Metagenome Family F097613

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097613
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	70 residues
Representative Sequence	MGATFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPKTFHAGRPAGLAAMTPDFTTYGR
Number of Associated Samples	57
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	34.62 %
% of genes from short scaffolds (< 2000 bps)	73.08 %
Associated GOLD sequencing projects	48
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.808 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (29.808 % of family members)
Environment Ontology (ENVO)	Unclassified (31.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (31.731 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.17% β-sheet: 19.79% Coil/Unstructured: 76.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00580	UvrD-helicase	42.31
PF13361	UvrD_C	12.50
PF01979	Amidohydro_1	9.62
PF00724	Oxidored_FMN	7.69
PF13245	AAA_19	4.81
PF03631	Virul_fac_BrkB	1.92
PF12762	DDE_Tnp_IS1595	1.92
PF07690	MFS_1	1.92
PF13480	Acetyltransf_6	0.96
PF12760	Zn_Tnp_IS1595	0.96
PF00437	T2SSE	0.96
PF13751	DDE_Tnp_1_6	0.96
PF07819	PGAP1	0.96
PF17147	PFOR_II	0.96
PF01850	PIN	0.96
PF00589	Phage_integrase	0.96
PF01300	Sua5_yciO_yrdC	0.96
PF01558	POR	0.96
PF01738	DLH	0.96
PF05708	Peptidase_C92	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	42.31
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	42.31
COG3973	DNA helicase IV	Replication, recombination and repair [L]	42.31
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	7.69
COG1902	2,4-dienoyl-CoA reductase or related NADH-dependent reductase, Old Yellow Enzyme (OYE) family	Energy production and conversion [C]	7.69
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.92
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.96
COG1014	Pyruvate:ferredoxin oxidoreductase or related 2-oxoacid:ferredoxin oxidoreductase, gamma subunit	Energy production and conversion [C]	0.96
COG1075	Triacylglycerol esterase/lipase EstA, alpha/beta hydrolase fold	Lipid transport and metabolism [I]	0.96
COG2267	Lysophospholipase, alpha-beta hydrolase superfamily	Lipid transport and metabolism [I]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.81 %
Unclassified	root	N/A	45.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.81 %
Unclassified	root	N/A	45.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.81 %
Unclassified	root	N/A	45.19 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	49.04 %
Unclassified	root	N/A	45.19 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.19 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	19.23 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.85 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.92 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.92 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.19 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	7.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.92 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.19 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.85 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.92 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.19 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.85 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.92 %
Acidihalobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Acidihalobacter	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.19 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.85 %
Desulfatirhabdium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium	1.92 %
Acidihalobacter yilgarnensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Acidihalobacter → Acidihalobacter yilgarnensis	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.19 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	7.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	6.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.85 %
Desulfatirhabdium butyrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	1.92 %
Acidihalobacter yilgarnensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Acidihalobacter → Acidihalobacter yilgarnensis	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003310\|D1draft_1019480	Not Available	2200	Open in IMG/M
3300003858\|Ga0031656_10069717	All Organisms → cellular organisms → Bacteria → Proteobacteria	1341	Open in IMG/M
3300003910\|JGI26437J51864_10006912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2525	Open in IMG/M
3300004048\|Ga0055494_10079392	Not Available	681	Open in IMG/M
3300004050\|Ga0055491_10117675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	673	Open in IMG/M
3300004780\|Ga0062378_10003813	Not Available	2244	Open in IMG/M
3300005833\|Ga0074472_10370242	All Organisms → cellular organisms → Bacteria → Proteobacteria	1539	Open in IMG/M
3300006224\|Ga0079037_100215436	All Organisms → cellular organisms → Bacteria → Proteobacteria	1734	Open in IMG/M
3300006224\|Ga0079037_100322804	Not Available	1439	Open in IMG/M
3300006224\|Ga0079037_101778794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	616	Open in IMG/M
3300006930\|Ga0079303_10546376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	504	Open in IMG/M
3300009078\|Ga0105106_10048176	All Organisms → cellular organisms → Bacteria → Proteobacteria	3150	Open in IMG/M
3300009082\|Ga0105099_10815845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	585	Open in IMG/M
3300009091\|Ga0102851_10240595	All Organisms → cellular organisms → Bacteria → Proteobacteria	1728	Open in IMG/M
3300009091\|Ga0102851_10434681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1331	Open in IMG/M
3300009091\|Ga0102851_12513246	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	589	Open in IMG/M
3300009091\|Ga0102851_12651399	Not Available	575	Open in IMG/M
3300009131\|Ga0115027_10112026	Not Available	1594	Open in IMG/M
3300009131\|Ga0115027_10195701	All Organisms → cellular organisms → Bacteria	1283	Open in IMG/M
3300009131\|Ga0115027_11609832	Not Available	537	Open in IMG/M
3300009131\|Ga0115027_11757553	Not Available	518	Open in IMG/M
3300009167\|Ga0113563_10922096	Not Available	999	Open in IMG/M
3300009167\|Ga0113563_11637746	Not Available	762	Open in IMG/M
3300009167\|Ga0113563_11786994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	731	Open in IMG/M
3300009179\|Ga0115028_10103905	All Organisms → cellular organisms → Bacteria → Proteobacteria	1618	Open in IMG/M
3300009179\|Ga0115028_10730725	Not Available	760	Open in IMG/M
3300009179\|Ga0115028_11514372	Not Available	570	Open in IMG/M
3300009179\|Ga0115028_11753017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	538	Open in IMG/M
3300009430\|Ga0114938_1099003	Not Available	1062	Open in IMG/M
3300009455\|Ga0114939_10009263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5373	Open in IMG/M
3300009506\|Ga0118657_10346704	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1975	Open in IMG/M
3300009506\|Ga0118657_11190346	Not Available	918	Open in IMG/M
3300009509\|Ga0123573_10014698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8889	Open in IMG/M
3300009509\|Ga0123573_10114147	All Organisms → cellular organisms → Bacteria → Proteobacteria	2744	Open in IMG/M
3300009509\|Ga0123573_10115745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3983	Open in IMG/M
3300009509\|Ga0123573_10134433	All Organisms → cellular organisms → Bacteria	2491	Open in IMG/M
3300009509\|Ga0123573_10262490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1683	Open in IMG/M
3300009509\|Ga0123573_11550303	Not Available	616	Open in IMG/M
3300009868\|Ga0130016_10005301	All Organisms → cellular organisms → Bacteria → Proteobacteria	26475	Open in IMG/M
3300009873\|Ga0131077_10003355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	54512	Open in IMG/M
3300009873\|Ga0131077_11500575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Acidihalobacter → Acidihalobacter yilgarnensis	554	Open in IMG/M
3300010412\|Ga0136852_10049793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	7754	Open in IMG/M
3300010412\|Ga0136852_10213174	Not Available	1928	Open in IMG/M
3300010997\|Ga0139324_1005685	All Organisms → cellular organisms → Bacteria	1979	Open in IMG/M
3300014319\|Ga0075348_1075917	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300022204\|Ga0224496_10360708	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300024056\|Ga0124853_1479355	All Organisms → cellular organisms → Bacteria → Proteobacteria	2132	Open in IMG/M
3300025130\|Ga0209594_1014315	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3024	Open in IMG/M
3300027683\|Ga0209392_1007582	All Organisms → cellular organisms → Bacteria	3232	Open in IMG/M
3300027715\|Ga0208665_10091724	Not Available	928	Open in IMG/M
3300027716\|Ga0209682_10003597	All Organisms → cellular organisms → Bacteria → Proteobacteria	4334	Open in IMG/M
3300027831\|Ga0209797_10046543	Not Available	1942	Open in IMG/M
3300027841\|Ga0209262_10108173	Not Available	1311	Open in IMG/M
3300027843\|Ga0209798_10014318	All Organisms → cellular organisms → Bacteria → Proteobacteria	4311	Open in IMG/M
3300027871\|Ga0209397_10011885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2411	Open in IMG/M
3300027871\|Ga0209397_10088074	All Organisms → cellular organisms → Bacteria → Proteobacteria	1272	Open in IMG/M
3300027871\|Ga0209397_10196741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	925	Open in IMG/M
3300027877\|Ga0209293_10568441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	598	Open in IMG/M
3300027885\|Ga0209450_10007282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5796	Open in IMG/M
3300027885\|Ga0209450_10072872	Not Available	2198	Open in IMG/M
3300027885\|Ga0209450_10418256	Not Available	978	Open in IMG/M
3300027885\|Ga0209450_10444812	Not Available	947	Open in IMG/M
3300027890\|Ga0209496_10137188	Not Available	1101	Open in IMG/M
3300027890\|Ga0209496_10274760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	834	Open in IMG/M
3300027897\|Ga0209254_10002768	All Organisms → cellular organisms → Bacteria → Proteobacteria	15989	Open in IMG/M
3300027897\|Ga0209254_10007369	All Organisms → cellular organisms → Bacteria → Proteobacteria	10162	Open in IMG/M
3300027897\|Ga0209254_10399355	All Organisms → cellular organisms → Bacteria → Proteobacteria	1020	Open in IMG/M
3300027900\|Ga0209253_10008309	All Organisms → cellular organisms → Bacteria → Proteobacteria	8938	Open in IMG/M
3300027900\|Ga0209253_10138300	Not Available	1978	Open in IMG/M
3300027900\|Ga0209253_10206378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1566	Open in IMG/M
3300027917\|Ga0209536_100061834	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatirhabdium → Desulfatirhabdium butyrativorans	4857	Open in IMG/M
3300027979\|Ga0209705_10317927	Not Available	789	Open in IMG/M
3300032356\|Ga0308414_1002398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	12226	Open in IMG/M
3300033413\|Ga0316603_10863100	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300033413\|Ga0316603_11037885	All Organisms → cellular organisms → Bacteria → Proteobacteria	775	Open in IMG/M
3300033414\|Ga0316619_10219858	Not Available	1385	Open in IMG/M
3300033416\|Ga0316622_100002268	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	13192	Open in IMG/M
3300033416\|Ga0316622_100191968	All Organisms → cellular organisms → Bacteria → Proteobacteria	2169	Open in IMG/M
3300033416\|Ga0316622_100675014	Not Available	1193	Open in IMG/M
3300033416\|Ga0316622_100724909	Not Available	1151	Open in IMG/M
3300033416\|Ga0316622_100960411	Not Available	997	Open in IMG/M
3300033416\|Ga0316622_101061968	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300033416\|Ga0316622_102540043	Not Available	590	Open in IMG/M
3300033418\|Ga0316625_100025942	Not Available	2457	Open in IMG/M
3300033418\|Ga0316625_101220153	Not Available	690	Open in IMG/M
3300033418\|Ga0316625_102704408	Not Available	506	Open in IMG/M
3300033419\|Ga0316601_101496394	Not Available	680	Open in IMG/M
3300033434\|Ga0316613_10846543	Not Available	628	Open in IMG/M
3300033480\|Ga0316620_10427425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1205	Open in IMG/M
3300033481\|Ga0316600_10165695	Not Available	1417	Open in IMG/M
3300033482\|Ga0316627_100511084	Not Available	1069	Open in IMG/M
3300033483\|Ga0316629_10126010	Not Available	1504	Open in IMG/M
3300033483\|Ga0316629_10159182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1381	Open in IMG/M
3300033485\|Ga0316626_10475627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1059	Open in IMG/M
3300033485\|Ga0316626_12099303	Not Available	512	Open in IMG/M
3300033486\|Ga0316624_10214023	Not Available	1502	Open in IMG/M
3300033488\|Ga0316621_10162480	Not Available	1351	Open in IMG/M
3300033488\|Ga0316621_10204314	Not Available	1234	Open in IMG/M
3300033488\|Ga0316621_10424444	Not Available	912	Open in IMG/M
3300033493\|Ga0316631_10325449	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300033521\|Ga0316616_101267856	Not Available	941	Open in IMG/M
3300033521\|Ga0316616_104496181	Not Available	525	Open in IMG/M
3300033521\|Ga0316616_104573108	Not Available	520	Open in IMG/M
3300033521\|Ga0316616_104704746	Not Available	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.15%
Engineered	Engineered	3.85%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	63.46%
Terrestrial	Environmental → Terrestrial	32.69%
Wastewater	Engineered → Wastewater	2.88%
Bioreactor	Engineered → Bioreactor	0.96%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	48.08%
Soil	Environmental → Terrestrial → Soil	30.77%
Sediment	Environmental → Aquatic → Sediment	8.65%
Marine	Environmental → Aquatic → Marine	5.77%
Activated Sludge	Engineered → Wastewater → Activated Sludge	2.88%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	1.92%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.96%
Unclassified	Engineered → Bioreactor → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	30.77%
Sediment	Environmental → Aquatic → Freshwater → Sediment	17.31%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.38%
Lentic	Environmental → Aquatic → Freshwater → Lentic	11.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.65%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.88%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	1.92%
Pond	Environmental → Aquatic → Freshwater → Pond	0.96%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.96%
Sediment	Environmental → Aquatic → Marine → Sediment	0.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.96%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	30.77%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	17.31%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	14.42%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	11.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.65%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.88%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.92%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.92%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.96%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.96%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.96%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.96%
Unclassified	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	29.81%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	13.46%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	11.54%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	10.58%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	7.69%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	3.85%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	3.85%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	2.88%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	2.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.92%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	1.92%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	1.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.96%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.96%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.96%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.96%
Hot Spring Phototrophic Mat	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Phototrophic Mat	0.96%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.96%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Down-Flow Hanging Sponge Reactor	Engineered → Bioreactor → Unclassified → Unclassified → Unclassified → Down-Flow Hanging Sponge Reactor	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003310	Down-flow hanging sponge reactor microbial communities from the University of Illinois at Urbana-Champaign, USA - L1-648F-DHS	Engineered	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300003910	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW	Environmental	Open in IMG/M
3300004048	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D2	Environmental	Open in IMG/M
3300004050	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009430	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring	Environmental	Open in IMG/M
3300009455	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300009873	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Wenshan plant	Engineered	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300010997	ECM15MPS05_Aassembled -- Sediment microbial communities from coastal marsh in Port Sulphur, LA sequencing method A (2X250bp)	Environmental	Open in IMG/M
3300014319	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1	Environmental	Open in IMG/M
3300022204	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_8_1	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025130	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027841	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300032356	Hot spring phototrophic mat microbial communities from Octopus Spring, Yellowstone National Park, Wyoming, United States - 20090730_OS50	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
D1draft_10194802	3300003310	Down-Flow Hanging Sponge Reactor	MATAFTCRSCGATDFEQVVVRMPSGMLRQTDLFCCRGCRTVYFDPKTFSAGRPAGLAAMAPDFTTYGR*
Ga0031656_100697172	3300003858	Freshwater Lake Sediment	CRSCGSIDFEQVIVRMPSGTLRQTDLFCCRGCRTVYFDPNTFSADRPAGLAAMTPDFKTYGT*
JGI26437J51864_100069122	3300003910	Freshwater Lake Sediment	MGKSFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPTTFHAGQPAGLAALTPNLKTYGT*
Ga0055494_100793922	3300004048	Natural And Restored Wetlands	TFTCRSCGSTDFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGQPAGLAALAPNLRTYGT*
Ga0055491_101176751	3300004050	Natural And Restored Wetlands	CRSCGSTDFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGQPAGLAALAPNLRTYGT*
Ga0062378_100038132	3300004780	Wetland Sediment	WTHSCIFIQCILTLLELSGYPLYFYSMPPRFTCPSCRSTEFEQVVVRLPSGMLRQTDFFCCRACRTVYFDPATFHAGQPAGSASMTPNFKTYGK*
Ga0074472_103702422	3300005833	Sediment (Intertidal)	MAGRFTCPTCRATRFEQIVVRLPSGGLRQTDLFCCCACRTVFYDPATFHAGQPAGSESRNPDFKTYGK*
Ga0079037_1002154362	3300006224	Freshwater Wetlands	MGATFTCRSCGSADFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPKTFHAGQPAGLAAMTPDFSTYGR*
Ga0079037_1003228041	3300006224	Freshwater Wetlands	MGATFTCRSCGSADFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGRPAGLAAMTPDFTT
Ga0079037_1017787942	3300006224	Freshwater Wetlands	MEAKFTCRSCGSTEFEQVVVRMPSGMLRQTDLFCCRGCRTVYFDPSTFSAGRPAGLAAMSPDFKTYGR*
Ga0079303_105463761	3300006930	Deep Subsurface	MTASFTCRCCGSTEFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR*
Ga0105106_100481762	3300009078	Freshwater Sediment	MATGFTCRSCGSTDFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPRTFSAGRPAGLASMTPDLTTYGR*
Ga0105099_108158451	3300009082	Freshwater Sediment	MATGFTCRSCGSTDFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPRTFSAGRPAG
Ga0102851_102405952	3300009091	Freshwater Wetlands	MGATFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPKTFHAGQPAGLAAMTPDFSTYGR*
Ga0102851_104346812	3300009091	Freshwater Wetlands	MTTSFTCRACGSTEFEQVVVRMPSGMLRQTDLFCCRVCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR*
Ga0102851_125132461	3300009091	Freshwater Wetlands	MTASFTCRCCGSTEFDQVVVRMPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPD
Ga0102851_126513992	3300009091	Freshwater Wetlands	MATDFTCRSCGATDFEQVVVTMPSGMLRQTDLFCCRACRTVYFDLSIFSAGRPACVASMRPDFKTYGR*
Ga0115027_101120261	3300009131	Wetland	MGATFTCRSCGATDFEQVVVTMPSGMLRQTDLFCCRACRTVYFDLSIFSAGRPACVASMRPDFKTYGR*
Ga0115027_101957012	3300009131	Wetland	MGATFTCRSCGSADFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGRPAGLAAMTPDFTTYGG*
Ga0115027_116098321	3300009131	Wetland	PHARRGGAAAVYLSSMTTSFTCRACGSTDFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR*
Ga0115027_117575532	3300009131	Wetland	MATGFTCRSCGSTDFEQVVVRLPSGMLRQTDFFCCRGCRTVYFDPATFSAGRPAGLAAMTPDFKTYGR*
Ga0113563_109220961	3300009167	Freshwater Wetlands	TDFEQVVVRMLSGMLRQTDLFCCRVCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR*
Ga0113563_116377461	3300009167	Freshwater Wetlands	MASSFTCRSCGATDFEQVVVTMPSGMLRQTDLFCCRACRTVYFEPSIFSAGRPACVASMRPDFKTYSG*
Ga0113563_117869942	3300009167	Freshwater Wetlands	MTTSFTCRACGSTDFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR*
Ga0115028_101039052	3300009179	Wetland	MGATFTCRSCGSADFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGRPAGLAAMTPDFTTYGR*
Ga0115028_107307252	3300009179	Wetland	AVYLSSMTTSFTCRACGSTDFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR*
Ga0115028_115143722	3300009179	Wetland	MSSSFTCRSCGATDFEQVVVTMPSGMLRQTDLFCCRACRTVYFDLSIFSAGRPACVASMRPDFKTYGR*
Ga0115028_117530171	3300009179	Wetland	MTASFTCRCCGSTEFEQVVVRVPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR*
Ga0114938_10990032	3300009430	Groundwater	MTTFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRSCRTVYFDPKTFSAGRPAGLAAMVPDFTTYGR*
Ga0114939_100092632	3300009455	Groundwater	MPSAFTCRSFGGTDFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFSAGRPAGLASMRPDFKTYGR*
Ga0118657_103467042	3300009506	Mangrove Sediment	MPAFTCPSCRSNEFEQVVVRMPSGALRQTDFFCCRRCRTVFFDPGTFHAGRPAGAASFTPNLKTYGN*
Ga0118657_111903462	3300009506	Mangrove Sediment	MTTGFACKACGSTEFEQVVVRLPSGMLRQTDLFCCKDCRTVYFDPATFHAGRPAGLAAMAPDFTTYGR*
Ga0123573_100146987	3300009509	Mangrove Sediment	MQATFSCRSCGSTEFEQVVVRLPSGMLRQTDLFCCRGCRTVYFDPETFSAGRPAGLASMTPDLSTYGR*
Ga0123573_101141473	3300009509	Mangrove Sediment	MGEIFSCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRACRTVFFDPKTFHAGQPAGLAALAPNLKTYGT*
Ga0123573_101157451	3300009509	Mangrove Sediment	MTTGFACRACGSTEFEQVVVRLPSGMLRQTDLFCCKDCRTVYFDPATFHAGRPAGLAAMAPDFTTYGR*
Ga0123573_101344332	3300009509	Mangrove Sediment	MTTGFACKACGSTEFEQVVVRLPSGMLRQTDLFCCKGCRTVYFEPATFHAGRPAGLAAMAPDFKTYGR*
Ga0123573_102624902	3300009509	Mangrove Sediment	MPAFTCPSCCSNEFEQVVVRMPSGALRQTDFFCCRRCRTVFFDPGTFHAGRPAGAASFTPNLKTYGN*
Ga0123573_115503032	3300009509	Mangrove Sediment	MAQRFTCRSCGGTDFEQVVVRLPSGMLRQTDLFCCRGCRTVYFDPDTYHAGRPAGMAAMAPDLKTYGGR*
Ga0130016_1000530113	3300009868	Wastewater	MSATFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRSCRTVYFDPKTFHAGQPAGLAAMTPDFTTYGR*
Ga0131077_1000335531	3300009873	Wastewater	MASGFTCRSCGAAEFEQVVVRMPSGMLRQTDLFCCRSCRTVYFDPKTFSAGRPAGLASMTPDLTTYGR*
Ga0131077_115005751	3300009873	Wastewater	MSKDFSCRSCGATDFEQVVVRLPSGMLRQTDLFCCRGCRTVFFDPKTFHAGQPAGLAAFTPDMK
Ga0136852_100497934	3300010412	Mangrove Sediment	MTTGFACKACGSTEFEQVVVRLPSGMLRQTDLFCCKGCRTVYFDPSTFHAGRPAGLAAMAPDFKTYGR*
Ga0136852_102131742	3300010412	Mangrove Sediment	MRAFTCPSCRSNEFEQVVVRMPSGALRQTDFFCCRRCRTVFFDPGTFHAGRPAGSASFTPNLKTYGN*
Ga0139324_10056852	3300010997	Sediment	MQATFSCRSCGSTEFEQVVVRLPSGMLRQTDLFCCRGCRTVYFDPETFSAGRPAGLASMKPDLSTYGR*
Ga0075348_10759172	3300014319	Natural And Restored Wetlands	MGTGFTCKSCGSTEFEQVVVRVPSGMLRQTDLFCCKGCRTVYFDPATFHAGRPAGLAAMAPDFKTYGR*
Ga0224496_103607082	3300022204	Sediment	MPSRFTCPTCRSTEFEQVVVTLPGGALRQTDLFCCRTCRTVYFDPATFHAGRPAGSASLTPNLKTYGK
Ga0124853_14793555	3300024056	Freshwater Wetlands	SCGSTEFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDLKTTAADGLA
Ga0209594_10143152	3300025130	Groundwater	MPSAFTCRSFGGTDFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFSAGRPAGLASMRPDFKTYGR
Ga0209392_10075823	3300027683	Freshwater Sediment	MATGFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRGCRTVYFDPASFNAGRPAGPAAMTPDFRTYGR
Ga0208665_100917242	3300027715	Deep Subsurface	TSFTCRCCGSTEFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR
Ga0209682_100035974	3300027716	Wetland Sediment	MPPRFTCPSCRSTEFEQVVVRLPSGMLRQTDFFCCRACRTVYFDPATFHAGQPAGSASMTPNFKTYGK
Ga0209797_100465432	3300027831	Wetland Sediment	RHWTHSCIFIQCILTLLELSGYPLYFYSMPPRFTCPSCRSTEFEQVVVRLPSGMLRQTDFFCCRACRTVYFDPATFHAGQPAGSASMTPNFKTYGK
Ga0209262_101081732	3300027841	Freshwater	MGATFTCQSCGSTDFEQVVVRLPGGMLRQTDLFCCRACRTVYFDPKTFHAGHPAGQTAMAPDLKTYGI
Ga0209798_100143181	3300027843	Wetland Sediment	YFYSMPPRFTCPSCRSTEFEQVVVRLPSGMLRQTDFFCCRACRTVYFDPATFHAGQPAGSASMTPNFKTYGK
Ga0209397_100118852	3300027871	Wetland	MTASFTCRCCGSTEFEQVVVRVPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR
Ga0209397_100880742	3300027871	Wetland	MGATFTCRSCGSTDFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGQPAGLAAMTPDFSTYGR
Ga0209397_101967412	3300027871	Wetland	MTTSFTCRACGSTDFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR
Ga0209293_105684412	3300027877	Wetland	MTASFTCRCCGSTEFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTY
Ga0209450_100072826	3300027885	Freshwater Lake Sediment	MGKSFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPTTFHAGQPAGLAALTPNLKTYGT
Ga0209450_100728721	3300027885	Freshwater Lake Sediment	MATGFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRGCRTVYFDPASFSSGRPAGQAAMTPDFRT
Ga0209450_104182562	3300027885	Freshwater Lake Sediment	MGATFTCQSCGSTDFEQVVVRLPGGMLRQTDLFCCRGCRTVYFDPKTFHAGHPAGQTAMAPDLKTYGI
Ga0209450_104448122	3300027885	Freshwater Lake Sediment	RSCGSTGFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPATFHAGQPAGLSALTPNFKTYG
Ga0209496_101371882	3300027890	Wetland	MTASFTCRCCGSTEFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR
Ga0209496_102747602	3300027890	Wetland	MGATFTCRSCGSADFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGRPAGLAAMTPDFTTYGR
Ga0209254_100027688	3300027897	Freshwater Lake Sediment	MASKFTCRSCGSIDFEQVIVRMPSGTLRQTDLFCCRGCRTVYFDPNTFSADRPAGLAAMTPDFKTYGT
Ga0209254_100073693	3300027897	Freshwater Lake Sediment	MAGTFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPATFHAGQPAGLAALTPNLKTYGT
Ga0209254_103993552	3300027897	Freshwater Lake Sediment	MTTSFTCRACGSTDFEQVVVRMPSGMLRQTDLFCCRVCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR
Ga0209253_100083092	3300027900	Freshwater Lake Sediment	MGKTFICRSCGSTGFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPATFHAGQPAGLSALTPNFKTYGT
Ga0209253_101383002	3300027900	Freshwater Lake Sediment	MATDFTCRSCGATEFEQVVVRMPSGMLRQTDLFCCRSCRTVYFEPSIFSAGRPACVASMRPDFKTYGR
Ga0209253_102063782	3300027900	Freshwater Lake Sediment	MPTSFTCRSCGSTDFEQVVVRLPSGMLRQTDLFCCRGCRTVYFDPATFSAGRPAGLAAMTPDFKTYGR
Ga0209536_1000618345	3300027917	Marine Sediment	MGTGFACRSCGSTEFEQVVVRMPSGMLRQTDLFCCKGCRTVYFDPATFHAGRPAGLAAMAPDFKTYGR
Ga0209705_103179271	3300027979	Freshwater Sediment	RSCGSTDFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPRTFSAGRPAGLASMTPDLTTYG
Ga0308414_10023983	3300032356	Hot Spring Phototrophic Mat	MAASFTCRACGGSDFEQVVVRLPSGMLRQTDFFCCRGCRTVYFDPQTFSAGRPAGVAAMRPDLKTYGGR
Ga0316603_108631002	3300033413	Soil	MGATFTCRSCGSADFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPKTFHAGQPAGLAAMTPDFSTYGR
Ga0316603_110378852	3300033413	Soil	MSSSFTCRSCGATDFEQVVVTMPSGMLRQTDLFCCRSCRTVYFEPSIFSAGRPACVASMRPDFKTYSG
Ga0316619_102198581	3300033414	Soil	MTTSFTCRACGSTEFEQVVVRMPSGMLRQTDLFCCRVCRTVFFDPGTFSAGRPAGLAAMAPDFKT
Ga0316622_10000226812	3300033416	Soil	MAKSFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPATFHAGQPAGLAALTPNLKTYGT
Ga0316622_1001919682	3300033416	Soil	MGATFTCRSCGSADFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFPAGRPAGLAAMTPDFSTYGR
Ga0316622_1006750141	3300033416	Soil	GRPRRPGRRRIGAPSAVYSSSMTASFTCRCCGSTEFEQVVVRVPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR
Ga0316622_1007249092	3300033416	Soil	HAHRGGAAVYLSSMTTSFTCRACGSTDFEQVVVRMPSGMLRQTDLFCCRVCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR
Ga0316622_1009604112	3300033416	Soil	MATDFTCRSCGATDFEQVVVTMPSGMLRQTDLFCCRACRTVYFDLSIFSAGRPACVASMRPDFKTYGR
Ga0316622_1010619682	3300033416	Soil	MEAKFTCRSCGSTEFEQVVVRMPSGMLRQTDLFCCRGCRTVYFDPSTFSAGRPAGLAAMSPDFKTYGR
Ga0316622_1025400431	3300033416	Soil	MGATFTCRSCGSTEFEQVVVRLPSGMLRQTDLFCCRACRTVYFEPKTFHAGRPAGLAAMTPDFTTYGR
Ga0316625_1000259423	3300033418	Soil	MTTSFTCRACGSTEFEQVVVRMPSGMLRQTDLFCCRVCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR
Ga0316625_1012201532	3300033418	Soil	SSSMGATFTCRSCGSADFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGRPAGLAAMTPDFTTYGR
Ga0316625_1027044082	3300033418	Soil	ELELTRYHLYSSSMATSFTCRSCGSTEFEQVVVRLPSGMLRQTDLFCCRSCRTVYFDPSTYHAGRPAGVAAMAPNLKTYGGR
Ga0316601_1014963942	3300033419	Soil	RAARRAVYSSSMGATFTCRSCGSADFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPKTFHAGQPAGLAAMTPDFSTYGR
Ga0316613_108465431	3300033434	Soil	DRRRGRPRRPGRRRIGAPSAVYSSSMTASFTCRCCGSTEFEQVVVRVPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR
Ga0316620_104274252	3300033480	Soil	MSASFTCRCCGSTEFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR
Ga0316600_101656952	3300033481	Soil	VYSSSMTASFTCRCCGSTEFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR
Ga0316627_1005110842	3300033482	Soil	AHHAVYSSSMGATFTCRSCGSADFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGRPAGLAAMTPDFTTYGR
Ga0316629_101260101	3300033483	Soil	RRPGAVYSSSMTTSFTCRCCGSTEFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR
Ga0316629_101591822	3300033483	Soil	MGATFTCRSCGSADFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGQPAGQAAMTPDFTTYGR
Ga0316626_104756272	3300033485	Soil	MATDFTCRSCGATDFEQVVVKMPSGMLRQTDLFCCRACRTVYFEPSIFSAGRPACVASMRPDFKTYSR
Ga0316626_120993031	3300033485	Soil	ARRAVYSSSMGATFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPKTFHAGRPAGLAAMTPDFTTYGR
Ga0316624_102140231	3300033486	Soil	GRPRRPGRRRIGALSAVYSSSMTASFTCRCCGSTEFEQVVVRVPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR
Ga0316621_101624802	3300033488	Soil	MTTDFTCRSCGASDFEQVVVTMPSGMLRQTDLFCCRSCRTVYFEPSIFSAGRPACVASMRPDFKTYSG
Ga0316621_102043141	3300033488	Soil	MTTSFTCRACGSTDLEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR
Ga0316621_104244441	3300033488	Soil	MTTDFTCRSCGATDFEQVVVTMPSGMLRQTDLFCCRACRTVYFDLSIFSAGRPACVASMRPDFKTYGR
Ga0316631_103254492	3300033493	Soil	MGATFTCRSCGSTDFEQVVVRMPSGMLRQTDLFCCRACRTVYFDPKTFHAGRPAGLAAMTPDFTTYGR
Ga0316616_1012678561	3300033521	Soil	PVVTRAARRAVYSSSMGATFTCRSCGSADFEQVVVRLPSGMLRQTDLFCCRACRTVYFDPKTFHAGRPAGLAAMTPDFTTYGR
Ga0316616_1044961812	3300033521	Soil	RTRSSGTCRAVYSSSMATSFTCRSCGSTEFEQVVVRLPSGMLRQTDLFCCRSCRTVYFDPSTYHAGRPAGVAAMAPNLKTYGGR
Ga0316616_1045731081	3300033521	Soil	HARRGGAAAVYLSSMTTSFTCRACGSTDFEQVVVRMPSGMLRQTDLFCCRGCRTVFFDPGTFSAGRPAGLAAMAPDFKTYGR
Ga0316616_1047047462	3300033521	Soil	RASVHRRPGAVYSSSMTASFTCRCCGSTEFEQVVVRVPSGMLRQTDLFCCRGCRTVFFDPKTFSAGRPAGLASMTPDFKTYGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097613

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences