Metagenome / Metatranscriptome Family F097629

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F097629
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	72 residues
Representative Sequence	MMTNLAPPQIRAITGLELAAGVFTKCSDGLASQLSVSLTSGRRDSGPREFRIGINGDVYGGMRAPIEV
Number of Associated Samples	96
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.06 %
% of genes near scaffold ends (potentially truncated)	96.15 %
% of genes from short scaffolds (< 2000 bps)	89.42 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (84.615 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (14.423 % of family members)
Environment Ontology (ENVO)	Unclassified (25.962 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.346 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.08% β-sheet: 0.00% Coil/Unstructured: 72.92%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00355	Rieske	23.08
PF02515	CoA_transf_3	9.62
PF09084	NMT1	7.69
PF01042	Ribonuc_L-PSP	2.88
PF13531	SBP_bac_11	1.92
PF12728	HTH_17	1.92
PF13426	PAS_9	0.96
PF01066	CDP-OH_P_transf	0.96
PF14706	Tnp_DNA_bind	0.96
PF10518	TAT_signal	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	9.62
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	7.69
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	7.69
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	2.88
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.96
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.96
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	84.62 %
Unclassified	root	N/A	15.38 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.42 %
Unclassified	root	N/A	15.38 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	60.58 %
Unclassified	root	N/A	15.38 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	60.58 %
Unclassified	root	N/A	15.38 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	59.62 %
Unclassified	root	N/A	15.38 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	59.62 %
Unclassified	root	N/A	15.38 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	59.62 %
Unclassified	root	N/A	15.38 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	59.62 %
Unclassified	root	N/A	15.38 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	59.62 %
Unclassified	root	N/A	15.38 %
Sphaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter	0.96 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	59.62 %
Unclassified	root	N/A	15.38 %
Sphaerobacter thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig1195308	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	655	Open in IMG/M
3300000789\|JGI1027J11758_12302387	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	529	Open in IMG/M
3300000956\|JGI10216J12902_111519887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	650	Open in IMG/M
3300001431\|F14TB_100028078	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	952	Open in IMG/M
3300004019\|Ga0055439_10244667	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	584	Open in IMG/M
3300004049\|Ga0055493_10020413	Not Available	1059	Open in IMG/M
3300004463\|Ga0063356_102727761	Not Available	760	Open in IMG/M
3300005327\|Ga0070658_10029165	All Organisms → cellular organisms → Bacteria	4432	Open in IMG/M
3300005329\|Ga0070683_101681999	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	610	Open in IMG/M
3300005330\|Ga0070690_100432063	All Organisms → cellular organisms → Bacteria → Proteobacteria	973	Open in IMG/M
3300005332\|Ga0066388_101528936	All Organisms → cellular organisms → Bacteria	1169	Open in IMG/M
3300005335\|Ga0070666_11287486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	545	Open in IMG/M
3300005336\|Ga0070680_100460453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1086	Open in IMG/M
3300005438\|Ga0070701_10967494	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005451\|Ga0066681_10743470	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	595	Open in IMG/M
3300005467\|Ga0070706_101347261	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	654	Open in IMG/M
3300005536\|Ga0070697_101563111	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	590	Open in IMG/M
3300005546\|Ga0070696_100113823	Not Available	1951	Open in IMG/M
3300005557\|Ga0066704_10366254	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	964	Open in IMG/M
3300005616\|Ga0068852_102317034	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300005713\|Ga0066905_101223158	Not Available	672	Open in IMG/M
3300006196\|Ga0075422_10342835	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	649	Open in IMG/M
3300006844\|Ga0075428_100147234	All Organisms → cellular organisms → Bacteria → Proteobacteria	2559	Open in IMG/M
3300006845\|Ga0075421_100250274	All Organisms → cellular organisms → Bacteria	2172	Open in IMG/M
3300006845\|Ga0075421_100729962	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1148	Open in IMG/M
3300006847\|Ga0075431_100618465	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1066	Open in IMG/M
3300006853\|Ga0075420_101191425	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300006894\|Ga0079215_10875734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	640	Open in IMG/M
3300006969\|Ga0075419_10361672	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	988	Open in IMG/M
3300007076\|Ga0075435_100297343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1380	Open in IMG/M
3300009012\|Ga0066710_100194085	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2883	Open in IMG/M
3300009081\|Ga0105098_10342768	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	728	Open in IMG/M
3300009162\|Ga0075423_10843073	All Organisms → cellular organisms → Bacteria	970	Open in IMG/M
3300009162\|Ga0075423_11301603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	777	Open in IMG/M
3300009162\|Ga0075423_11540188	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	714	Open in IMG/M
3300009815\|Ga0105070_1135127	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	503	Open in IMG/M
3300009822\|Ga0105066_1058032	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300010166\|Ga0126306_10968361	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	692	Open in IMG/M
3300010360\|Ga0126372_11207177	Not Available	781	Open in IMG/M
3300010362\|Ga0126377_10569944	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300010366\|Ga0126379_13863601	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300010375\|Ga0105239_11076804	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	925	Open in IMG/M
3300010397\|Ga0134124_11115945	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	806	Open in IMG/M
3300010397\|Ga0134124_11355203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	736	Open in IMG/M
3300010399\|Ga0134127_11958734	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	663	Open in IMG/M
3300011445\|Ga0137427_10345811	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	624	Open in IMG/M
3300012039\|Ga0137421_1094664	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300012172\|Ga0137320_1079492	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300012203\|Ga0137399_11396229	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	586	Open in IMG/M
3300012910\|Ga0157308_10417483	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	525	Open in IMG/M
3300012930\|Ga0137407_11209192	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300013306\|Ga0163162_12530010	All Organisms → cellular organisms → Bacteria	590	Open in IMG/M
3300013308\|Ga0157375_11924871	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300015371\|Ga0132258_13910218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1013	Open in IMG/M
3300016270\|Ga0182036_10670574	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	837	Open in IMG/M
3300017930\|Ga0187825_10171109	Not Available	774	Open in IMG/M
3300018053\|Ga0184626_10125527	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1091	Open in IMG/M
3300018077\|Ga0184633_10039084	All Organisms → cellular organisms → Bacteria	2398	Open in IMG/M
3300018077\|Ga0184633_10223059	Not Available	972	Open in IMG/M
3300018422\|Ga0190265_10893314	Not Available	1011	Open in IMG/M
3300018422\|Ga0190265_11619751	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	759	Open in IMG/M
3300018476\|Ga0190274_10369084	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300018481\|Ga0190271_13448810	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300020084\|Ga0194110_10613153	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300020195\|Ga0163150_10250157	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300025535\|Ga0207423_1096547	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300025558\|Ga0210139_1135370	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300025780\|Ga0210100_1000831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2987	Open in IMG/M
3300025909\|Ga0207705_10660352	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	813	Open in IMG/M
3300025931\|Ga0207644_11801520	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	512	Open in IMG/M
3300025961\|Ga0207712_11305728	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	648	Open in IMG/M
3300025971\|Ga0210102_1044242	Not Available	962	Open in IMG/M
3300026071\|Ga0208537_1005732	Not Available	1660	Open in IMG/M
3300026090\|Ga0208912_1017246	Not Available	1019	Open in IMG/M
3300026118\|Ga0207675_101649408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	661	Open in IMG/M
3300027360\|Ga0209969_1013999	Not Available	1165	Open in IMG/M
3300027561\|Ga0209887_1007889	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2883	Open in IMG/M
3300027639\|Ga0209387_1146424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	616	Open in IMG/M
3300027665\|Ga0209983_1170066	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300027765\|Ga0209073_10238746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	703	Open in IMG/M
3300027840\|Ga0209683_10316856	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	717	Open in IMG/M
3300027907\|Ga0207428_10310518	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1166	Open in IMG/M
3300027907\|Ga0207428_10990946	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300027907\|Ga0207428_11310301	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300027909\|Ga0209382_11996453	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	557	Open in IMG/M
3300028792\|Ga0307504_10461384	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300030619\|Ga0268386_10242480	Not Available	1330	Open in IMG/M
3300031199\|Ga0307495_10025891	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1037	Open in IMG/M
3300031455\|Ga0307505_10202207	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300031573\|Ga0310915_11035031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	572	Open in IMG/M
3300031716\|Ga0310813_11131700	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	719	Open in IMG/M
3300031744\|Ga0306918_10142115	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1764	Open in IMG/M
3300031858\|Ga0310892_11113447	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300031908\|Ga0310900_10924858	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300031943\|Ga0310885_10537584	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	641	Open in IMG/M
3300032000\|Ga0310903_10418287	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300032013\|Ga0310906_10575936	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	773	Open in IMG/M
3300032174\|Ga0307470_11451550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	568	Open in IMG/M
3300032180\|Ga0307471_100006580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	7395	Open in IMG/M
3300033412\|Ga0310810_10832323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	826	Open in IMG/M
3300034354\|Ga0364943_0283313	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.15%
Host-Associated	Host-Associated	28.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.85%
Plants	Host-Associated → Plants	28.85%
Aquatic	Environmental → Aquatic	17.31%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.12%
Marine	Environmental → Aquatic → Marine	6.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.73%
Sediment	Environmental → Aquatic → Sediment	5.77%
Freshwater	Environmental → Aquatic → Freshwater	4.81%
Floodplain	Environmental → Terrestrial → Floodplain	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.31%
Loam	Environmental → Terrestrial → Soil → Loam	9.62%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.77%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.81%
Sand	Environmental → Terrestrial → Soil → Sand	2.88%
Lake	Environmental → Aquatic → Freshwater → Lake	1.92%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.73%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.77%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.96%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	14.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.54%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.85%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.88%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.88%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.88%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.88%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.88%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.96%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.96%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.96%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.96%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.96%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004049	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300020084	Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015032 Kigoma Deep Cast 1200m	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300021859	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.306 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025535	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1 (SPAdes)	Environmental	Open in IMG/M
3300025558	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025780	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025971	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300026071	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026090	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027360	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027665	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_03537310	2124908045	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSDRLATQLSISLTSGRRDQGPAEFRIGINGDIFGGMRAPVEVGT
JGI1027J11758_123023872	3300000789	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSDGLATQLNVSLTSGKRDPGPTEFRXGINGDVYGGMLAPIQVGKRRVDIAYVNPSAMVA
JGI10216J12902_1115198872	3300000956	Soil	MMTNLAPPQIRATTGLEIAAGIFTKCSDQLASQLSVSLTSGRREAKQIALRVGINGDVYGGMRAPVEVGTRRVDIAYVNPSALVAMA
F14TB_1000280781	3300001431	Soil	MISNIAPPQIRATTGLELAAGLFTKCSDELATQLMVSLTSGQKESAQTPLRIGINGDVYGGMRAPVEVGTRRVDIAYVNPSAMV
Ga0055439_102446671	3300004019	Natural And Restored Wetlands	MMTKLEPPQIRATTGLELATGVFAKCSDGLAKQLNISLTSGRRESGLREFRIGINGDIYGGMQAPIEVGT
Ga0055493_100204132	3300004049	Natural And Restored Wetlands	MMTDLSPPQIRGMTGLELAAGLFAKCSDQLATQLKISLTSGKKDAGPLPFSIGINGDVYGGMRAPLEV
Ga0063356_1027277611	3300004463	Arabidopsis Thaliana Rhizosphere	MLTHLAPPQIRATTGLELAAGVFAKCSDQLASQLALSLTSGKKDAKQTLLRIGINGDIYGGMRAP
Ga0070658_100291654	3300005327	Corn Rhizosphere	MMTNLAPPQIRAITGLELAAGVFSKCSERLATQLSISLTSGRRDQGPTEFRIGINGDV
Ga0070683_1016819991	3300005329	Corn Rhizosphere	MMTNLAPPQIRAITGLELAAGVFSKCSERLATQLSISLTSGRRDQGPTEFRIGINGDVYGGMRAP
Ga0070690_1004320632	3300005330	Switchgrass Rhizosphere	MMTDLAPPQIRAITGLELAAGIFTKCSDKLASQLSIALTSGRRESGRPEFRVGINGDVYGGVLAP
Ga0066388_1015289362	3300005332	Tropical Forest Soil	MISKIAPPQIRATTGLEIAAGLFAKCSDELATQLTISLTSGRRESKQTPLRIGINGDVYGGIRAPIEVG
Ga0070666_112874862	3300005335	Switchgrass Rhizosphere	MMTDLAPPQIRAITGLELAAGIFTKCSDKLASQLSIALTSGRRESGRPEFRVGINGDVYGGVLAPLEVGT
Ga0070680_1004604531	3300005336	Corn Rhizosphere	MMTNLAPPQIRAITGLELAAGVFSKCSERLATQLSISLTSGRRDQGPTEFRIGINGDVYGGMRA
Ga0070659_1008206552	3300005366	Corn Rhizosphere	MMTNLAPPQIRAITGLELAAGVFTKCSERLATQLSIALTSGRRDQGPTEFRIGING
Ga0070701_109674942	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MMTHLEPPQIRAITGLELAAGVFTKCLDGLASQLNISLTAGRRQPGPTEFRIGINGDVYGGM
Ga0066681_107434702	3300005451	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSDGLATQLNVSLTSGKRDPGPTEFRIGINGDV
Ga0070706_1013472612	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VISTIAPPQIRATTGLELAAGLYTKCSSELASQLRIALTSGRKDSKQTALRIGINGDIMGGMRAPIEVGTR
Ga0070697_1015631112	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MISKIAPPQIRATTGLELAAGLFTKCSSELASQLSISLTSGKKDSKQTSLRIGINGDIYGGMR
Ga0070696_1001138233	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MMTNLAPPQIRATTGLELAAGIFTKCSAQLATQLNVSLSSGKRDAKQTPLRIGINGDVYGGMLAPLEVGTRRVDIAYVNP
Ga0066704_103662541	3300005557	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSDGLAAQLNVSLTSGKRDPGPTEFRIGINGDVY
Ga0068852_1023170341	3300005616	Corn Rhizosphere	MMTNLAPPQIRAITGLELAAGVFTKCSERLATQLSIALTSGRRDQGPTEFRIGINGDVYGGMRA
Ga0066905_1012231583	3300005713	Tropical Forest Soil	MISKIPPPQIRAATGLELAAGLFTKCADGLASQLTVSLTSGKKESAQTPLRIGINGDVYGGMRAPMEV
Ga0075422_103428351	3300006196	Populus Rhizosphere	MMTNLAPPQIRAITGLEVAAGVFTKCSDRLATQLSISLTSGRRDQGPTEFRIGINGDIFGGMRAPLEVGTRRVDIAYVNPAALVTIA
Ga0075428_1001472343	3300006844	Populus Rhizosphere	MISNIAPPQIRATTGLELAAGLFTKCSDELASQLMVSLTSDRKEAAQTPLRIGINGDVYGGMRAPVEVGTRRVDIAYVNPSAMVTMAYR
Ga0075421_1002502741	3300006845	Populus Rhizosphere	MMTKLEPPQIRATTGLELATGIFAKCSDGLAKQLNISLTAGKRESGTNEFRIGINGD
Ga0075421_1007299623	3300006845	Populus Rhizosphere	MMTNLAPPQIRAITGLEVAAGVFTKCSDRLATQLSISLTSGRRDQGPTEFRIGINGDIFGGMRAPLEVGTRRVDIAYV
Ga0075431_1006184652	3300006847	Populus Rhizosphere	MMTDLAPPQIRAITGLELAAGVFTKCSDGLATQLNVSLTSGKRDPGPTEFRIGINGDVYGGMRAPIE
Ga0075420_1011914252	3300006853	Populus Rhizosphere	MMTKLEPPQIRATTGLELAAGIFAKCSDGLAKQLNISLTAGKRESGTSEFRIGINGDIYG
Ga0079215_108757342	3300006894	Agricultural Soil	MISNIAPPQIRATTGLELAAGLFAKCSAELASQLAITLTSGKKESKQTSLCIGINGDVYGGM
Ga0075419_103616721	3300006969	Populus Rhizosphere	MMTKLEPPQIRATTGLELATGIFAKCSNGLAKQLNISLTSGKRESGTSEFRIGINGDIYGGLLAPVEVGTRKVDIAYVNPSALVAMAYLGKGIYQDKLPLRVLGC
Ga0075435_1002973431	3300007076	Populus Rhizosphere	MMTNLAPPQIRAITGLELAAGVFTKCSDGLASQLHVSLTSGKRDSGPTEFRIGINGDVYGGLRAPIEVGTRRV
Ga0066710_1001940852	3300009012	Grasslands Soil	MISKIAPPQIRATTGLELAAGIFTKCSDELATQLTVSLTSGKKDFNQTPLRIGINGDLMGGMRAPVEVGTRRVDIAYVNPSAMVAMAYR
Ga0105098_103427681	3300009081	Freshwater Sediment	MISNIAPPQIRATTGLELAAGLFTKCSSELASQLNISLTSGKSDSQPTSLRIGINGDLMGGVRAPIEIGQRRVDIAYVNPAAIVAMAFRGKGYYKQKMELRVL
Ga0075423_108430732	3300009162	Populus Rhizosphere	MISKIAPPQIRATTGLELAAGLFTKCSDELASQLTVSLTSGKKESAQTPLRIGINGDVYGGMKAPVEV
Ga0075423_113016032	3300009162	Populus Rhizosphere	MMTNLEPPQIRATTGLELAAGIFAKCSDGLAKQLSISLTAGKRENGTSEFRIGINGDIYGGLLAPVEVGTRKVDIAYVNPSAMVAMAYLGKGIYKHKLPL
Ga0075423_115401881	3300009162	Populus Rhizosphere	MMTNLAPPQIRAITGLELAAGVFTKCSDGLATQLNVSLTSSKRDSGPTEFRIGINGDVY
Ga0105070_11351271	3300009815	Groundwater Sand	MISKIAPPQIRATTGLELAAGLFTKCSDELASQLTVSLTSGKRESGQTPLRIGINGDVYGGMRAPVEVGT
Ga0105066_10580322	3300009822	Groundwater Sand	MISKIAPPQIRATTGLELAAGLFTKCSDELASQLTVSLTSGKRESGQTPLRIGINGDVYGGMKAPVEVGT
Ga0126306_109683611	3300010166	Serpentine Soil	MLTNLAPPQIRATTGLELAAGVFTKCSDQLASQLSVSLTSGKRDAKRTLLRIGINGDIYGGMRAPLEVGTRRVDIAYVN
Ga0126372_112071772	3300010360	Tropical Forest Soil	MISKIPPPQIRATTGLELAAGLFTKCADALASQLTVSLTSGKKESAQTPLRIGINGDVYGGMRAPMEVGTRR
Ga0126377_105699443	3300010362	Tropical Forest Soil	LTIVISKIPPPQIRATTGLELAAGLFTKCADALASQLTISLTSGRKESAQTPLRIGINGDVYGGMRAPVEVGTRRVDIAYVNPSAMVTMA
Ga0126379_138636011	3300010366	Tropical Forest Soil	MMTNLAPPQIRAITGLELAAGVFTKCSEQLATQLSISLTSGRRDQGPTEFRIGINGDIYGGVRAPLEVGTRRVDIAYVNPAALVTM
Ga0105239_110768041	3300010375	Corn Rhizosphere	MMTNLAPPQIRAITGLELAAGVFSKCSERLATQLSISLTSGRRDQGPTEFRIGINGDVYGGM
Ga0134124_111159451	3300010397	Terrestrial Soil	MMTNLAPPQIRAITGLELAAGVFTKCSERLATQLSIALTSGRRDQGPTEFRIGINGDVYGGMRAPIEVGTRRVD
Ga0134124_113552031	3300010397	Terrestrial Soil	VHDQAKERNIMLTQLAPPEIRATTGLELAAGVFTKCSDQLASQLSVSLTSGKKVAKQTPLRIGINGDIYGGMRAPLEVGTRRVDIAYVNPSALVAMAYRG
Ga0134127_119587342	3300010399	Terrestrial Soil	MMTKLEPPQIRATTGLELAAGIFARCSDGLAKQLSISLTAGKRESGTSEFRIGINGGIYGGLLAPVEVGTRKVDIAYVNPSAMVAMAYLGKGIYQDKLP
Ga0137427_103458111	3300011445	Soil	MMTKLEPPQIRATTGLELATGIFAKCSDGLAKQLNISLTAGKRESGTSEFRIGINGDIYGGLLASVEVGTRKVDIAYI
Ga0137421_10946641	3300012039	Soil	MISNIAPPQIRATTGLELAAGLYTKCSSELASQLSISLTSGRKDSKQTSLRIGINGDM
Ga0137320_10794921	3300012172	Soil	MMTKLEPPQIRATTGLELATGIFAKCSDGLAKQLSISLTSGKREKGMTEFRIGINGDIYG
Ga0137399_113962292	3300012203	Vadose Zone Soil	MMTNLAPPQIRAMTGLELAAGVFTKCSDGLATQLNVSLTSGKRDPGPTEFRIGINGDVYGGMLAPIEVGKR
Ga0157308_104174831	3300012910	Soil	MMTDLAPPQIRGMTGLELAAGVFAKCSDQLATQLKITLTSGAKDTGPLPFSIGINGDVYGGMRAP
Ga0137407_112091921	3300012930	Vadose Zone Soil	MISKIAPPQIRATTGLELAAGLFTKCSDELASQLTVSLTSGKKESAQTPLHIGINGD
Ga0163162_125300102	3300013306	Switchgrass Rhizosphere	MMTNLAPPQIRAITGLELAAGVFTKCWDGLASQLNIALTAGRREPGPTEFRIGINGDVYGGMLAPLEVGTRRVD
Ga0157375_119248712	3300013308	Miscanthus Rhizosphere	MMTNLAPPQIRAITGLELAAGVFTKCWDGLASQLNIALTAGRREPGPTEFRIGINGDIYGGMLAPLEVGTRRVDIAYVN
Ga0173483_102648261	3300015077	Soil	MMTNLAPPQIRAITGLELAAGVFSKCSERLATQLSISLTSGRRDQGPTEFRIGING
Ga0132258_139102181	3300015371	Arabidopsis Rhizosphere	MMTKLEPPQIRATTGLELAAGIFARCSDGLAKQLSISLTAGKRESGTSEFRIGINGDIYGGLLAPVEVGTRKVDIAYVNPSAM
Ga0182036_106705742	3300016270	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSEQLATQLSISLTSGRRDQGPTEFRIGINGDIYGGVRAPLEVGTRRVDIAYVNPA
Ga0187825_101711091	3300017930	Freshwater Sediment	MMTDLAPPQIRGITGLELAAGVFTKCSDQLATQLQISLTSGKRDSGPMALRIGINGDVYG
Ga0184626_101255271	3300018053	Groundwater Sediment	MLSNIAPPQIRAITGLELAAGLYTKCSSELASQLAVSLTSGRRESKALALRIGINGNVMGGLRAPTEVGTRRVDIAYVNPSAMVA
Ga0184633_100390843	3300018077	Groundwater Sediment	MMTNLAPPQIRAITGLELAAGVFTKCSDGLASQLSVSLTSGRRDSGPREFRIGINGDVYGGMRAPIEV
Ga0184633_102230591	3300018077	Groundwater Sediment	MMTDLAPPQIRAITGLELAAGVFTKCSNGLASQLSVSLTSGRRDSGPREFRIGINGDVYGGMRAPIEV
Ga0190265_108933142	3300018422	Soil	MMTDLAPPQIRAITGLELAAGVFAKCSDGLASQLSIALTSGKREPGPTEFRIGINGDLY
Ga0190265_116197511	3300018422	Soil	MLTQLAPPQIRATTGLELAAGVFTKCSHQLASQLSVSLTSGKRDAKQTLLRIGVNGDIYGGMRAPLEVGMRRVDIAYVNPASLVAMAYRGRGY
Ga0190274_103690841	3300018476	Soil	MMTKLEPPQIRATTGLELATGIFAKCSDGLAKQLNISLTAGKRESGTNEFRIGINGDIYGGLLAPVEVGTRKV
Ga0190271_134488102	3300018481	Soil	MMTKLEPPQIRATTGLELATGIFAKCSDGLAKQLNISLTAGKRESGTNEFRIGINGDIY
Ga0194110_106131531	3300020084	Freshwater Lake	MMTDLEPPQIRAITGLELAAGVFAKCSDSLATQLQVSLGLGKRDRGRTEFRIGINGDVYG
Ga0163150_102501572	3300020195	Freshwater Microbial Mat	MTNLALPQTKGITGLDLAIGVFTKCSDGLTSQLSVALTAGRRKRGPTEFRIGINGGLL
Ga0210334_101562331	3300021859	Estuarine	MMTDLAPPQIRGITGLELTAGLFSKCSDILATQLKISLTSGKKDAGPLPFSIGING
Ga0207423_10965471	3300025535	Natural And Restored Wetlands	MMTKLEPPQIRATTGLELATGIFAKCSDGLAKQLSISLTSGRRESGLREFRIGINGDIYGGMQAPIEVGMRR
Ga0210139_11353702	3300025558	Natural And Restored Wetlands	MMTKLEPPQIRATTGLELATGVFAKCSDGLAKQLNISLTSGRRESGLREFRIGINGDIYGGMQAPIEVGTR
Ga0210100_10008311	3300025780	Natural And Restored Wetlands	MLTNLAPPQIRATTGLELAAGVFAKCSQQLASQLSISLTSGKKEAKQMLLRIGINGDVYGGMRAPLEVGTRRVDI
Ga0207705_106603521	3300025909	Corn Rhizosphere	MMTNLAPPQIRAITGLELAAGVFSKCSERLATQLSISLTSGRRDQGPTEFRIGINGDVY
Ga0207644_118015201	3300025931	Switchgrass Rhizosphere	MMTNLAPPQIRAITGLELAAGVFTKCSERLATQLSIALTSGRRDQGPTEFRIGINGDVYGGMRAPVEVGTR
Ga0207712_113057282	3300025961	Switchgrass Rhizosphere	LELAAGIFARCSDGLAKQLSISLTAGKRESGTSEFRIGINGDIYGGLLAPVEVGTRKVDIAYVNPSAMVAMAYLGKGIYQD
Ga0210102_10442421	3300025971	Natural And Restored Wetlands	MMTDLSPPQIRGMTGLELAAGLFAKCSDQLATQLKISLTSGKKDAGPLPFSIGINGDVYG
Ga0208537_10057321	3300026071	Natural And Restored Wetlands	MLTHLAPPQIRATTGLELAAGVFTKCSDRLATQISVSLTSGKRDARQTELRIGINGDIYGGMRAPLEIGTRRVDIA
Ga0208912_10172461	3300026090	Natural And Restored Wetlands	MLTHLAPPQIRATTGLELAAGVFTKCSDRLATQISVSLTSGKRDARQTELRIGINGDIYGGMRAPLEIGRRRV
Ga0207675_1016494081	3300026118	Switchgrass Rhizosphere	MMTNLAPPQIRAITGLELAAGVFTKCSDGLATQLNVSLTSGKRDSGPTEFRIGINGDVYG
Ga0209969_10139992	3300027360	Arabidopsis Thaliana Rhizosphere	MLTNLAPPQIRATTGLELAAGVFAKCSLQLASQLTISLTSGKKEETKQTLLRIGINGDVY
Ga0209887_10078895	3300027561	Groundwater Sand	MISKIAPPQIRATTGLELAAGLFTKCSDELASQLTVSLTSGKRESGQTPLRIGINGDVYGGMKAPVEVG
Ga0209387_11464241	3300027639	Agricultural Soil	MLTHLAPPQIRATTGLELAAGVFTKCSDHLASQLSVSLTSGKKDAKQTLLRIGINGDIYGGMRAPLEVGTRRVDIAY
Ga0209983_11700661	3300027665	Arabidopsis Thaliana Rhizosphere	MLTNLAPPQIRGITGLELAAGVFSKCSDQLATQLQISLTSGKRDAGPLPLRIGINGDVYGGMRAPIEV
Ga0209073_102387462	3300027765	Agricultural Soil	MMTNLAPPQIRAITGLELAAGVFTKCSERLATQLSISLTSGRRDQGPTEFRIGINGDVYGGMRASIEVG
Ga0209683_103168562	3300027840	Wetland Sediment	MMTDLAPPQIRGMTGLELTAGLFAKCSDQLATQLKITLTSASKDPGAMPFSIGINGDVYGGMRAPLEVGMRRVDIAYVNPSAMVAMAPL
Ga0207428_103105182	3300027907	Populus Rhizosphere	MMTNLAPPQIRAITGLELAAGVFSKCSERLATQLSISLTSGRRDQGPTEFRIGINGDVYGGMRAPIE
Ga0207428_109909461	3300027907	Populus Rhizosphere	MMTNLAPPQIRAITGLELAAGVFTKCSDGLATQLNVSLTSGKRDSGPTEFRIGINGDVYGGMLAPIQVGKRRVDIAYVNPSAMVAMAYR
Ga0207428_113103011	3300027907	Populus Rhizosphere	MISKIAPPQIRATTGLELAAGLFTKCADALASQLTVSLTSGKRESGQTPLRIGINGDVYGGMRAPLEVGTRR
Ga0209382_119964531	3300027909	Populus Rhizosphere	MMTNLAPPQIRAITGLELAAGVFTKCSDRLATQLSISLTSGRRDQGPTEFRIGINGDIFGGMRAPLEV
Ga0307504_104613841	3300028792	Soil	MMTDLAPPQIRAITGLELAAGVFTKCSDGLASQLSVSLTSGERDSGRRAFRIGINGDIYGGMRAPLEVGTR
Ga0268386_102424801	3300030619	Soil	MLTHLAPPQIRATTGLELAAGVFTKCSDRLASQLTVSLTSGKRDARQTELRIGINGDIYGGMRAPLEIGTRRVDIAYVN
Ga0307495_100258912	3300031199	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSDGLATQLNVSLTSGKRDPGPTEFHIGINGDVYGGMLAPIQVGKRRVDIAYV
Ga0307505_102022072	3300031455	Soil	MITDLAPPQIRGITGLELTAGLFSKCSDLLATQLKISLTSGKKDAGPLPFSVGINGD
Ga0310915_110350311	3300031573	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSEQLATQLSISLTSGRRDQGPTEFRIGINGDIYGGVRAPLEVGTRRVDIAYVNPAALVTMAY
Ga0310813_111317001	3300031716	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSERLATQLSISLTSGRRNQGPTEFRIGINGDIY
Ga0306918_101421152	3300031744	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSEQLATQLSISLTSGRRDQGPTEFRIGINGDIYGGVRAPLEVGTRRVDIAY
Ga0310892_111134471	3300031858	Soil	MMTDLAPPQIRGMTGLELAAGVFAKCSDQLATQLKISLTSGKKDSGPLPFSMGINGDVYGGMRAPLEVGTRRIDIA
Ga0310900_109248582	3300031908	Soil	MISKIPPPQIRATTGLELAAGVFTKCSDELASQLTVSLTSGKKESAQMPLRIGINGDLNGGMRAPVEVDARRVDIA
Ga0310885_105375842	3300031943	Soil	MMTDLAPPQIRGMTGLELAAGVFAKCSDQLATQLKISLTSGKKDSGPLPFSMGINGDVYGGMRAPLEVGTRRVDIAYVNPSAMVAMAYRG
Ga0310903_104182872	3300032000	Soil	MISKIPPPQIRATTGLELAAGVFTKCSDELASQLTVSLTSGKKESAQMPLRIGVNGDLYGGMRAPVEVSARRVDIA
Ga0310906_105759361	3300032013	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSDGLATQLNVSLTSGKRDSGSTEFRIGINGDVYGGMLAPIQVGKRRVDI
Ga0307470_114515502	3300032174	Hardwood Forest Soil	MISNIAPPQIRATTGLELAAGLFTKCSDELATQLMVSLTSGQKESAQTPLRIGINGDVYGGMRAPVEVGTRRVDIAYVNPSAMVTMAY
Ga0307471_1000065808	3300032180	Hardwood Forest Soil	MISKIAPPQIRATTGLELAAGLFTKCSDELATQLTVSLTSGRRESKQTPLRIGINGDVYGGIRAPIE
Ga0310810_108323232	3300033412	Soil	MMTNLAPPQIRAITGLELAAGVFTKCSERLATQLSIALTSGRRDQGPTEFRIGINGDVYGGMRAPIEVGTRRVDIA
Ga0364943_0283313_427_624	3300034354	Sediment	MMTNLAPPQIRAITGLELAAGVFTKCWDGLASQLNIALTAGRREPGPTEFRIGINGDIYGGMLAPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097629

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences