil	VVAGAALVGLGVLLLLDAGGTVDLHFGVLGPAVCAALGAILLASGMTRPR*
JGI25407J50210_100854881	3300003373	Tabebuia Heterophylla Rhizosphere	LVAGIAVAALGVILLLDSTGAVDLQFGVLGPVACAAAGAILLARGLSRRG*
Ga0062589_1003978121	3300004156	Soil	VSRRADLTSAVAGAAVIALGVLLLLDATGSVDLRFGVLGPAVCAALGAILLASGMSRPR*
Ga0062589_1014234432	3300004156	Soil	MKPVRRSADPASLVAGIAVLALGVLLLLDATGTFDLRFGVLGPVVCAATGAILLASGMTRRR*
Ga0062590_1006407321	3300004157	Soil	VVAGAAVVALGVLLLLDAGGTLDLHFGVLGPVVCAALGAILL
Ga0063356_1005083723	3300004463	Arabidopsis Thaliana Rhizosphere	VRRSPDLTSVVAGICVAALGVLLLLDAAGTFDLRFAVLGPAACAAVGAILLASGLSRPR*
Ga0062595_1001133832	3300004479	Soil	VSRKADLTSVVAGAAVVALGVLLLLDAVGTLDLRFGVFGPAACAALGAILLASGMSRPR*
Ga0062592_1020408582	3300004480	Soil	RPASSSRIPAVSRRADLTSVVAGAAVVALGVLLLLDAGGTLDLHFGVLGPVVCAALGAILLASGLSRPR*
Ga0062591_1001807122	3300004643	Soil	MKPVRRSADPASLVAGIAVLALGVLLLLDASGTLDLRFGVLGPVVCAATGAILLASGMTR
Ga0062591_1022742352	3300004643	Soil	VVAGAAVVALGVLLLLDAGGTLDLHFGVLGPVVCAALGAILLASGLSRPR*
Ga0062594_1023604792	3300005093	Soil	VVVALGVLLLLDAGDTLDLHFGVLGPVVCAALGAILLASGMSRPR*
Ga0070700_1015845831	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RRADLTSVVAGAAVVALGVLLLLDAGGTLDLHFGVLGPVVCAALGAILLASGLSRPR*
Ga0068854_1009291712	3300005578	Corn Rhizosphere	VSRSADVTSIVSGLCVLALGVLLLLDANGTVNLSFAVLGPVACASLGAMLLASGMTRPR*
Ga0081538_1000025251	3300005981	Tabebuia Heterophylla Rhizosphere	VSRDRPDVPSLVAGIAVAALGVILLLDSTGAVDLQFGVLGPVACAAAGAILLARGLSRRG
Ga0075422_101063911	3300006196	Populus Rhizosphere	TSVVAGAAVVALGVLLLLDAGGTLDLHFGVLGPVVCAALGAILLASGLSRPR*
Ga0075428_1002145162	3300006844	Populus Rhizosphere	VRPDLTSLVAGASILAVGVVLLLDASGTLDLRLSGFVPLACAAVGAILVASGMTRPR*
Ga0075428_1003739992	3300006844	Populus Rhizosphere	PVRRSPDLTSVVAGICVAALGVLLLLDAAGTFDLRFAVLGPAACAAVGAILLASGLSRPR
Ga0075421_1018505572	3300006845	Populus Rhizosphere	VRRSPDLTSVVAGICVAALGVLLLLDAAGSFDLRFAVLGPAACAAVGAILLASGLSRPR*
Ga0075430_1008072142	3300006846	Populus Rhizosphere	ISTSARNSPTSSGRTPPVRRSPDLTSVVAGICVAALGVLLLLDAAGTFDLRFAVLGPAACAAVGAILLASGLSRPR*
Ga0079216_102584112	3300006918	Agricultural Soil	VTSLVAGLCVVALGVLLLLDASGTFDLRFSVLAPAACAAMGAILLASGLTRPR*
Ga0079218_100725692	3300007004	Agricultural Soil	VTSLVAGLCVVALGVLLLLDASGTFDLRFSVLAPAGCAAMGAILLASGLTRPR*
Ga0111539_100180883	3300009094	Populus Rhizosphere	VSRRADLTSVVAGAAVVALGVLLLLDAGGTLDLHFGVLGPVVCAALGAILLASGLSRPR*
Ga0075418_110015222	3300009100	Populus Rhizosphere	LVAGICVAGLGVLLLLDASDTLDLRFAVLGPAVCAALGAILLASGMTRPR*
Ga0111538_101357695	3300009156	Populus Rhizosphere	GVLLLLDAGGTLDLHFGVLGPVVCAALGAILLASGLSRPR*
Ga0126307_105524682	3300009789	Serpentine Soil	VPRRPDLTSVVAGVCVIGLGVVLLLDATGTLELRFAVLAPAACAALGAILVASGMTRPR*
Ga0126307_110236592	3300009789	Serpentine Soil	VRRRPDLTSVVAGACVVALGVVLLIDATGTVDLRFGVLAPAVCAALGAILLASGLTRPR*
Ga0126313_103049362	3300009840	Serpentine Soil	VFAKPDITSVVAGVCIVALGLLLLLDGTGTADLRFGVLAPACCAAVGAILLASGMGRPR*
Ga0126313_108416602	3300009840	Serpentine Soil	VRPDLTSLVAGASILVVGVILLLDADGALDLRLSGFAPLACAAVGATLVASGMTRPR*
Ga0126313_110220982	3300009840	Serpentine Soil	VPRRPDLTSLVAGACVSALGGVLLLDAVGTFDLSFGVFGPVACAAVGAILLASGMSRPR*
Ga0126305_100763672	3300010036	Serpentine Soil	VTRSPDPTSVAAGIAVLALGVLLLLDASSTLELSFGVLAPAACAATGAILLASGMTRRR*
Ga0126305_108159452	3300010036	Serpentine Soil	VRSRPDVTSLVAGVCVAGLGVLLLLDAVGTFALRFAVLAPAACAALGAVLLASGMTRPR*
Ga0126309_100065023	3300010039	Serpentine Soil	VPRRPDLTSVVAGACVAALGVLLLIDATGTIELRFGVLGPAACAALGAILLTSGLTRPR*
Ga0126309_100948592	3300010039	Serpentine Soil	VRRSPDLTSVVAGICVAALGVLLLLDAAGTFDLRFAVLAPAGCAAVGAILLASGLSRPR*
Ga0126309_101705891	3300010039	Serpentine Soil	VAGACVVALGVLLLTDATGTVDLRFGVLAPAVCAALGAILLTSGLTRPR*
Ga0126309_102874372	3300010039	Serpentine Soil	VTPRPDLTSLVAGACVSALGVVLLLDAVGTFDLSFGVLGPVACAAVGAILLASGMSRPR*
Ga0126309_106560302	3300010039	Serpentine Soil	IPAVPRRPDITSVVAGVCVAALGMLLLVDATGTIELRLGVLAPAVCAALGAILLASGMTRPR*
Ga0126308_102795642	3300010040	Serpentine Soil	VPRRPDLTSLVAGACVAALGVVLLLDAVDVFDLSFGVLGPAACAAVGAILLASGMSRPR*
Ga0126308_103437701	3300010040	Serpentine Soil	AAGLGVLLLLDAVGTFALRFAVLAPAACAALGAVLLASGMTRPR*
Ga0134123_121880552	3300010403	Terrestrial Soil	VIALGVLLLLDATGSVDLRFGVLGPAVCAALGAILLASGMSRPR*
Ga0136624_10005152	3300012183	Polar Desert Sand	VVLLGFGVMLLLDSVGTFDLRFGTLAPLVCAALGAILFALGLSRRA*
Ga0137369_103921902	3300012355	Vadose Zone Soil	MTSVVAGMCVLALGVLLLRAATDAGELRFGVLAPAGCAAIGAILLASGMSRPR*
Ga0162651_1000362092	3300012938	Soil	VSHRADLTSVVAGAAVIALGVLLLLDAGDTLDLHFGVLGPVVCAALGAILLASGMSRPR*
Ga0132257_1025474831	3300015373	Arabidopsis Rhizosphere	RPASSSRIPAVSRRADLTSVVAGAAVVALGVLLLLDAGGTVDLHFGVLGPVVCAALGAILLASGLSRPR*
Ga0190266_103349082	3300017965	Soil	VRRRPDITSLVAGICVAGLGVLLLLDAADTLDLRFAVLGPAVCAALGAILLASGMTRPR
Ga0184621_102656472	3300018054	Groundwater Sediment	VVAGIAVLALGVLLLLDASGALELRFNVLAPAACAATGAILLASGMTRRR
Ga0190265_100035063	3300018422	Soil	VVAGIAVLALGVLLLLDAVGTLDLRFKLLGPVGCAAMGAILLASGLTRRQ
Ga0190265_101116192	3300018422	Soil	VTRSPDPTSLIAGVAVLALGVLLLLDAGGTLDLRFAVLAPVGCAAAGAVLLASGMTRRR
Ga0190265_101672342	3300018422	Soil	VTSVVAGVCVAALGVLLLTDATGAIELRFGVLAPAACAALGAILLASGMTRPR
Ga0190265_104024391	3300018422	Soil	TTPVRPSPDPTSVVAGIAVLALGVLLLLDAAGTLDLRFGILGPAACAATGAILLASGMSRRR
Ga0190272_101560672	3300018429	Soil	VTRSPDPSSLVAGIAVLALGVLLLLDAGGTLDLRFAVLAPVGCAAAGAVLLASGMARRR
Ga0190272_110242181	3300018429	Soil	VTRSPDPTSLVAGVAVLALGVLLLLDAGGTLDLRFNVLAPVGCAAAGAVLLASGMARRR
Ga0190272_113345322	3300018429	Soil	VVAGIAVLALGMLLLLDASGTLDLRFGVLGPVACAAMGAILLASGMSRRR
Ga0190272_123741822	3300018429	Soil	VTRSPDPTSLIAGVAVLALGVLLLLDAGGTLDLRFAVLAPVGCAAAGAVRRGWPRVR
Ga0190275_130250661	3300018432	Soil	ATTTISDGTRPVSRSPDLTSLVAGVGIVGLGVLLLLDAAGSLDLRFRVLAPAACAVLGAILLASGMTRPR
Ga0190275_130957342	3300018432	Soil	VSRRPDITSLVAGACVIALGILLLVDATGASDLRFKVLGPAALAALGAILLASGMTRPR
Ga0190269_107091962	3300018465	Soil	MRPVRRSADPTSLVAGVAVLALGVLLLLDATGTFDLRFGVLGPVACAATGAILLASGMTRRR
Ga0190269_112776632	3300018465	Soil	LLLDAVDTLDLRVGVLAPVACAAMGAILLASGMTRRR
Ga0190269_119459241	3300018465	Soil	VRPSPDITSVVAGIGVLALGVLLLLDASGTLDLRFGVLAPAACAAMGAILLASGMTRPRW
Ga0190268_100922292	3300018466	Soil	MRPVRRSADTTSLVAGIAVLALGVLLLLDATGAFELSFGVLAPVTCAALGAILLASGMTRPR
Ga0190268_116006931	3300018466	Soil	VTRSPDPTSLVAGVAVLALGVLLLLDAGGTLDLRFGVLAPVGCAAAGAVLLASGMTRRR
Ga0190270_100195565	3300018469	Soil	VRPRPDVASVVAGACVVALGVVLLLDAAGTLDLRFKVFGPAVLAAMGAILLASGLTRPR
Ga0190270_102341433	3300018469	Soil	GVLLLLDAGGTLDLRFAVLAPVGCAAAGAVLLASGMARRR
Ga0190270_108766641	3300018469	Soil	VLALGVLLLLDAVDTLDLRFGVLAPVGCAATGAILLASGMTRRR
Ga0190270_124016212	3300018469	Soil	MSRACVTGLGVLLLLDAAGTFDLRFAVLAPAGCAALGAILLASGMTRPR
Ga0190270_124366672	3300018469	Soil	SAPTPAVSHRPDVTSLVAGVCIVALGLLLLLDASDALELRFAVLGPACFAALGAILVASGMSRPR
Ga0190270_131911761	3300018469	Soil	LGVLLLLDASGTLDLRFGVLGPAVCAAMGAILLASGMTRPR
Ga0190274_135540082	3300018476	Soil	IVVLALGVLLLLDAGGTLDLRFAVLGPVGCAAAGAVLLASGMARRR
Ga0190271_101797132	3300018481	Soil	VRPRPDVASVVAGVCVVALGVVLLLDAAGTLDLRFKVFGPAVLAAMGAILLASGLTRPR
Ga0190267_102739842	3300019767	Soil	VTRSPDPTSLVAGIAVLALGVLLLLDAGGTLDLRFAVLAPVGCAAAGAVLLASGMARRR
Ga0193720_10301192	3300019868	Soil	MPPVPHRADLTSAVAGAALIGLGVLLLLDASGTADLRFGVLGPAVCAALGAILLASGMSRPR
Ga0193697_10263172	3300020005	Soil	VVAGLAVLALGVLLLLDASGTLDLRFAVLGPVACAATGAILLASGMARRR
Ga0222622_104522112	3300022756	Groundwater Sediment	VVAGIAVLALGVLLLLDASGALELRFNVLAPAACAATGAILLASGMTRRQ
Ga0207642_104168652	3300025899	Miscanthus Rhizosphere	VVAGAAVVALGVLLLLDAGGTLDLHFGVLGPVVCAALGAILLASGLSRPR
Ga0207708_106668111	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	SARTRPASSSRIPAVSRRADLTSVVAGAAVVALGVLLLLDAGGTLDLHFGVLGPVVCAALGAILLASGLSRPR
Ga0207428_102206372	3300027907	Populus Rhizosphere	VRPDLTSLVAGASILAVGVVLLLDASGTLDLRLSGFVPLACAAVGAILVASGMTRPR
Ga0209382_115688432	3300027909	Populus Rhizosphere	VRRSPDLTSVVAGICVAALGVLLLLDAAGSFDLRFAVLGPAACAAVGAILLASGLSRPR
Ga0307276_101351172	3300028705	Soil	HTSTSAPSLPASSTRIPAVSRRADLTSLVAGLAVVALGVLLLLDAGGTLDLRLGVFGPAACAALGAILLASGMSRPR
Ga0307276_101502741	3300028705	Soil	ALGVLLLLDATDTVDLRLGVLGPAVCAALGAILLASGMSRPR
Ga0307303_100684712	3300028713	Soil	MPPVPRRADLTSAVAGAALIGLGVLLLLDASGTADLRFGVLGPAVCAALGAILLASGMSRPR
Ga0307311_101335352	3300028716	Soil	VSRRADLTSLVAGLAVVALGVLLLLDAGGTLDLRLGVFGPAACAALGAILLASGMSRPR
Ga0307301_102853112	3300028719	Soil	RSSDETRPVPRSPDPTSLVAGIAVLALGVLLLLDAGGTLDLRFAVLAPVGCAAAGAILLASGMTRRR
Ga0307317_101706812	3300028720	Soil	VSRRADLTSVVAGAAVVALGVLLLLDAVGTVELRFGVLGPAACAALGAILLASGMSRPR
Ga0307319_100539232	3300028722	Soil	MKPVRRSADPASLVAGIAVLALGVLLLLDAGGTFDLRFAVLAPVGCAAAGAILLASGMTRRR
Ga0307319_100977042	3300028722	Soil	SNATRPVRHSPDPTSVVAGIAVLALGVLLLLDGSGTLELRFNVLAPAACAATGAILLASGMTRRR
Ga0307319_102300702	3300028722	Soil	AGICVAGLGVLLLLDAAETLDLRFAVLGPAVCAALGAILLASGMTRPR
Ga0307318_103280682	3300028744	Soil	VPRSPDPTSLVAGIAVLALGVLLLLDAGGTFDLRFAVLAPVGCAAAGAILLASGMTRRR
Ga0307316_103002011	3300028755	Soil	ADLTSVVAGAAVVALGVLLLLDAVGTVELRFGVLGPAACAALGAILLASGMSRPR
Ga0307320_102530991	3300028771	Soil	LGTLLLLDAGGVLDLHFGVLGPAACAALGAILLASGMSRPR
Ga0307292_101949042	3300028811	Soil	VLLLLDAGGTLDLRLGVFGPAACAALGAILLASGMSRPR
Ga0307302_105139772	3300028814	Soil	VVAGIAVLALGVLLLLDASGTFDLRFGVLAPAACAAMGAILLASGMTRPR
Ga0307310_101560342	3300028824	Soil	RFRPASIRMPPVPRRADLTSAVAGAALIGLGVLLLLDASGTADLRFGVLGPAVCAALGAILLASGMSRPR
Ga0307286_101136692	3300028876	Soil	VPRSPDPTSLVAGIAVLALGVLLLLDAGGTLDLRFAVLAPVSCAAAGAILLASGMTRRR
Ga0247827_103038051	3300028889	Soil	VVAGAAVVALGVLLLLDAGGTLDLHFGVLGPVVCAALGAILLASGL
Ga0247827_105384101	3300028889	Soil	RRGRAGAAVVALGVLLLLDAGGTLDLHFGVLGPVVCAALGAILLASGLSRPR
Ga0272435_100035038	3300031447	Rock	MSPRGRPQVPVLVAGLALVGLGVLLLLDATGAVALRFGWLAPAVCAVLGAALLAAGLTRR
Ga0307408_1017432581	3300031548	Rhizosphere	VRRSADLTSVVAGICVAALGVLLLLDAAGTFDLRFAVLGPAACAAMGAILLASGLSRPR
Ga0307413_118232982	3300031824	Rhizosphere	MRPVRRSADPTSLVAGIAVLALGVLLLLDATGTRELRFGVLAPAACAAMGAILLASGMTRPR
Ga0307410_120663951	3300031852	Rhizosphere	IVGLGLLLLLDGTGASDLRFGVLGPAWCAAIGAILLASGMSRPR
Ga0307412_103894252	3300031911	Rhizosphere	GALVLLDAAGTFDLRFAVLGPAACAAMGAILLASGLSRPR
Ga0307409_1015603982	3300031995	Rhizosphere	VRRSADLTSVVAGICVAALGVLLLLDAAGTFDLRFAVLGPAACAAMGAILLASGMSRPR
Ga0307472_1024413921	3300032205	Hardwood Forest Soil	VSRRADLTSVVAGAAVVALGVLLLLDAVGTVDLRFGVLGPAACAALGAILLASGMSRPR
Ga0364935_0118071_473_652	3300034151	Sediment	VTRSPDPTSLVAGVAVLALGVLLLFDAGGTLDLRFAVLAPVGCAAAGAVLLASGMTRRR
Ga0364923_0233482_373_501	3300034690	Sediment	VVAGIAVLALGVLLLLDASGTLDLRFEVLGPAACAATGAILLA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097638

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences