Metagenome Family F097604

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097604
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	170 residues
Representative Sequence	MPQELQIIRASEFIRFGAQGHFDLAASKAALAELAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTREERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGQETEPGHRRSPGEKQVPVRFPKREARPARRSAHSRAKK
Number of Associated Samples	75
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	27.27 %
% of genes near scaffold ends (potentially truncated)	39.42 %
% of genes from short scaffolds (< 2000 bps)	71.15 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.577 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (24.038 % of family members)
Environment Ontology (ENVO)	Unclassified (29.808 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (44.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.17% β-sheet: 11.46% Coil/Unstructured: 59.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF06742	DUF1214	3.85
PF14366	DUF4410	2.88
PF00999	Na_H_Exchanger	2.88
PF00924	MS_channel	2.88
PF13633	Obsolete Pfam Family	1.92
PF06863	DUF1254	1.92
PF04366	Ysc84	1.92
PF00884	Sulfatase	1.92
PF07885	Ion_trans_2	0.96
PF02245	Pur_DNA_glyco	0.96
PF12710	HAD	0.96
PF13366	PDDEXK_3	0.96
PF12697	Abhydrolase_6	0.96
PF04955	HupE_UreJ	0.96
PF00916	Sulfate_transp	0.96
PF00158	Sigma54_activat	0.96
PF11964	SpoIIAA-like	0.96
PF02954	HTH_8	0.96
PF04966	OprB	0.96
PF13387	DUF4105	0.96
PF03781	FGE-sulfatase	0.96
PF06130	PTAC	0.96
PF01152	Bac_globin	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	5.77
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	3.85
COG0475	Kef-type K+ transport system, membrane component KefB	Inorganic ion transport and metabolism [P]	2.88
COG4651	Predicted Kef-type K+ transport protein, K+/H+ antiporter domain	Inorganic ion transport and metabolism [P]	2.88
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	2.88
COG3263	NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domains	Energy production and conversion [C]	2.88
COG3004	Na+/H+ antiporter NhaA	Energy production and conversion [C]	2.88
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	2.88
COG0025	NhaP-type Na+/H+ or K+/H+ antiporter	Inorganic ion transport and metabolism [P]	2.88
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	1.92
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	0.96
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.96
COG2370	Hydrogenase/urease accessory protein HupE	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	0.96
COG2094	3-methyladenine DNA glycosylase Mpg	Replication, recombination and repair [L]	0.96
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG3659	Carbohydrate-selective porin OprB	Cell wall/membrane/envelope biogenesis [M]	0.96
COG4869	Propanediol utilization protein	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.96
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	0.96

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.58 %
Unclassified	root	N/A	14.42 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	68.27 %
Unclassified	root	N/A	14.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	66.35 %
Unclassified	root	N/A	14.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.92 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	63.46 %
Unclassified	root	N/A	14.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Candidatus Brocadiia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia	1.92 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	63.46 %
Unclassified	root	N/A	14.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Candidatus Brocadiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales	1.92 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	63.46 %
Unclassified	root	N/A	14.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Candidatus Brocadiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae	1.92 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	63.46 %
Unclassified	root	N/A	14.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Candidatus Jettenia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia	0.96 %
Candidatus Brocadia	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia	0.96 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	63.46 %
Unclassified	root	N/A	14.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.88 %
Candidatus Brocadia fulgida	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia fulgida	0.96 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	0.96 %
Candidatus Jettenia ecosi	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia → Candidatus Jettenia ecosi	0.96 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101848914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	637	Open in IMG/M
3300001213\|JGIcombinedJ13530_103159231	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1231	Open in IMG/M
3300001213\|JGIcombinedJ13530_108174107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	726	Open in IMG/M
3300001213\|JGIcombinedJ13530_109112199	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	796	Open in IMG/M
3300003852\|Ga0031655_10232640	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	695	Open in IMG/M
3300004025\|Ga0055433_10079604	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300005332\|Ga0066388_101449002	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1197	Open in IMG/M
3300005440\|Ga0070705_100379942	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1039	Open in IMG/M
3300005546\|Ga0070696_100642480	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	859	Open in IMG/M
3300005829\|Ga0074479_10007285	All Organisms → cellular organisms → Bacteria → Proteobacteria	5408	Open in IMG/M
3300005829\|Ga0074479_10690897	Not Available	779	Open in IMG/M
3300005831\|Ga0074471_10710218	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2642	Open in IMG/M
3300005831\|Ga0074471_10953025	Not Available	630	Open in IMG/M
3300005836\|Ga0074470_10140779	All Organisms → cellular organisms → Bacteria	3077	Open in IMG/M
3300005836\|Ga0074470_11466863	All Organisms → cellular organisms → Bacteria → Proteobacteria	4890	Open in IMG/M
3300005836\|Ga0074470_11651398	Not Available	772	Open in IMG/M
3300005937\|Ga0081455_10080540	All Organisms → cellular organisms → Bacteria	2669	Open in IMG/M
3300006092\|Ga0082021_1125610	All Organisms → cellular organisms → Bacteria	5901	Open in IMG/M
3300006224\|Ga0079037_101697260	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	631	Open in IMG/M
3300009167\|Ga0113563_13992517	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	500	Open in IMG/M
3300009175\|Ga0073936_10075942	All Organisms → cellular organisms → Bacteria → Proteobacteria	2892	Open in IMG/M
3300009506\|Ga0118657_10048421	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	10741	Open in IMG/M
3300009506\|Ga0118657_10798357	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1177	Open in IMG/M
3300009527\|Ga0114942_1158184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	794	Open in IMG/M
3300009678\|Ga0105252_10075504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1317	Open in IMG/M
3300009870\|Ga0131092_10008467	All Organisms → cellular organisms → Bacteria	18676	Open in IMG/M
3300009870\|Ga0131092_10065170	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	4659	Open in IMG/M
3300009870\|Ga0131092_10510687	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1077	Open in IMG/M
3300010341\|Ga0074045_10182898	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Brocadia → Candidatus Brocadia fulgida	1411	Open in IMG/M
3300010361\|Ga0126378_11226741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	847	Open in IMG/M
3300010413\|Ga0136851_10282650	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1689	Open in IMG/M
3300011432\|Ga0137428_1048897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1116	Open in IMG/M
3300011441\|Ga0137452_1131817	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	836	Open in IMG/M
(restricted) 3300013136\|Ga0172370_10458210	Not Available	685	Open in IMG/M
3300013315\|Ga0173609_11007053	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2283	Open in IMG/M
3300014306\|Ga0075346_1042219	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	882	Open in IMG/M
3300014502\|Ga0182021_12691774	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	598	Open in IMG/M
3300016270\|Ga0182036_10333014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1165	Open in IMG/M
3300017931\|Ga0187877_1029673	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2751	Open in IMG/M
3300017940\|Ga0187853_10180160	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	998	Open in IMG/M
3300017974\|Ga0187777_10770676	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	686	Open in IMG/M
3300018013\|Ga0187873_1177943	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300018020\|Ga0187861_10447177	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	537	Open in IMG/M
3300018060\|Ga0187765_10129816	All Organisms → cellular organisms → Bacteria	1403	Open in IMG/M
3300021071\|Ga0194058_10050360	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1423	Open in IMG/M
3300021074\|Ga0194044_10152066	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	916	Open in IMG/M
3300021520\|Ga0194053_10328937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	587	Open in IMG/M
3300022555\|Ga0212088_10012416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13013	Open in IMG/M
3300027896\|Ga0209777_10006259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	13435	Open in IMG/M
3300027902\|Ga0209048_10966345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	546	Open in IMG/M
3300030002\|Ga0311350_11800134	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
3300031232\|Ga0302323_102059272	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300031691\|Ga0316579_10329886	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300031727\|Ga0316576_10559750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	837	Open in IMG/M
3300031834\|Ga0315290_11003711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	703	Open in IMG/M
3300031834\|Ga0315290_11412921	Not Available	569	Open in IMG/M
3300031902\|Ga0302322_103216269	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	561	Open in IMG/M
3300031912\|Ga0306921_10243659	All Organisms → cellular organisms → Bacteria	2106	Open in IMG/M
3300031947\|Ga0310909_10400047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1153	Open in IMG/M
3300031997\|Ga0315278_10699582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1031	Open in IMG/M
3300031997\|Ga0315278_11253905	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300032133\|Ga0316583_10237005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300032137\|Ga0316585_10174090	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	711	Open in IMG/M
3300032157\|Ga0315912_10477611	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	990	Open in IMG/M
3300032164\|Ga0315283_10184542	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2241	Open in IMG/M
3300032173\|Ga0315268_11207330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	766	Open in IMG/M
3300032256\|Ga0315271_10013107	All Organisms → cellular organisms → Bacteria	5529	Open in IMG/M
3300032256\|Ga0315271_10014690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	5249	Open in IMG/M
3300032256\|Ga0315271_10088133	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300032256\|Ga0315271_10166220	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1742	Open in IMG/M
3300032261\|Ga0306920_100165362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3298	Open in IMG/M
3300032275\|Ga0315270_10045008	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2465	Open in IMG/M
3300032275\|Ga0315270_10188432	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1260	Open in IMG/M
3300032401\|Ga0315275_10243492	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2008	Open in IMG/M
3300032770\|Ga0335085_10004813	All Organisms → cellular organisms → Bacteria	22093	Open in IMG/M
3300032782\|Ga0335082_10271148	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1575	Open in IMG/M
3300032782\|Ga0335082_10764581	Not Available	828	Open in IMG/M
3300032782\|Ga0335082_11575938	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300032783\|Ga0335079_11232957	Not Available	750	Open in IMG/M
3300032783\|Ga0335079_11943792	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M
3300032805\|Ga0335078_11321871	Not Available	821	Open in IMG/M
3300032805\|Ga0335078_11608929	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300032828\|Ga0335080_11101470	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300032829\|Ga0335070_10210446	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M
3300032892\|Ga0335081_12614595	Not Available	518	Open in IMG/M
3300032893\|Ga0335069_10105141	All Organisms → cellular organisms → Bacteria	3559	Open in IMG/M
3300032893\|Ga0335069_10307186	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Candidatus Brocadiia → Candidatus Brocadiales → Candidatus Brocadiaceae → Candidatus Jettenia → Candidatus Jettenia ecosi	1886	Open in IMG/M
3300032893\|Ga0335069_11017572	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	919	Open in IMG/M
3300032897\|Ga0335071_10140981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2363	Open in IMG/M
3300032897\|Ga0335071_11465374	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	627	Open in IMG/M
3300033158\|Ga0335077_11810164	Not Available	573	Open in IMG/M
3300033418\|Ga0316625_101379141	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	659	Open in IMG/M
3300033483\|Ga0316629_11349928	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	576	Open in IMG/M
3300033485\|Ga0316626_12109176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300033521\|Ga0316616_101259142	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	944	Open in IMG/M
3300033521\|Ga0316616_101952088	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	776	Open in IMG/M
3300033521\|Ga0316616_103012868	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	635	Open in IMG/M
3300033557\|Ga0316617_101083129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	789	Open in IMG/M
3300033557\|Ga0316617_102209636	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	568	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.38%
Host-Associated	Host-Associated	4.81%
Engineered	Engineered	4.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	48.08%
Terrestrial	Environmental → Terrestrial	42.31%
Plants	Host-Associated → Plants	4.81%
Wastewater	Engineered → Wastewater	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.42%
Freshwater	Environmental → Aquatic → Freshwater	28.85%
Sediment	Environmental → Aquatic → Sediment	10.58%
Marine	Environmental → Aquatic → Marine	8.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.85%
Activated Sludge	Engineered → Wastewater → Activated Sludge	3.85%
Peat	Environmental → Terrestrial → Peat	2.88%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.96%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.96%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	30.77%
Lake	Environmental → Aquatic → Freshwater → Lake	18.27%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.58%
Wetlands	Environmental → Aquatic → Marine → Wetlands	8.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.73%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	5.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.85%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	3.85%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.88%
Loam	Environmental → Terrestrial → Soil → Loam	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.88%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	29.81%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	12.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.58%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	7.69%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	5.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.85%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	3.85%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	1.92%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.96%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	24.04%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	12.50%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	6.73%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	4.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.85%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.88%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	2.88%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	2.88%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	2.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.88%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.88%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.88%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	2.88%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.96%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.96%
Wastewater Treatment Plant	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater Treatment Plant	0.96%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004025	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006092	Activated sludge microbial communities from wastewater treatment plant in Ulu Pandan, Singapore	Engineered	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009870	Activated sludge microbial diversity in wastewater treatment plant from Taiwan - Linkou plant	Engineered	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300011441	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2	Environmental	Open in IMG/M
3300013136 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_11.5m	Environmental	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300014306	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1	Environmental	Open in IMG/M
3300014319	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1	Environmental	Open in IMG/M
3300014324	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018020	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_100	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021071	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-17m	Environmental	Open in IMG/M
3300021074	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L442-17m	Environmental	Open in IMG/M
3300021520	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L227-8m	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031691	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA	Host-Associated	Open in IMG/M
3300031727	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5	Host-Associated	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032133	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA	Host-Associated	Open in IMG/M
3300032137	Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC	Host-Associated	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1018489141	3300001213	Wetland	HGQFDLAASKVALAELAGVCRKRGIDQAMMDLRALRPGPKPVFSPADLAELVDTFRKVGFTRQERLAILYHSDPHHRARLFAFLSAMHGWAVRAFGDFEEALLWLSSGQEIEPAPRRSAAEKPVPVRFAKRTARRSQRPAKK*
JGIcombinedJ13530_1031592312	3300001213	Wetland	MPLELQIIRASEFVRLGAHGHFDLAASKAALAVLVGACRKRGINQALMDLRQLRPGPKPVYSRADLIELVNTFREIGFTQNQRLAILYHSDPHHRARLFAFLSKLHGWTVQAFGDFEEALRWLSSGEETIAQPVRSATGKKIRARASRKEEKPETLPLILPGRRQKPVPAIRSAGSPPVRPADPGRQRREA*
JGIcombinedJ13530_1053865431	3300001213	Wetland	MRLELIRANDFIKLTAEGLFDLAASKAALATVAAACRKRGINHAIIDLRALHPGPKPVFSSADLLVLVNTFPEVGFKQRLFKLAILYTLDPHKRARLFAFLSTLHGWKVQAFSDFEEALLWLSGGAEPEAEAADAEPVPVQRQSHGTQLRVEGLPASKGPR
JGIcombinedJ13530_1081741072	3300001213	Wetland	MPLELQIIRAHEFIQMGAHGHFDLAASKEALAGIARACRKRNIDQALMDLRALRPGPKPVFSPADLAELVNSFREIGFTPRQRLAILYQSDPHHRARLFAILSAQHGWTVQAFSDFEKALLWLSQAPEPAPRRERSPGEKLIPLRIAKSGSTPMPPVPASRGKKVVPRKALAKTRAGRAA
JGIcombinedJ13530_1091121992	3300001213	Wetland	MPQELQIIRASEFIRFGAHGHFDLAASKAALAEMAGMCRKRGIAQAMLDLRALHPGPKPVFSPADLAELVGTFREVGFTHQERLAILYLSDPHRRARLFAFLSAMHGWHVRAFVDFEEALLWLSSGQEPGPSRQRSPGEKQVPVQFSKRKPKPARQPAQSRSR*
Ga0031655_102326401	3300003852	Freshwater Lake Sediment	MPQELQIIRASEFIRFGAQGHFDLAASKAALAELAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTREERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGQETEPGHRRSPGEKQVPVRFPKREARPARRSAHSRAKK*
Ga0055433_100796041	3300004025	Natural And Restored Wetlands	QLRRLGSRGWELGEWFYFPFSRNLTTVPNMPLELQIIRASEFIRLGARGHFDLAASKAALAEMAAACRKRGLNQALLDLRALQPGPKPVFSPADLIELVNTFREVGFTHEQKLAILYHSDPYHRARLFAFLSIVRGWSVQAFGDFEQAILWLSGEAAAPVRDIRSASEKKIPVRALKREVNPPARPRRAKTVKPRSPSGPK*
Ga0066388_1014490022	3300005332	Tropical Forest Soil	MSLELHIIRASEFIRVGAQGHFDLASSKAALAELALACRKRGIDHAMMDLRALHPGPKPVFSPADLAELVSTFPAAGFTHQQRLAILYSSDPHRRARLFAFLSTMHGWSVKAFGDFEAALVWLSAGEDQPVETKASRGSKQIPVRFTRKEAPSRKPGKPGKRKPVR
Ga0070705_1003799422	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPQEIQIIRASEFVRLGAHGYFDLASSKAALAELVSACRKRGIDQAMMDLRALQPGPKPVFTPADLAELVRTFPEAGFTQRQKLAILYRSDPHRRARLFAFLSTMHGWAVRAFGDFEAALHWLSEVHEPGLKRAPAAEGKQVPVRFANKATDRTTQRRKRRK*
Ga0070696_1006424801	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPQEIQIIRASEFVRLGAHGYFDLASSKAALAELVSACRKRGIDQAMMDLRALQPGPKPVFTPADLAELVRTFPEAGFTQRQKLAILYRSDPHRRARLFAFLSTMHGWAVRAFGDFEAALHWLSEVHEPGLKRAPAAEGKQVPV
Ga0074479_100072855	3300005829	Sediment (Intertidal)	MPLELQIIRASEFIRLGAHGHFDLAASKAALAELAAACHKRGVNQALMDLRALRPGPKPVFSPSDLRELVNTFREIGFTHQQRLAILYQTDPYHRARLFAFLSNLRGWTVQAFSDFEKAIMWLSRGKETAARAVGSAVAKQIPVRHLKPEPSPPRRAIVTVGRKSRAVKSAARPN*
Ga0074479_106908972	3300005829	Sediment (Intertidal)	MPLELQIIRASEFIRLGAHGHFDLAASKAALAEMAGACRKRGIHQALMDLRALHPGPKPVFSPADLIALVNTFREIGFTHQQRLAILYHSDPFHRARLFAFLSTLRGWTVQAFGSFEEALLWLSSRQETAARLSRSHAGKTIPVRDLKQKAKPPAPPVCLPGRQARESSGRKRVVSAMHRAGRLR*
Ga0074471_107102182	3300005831	Sediment (Intertidal)	MRNNPLKTDSAARTAITPTLNMPLELQIIRASEFVKLGAHGHFDLAASKVALAELATACHKRGINQALLDLRALHPGPKPVFTPADLLELVSTFREIGFTHELRLAILYQSDPHHRARLFAFISTLRGWTVQAFSDFEKAIMWLSQGNETPAGDVRSPRGKQIPVRTLKRETKLPAPAKSIRSVRSRSISATARTHRRTL*
Ga0074471_109530251	3300005831	Sediment (Intertidal)	LIMSMELQIIRASEFVRLGAHGHFDLAASKTALAEMAAACRKRGINQALMDLRALHPGAKPVFSPTDLIELVDTFREVGFTHQERLAILYHSDPHHRARLFAFLSIVRGWSVQAFSDYEQAILWLSRSDEAPVVAAGSSAGRRIPVRDLKREAKLPARPRTAKPTSSR*
Ga0074470_101407792	3300005836	Sediment (Intertidal)	MPLELQIIRATDFIRLGAQGHFDLAASKAALTQLAAACRKRAIHQALLDLRELRPGPKPVFTPADLLELVNTFREAGFTHDQRLAILYHSDPHRRARLFAFLSNLRGWTVQAFGDFEKAILWLSSGTATPAGAAARSPSEKQIPVRNLKREPKLPPHPRMTGSTKSRSVSSARLGN*
Ga0074470_114668632	3300005836	Sediment (Intertidal)	MPLELQIIRASEFIRLGARGHFDLAASKAALAEMAAACRKRGLNQALLDLRALQPGPKPVFSPADLIELVNTFREVGFTHEQKLAILYHSDPYHRARLFAFLSIVRGWNVQAFGEFEQAILWLSGAEATPPGDIRSVSGKRIPVRELRREANPPARPSRLKTGKSRPTSEPK*
Ga0074470_116513982	3300005836	Sediment (Intertidal)	MPLELQIIRASEFVRLGAHGHFDLAASKAALGQLAGACRKRGINQALMDLRALHAGPKPVFSPADLVELVKTFHEVGFTHQLRLAILYRSDPYKRARLFAFLSNLHGWSVQAFSDFEKAIFWLSHEQETSADAVRPPSGKPIPVRQSKRAATRPARPMTTRTIKFRSPLPARQTN*
Ga0081455_100805402	3300005937	Tabebuia Heterophylla Rhizosphere	MPLELHIIRAHEFIQLGAHGHFDLAASKATLATLARACRKRNINQALLDLRALHPGPKPVFSPADLAELVGTFREIGFTHRQRLAILYHSDPHHRARLFAFLSTMHGWHVKAFGDFEESFLWLSAGNESEPKRQRSPSEKNIPLRASKSDAANHPVHVGKKTESPIRRTHARARAARAA*
Ga0082021_11256103	3300006092	Wastewater Treatment Plant	MPLELHIIRAHEFIQMGAHGRFDLAASKQALAQLVRACRRRNINQALMDLRSLHPGQKPKFSRAELAELVGTFREAGFTHRQRLAVLYHSDPHHRARLFAFLSTMHGWHVQAFGDFEEAFLWLSGNPPAEPRRTRSHGEKLITVRAANPGKESSIPVPTARRPEAAGRKVPPRPRAARAARVG*
Ga0079037_1016972602	3300006224	Freshwater Wetlands	AVARTPMPQELQIIRASEFIRFGAQGHFDLPASKAALAELAAVCRKRGIAHAMLDLRALHPGPKPVFSPADLAELVGTFHEVGFTRQERLAILYGSDPHHRARLFAFLSTMHGYTVRAFGDFEEALLWLASGEGPSPARRRSPGEKQVPVRFAQRASKAAKRPAPSRSRP*
Ga0113563_132926501	3300009167	Freshwater Wetlands	GAQGHFDLAASKAALAELAAACRKRGIDHAMMDLRALHPGPKPVFSPADLAELVNTFREIGFTPQQRLAILYQSDPHRRARLFAFLSIMHGWAVRAFGEFDEALLWLSGSQEPGRPRTPAPGEKRVPVR*
Ga0113563_139925171	3300009167	Freshwater Wetlands	MPQELQIIRASEFIRMGAQGHFDLAASKAALAELAAACRKRGICQAMMDLRALHFGPKPVFSPADLAELVGTFREIGFTPQQRLAILYKSDPYHRARLFAFLSSMHGWSVRAFDDFEKALHWLSQGEQPKAKRKLMPGEKEVTVRLPE
Ga0073936_100759422	3300009175	Freshwater Lake Hypolimnion	MPQELQIIRASEFIRFSAQGHFDLAASKTALAELAGVCRKRGIPHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTREDRLAVLYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGQETEPGHRRTPGEKSVPVRFPKREARSARRSAHLRAKK*
Ga0118657_100484215	3300009506	Mangrove Sediment	MPQELQIIRASEFIRYNAQGYFDLVASKAALAELAAVCRKRGIHQAMLDLRALRPGPKPVFSPADLAELVGTFREVGFTHREHLAILYHSDPHRRARLFAFLSTMHGWNVRAFGDFEKALLWLSSGEETEPRRRASSKAKSVPVRFPQPNGKAAGRPARPGQKHY*
Ga0118657_107983572	3300009506	Mangrove Sediment	MPQELQIIRASEFIRFNARGYFDLAASKVALAEVARACRKRGIAQAMMDLRALQPGPKPVFSPADLAELVNTFRQIGFTRQERLAILYGSDPHRRARLFAFLSTMHGYAVRAFGDFEAALLWLSSGQEGPADVIGVPPGKRIPVKALKREPSPQARPRATRAAAAGATSRARALHR*
Ga0118657_119876011	3300009506	Mangrove Sediment	MPLKLEVIRATEFVRVGPEGHFDLPASRAALAAVARACHKRGIQHAIIDLRALHPGPKPVFSPADLVELVNTFPEVGFTHDLCLAIVYSSDPHKRARLFSFLSTLRGWRVQAFGDFEAALLWLSSGQEKTAEPDRGSANRPAGRRIAIREGATGRRTRSA
Ga0114942_11581842	3300009527	Groundwater	HEFIQMGAHGHFDLAASKAALAGLARACRKRNICQALLDLRALRPGPKPVFSPADLAELVNTFHEIGFTHRQRLAILYHADPHHRARLFAFLSTMHGWHVKAFGDFEAAFIWLSSDLKPVAKRERSASEKAVPLHVGKPTAVTLPVPVTRKHEVAVRKTSARARAARTA*
Ga0105252_100755042	3300009678	Soil	MPLELHIIRAHEFIQMGAHGHFDLAASKAALAGLARACRKRNIDQAMMDLRSLRPGPKPVFSPADLAALVNTFREIGFTHRQRLAILYHSDPHHRARLFAFLSTMHGWHVKAFGEFEEALLWLSGDLESETKRVRSPGEKAIPLQAGKPAAASTPVLVGRKHEVHARKTSARARAVRTA*
Ga0131092_1000846714	3300009870	Activated Sludge	MPLELHIIRAHEFIQMGAHGRFDLAASKAALGHLARACRKRHINQALLDLRWLHPGPKPVFSPADLAELVDTFREAGFSHRERLAILYHADPYHRARRFAFLSRLQGWKVRAFADFEPALLWLSSNPEPESKRARSPKEFSVPLRMGKSLPTPISIPTTPTKKPPTRPRAVRAG*
Ga0131092_100651702	3300009870	Activated Sludge	MPLELHIIRANEFIQMGAHGHFDLVASKAALAQLARACRKRNINQALMDLRALRPGPKPVFTPADLAELVNTFHEFGFTHRERLAILYQSDPHHRARLFAFLGKMHGWNVRAFGDFETALLWLSSGPASEPKRQRSPDEKSIPVRLGKSGAASTLPAPTARSVAHSVRKHLARPRAARAA
Ga0131092_105106871	3300009870	Activated Sludge	MPLELHIIRAQEFIQMGAHGHFDLVASQAALAQLARACRKRNIDQALVDLRALRPGPKPVFTPADLASLVSTFREFGFTHRQRLAILYHSDPHHRARLFAFLGNMHGWNVRAFGDFETALLWLSSGPEPEARRQRSPNEKNIPVRGGKSSAAATLPVPTARSVSHSVRKHPARPRAARAA
Ga0074045_101828981	3300010341	Bog Forest Soil	LGAQGHFDLAASKTALAMIARACRKRGMHQAMMDLRALRPGPKPVFSREDLVELVNTFCKTDFTREHRLAVLYRTDPHHRARLFAFLSVLHGWTVRAFDDFEKALSWLSSGPEAARPTRSPSEKLISVRTSKPEADSMALPIALHEHHEKESSGRKRAVPATRRAGCPGEPSARSLRRPN
Ga0126378_112267411	3300010361	Tropical Forest Soil	MSLELHIIRASEFIRVGAQGHFDLPSSKTALADLALACRKRGIDHAMLDLRALHIGPTPVFTPADLAELVSTFPEAGFTHRQRLAILYSSDPHRRARLFAFLSTMHGWAVKAFGDFEEALVWLSAGEDQLVETQASRGSKQIPVHFARKEAPSRKGGKPRRREPTRKSR*
Ga0136851_102826502	3300010413	Mangrove Sediment	MARPTGPEEALNVLRTEAGIMIVMPQELQIIRASEFIRYNAQGYFDLVASKAALAELAAVCHKRGIHQAMLDLRALRPGPKPVFTPADLAELVGTFREVGFTHREHLAILYHSDPHRRARLFAFLSTMHGWNVRAFGDFEKALLWLSSGEETERGRRASPKAKSVPVRFPQPNAKAAGRPARPGPKHY*
Ga0137428_10488972	3300011432	Soil	MPLELHIIRAHEFIQMGAHGHFDLAASKAALAGLARACRKRNIDQAMMDLRSLRPGPKPVFSPADLAALVNTFREIGFTHWQRLAILYHSDPHHRARLFAFLSTMHGWHVKAFGEFEEALLWLSGDLESETKRVRSPGEKAIPLQAGKPAAASTPVLVGRKHEVHARKTSARARAVRTA*
Ga0137452_11318171	3300011441	Soil	MPLELHIIRAHEFIQMGAHGHFDLAASKAALAGLARACRKRNIDQAMMDLRSLRPGPKPVFTTADLAALVNTFREIGFTHRQRLAILYHSDPHHRARLFAFLSTMHGWQVKAFGEFEEALLWLSGDLESETKRVRSPGEKAIPLQAG
(restricted) Ga0172370_104582102	3300013136	Freshwater	VPQELQIIRASEFIRVGARGYFDLAASKTALADLATACRKRGICHAMIDLRALRPGPEPVFSPADIAELVSTFRAVGFTQRERLAVLYHSDPHHRARLFAMLSTLHGYSVRAFADFEEALLWLSSEEETQPRRRRSPGEKAVPVKFRKP
Ga0173609_110070532	3300013315	Sediment	MPLELQIIRASEFIRLGAQGHFDLAASKTALAELAGACRKRGVNQALLDLRLLRPGPKPVFSPSDLRELVNTFREVGFTQQQRLAVLYHSDPHHRARLFAFLSTLRGWTVQAFSDFEQAIMWLSQEKETAAGCVRSPMEKRIPVRNLKRATKPPGQLRVIRSRQSG
Ga0075346_10422191	3300014306	Natural And Restored Wetlands	MPLELQIIRASEFIRLGAEGHFDLAASKEALAEVAAACRKRGINQALLDLRALRPGPKPVFTPADLFELVNTFRDVGFTAQLRLAILYQTDPHHRARLFAFLSTLRGWTVQAFNDFEKAILWLSRGKDFPVSAARSPAGKHIPVRALKREAHPPARHKMSKPSRPRPVSSSARAR*
Ga0075348_10638332	3300014319	Natural And Restored Wetlands	MPLELQIIRASEFIRLGAEGHFDLAASKEALAEVAAACRKRGINQALLDLRALRPGPKPVFTPADLFELVNTFRDVGFTAQLRLAILYQTDPHHRARLFAFLSTLRGWTVQAFNDFEKAILWLSRGKDFPVSAARSPAGKHIPVR
Ga0075352_12866371	3300014324	Natural And Restored Wetlands	MPQELQIIRANEFIRMGAQGHFDLAASKAALAVLAGACRKRGINQALMDLRALRPGPKPVFSPADLIELVKTFLEVGFTQQQRLAILYQSDPHRRARLFAFLSTLHGWSVQAFGDFEKAILWLSCGTEHPADAPRPAAGKQIPV
Ga0182021_126917741	3300014502	Fen	MPQELQIIRASEFIRFGAQGHFDLPSSKAALAEIAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVSTFREVGFTQQERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEAALLWLSSGQEAGPGRRRSLGEKPVPVRFPKRKARRVRRSAHSRARK*
Ga0182036_103330142	3300016270	Soil	PKCRHFQLDAGDRLANLRSWHKQPSGVLRATITCCERRLNQASPKIFMPQELQIIRASEFIRIGPRGHFDLAASKAALAELVSACRKRGIDHAMMDLRSLHPGPKPVFTPADLAELVRTFPEAGFTQRQKLAILYRSDPHRRARLFAFLSTMHGWAVRAFGDFEEALLWLSEGREPGPDDKPSTGGSQIPVRFANQRSARAARPARSKRRQKSKG
Ga0187877_10296732	3300017931	Peatland	MPQELQIIRASEFIRFGAHGRFDLASSKAALAELAGVCRRRGIAQAMMDLRALHPGPKPVFSPADLAELVGTFREIGFTHQERLAILYHSDPHHRARLFAFLSAMHGWAVRAFGDFEEALLWLSSGQEPGPERRRSPGEKQVPVRFSKRKARPARRPAHSRSKAR
Ga0187853_101801602	3300017940	Peatland	GEWARPRRRPTARACPHEGSAALDRHIATTSAARRPDLGACRRGNPNQVMPQELQIIRASEFIRFGAHGRFDLASSKAALAELAGVCRRRGIAQAMMDLRALHPGPKPVFIPADLAELVGTFREIGFTHQERLAILYHSDPHHRARLFAFLSAMHGWAVRAFGDFEEALLWLSSGQEPGPERRRSPGEKQVPVRFSKRKARPARRPAHSRSKAR
Ga0187777_107706762	3300017974	Tropical Peatland	MPQELQIIRASEFIRFGAQGHFDLCASKKALAEVAFVCRKRGIDQAMLDLRALHPGPKPVFSPADLAELVSTFRAVGFTHQDRLAVLYHSDPHHRARLFAMLSTMHGYAVRAFVDFEEALLWLSSGQETGSARRRTPGEKLVPVRFSRRKATSR
Ga0187873_11779431	3300018013	Peatland	RPCAPDLGACRRGNPNQVMPQELQIIRASEFIRFGAHGRFDLASSKAALAELAGVCRRRGIAQAMMDLRALHPGPKPVFSPADLAELVGTFREIGFTHQERLAILYHSDPHHRARLFAFLSAMHGWAVRAFGDFEEALLWLSSGQEPGPERRRSPGEKQVPVRFSKRKARPARRPAHSRSKAR
Ga0187861_104471771	3300018020	Peatland	PSNESESNMPQELQIIRASEFIRFGAQGHFDLATSKAALAEIAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREIGFTHQERLAILYHSDPHHRARLFAFLSAMHGWAVRAFGDFEEALLWLSSGQEPGPERRRSPGEKQVPVRFSKRKARPARRPAHSRSKAR
Ga0187765_101298162	3300018060	Tropical Peatland	MSLELQIIRASEFIRLGAQGHFDLAASQAALAELAGACRKRGIDRALMDLRALQPGPKPVFSRTDLLALVNKFCEAGFTRQQRLAILYTSDPHRRARLFAFLSTLRGWTVRAFDDFEKALHWLSGGQGDTAGHSRAPGEKSIRVRATRTEPHRAMLPIVPRDPRPREPGHRKLLRKEE
Ga0194058_100503601	3300021071	Anoxic Zone Freshwater	MPQELQIIRASEFIRFGAQGHFDLAASKTALAELAGVCRKRGIAHAMLDLRALHPGPKPVFSPADLAELVGTFREVGFTREDRLAVLYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGQETEPGHRRTPGEKSVPVRFPKREARRVRRSARSRAEK
Ga0194044_101520662	3300021074	Anoxic Zone Freshwater	MPQELQIIRASEFIRFGAQGHFDLPASKEALAELAGVCRKRGIPHAMLDLRALHPGPKPVFSPADLAELVGTFREVGFTREDRLAVLYGSDPHHRARLFAFLSTLHGYAVRAFGDFEEALLWLSSGQETEPGHRRTPGEKSVPVRFPKREARRVRRSARSRAEK
Ga0194053_103289372	3300021520	Anoxic Zone Freshwater	MPQELQIIRASEFIRFGAQGHFDLPASKAALAELAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTQQERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGQETEPGRRRSPGEKPVPVRFPK
Ga0212088_100124164	3300022555	Freshwater Lake Hypolimnion	MPQELQIIRASEFIRFSAQGHFDLAASKTALAELAGVCRKRGIPHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTREDRLAVLYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGQETEPGHRRTPGEKSVPVRFPKREARSARRSAHLRAKK
Ga0209777_100062592	3300027896	Freshwater Lake Sediment	MPQELQIIRASEFIRFGAQGHFDLAASKAALAELAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTREERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGQETEPGHRRSPGEKQVPVRFPKREARPARRSAHSRAKK
Ga0209048_109663451	3300027902	Freshwater Lake Sediment	LAASKTALAELAGMCRKRGIAHAMLDLRALHPGPKPVFSPADLAELVGTFREVGFTQQERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGQEAAPGRRLSPGEKQVPVRFPKREAKAAKRPASSRSKH
Ga0311350_118001341	3300030002	Fen	MPQELQIIRASEFIRFGAHGHFDLPASKAALAELAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFRKVGFTPQERLAVLYGSDPHRRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGEEAHPARRRSPGEKPV
Ga0302323_1020592721	3300031232	Fen	RRLPGWGPKPKLIMPQELQIIRASEFIRFGAHGHFDLPASKAALAELAGVCQKRGIAHAMMDLRALHPGPKPVFSPADLAELVGAFREVGFTQQERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGEETEPGRRRSPGEKPVPVRFPKRKAKPAKRPAPLRSKQ
Ga0316579_103298862	3300031691	Rhizosphere	MPQELQIIRASEFIRFNAHGHFDLAASRVALAEVARACRKRGIAHAMMDLRALHPGPKPVFSPADLAELVNSFRAVGFTRQERLAILYGSDPHRRARLFAFLSTMHGYAVRAFGDFESALLWLSSGQEGSADVIGVPPGKRIPVRESKRELRPPARPRTTRAAGAGAQSRARALHR
Ga0316576_105597502	3300031727	Rhizosphere	MPQELQIIRASEFIRFNAHGHFDLAASRVALAEVARACRKRGIAHAMMDLRALHPGPKPVFSPADLAELVNSFRAVGFTRQERLAILYGSDPHRRARLFAFLSTMHGYAVRAFGDFESALLWLSSGQEGSADVIGVPPGKRIPVRESKREPRPPARPRTTRAAGAGAQSRARALHR
Ga0315290_110037111	3300031834	Sediment	MPQELQIIRASEFIRFGAQGHFDLAASKAALAELAGMCRKRGIAHAMMDLRALHPSPKPVFSPADLAELVGTFREVGFTQQERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGEFEEALLWLSSGQETGPGRRRSPGEKQVPVRFPKREAKAAKRAA
Ga0315290_114129211	3300031834	Sediment	MPQELQIIRASEFIRFGAQGHFDLAASKTALAELAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTQQERLAILYGSDPHHRARLFSFLSTMHGYAVRAFGEFEEALLWLSSGEEACPARRRS
Ga0302322_1032162691	3300031902	Fen	MPQELQIIRASEFIRFGAQGHFDLAASKAALAELAGMCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFRKVGFTPQERLAVLYGSDPHRRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGEEAHPARRRSPGEKPVPVRFLKRKPKAAKRPRTSPAQ
Ga0306921_102436592	3300031912	Soil	VLRATITCCERRLNQASPKIFMPQELQIIRASEFIRIGPRGHFDLAASKAALAELVSACRKRGIDHAMMDLRSLHPGPKPVFTPADLAELVRTFPEAGFTQRQKLAILYRSDPHRRARLFAFLSTMHGWAVRAFGDFEEALLWLSEGREPGPDDKPSTGGSQIPVRFANQRSARAARPARSKRRQKSKG
Ga0310909_104000471	3300031947	Soil	MPQELQIIRASEFIRIGPRGHFDLAASKAALAELVSACRKRGIDHAMMDLRSLHPGPKPVFTPADLAELVRTFPEAGFTQRQKLAILYRSDPHRRARLFAFLSTMHGWAVRAFGDFEEALLWLSEGREPGPDDKPSTGGSQIPVRFANQRSARAARPARSKRRQKS
Ga0315278_106995822	3300031997	Sediment	MPQELQIIRASEFIRFGAQGHFDLRASKTALAEIAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTQQERLAILYGSDPHHRARLFSFLSTMHGYAVRAFGEFEEALLWLSSGEEACPARRRSPGEKQVPVRFLKRKAKAARRPTNSKSKKK
Ga0315278_112539052	3300031997	Sediment	MPQELQIIRASEFIRFGAQGHFDLAASKTALAELAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTQQERLAVLYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALFWLSSGQETDFGRRRSPGEKSVPVRFTK
Ga0316583_102370051	3300032133	Rhizosphere	MPQELQIIRASEFIRFNAHGHFDLAASKVALAEVARACRKRGIAHAMMDLRALHPGPKPVFSPADLAELVNSFRAVGFTRQERLAILYGSDPHRRARLFAFLSTMHGYAVRAFGDFESALLWLSSGQEGSADVIGVPPGKRIPVRESKRELRPPARPRTTRAAGAGAQSRARALHR
Ga0316585_101740901	3300032137	Rhizosphere	MPQELQIIRASEFIRFNAHGHFDLAASKVALAEVARACRKRGIAHAMMDLRALHPGPKPVFSPADLAELVNSFRAVGFTRQERLAILYGSDPHRRARLFAFLSTMHGYAVRAFGDFESALLWLSSGQEGSADVIGVPPGKRIPVRESKREPRPPARPRTTRAAGAGAQSRARALHR
Ga0315912_104776111	3300032157	Soil	RAHEFIQMGAHGHFDLAASKVALAQLARACRKRNIDQALLDLRALHPGPKPVFSPADLAELVNTFREIGFTHRQRLAILYHSDPHHRARLFAFLSSMHGWNVKAFGDFEEAFLWLASGPAPEAKRTRSPDEKLVPLRTTHNSASTTVPVPSPRKSQAGLRKPPPRPARSAKSHAPSVTTRAR
Ga0315283_101845422	3300032164	Sediment	MPQELQIIRASEFIRFGAQGHFDLRASKTALAEIAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTQQERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGEFEEALLWLSSGQETGPGRRRSPGEKEVPVRFPKREAKAAKRPAPSRSKQ
Ga0315268_112073301	3300032173	Sediment	RRPDFGACRPGNPSLVMPQELQIIRASEFIRLGAQGHFDLAASKTALAELAGVCRKRGIAHAMMDLRSLHPCPKPVFSPADLAELVGTFREIGFTQQERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSDQEAESRRRRSPGEKEVPVRFPKREAKAAKRPTNSKSKK
Ga0315271_100131073	3300032256	Sediment	MPLDLQIIRASEFIRLGAQGHFDLAASKAALAEIAAACRKRGINQALLDLRGLRPGPKPVFSPADLIELVNTFREVGFTHEERLAILYHSDPHHRARLFAFLSIVRGWNVRAFGDFEQAILWLGEGTAPATAAPRSPGEKRIPVRDRKRESNRPARPRRTKTVKPRSPSPAD
Ga0315271_100146902	3300032256	Sediment	MELQIIRASEFIRFGAQGHFDLTASKAALAALAEACRKRDIHQALMDLRALKPGPKPVFSSADLLELVNTFHEVGFTHQQRLAILYQSDPHHRARLFAFLSTLHGWSVRAFGDFEGALHWLSSGIDSPTKATRSPSEKKVPVRDLKHEANLPARSTKRGR
Ga0315271_100881331	3300032256	Sediment	MSLELHIIHATDFVRVDPHGQFDLAASRAALALMAGACRKRGINQALLDLRALRAGPKPVFSPADLAELVSTFREAGFTHQQRLALLYHSDPYKRTRLFAFLSTVHGWHVRAFGSFEDALHWLSCNPETSDKSERSPGERQIPVRVL
Ga0315271_101662202	3300032256	Sediment	LDQPDDDRRTTLILIMPLDLQIIRASEFIRLGAHGHFDLAASKAALAEIAAACRKRGINQALLDLRPLQPGPKPVFSPADLIELVNTFREVGFTHEERLAILYHSDPHHRARLFAFLSIVRGWNVRAFGDFEQAILWLGEVTEPATAEPRSPAEKRIPVRDRKRESNRPARPRRTKTVKPRSSSPAR
Ga0306920_1001653623	3300032261	Soil	MPQELQIIRASEFIRIGPRGHFDLAASKAALAELVSACRKRGIDHAMMDLRSLHPGPKPVFTPADLAELVRTFPEAGFTQRQKLAILYRSDPHRRARLFAFLSTMHGWAVRAFGDFEEALLWLSEGREPGPDDKPSTGGSQIPVRFANQRSARAARPARSKRRQKSKG
Ga0315270_100450082	3300032275	Sediment	VDSLPVRQKVQYPADRPGRRVNFAPRSKPDQLGSKWKPDTTRLDQPDDDRRTTLILIMPLDLQIIRASEFIRLGAQGHFDLAASKAALAEIAAACRKRGINQALLDLRGLRPGPKPVFSPADLIELVNTFREVGFTHEERLAILYHSDPHHRARLFAFLSIVRGWNVRAFGDFEQAILWLGEGTAPATAAPRSPGEKRIPVRDRKRESNRPARPRRTKTVKPRSPSPAD
Ga0315270_101884321	3300032275	Sediment	MELQIIRASEFIRFGAQGHFDLTASKAALAALAEACRKRDIHQALMDLRALKPGPKPVFSSADLLELVNTFHEVGFTHQQRLAILYQSDPHHRARLFAFLSTLHGWSVRAFGDFEKALEWLSSVVDSPTRSTRSASEKEVPVRNLKREASLPARSKTRGR
Ga0315275_102434923	3300032401	Sediment	MPLELQIIRASEFIRLGAHGHFDLAASKAALAELVGACRKRGINQALMDLRALHPGPKPVFSPADLITLVNTFREIGFTHQQRLAILYGSDPHHRARLFAFLSTVRGWSVRAFSNFEEALLWLSSAPETAAQLSRSPAGKRIPVRDLKQEAKPPAPPVCLPGRQERETSARKRLASAMRRAGCSSQRPVSSRSRLSQTMKLNRTKLTRE
Ga0335085_1000481315	3300032770	Soil	MSLELQIIRASEFIRLGAQGHFDLAASQAALTELAGACRKRGIDRALMDLRALQPGPKPVFSRTDLLTLVNKFCEAGFTRQQRLAILYTSDPHRRARLFAFLSTLHGWTVRAFDDFEKALHWLSGGQGDMARHGRAPGEKSIRVRATRTEPHPAMLPILPRESQTRAPGHRKLLRKE
Ga0335082_102711482	3300032782	Soil	MPLELQIIRASEFIRLGAHGHFDFAASKAALAELARACRQRNLDRALMDLRALQPGPKPVFSREDLVELVKTFCEVGFTRRLRLAVLYQSDPHRRARLFAFLSTLHGWNVRAFGDFEKALLWLSAGGEAAVAPSRAPGAQVVPVHTRMPGAKPAPAHRSRPDKSARKANP
Ga0335082_107645811	3300032782	Soil	MPQELQIIRASEFIRFGAQGYFDLAASKAALAELASACRKRGIAHAMVDLRALRPGPKPVFSPADVAELVNTFRDVGFTQEDRLAVLYHSDPHRRARLFAMLSTMHGYAVRAFADFEEALLWLSSGQETKTTRRRSPGEKPVAVRFSKAKIERPARPTGPPRKPGPANSISLDS
Ga0335082_115759381	3300032782	Soil	IIRASEFIRLGAHGHFDLAASKAALAVLARACRKRGIDRALMDLRALQPGPKPVFSRDDLIALVNTFHEVGFTRQQRLAILYRSDPHHRARLFAFLSTVRGWTVRAFDDFEKALSWISSGPEAARPARSAAEKLIPVRTSARKADPAALPVMLRKPLESAGPKTTAAARRPGPSDK
Ga0335079_112329571	3300032783	Soil	MPQELQIIRASEFIRFGVHGHFDLAASKAALADVALACRKRGIDQAMIDLRALHPGPKPVFSPADLAELVNSFRAAGFTHRDRLAVLYHSDPHHRARLFAMLSTMHGYAVRAFADFEEALLWLSGSQEAGTRRRQSPGEKPVPVRFSESAARRPPRPVSPPRRQQHRHVA
Ga0335079_119437921	3300032783	Soil	MPLELQIIRASEFIRLGAQGHFDLAASKTALATIARACRKRGIERALMDLRALRPKPKPVFSRADLIALVNTFHEVGFTRQDRLAVLYHSDPHHRTRLFAFLSTMRGWTVRAFDDFEKALSWLSSGPETAPRPARSAAEKPIRVRTPKREAEPTMLTVSLSQRPEKAFGGRTRAAV
Ga0335078_113218712	3300032805	Soil	MSLELQIIRASEFIRLGAQGHFDLAASKAALAVLARACRKRGIDRALMDLRALRPKPKPVFSRADLIALVNTFHEAGFTRQDRLAVLYHSDPHHRTRLFAFLSTLHGWTVRAFDDFEAALHWLSSGPEAAARPARSAAEKLIHVRTSKREAEPALLTVSQTGHHRKMPGGQKRTVAAMSHSRFARADSRIRRPN
Ga0335078_116089291	3300032805	Soil	MPQELQIIRASEFIRLGAHGHFDLPASKAALSELATACRKRGIEQAMIDLRELRPGPKPVFSPADLAELVATFRKVGFTHRERLAVLYRQDPHRRARLFAFLSTMHGWNVRAFTEFEEALAWLSQNEPPEPRMLAPGEKRIRVRTRKREARP
Ga0335080_111014702	3300032828	Soil	MPLELQIIRASEFIRLGAHGHFDFAASKAALAELARACRQRNLDRALMDLRALQPGPKPVFSREDLVELVKTFCEVGFTRRLRLAVLYQSDPHRRARLFAFLSTLHGWNVRAFGDFEKALLWLSAGEEAAVAHTRAPGEKVIPVRLRMPGAKPAPAHRSRPDKSARKANP
Ga0335070_102104463	3300032829	Soil	MPLELQIIRASEFIRLGAQGRFDLAASKTALTVIARACRKRGLHQALIDLRDLRPGPKPVFDRDDLVELVQTFCRIDFTREHRLAVLYRTDPHHRVRLFAFLSVLHGWTVRAFDDFEQAVAWLSSGPEPACPARSPAEKPVAVRSPKREEDSAALPVFLAGHHPKASGGPKRAAVRMQRPAHPPTRSLRSQSR
Ga0335081_126145951	3300032892	Soil	ATNSYFMSLELQIIRASEFIRLGAQGHFDLAASKAALAVLARACRKRGIDRALMDLRALRPKPKPVFSRADLIALVNTFHEAGFTRQDRLAVLYHSDPHHRTRLFAFLSTLHGWTVRAFDDFEAALHWLSSGPEAAARPARSAAEKLIHVRTSKREAEPALLTVSQTGHHRK
Ga0335069_101051412	3300032893	Soil	MPLELQVIRASEFIRLGAHGHFDLAASKTALAVLARACRKRGIERALMDLRALRPGPKPMFSRADLIALVNTFHEVGFTRQQRLAVLYHSDPHHRTRLFAFLSTLRGWTVRAFDDFEQAMSWLSSGEETVARPARSPTEKPIPVRVPKREADPAAQPIALHAHQVKESGGRKRAGSALRRASRTGCAGESPARSRLTRYH
Ga0335069_103071862	3300032893	Soil	MPLELQIIRASEFIRLGAQGRFDLAASKTALAVIARACRKRGLHQALIDLRALRPGPKPVFSRDDLVELVNTFCRVDFTREHRLAVLYHTDPHHRVRLFAFLSVLHGWTVRAFDDFEKALSWLSSGPETAERPARSPAEKPIHVRAPKPEVEPAPLAVTLTGHREKATAGRKRAIAGHRMACPPARSARSQPR
Ga0335069_110175721	3300032893	Soil	MPLELQIIRAAEFVRLGAHGHFDLAASKAALAVLVGSCRKRGINQALMDLRALQPGPKPVFTRSDLIALVNTFREIGFTEQQRLAILYQSDPHRRARLFAFLSKLHGWTVQAFSDYEEALHWLSSGQEAIAQPARSAAGKPLRVRTASRGSDPSPLPIA
Ga0335071_101409811	3300032897	Soil	MSRGSRRASACRARRVPGAGPKPRLIVPQELQIIRASEFIRFGAHGHFDLPASKAALAEIAGMCRKRGIAHAMMDLRALHPGPKPVFTPADLAELVGTFRGIGFTQQERLAVLYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGRETKPGRRRSPGQKKVPIRFTKHGAKPARRFGRSRAKAA
Ga0335071_114653741	3300032897	Soil	MPLELQIIRASEFIRLGAHGHFDLAASKTALAALARACRKRGIDRALMDLRSLQPGPTPVFSRDDLIALVNTFHEVGFTRQQRLGILYKSDPHHRARLFAFLSTVRGWTVRAFDDFEKALSWLSSGPDSAAQPVRSSAGKPVPLRYLKRKEVLPLRTVPPSGRRKKGGKQSNAALHRRWVSGPRTNLSR
Ga0335077_118101641	3300033158	Soil	MPQELQIIRASEFIRFGVHGHFDLAASKAALADVALACRKRGIDQAMIDLRALHPGPKPVFSPADLAELVNSFRAAGFTHRDRLAVLYHSDPHHRARLFAMLSTMHGYAVRAFADFEEALLWLSGSQEAGTRRRQSPGEKPVPVRFSESAARRPP
Ga0316625_1013791412	3300033418	Soil	MPQELQIIRASEFIRFGAHGHFDLGASKAALAELAGMCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTREERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGEETRPANRRSPGEKQVPVRFPKREARAAKRPAPSRSKQ
Ga0316629_113499281	3300033483	Soil	VPLELQIIRASEFVRLGAHGHFDLAASKAALAELVGACRKRGINQALMDLRALHPGPKPVFSPADLIALVNTFREIGFTHQQRLAILYGSDPHHRARLFAFLSTVRGWSVRAFSNFEEALLWLSSAPETAAQLSQSPAGKRIPVRDLKQAAKPP
Ga0316626_121091761	3300033485	Soil	MPQELQIIRASEFIRFGAQGHFDLPASKAALAELAAVCRKRGIAHAMLDLRALHPGPKPVFSPADLAELVGTFHEVGFTRQERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGAGPSPARRRSPGEKQVPVRFAQ
Ga0316616_1012591422	3300033521	Soil	MPQELQIIRASEFIRFGAHGHFDLGASKAALAELAGVCRKRGIAHAMMDLRALHPGPKPVFSPADLAELVGTFREVGFTREERLAILYGSDPHHRARLFAFLSTMHGYAVRAFGDFEEALLWLSSGGEASPKPRRFPGEKLVSVRFLKRKAKARRPAASRSKT
Ga0316616_1019520882	3300033521	Soil	EFIQMGAHGHFDLAASKEALAGIARACRKRNIDQALMDLRALRPGPKPVFSPADLAELVNSFREIGFTPRQRLAILYQSDPHHRARLFAILSAQHGWTVQAFSDFEEALLWLSQAPEPAPRRERSPGEKLIPLQIAKSGSSPRPRVHTPRRPGTVARKARIKPRAVRTA
Ga0316616_1030128682	3300033521	Soil	MPLELQIIRASEFIRLGAHGHFDLAASKAALAELVGACRKRGINQALMDLRALRPGPKPVFSPADLIALVNTFREIGFTHEQRLAILYRSDPHHRARLFAFLSTIRGWSVRAFGNFEEAYLWLSSAPETAAKLSRSPAGKRIPVRGLRQEAKPPAAR
Ga0316617_1010831292	3300033557	Soil	QGHFDLAASKAGLAEVARVCRKRGIDQAMLDLRALHPGPKPVFSPADLAELVSTFREVGFTHHHRLAILYHSDPHRRARLFAFLSTMHGWAVRAFGDFEEALLWLSSGEPPGPGRLRSPGEKPVPVRFPKGKPRAARQRSSSRSKQK
Ga0316617_1022096361	3300033557	Soil	MPLELQIIRASEFVRLGAHGHFDLAASKAALAELVGACRKRGINQALMDLRALHPGPKPVFSPADLIALVNTFREIGFTHQQRLAILYGSDPHHRARLFAFLSTVRGWSVRAFSNFEESLHWLSSAPETAAQLSRSPAGKRIPVRNLRQEANPPAAPVRRPGRQERETIGRKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters