Metagenome / Metatranscriptome Family F097578

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097578
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	97 residues
Representative Sequence	IRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Number of Associated Samples	93
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.97 %
% of genes near scaffold ends (potentially truncated)	97.12 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.077 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.500 % of family members)
Environment Ontology (ENVO)	Unclassified (38.462 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.231 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 17.89% β-sheet: 8.42% Coil/Unstructured: 73.68%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07238	PilZ	7.69
PF13924	Lipocalin_5	3.85
PF13620	CarboxypepD_reg	2.88
PF00111	Fer2	2.88
PF00034	Cytochrom_C	1.92
PF07676	PD40	1.92
PF01799	Fer2_2	1.92
PF06240	COXG	1.92
PF02515	CoA_transf_3	1.92
PF02776	TPP_enzyme_N	0.96
PF04199	Cyclase	0.96
PF08818	DUF1801	0.96
PF01261	AP_endonuc_2	0.96
PF06736	TMEM175	0.96
PF01564	Spermine_synth	0.96
PF13469	Sulfotransfer_3	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	1.92
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	1.92
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.96
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.96
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.96
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.96
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.08 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	85.58 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.77 %
Unclassified	root	N/A	1.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	84.62 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.92 %
Unclassified	root	N/A	1.92 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	83.65 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	1.92 %
Unclassified	root	N/A	1.92 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.96 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	83.65 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1.92 %
Unclassified	root	N/A	1.92 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.96 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002076\|JGI24749J21850_1033738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300004019\|Ga0055439_10135750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300004463\|Ga0063356_100693991	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1398	Open in IMG/M
3300005093\|Ga0062594_100146577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1536	Open in IMG/M
3300005293\|Ga0065715_10055431	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300005294\|Ga0065705_10725751	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	604	Open in IMG/M
3300005295\|Ga0065707_10018984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2465	Open in IMG/M
3300005333\|Ga0070677_10281579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300005334\|Ga0068869_100854744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300005335\|Ga0070666_11352854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300005338\|Ga0068868_102054304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300005339\|Ga0070660_101511672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	571	Open in IMG/M
3300005354\|Ga0070675_101275620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300005364\|Ga0070673_100243736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1564	Open in IMG/M
3300005406\|Ga0070703_10174474	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300005440\|Ga0070705_100464391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300005444\|Ga0070694_100669481	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300005445\|Ga0070708_101619201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300005456\|Ga0070678_101134877	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300005518\|Ga0070699_101373624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300005536\|Ga0070697_100029255	All Organisms → cellular organisms → Bacteria → Proteobacteria	4415	Open in IMG/M
3300005536\|Ga0070697_100784676	Not Available	843	Open in IMG/M
3300005536\|Ga0070697_102010677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300005546\|Ga0070696_101343680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300005549\|Ga0070704_100296045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1346	Open in IMG/M
3300005564\|Ga0070664_100356729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1331	Open in IMG/M
3300005569\|Ga0066705_10391721	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005713\|Ga0066905_102148153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300005718\|Ga0068866_11441058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005840\|Ga0068870_10433237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300005840\|Ga0068870_11284088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300005843\|Ga0068860_101876694	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300006237\|Ga0097621_100118716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2241	Open in IMG/M
3300006806\|Ga0079220_10354587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300006844\|Ga0075428_100015383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	8484	Open in IMG/M
3300006844\|Ga0075428_100269377	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1832	Open in IMG/M
3300006845\|Ga0075421_100492590	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1458	Open in IMG/M
3300006880\|Ga0075429_100178196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1862	Open in IMG/M
3300006881\|Ga0068865_100816860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	805	Open in IMG/M
3300006894\|Ga0079215_10271450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	915	Open in IMG/M
3300006904\|Ga0075424_100533872	All Organisms → cellular organisms → Bacteria	1253	Open in IMG/M
3300006904\|Ga0075424_100782206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1018	Open in IMG/M
3300006914\|Ga0075436_101163406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300009012\|Ga0066710_102066895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300009156\|Ga0111538_12120124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300009156\|Ga0111538_14026616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300009162\|Ga0075423_11098497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300009162\|Ga0075423_11621884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300009162\|Ga0075423_12466071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300009174\|Ga0105241_10995124	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300009176\|Ga0105242_12555184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300009235\|Ga0103857_10088488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300010047\|Ga0126382_12046654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300010362\|Ga0126377_10887692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300010373\|Ga0134128_11220583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300011119\|Ga0105246_10246811	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300011415\|Ga0137325_1132495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300012167\|Ga0137319_1048123	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300012205\|Ga0137362_11163436	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300012469\|Ga0150984_110839359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1726	Open in IMG/M
3300012512\|Ga0157327_1065585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300012912\|Ga0157306_10191113	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300012944\|Ga0137410_11034439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300012960\|Ga0164301_11070047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300013296\|Ga0157374_10340151	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1490	Open in IMG/M
3300014269\|Ga0075302_1120020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	611	Open in IMG/M
3300015200\|Ga0173480_10964985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300015359\|Ga0134085_10567626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300015371\|Ga0132258_13672210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1048	Open in IMG/M
3300015373\|Ga0132257_100202892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2350	Open in IMG/M
3300018028\|Ga0184608_10107088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1173	Open in IMG/M
3300018071\|Ga0184618_10122255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1041	Open in IMG/M
3300018466\|Ga0190268_10305567	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	958	Open in IMG/M
3300018466\|Ga0190268_11221862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300019362\|Ga0173479_10821730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300021080\|Ga0210382_10191185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300022553\|Ga0212124_10646640	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300025315\|Ga0207697_10175255	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	939	Open in IMG/M
3300025885\|Ga0207653_10166661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300025908\|Ga0207643_10215018	All Organisms → cellular organisms → Bacteria → Acidobacteria	1175	Open in IMG/M
3300025908\|Ga0207643_10895020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300025932\|Ga0207690_11497273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300025933\|Ga0207706_11658660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300025935\|Ga0207709_10091472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1990	Open in IMG/M
3300025938\|Ga0207704_10841018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	769	Open in IMG/M
3300025940\|Ga0207691_10315249	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1341	Open in IMG/M
3300025942\|Ga0207689_10756749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300025945\|Ga0207679_10952270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300025960\|Ga0207651_11490024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300025986\|Ga0207658_11830831	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300026075\|Ga0207708_10033732	All Organisms → cellular organisms → Bacteria	3891	Open in IMG/M
3300026095\|Ga0207676_11219707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300026118\|Ga0207675_100014754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7288	Open in IMG/M
3300026121\|Ga0207683_10891727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_68_18	826	Open in IMG/M
3300026325\|Ga0209152_10274317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300027775\|Ga0209177_10268548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300027909\|Ga0209382_10675302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1115	Open in IMG/M
3300031170\|Ga0307498_10333366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300031547\|Ga0310887_10512396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	724	Open in IMG/M
3300031940\|Ga0310901_10050857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1356	Open in IMG/M
3300032122\|Ga0310895_10093476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300032122\|Ga0310895_10444185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300032180\|Ga0307471_101602576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	51.92%
Environmental	Environmental	48.08%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	51.92%
Terrestrial	Environmental → Terrestrial	39.42%
Aquatic	Environmental → Aquatic	8.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	21.15%
Sediment	Environmental → Aquatic → Sediment	3.85%
Freshwater	Environmental → Aquatic → Freshwater	2.88%
Marine	Environmental → Aquatic → Marine	1.92%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	17.31%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.35%
Loam	Environmental → Terrestrial → Soil → Loam	12.50%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.88%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Lake	Environmental → Aquatic → Freshwater → Lake	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	17.31%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.35%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.88%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.92%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.92%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.96%
River Water	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → River Water	0.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.96%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300004019	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009235	Microbial communities of water from Amazon river, Brazil - RCM10	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300012167	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT333_2	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014269	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022553	Powell_combined assembly	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24749J21850_10337383	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	MLYFPNGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0055439_101357501	3300004019	Natural And Restored Wetlands	MMTINLFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAANINLRKLDVDYHAPIHGDYVTNKQFLDSLIFMTQFLPGTKSTN*
Ga0063356_1006939912	3300004463	Arabidopsis Thaliana Rhizosphere	NTHADSMLMLYFPNGKILTQPDIYMPNDKRNVIDGEPLGHAPWLRNLMGNITVRRLDVEYHAPIHGDYVPHSHFLDALTFMTQFVPGSGATN*
Ga0062594_1001465773	3300005093	Soil	ADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0068993_100985711	3300005183	Natural And Restored Wetlands	DIYMPNDARNVIAGEPLGHAPWLQNLAANINLRKLDVDYHAPIHGDYVTNKQFLDSLIFMTQFLPGTKSTN*
Ga0065715_100554312	3300005293	Miscanthus Rhizosphere	KITAVDDTGVLRDAMMTVNIYHVRDNSHADSMLMLYFPGGKILTQPDIYMPNDGRNVIDGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSAIFMTQFVPGGKSTN*
Ga0065705_107257511	3300005294	Switchgrass Rhizosphere	KITAIDDTGVLRDSMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAANINLRRLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0065707_100189844	3300005295	Switchgrass Rhizosphere	DDLAKKGNGKLPKITAIDDTGVLRDSMMTINTFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAANINLRKLEVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0070677_102815791	3300005333	Miscanthus Rhizosphere	TGVLRDSMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0068869_1008547443	3300005334	Miscanthus Rhizosphere	QPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0070666_113528542	3300005335	Switchgrass Rhizosphere	DDTGVLRDSMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDHVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0068868_1020543041	3300005338	Miscanthus Rhizosphere	SMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0070660_1015116721	3300005339	Corn Rhizosphere	LMLYFPNGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0070675_1012756201	3300005354	Miscanthus Rhizosphere	GKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGTKSTN*
Ga0070673_1002437363	3300005364	Switchgrass Rhizosphere	TINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0070703_101744742	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VNMYHVRDNSHADSMLMLYFPSGKILTQPDIYMPNDARNVIDGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSVIFMTQFVPGGKSTN*
Ga0070705_1004643911	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	TGVLRDSMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0070694_1006694811	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DDLAKKGSVKLPKITAIDDTGVLRDAMMTVNMFHIRDNSHADSMLMLYFPGGKILTQPDIYMPNDARNVIEGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGAKSTN*
Ga0070708_1016192011	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	ADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDHVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0070678_1011348771	3300005456	Miscanthus Rhizosphere	TGVLRDSMMTINMFHIRDNSHADSMLMLYFPIGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0070699_1013736242	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	DGTLTINLYHILDNTHADSMVMIYFPNGRILTEADVYMPNDDRNVIADEPLGHAPWLQNLLGNITLRKLQVDHIAPIHGDYVPYSQFLESVITMTQFLPRKASTN*
Ga0070697_1000292553	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	DDTGVLRDAMMTIDMFHIRDNSHADSMLMLYFPTGKVLTQPDIYMPNDARNVIEGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNRQFLDSLIFMTQFVPGAKATN*
Ga0070697_1007846762	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	KILTQPDIYMPNDARNVITGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGTKSTN*
Ga0070697_1020106771	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	INPDLFARKPSAKPVKITAIDDEGVVKDGTLTINLYHILDNTHADSMVMIYFPNGRILTEADVYMPNDDRNVIADEPLGHAPWLQNLLGNITLRKLQVDHIAPIHGDYVPYSQFLESVITMTQFLPRKASTN*
Ga0070696_1013436801	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MFHIRDNSHADSMLMLYFPGGKILTQPDIYMPNDARNVIEGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGAKATN*
Ga0070704_1002960451	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	PGGKILTQPDIYMPNDARNVIEGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGAKSTN*
Ga0070664_1003567293	3300005564	Corn Rhizosphere	MFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0066705_103917212	3300005569	Soil	SHTINPDDLAKKGNVKLPKITAVDDTGVLRDAMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIEGEPLGHAPWLQNLAANIALRKLDVQYHAPIHGDYVTNKQFLDSLIFMTQFVPGSKSTN*
Ga0066905_1021481531	3300005713	Tropical Forest Soil	RLPKITPIDDEGVLRDGTMTINLYHIRDNSHADSMVMVYFPNGKVLTQPDIYMPNDKRNIIDGEPYGHAPWLQNFMANITLRKLDVAWHAPIHGDYVPHSQFLDALVSMTQFVPPRSSTN
Ga0068866_114410582	3300005718	Miscanthus Rhizosphere	LYFPIGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDHVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0068870_104332372	3300005840	Miscanthus Rhizosphere	GKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0068870_112840882	3300005840	Miscanthus Rhizosphere	SMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0068860_1018766941	3300005843	Switchgrass Rhizosphere	KILTQPDIYMPNDARNVIEGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGAKSTN*
Ga0097621_1001187162	3300006237	Miscanthus Rhizosphere	DDTGVLRDSMMTINMFHIRDNSHADSMLMLYFPIGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0079220_103545872	3300006806	Agricultural Soil	VDDTGVLRDGMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIDGEPLGHAPWLQNLAANIALRKLDVDYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0075428_1000153839	3300006844	Populus Rhizosphere	DNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGTKSTN*
Ga0075428_1002693773	3300006844	Populus Rhizosphere	DNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDHVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0075421_1004925902	3300006845	Populus Rhizosphere	VYFPNGKVLTQPDIYMPNDKRNIIDGEPYGHAPWLQNFMANIMLRKLDVAWHAPIHGDYVPHSQFLDALVFMTQFVPPRTSTN*
Ga0075429_1001781961	3300006880	Populus Rhizosphere	HADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0068865_1008168601	3300006881	Miscanthus Rhizosphere	SHADSMLMLYFPGGKILTQPDIYMPNDARNVIEGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGAKSTN*
Ga0079215_102714502	3300006894	Agricultural Soil	SHADSMVMVYFPNGKVLTQPDIYMPNDKRNIIEGEPYGHAPWLQNFMANITLRKLDVSSHAPIHGDYVPHSQFLDALVFMTQFVPPRSSTN*
Ga0075424_1005338721	3300006904	Populus Rhizosphere	IVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGTKSTN*
Ga0075424_1007822062	3300006904	Populus Rhizosphere	NMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIDGEPLGHAPWLQNLAANINLRKLDVEYHAPIHGDYVTNRQFLDSLIFMTQFVPGGKATN*
Ga0075436_1011634062	3300006914	Populus Rhizosphere	VLRDSMMTINMFHIRDNSHADSMLMLYFPNGKILTQPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGTKSTN*
Ga0066710_1020668952	3300009012	Grasslands Soil	VNTHADSMVMIYFPNGRILTEADVYMPNDDRNVIAGEPLGHAPWLQNLLGNITLRKLQVEHIAPIHGEYVPYSQFLESVITMTQFLPRKA
Ga0111538_121201242	3300009156	Populus Rhizosphere	FPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0111538_140266161	3300009156	Populus Rhizosphere	INMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGTKSTN*
Ga0075423_110984972	3300009162	Populus Rhizosphere	VDDTGVLRDGMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIDGEPLGHAPWLQNLAANIALRKLDVDYHAPIHGDYVTNKQFLDSLIFMTQFVPDSKSTQ*
Ga0075423_116218842	3300009162	Populus Rhizosphere	MTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQYLPGTKSTN*
Ga0075423_124660712	3300009162	Populus Rhizosphere	SMLMLYFPNGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0105241_109951242	3300009174	Corn Rhizosphere	RDNSHADSMLMLYFPIGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0105242_125551841	3300009176	Miscanthus Rhizosphere	QPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDHVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0103857_100884882	3300009235	River Water	ADSMLMLYFPASKVVTQPDIYMPNDARNVIAGEPLGHAPWLQNLLANINLRKLDVDSHAPIHGDYVPNSQFLESVIFMTQFLPGGRATN*
Ga0126382_120466541	3300010047	Tropical Forest Soil	NSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGTKSTN*
Ga0126377_108876921	3300010362	Tropical Forest Soil	MFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGTKSTN*
Ga0134128_112205831	3300010373	Terrestrial Soil	MLMLYFPGGKILTQPDIYMPNDARNVIDGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSVIFMTQFVPGGKSTN*
Ga0105246_102468113	3300011119	Miscanthus Rhizosphere	PDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0137325_11324951	3300011415	Soil	DEGVLRDSTMTINLYHIRDNSHADSMVMVYFPNGKVLTQPDIYMPNDKRNIIDSEPYGHAPWLQNFMANIMLRKLDVAWHAPIHGDYVPHSQFLDALVFMTQFVPPRSSTN*
Ga0137319_10481232	3300012167	Soil	VMVYFPNGKVLTQPDIYMPNDKRNIIDSEPYGHAPWLQNFMANIMLRKLDVAWHAPIHGDYVPHSQFLDALVFMTQFVPPRSSTN*
Ga0137362_111634361	3300012205	Vadose Zone Soil	ADSMVMIYFPNGRILTEADVYMPNDDRNVIAGEPLGHAPWLQNLLGNINLRKLQVDHIAPIHGEYVPYSQFLESVITMTQFLPRKASTN*
Ga0150984_1108393591	3300012469	Avena Fatua Rhizosphere	ALNPDELSKKGNVKLPKITAIDDTGILRDGMMTVNMYHVRDNSHADSMLMLYFPNGKILTQPDIYMPNDARNVIEGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGAKSTN*
Ga0157327_10655852	3300012512	Arabidopsis Rhizosphere	FHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAANINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0157306_101911131	3300012912	Soil	IDDTGVLRDSMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQYVPGSKSTN*
Ga0137410_110344391	3300012944	Vadose Zone Soil	KITAIDDTGVLKDNMMTVNMYFIRDNSHADSMLMMYFPNGKILTQPDVYMPNDARNIIEGAPLGHAPWMQNLLANITLRKLDVDYHAPIHGDYVPNSQFLESVIFMTQFVPGKTSTN*
Ga0164301_110700471	3300012960	Soil	KILTQPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQYLPGTKSTN*
Ga0157374_103401511	3300013296	Miscanthus Rhizosphere	HADSMLMLYFPNGKIVTQPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0075302_11200201	3300014269	Natural And Restored Wetlands	TGVLRDSMMTINLFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAANINLRKLDVDYHAPIHGDYVTNKQFLDSLIFMTQFLPGTKSTN*
Ga0173480_109649852	3300015200	Soil	PNGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNVNLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN*
Ga0134085_105676261	3300015359	Grasslands Soil	GKILTQPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGTKSTN*
Ga0132258_136722101	3300015371	Arabidopsis Rhizosphere	DNSHADSMLMLYFPNGKILTQPDIYMPNDARNVIDGEPLGHAPWLQNVAGNIALRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGAKSTN*
Ga0132257_1002028921	3300015373	Arabidopsis Rhizosphere	GVLRDSMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQYLPGTKSTN*
Ga0184608_101070881	3300018028	Groundwater Sediment	NTHADSMVMIYFPNGRILTEADVYMPNDDRNVIADEPLGHAPWLQNLLGNITLRKLQVDHIAPIHGDYVPYSQFLESVITMTQFLPRKASTN
Ga0184618_101222552	3300018071	Groundwater Sediment	MVMIYFPNGRILTEADVYMPNDDRNVIADEPLGHAPWLQNLLGNIILRKLQVDHIAPIHGDYVPYSQFLESVITMTQFLPRKASIN
Ga0190268_103055671	3300018466	Soil	VKLPTITAIDDEGVIRDGVMTINLYHIRDNTHADSMLMLYFPNGKILTQPDIYMPNDKRNVIEGEPLGHAPWLQNLMGNITVRRLDVEYHAPIHGDYVPHSHFLEALTFMTQFLPTKTST
Ga0190268_112218621	3300018466	Soil	RLPKITAIDDEGVLRDGMMTINLYHIRDNTHADSMLMLYFPNGKVLTQGDIYMPNDKRNIIEGEPYGHAPWLQNFMANITLRKLDVAWHAPIHGDYVPHSQFLDALLFMTQFVPPKTSTI
Ga0173479_108217302	3300019362	Soil	AKPVKITAIDDEGVVKDGTLTINLYHILDNSHADSMVMVYFPNGRILTEADVYMPNDDRNVIEGEPLGHAPWLQNLLGNINLRKLQVDHIAPIHGEYVPYSQFLESVITMTQFLPGKAST
Ga0210382_101911852	3300021080	Groundwater Sediment	MVMIYFPNGRILTEADVYMPNDDRNVIADEPLGHAPWLQNLLGNITLRKLQVDHIAPIHGDYVPYSQFLESVITMTQFLPRKASTN
Ga0212124_106466401	3300022553	Freshwater	SMVMLYFPGGRILTEADVYMPNDDRNIIDGEPLGHAPWLQNLLGNITLRKLQVDHIAPIHGEYVPYSQFLESTITMTQFVPGKKATN
Ga0207697_101752552	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0207653_101666612	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	RDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIDGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSVIFMTQFVPGGKSTN
Ga0207643_102150183	3300025908	Miscanthus Rhizosphere	MFHIRDNSHADSMLMLYFPIGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0207643_108950202	3300025908	Miscanthus Rhizosphere	ITAIDDTGVLRDSMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0207690_114972731	3300025932	Corn Rhizosphere	TINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0207706_116586602	3300025933	Corn Rhizosphere	IRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQYVPGSKSTN
Ga0207709_100914721	3300025935	Miscanthus Rhizosphere	IRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0207704_108410182	3300025938	Miscanthus Rhizosphere	LFHIRDNSHADSMLMLYFPGGKILTQPDIYMPNDARNVIEGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGAKSTN
Ga0207691_103152491	3300025940	Miscanthus Rhizosphere	VLRDSMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0207689_107567491	3300025942	Miscanthus Rhizosphere	LMLYFPNGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0207679_109522701	3300025945	Corn Rhizosphere	HIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0207651_114900241	3300025960	Switchgrass Rhizosphere	VTRPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQYLPGTKSTN
Ga0207658_118308311	3300025986	Switchgrass Rhizosphere	AKPVKITAIDDEGVVKDGTLTINLYHILDNSHADSMVMVYFPNGRILTEADVYMPNDDRNVIEGEPLGHAPWLQNLLGNINLRKLQVDHIAPIHGEYVPYSQFLESVITMTQFLPGKPSI
Ga0207708_100337321	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GGKILTQPDIYMPNDARNVIEGEPLGHAPWLQNLAGNIALRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFVPGGKATN
Ga0207676_112197071	3300026095	Switchgrass Rhizosphere	NGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0207675_1000147541	3300026118	Switchgrass Rhizosphere	GKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDHVTNKQFLDSLIFMTQFLPGSKSTN
Ga0207683_108917273	3300026121	Miscanthus Rhizosphere	DIYMPNDARNVLPGEPLGHAPWLQNLAGNVNLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0209152_102743172	3300026325	Soil	SMLMLYFPNGKIVTQPDIYMPNDARNVIEGEPLGHAPWLQNLAANIALRKLDVQYHAPIHGDYVTNKQFLDSLIFMTQFVPGSKSTN
Ga0209177_102685482	3300027775	Agricultural Soil	RDSMMTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVLPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVTNKQFLDSLIFMTQFLPGSKSTN
Ga0209382_106753022	3300027909	Populus Rhizosphere	VYFPNGKVLTQPDIYMPNDKRNIIDGEPYGHAPWLQNFMANIMLRKLDVAWHAPIHGDYVPHSQFLDALVFMTQFVPPRTSTN
Ga0307498_103333661	3300031170	Soil	HTINPDDLAKKGNVKLPKITAIDDTGVLRDPMMTISMYHVRDNSHADSMLMLYFPGGKILTQPDIYMPNDARNVIPGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDYVSNKQFLDSLIFMTQFVPGTKSTN
Ga0310887_105123962	3300031547	Soil	DDEGLLRDSTMTINLYHIRDNSHADSMVMVYFPNGKVLTQPDIYMPNDKRNIIDGEPYGHAPWLQNFMANIMLRKLDVAWHAPIHGDYVPHSQFLDALVFMTQFVPPRSSTN
Ga0310901_100508572	3300031940	Soil	YFPNGKVLTQPDIYMPNDKRNIIDGEPYGHAPWLQNFMANIMLRKLDVAWHAPIHGDYVPHSQFLDALVFMTQFVPPRSSTN
Ga0310895_100934763	3300032122	Soil	MTINMFHIRDNSHADSMLMLYFPNGKIVTQPDIYMPNDARNVIAGEPLGHAPWLQNLAGNINLRKLDVEYHAPIHGDHVTNKQFLDSLIFMTQFLPGSKSTN
Ga0310895_104441852	3300032122	Soil	SMVMVYFPNGKVLTQPDIYMPNDKRNIIDGEPYGHAPWLQNFMANIMLRKLDVAWHAPIHGDYVPHSQFLDALVFMTQFVPPRSSTN
Ga0307471_1016025762	3300032180	Hardwood Forest Soil	KIVTQPDIYMPNDARNVIDGEPLGHAPWLQNLAANIALRKLDVDYHAPIHGDYVTNKQFLDSLIFMTQFVPGSKSTQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097578

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences