Metagenome / Metatranscriptome Family F097557

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097557
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	153 residues
Representative Sequence	MSLALQKLLAPATGCPDRPETGESESRLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVRIYLCRDPLETLAAVLQPHSVVVVGGRRSWWPTAEKRLARKLRRVGHEVIFTESK
Number of Associated Samples	89
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	47.12 %
% of genes near scaffold ends (potentially truncated)	46.15 %
% of genes from short scaffolds (< 2000 bps)	86.54 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.77

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (21.154 % of family members)
Environment Ontology (ENVO)	Unclassified (42.308 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (61.538 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 24.73% β-sheet: 24.73% Coil/Unstructured: 50.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.77
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.77
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SCOP family	SCOP domain	Representative PDB	TM-score
c.26.2.0: Adenine nucleotide alpha hydrolases-like	d3s3ta1	3s3t	0.72
c.26.2.0: Adenine nucleotide alpha hydrolases-like	d3s3ta1	3s3t	0.72
c.26.2.4: Adenine nucleotide alpha hydrolases-like	d1mjha_	1mjh	0.7
c.26.2.0: Adenine nucleotide alpha hydrolases-like	d3hgma_	3hgm	0.7
c.26.2.4: Adenine nucleotide alpha hydrolases-like	d1mjha_	1mjh	0.7
c.26.2.0: Adenine nucleotide alpha hydrolases-like	d3hgma_	3hgm	0.7
c.26.2.0: Adenine nucleotide alpha hydrolases-like	d4wnya1	4wny	0.69
c.26.2.0: Adenine nucleotide alpha hydrolases-like	d4wnya1	4wny	0.69
c.26.2.4: Adenine nucleotide alpha hydrolases-like	d1jmva_	1jmv	0.68
c.26.2.4: Adenine nucleotide alpha hydrolases-like	d1jmva_	1jmv	0.68

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF03814	KdpA	25.96
PF00486	Trans_reg_C	18.27
PF09604	Potass_KdpF	11.54
PF04397	LytTR	1.92
PF02518	HATPase_c	1.92
PF13620	CarboxypepD_reg	0.96
PF00122	E1-E2_ATPase	0.96
PF00543	P-II	0.96
PF00702	Hydrolase	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG2060	K+-transporting ATPase, KdpA subunit	Inorganic ion transport and metabolism [P]	25.96
COG0347	Nitrogen regulatory protein PII	Signal transduction mechanisms [T]	0.96
COG0474	Magnesium-transporting ATPase (P-type)	Inorganic ion transport and metabolism [P]	0.96
COG2216	K+ transport ATPase, ATPase subunit KdpB	Inorganic ion transport and metabolism [P]	0.96
COG2217	Cation-transporting P-type ATPase	Inorganic ion transport and metabolism [P]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	46.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	36.54 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.96 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	46.15 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	46.15 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	10.58 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	46.15 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10.58 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	46.15 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	6.73 %
Streptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	46.15 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	6.73 %
Streptococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	46.15 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	6.73 %
Streptococcus marimammalium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus marimammalium	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120157075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	904	Open in IMG/M
3300004114\|Ga0062593_100092715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2095	Open in IMG/M
3300004157\|Ga0062590_100155996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1573	Open in IMG/M
3300005180\|Ga0066685_10194140	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1392	Open in IMG/M
3300005294\|Ga0065705_11016985	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	543	Open in IMG/M
3300005335\|Ga0070666_11080811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus marimammalium	596	Open in IMG/M
3300005364\|Ga0070673_101650708	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300005365\|Ga0070688_100448582	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	964	Open in IMG/M
3300005434\|Ga0070709_10240750	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300005439\|Ga0070711_100836360	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300005445\|Ga0070708_100009650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7786	Open in IMG/M
3300005450\|Ga0066682_10266343	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1104	Open in IMG/M
3300005451\|Ga0066681_10072658	All Organisms → cellular organisms → Bacteria	1924	Open in IMG/M
3300005456\|Ga0070678_100445623	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1133	Open in IMG/M
3300005467\|Ga0070706_100677974	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	956	Open in IMG/M
3300005468\|Ga0070707_100463878	All Organisms → cellular organisms → Bacteria → Acidobacteria	1228	Open in IMG/M
3300005518\|Ga0070699_100076774	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2908	Open in IMG/M
3300005526\|Ga0073909_10279692	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	751	Open in IMG/M
3300005529\|Ga0070741_10550035	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300005536\|Ga0070697_100819314	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300005547\|Ga0070693_101168600	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	590	Open in IMG/M
3300005547\|Ga0070693_101502614	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300005549\|Ga0070704_100597678	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	969	Open in IMG/M
3300005564\|Ga0070664_101323804	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300005576\|Ga0066708_10549942	All Organisms → cellular organisms → Bacteria → Acidobacteria	743	Open in IMG/M
3300005586\|Ga0066691_10465798	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	755	Open in IMG/M
3300006028\|Ga0070717_11241532	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	678	Open in IMG/M
3300006028\|Ga0070717_12001683	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	522	Open in IMG/M
3300006237\|Ga0097621_100859591	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	843	Open in IMG/M
3300006358\|Ga0068871_100651862	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300006854\|Ga0075425_101905513	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300006903\|Ga0075426_10151374	All Organisms → cellular organisms → Bacteria → Acidobacteria	1674	Open in IMG/M
3300006930\|Ga0079303_10267515	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	699	Open in IMG/M
3300009012\|Ga0066710_100004281	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12577	Open in IMG/M
3300009012\|Ga0066710_100046406	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5317	Open in IMG/M
3300009012\|Ga0066710_104484690	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	522	Open in IMG/M
3300009088\|Ga0099830_10050934	All Organisms → cellular organisms → Bacteria → Acidobacteria	2922	Open in IMG/M
3300009088\|Ga0099830_10140044	All Organisms → cellular organisms → Bacteria	1851	Open in IMG/M
3300009088\|Ga0099830_10260734	All Organisms → cellular organisms → Bacteria → Acidobacteria	1374	Open in IMG/M
3300009089\|Ga0099828_10251331	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1586	Open in IMG/M
3300009089\|Ga0099828_10276947	All Organisms → cellular organisms → Bacteria → Acidobacteria	1507	Open in IMG/M
3300009089\|Ga0099828_10408839	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300009093\|Ga0105240_11595546	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	683	Open in IMG/M
3300009098\|Ga0105245_10761442	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1005	Open in IMG/M
3300009137\|Ga0066709_100088055	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3741	Open in IMG/M
3300009157\|Ga0105092_10797518	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	553	Open in IMG/M
3300009167\|Ga0113563_10523787	All Organisms → cellular organisms → Bacteria	1297	Open in IMG/M
3300009177\|Ga0105248_10722987	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1123	Open in IMG/M
3300009177\|Ga0105248_10760565	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300009177\|Ga0105248_10966662	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	962	Open in IMG/M
3300009177\|Ga0105248_12676171	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	569	Open in IMG/M
3300010337\|Ga0134062_10536961	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	593	Open in IMG/M
3300010371\|Ga0134125_12021609	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	627	Open in IMG/M
3300010396\|Ga0134126_10622470	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1233	Open in IMG/M
3300010400\|Ga0134122_10081075	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2539	Open in IMG/M
3300010403\|Ga0134123_10087567	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2444	Open in IMG/M
3300010403\|Ga0134123_13537891	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	506	Open in IMG/M
3300011269\|Ga0137392_10469697	All Organisms → cellular organisms → Bacteria → Acidobacteria	1045	Open in IMG/M
3300011270\|Ga0137391_10547150	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	975	Open in IMG/M
3300011271\|Ga0137393_11781010	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	504	Open in IMG/M
3300012096\|Ga0137389_11310515	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	618	Open in IMG/M
3300012200\|Ga0137382_10109450	All Organisms → cellular organisms → Bacteria → Acidobacteria	1833	Open in IMG/M
3300012201\|Ga0137365_10322315	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300012209\|Ga0137379_11508955	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	573	Open in IMG/M
3300012212\|Ga0150985_120495861	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300012350\|Ga0137372_10628252	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300012356\|Ga0137371_11233282	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	557	Open in IMG/M
3300012360\|Ga0137375_11390298	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300012469\|Ga0150984_117205012	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300012922\|Ga0137394_10022904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5023	Open in IMG/M
3300012930\|Ga0137407_11570946	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	626	Open in IMG/M
3300012989\|Ga0164305_12207715	All Organisms → cellular organisms → Bacteria → Acidobacteria	507	Open in IMG/M
3300013296\|Ga0157374_10694864	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1030	Open in IMG/M
3300013297\|Ga0157378_10629149	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1087	Open in IMG/M
3300013297\|Ga0157378_12750754	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	544	Open in IMG/M
3300015264\|Ga0137403_10434742	All Organisms → cellular organisms → Bacteria → Acidobacteria	1189	Open in IMG/M
3300015371\|Ga0132258_10841129	All Organisms → cellular organisms → Bacteria	2315	Open in IMG/M
3300015371\|Ga0132258_11573874	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1659	Open in IMG/M
3300015372\|Ga0132256_103620562	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	519	Open in IMG/M
3300015373\|Ga0132257_102184705	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	716	Open in IMG/M
3300018059\|Ga0184615_10494507	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	659	Open in IMG/M
3300018433\|Ga0066667_10181656	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300019487\|Ga0187893_10050383	All Organisms → cellular organisms → Bacteria → Acidobacteria	4231	Open in IMG/M
3300020068\|Ga0184649_1227777	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	797	Open in IMG/M
3300021478\|Ga0210402_11092592	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	725	Open in IMG/M
3300024330\|Ga0137417_1491419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3179	Open in IMG/M
3300025906\|Ga0207699_10202127	All Organisms → cellular organisms → Bacteria → Acidobacteria	1347	Open in IMG/M
3300025910\|Ga0207684_10157397	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300025922\|Ga0207646_10816742	All Organisms → cellular organisms → Bacteria → Acidobacteria	830	Open in IMG/M
3300026088\|Ga0207641_11745120	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	624	Open in IMG/M
3300026121\|Ga0207683_10763580	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	897	Open in IMG/M
3300027821\|Ga0209811_10190101	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	773	Open in IMG/M
3300027875\|Ga0209283_10253631	All Organisms → cellular organisms → Bacteria → Acidobacteria	1166	Open in IMG/M
3300027903\|Ga0209488_10950837	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	599	Open in IMG/M
3300030019\|Ga0311348_11301648	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	540	Open in IMG/M
3300032018\|Ga0315272_10163739	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1050	Open in IMG/M
3300032074\|Ga0308173_11716229	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	591	Open in IMG/M
3300032174\|Ga0307470_10702917	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	771	Open in IMG/M
3300032180\|Ga0307471_100573701	All Organisms → cellular organisms → Bacteria	1285	Open in IMG/M
3300032893\|Ga0335069_10302976	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1902	Open in IMG/M
3300033482\|Ga0316627_100597115	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300033485\|Ga0316626_10092563	All Organisms → cellular organisms → Bacteria	2193	Open in IMG/M
3300033513\|Ga0316628_100673444	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300033513\|Ga0316628_100864751	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1195	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.96%
Host-Associated	Host-Associated	24.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.15%
Plants	Host-Associated → Plants	24.04%
Aquatic	Environmental → Aquatic	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.27%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.38%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.73%
Freshwater	Environmental → Aquatic → Freshwater	3.85%
Roots	Host-Associated → Plants → Roots	1.92%
Sediment	Environmental → Aquatic → Sediment	0.96%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.96%
Peat	Environmental → Terrestrial → Peat	0.96%
Cave	Environmental → Terrestrial → Cave	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.12%
Loam	Environmental → Terrestrial → Soil → Loam	16.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.85%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.92%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.92%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.92%
Lake	Environmental → Aquatic → Freshwater → Lake	0.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.58%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.62%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.92%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.92%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.92%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	21.15%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.88%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.88%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.96%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.96%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.96%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.96%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018059	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019487	White microbial mat communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-4 metaG	Environmental	Open in IMG/M
3300020068	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_65 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300030019	II_Fen_E2 coassembly	Environmental	Open in IMG/M
3300032018	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_middle	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1201570751	3300002568	Soil	MRRRNDVSLAFETILTSAAGMPVTADPVEQRETCLNVTVVFTSIEATLAALREAGLLAWRLDGRITLVVPQIVPYPLPLSSPPVLLEWNERRFRVIANDSPVETRVALYLCRDRVETLCAVLTPCSLVVLGGPRRWWPTAETRLARALRRAGHQVIFKETE*
Ga0062593_1000927152	3300004114	Soil	MGLRNDMLLAFQKPLLPATGSPARPGTGEFESKLNVDVVFTSIEPTLAALKKAGALAGRLNARITLLVPQIVPYPLPLASPPVLLDFNERRFRVIANQSPVETMVRLYLCRDRLETLASVLKPHSVVVVGGRRRWWPTPEKRLAGKLRRAGHEVILAETE*
Ga0062590_1001559961	3300004157	Soil	MLLAFQKPLLPATGSPARPGTGEFESKLNVDVVFTSIEPTLAALKKAGALAGRLNARITLLVPQIVPYPLPLASPPVLLDFNERRFRVIANQSPVETMVRLYLCRDRLETLASVLKPHSVVVVGGRRRWWPTPEKRLAGKLRRAGHEVILAETE*
Ga0066685_101941402	3300005180	Soil	MGARNEMSLALQKLLAPATGCPDRPETHESKYKLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRLIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRSWWPTAEKRLARTLRRVGHEVIFAESE*
Ga0065705_110169852	3300005294	Switchgrass Rhizosphere	FESKLNVDVVFTSIEPTLAALKKAGALAGRLNARITLLVPQIVPYPLPLASPPVLLDFNERRFRVIANQSPVETMVRLYLCRDRLETLASVLKPHSVVVVGGRRRWWPTPEKRLAGKLRRAGHEVILAETE*
Ga0070666_110808111	3300005335	Switchgrass Rhizosphere	MSVTFNHALSTAVGDPDATEAQEQKLNVTVVSTSMDSTVAALKKAGALAESLGARITLVVPQIVPFSLELTSPPVLVEFQERRFREIAAQSPVEVRVNFYLCRDALETLKAVLKPHSLVVLGGPRRFWPTREKALARTLRKAGHEVIFIETE*
Ga0070673_1016507081	3300005364	Switchgrass Rhizosphere	MAQQKSIIPAFERRLASATGSPAPPSAGGSEHRLDVAVVFTSATATVLALKKAGVLAESLSARIALLVPQIVPFPLPLESPPVLIDFSENRFREIAAESLVETTVQIYLCRDRLETLKAVLAPQSLVVIGGRKCWWPTREKTLARQLRRAGHDVVFTETEQEN*
Ga0070688_1004485822	3300005365	Switchgrass Rhizosphere	AGTLAPSTVPDTTLESKLNISVVFTSVENKLEALKRAGELASRSRGHITLVVPQIVPFPLPLTSPPVLIDWNERRFSVIASESQVKTNVMLYLCRDRLETLARVLAPRSLVVVGGRRRWWPTAETRLAWKLRRAGHQVIFAEME*
Ga0070709_102407501	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RLVPETARPAPPLPEAAQHGLEVAVVFTSAPATIAALKKAGALADRLSARITLVVPQVVPYALPLESPPVLVDFSERRFQEIAEGSPVETTVRIYLCRDRREALKSVLAPGSVVVIGGARRWWPTQEKALVRYLCRAGHEVVFAETE*
Ga0070711_1008363601	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MGARYEMSFALQKVLSPATGYPGRPETGESESRLNLDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASQSPVETTVRIYLCRDPLEALTAVLQPHSVVVVGGRRSWWPTAEKRLAGKLRRVGHEVIFTESE*
Ga0070708_1000096503	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGARNEMSLALQKLLAPATGCPDRPETGESESRLNVDVVFTSVEPTLAALKKAGGLASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIAGESPVETTVRIYLCRDPLETLPAVLLPHSVVVVGGRRRWWPTAEERLARKLRRIGHDVIFTEME*
Ga0066682_102663432	3300005450	Soil	MRARNEMSLVLQKLLAPATGCPDRPETHESKYKLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRLIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRSWWPTAEKRLARTLRRVGHEVIFAESE*
Ga0066681_100726582	3300005451	Soil	MGARNEMSLVLQKLLAPATGCPDRPETHESKYKLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRLIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRSWWPTAEKRLARTLRRVGHEVIFAESE*
Ga0070678_1004456232	3300005456	Miscanthus Rhizosphere	MALAFEKHLVAGTLAPSTVPDTTLESKLNISVVFTSVESTLEALKRAGELASRSRGHITLVVPQIVPFPLPLTSPPVLIDWNERRFSVIASESQVKTDVMLYLCRDRLETLARVLAPRSLVVVGGRRRWWPTAETRLAWKLRRAGHQVIFAEME*
Ga0070706_1006779742	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSFRISSKMGMRNEISLAFEKLLATRHPDRPATDEAESRLNIAVVYTSVEATVAALKKAGALAESLGARVTLVVPQVVPYHLPLESPPVLLEFSERRFREIASRSPVETRVHLYLCRDPLDTLMTVLKPRSLVVLGGRKRRWPTSEKSLARKLRRAGHEVVFTETG*
Ga0070707_1004638782	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VVFTSAAPTIAALKKAGALADRLSARINLVVPQIVPYPLPLDSPPVLIDFGEQWFREIATESPVETTVQIYLCRDRLETLTSVLARRSLVVIGGRKHWWPTQEKSLARQLRRAGHEVVFTETE*
Ga0070699_1000767742	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSLALQKPLAPATGAPARPGTGKFESKLSVDVVFTSIEPTLAALKKAGALAGGLNARITLLVAQIVPYPLPLESPPVLLDFNERRFRKIANQSPVETTVRLYLCRDQLETLASVLEPHSVVVVGGRKRWWPTPEKRLAGKLRRAGHEVIFAETE*
Ga0073909_102796922	3300005526	Surface Soil	TGYPDRPETGESESRLNLDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIAGESPVETTVHIYLCRDPLETLPGVLQPHSVVVLGGRRSWWPTAEQRLARKLRRVGHKVIFTESE*
Ga0070741_105500351	3300005529	Surface Soil	MALAFERRLIPHTTRPIEPARHDAEHQLEITVVFTSAPATTAALKKAGALASKLRAHVTVVVPQIVPHPLPLESPPVLLDFSERRFAEIAKASPVDTMVRLYLCRDPLETIKAALRPHSLVVIGGRWRWWPTPEKRLARKLRREGHEVIFTESE*
Ga0070697_1008193141	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MALAFQKLLVPANRQPAPSQRAESENRLEIAVVFTFATPTIAALKKAGALADRLSARINLVVPQIVPYPLPLESPPVLLDFGEQRFREIATESPVETTVQIYLCRDRLETLTSVLAPRSLVVIGGRKRWWPTQEKSLARKLRRAGHDVIFTEME*
Ga0070693_1011686001	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTLALQKVLAPAAGESESRLNLDVVFTSVEPTLAALKKAGDLASRLNARITLVVPQIVPYPLPLKTPPVLIEFNERRFRVIASQCPVAMTVHIYLCRDPAETLAAVLKLDSIVILAVVEGGGQQPRSACPGNCAAWVMKSFLRKRSKGEC*
Ga0070693_1015026141	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	GLRNDMSLALQKPLAPATGAPARPGTGKFESKLSVDVVFTSIEPTLAALKKAGALAGRLNARITLLVAQIVPYPLPLESPPVLLDFNERRFRKIANQSPVETTVRLYLCRDQLETLASVLEPHSVVVVGGRKRWWPTPEKRLAGKLRRAGHEVIFAETE*
Ga0070704_1005976782	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	ARPGTGKFESKLSVDVVFTSIEPTLAALKKAGALAGGLNARITLLVAQIVPYPLPLESPPVLLDFNERRFRKIANQSPVETTVRLYQCRDQLETLASVLEPHSVVVVGGRKRWWPTPEKRLAGKLRRAGHEVIFAETE*
Ga0070664_1013238043	3300005564	Corn Rhizosphere	SGHRLDVAVLFTSAASTVLALRKAGALAESLGARITLLVTQIVPYPLPLESPPVLIDFGENRFREIATLGAVETTVQIYLCRDRLETLESVLAPHSLVVIGGARRWWPTREESLARQLRRTGHDVVFAETE*
Ga0066708_105499421	3300005576	Soil	MTDEKDMTPAFERRLAPATGRPAPPPASESRHRLDVAVLFTSAAATVLALRKAGVLAESLGARITLLVPQIVPYPLPLDSPPVLIDFSEKRFREIAEASAVDTTVQIYLCRDRLETLKAVLAPRSLVVLGGARRWWPTREKSLARQLRRAGHEVVFAETE*
Ga0066691_104657981	3300005586	Soil	MSLVLQKLLAPATGCPDRPETHESKYKLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRLIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRSWWPTAEKRL
Ga0070717_112415321	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MSLALQKVLAPATGCPDRPKSGESESRLNVDVVFTSVEPTLAALRKAGELANRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASQSPVETTVRIYLCRDPLDALTAVLQPHSVVVLGGRRSWWPTAEKRLARKLRCVGHQVIFTESE*
Ga0070717_120016831	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	RLPSDMGARNEMSLALQKLLAPATGCPDRVENGEYESRLNVDVVFTSVEPTLAALKKAGALASRLNGRVTLVVPQIVPYPLPLKTPPVLIDFNERRFRIIASESPVETTVRIYLCRDPLEALTAVLQPHSVVVVGGRRSWWPTAEKRLAGKLRRVGHEVIFTESE*
Ga0097621_1008595913	3300006237	Miscanthus Rhizosphere	MALAFEKHLVAGTLAPSTVPDTTLESKLNISVVFTSVESTLEALKRAGELASRSRGHITLVVPQIVPFPLPLTSPPVLIDWNERRFSVIASESQVKTNVMLYLCRDRLETLARVLAPRSLVVVGGRRRWWPTAETRLAWKLRRAGHQVIFAEME*
Ga0068871_1006518622	3300006358	Miscanthus Rhizosphere	MTLALQKVLAPAAGESESRLNLDVVFTSVEPTLAALKKAGDLASRLNARITLVVPQIVPYPLPLKTPPVLIEFNERRFRVIASQCPVAMTVHIYLCRDPAETLAAVLKPDSIVILGGRRRWWPTAEKRLSRKLRRVGHEVIFTETE*
Ga0075425_1019055131	3300006854	Populus Rhizosphere	MALAFQKLLVPATGRPTPLRHDESGHRLEVAVVFTSATPTVAALKKAGALVDKLSARISMVVPQIVPFPLPLESPPVLLDFSERRFREVALESPVETTVQIYLCRDRLETLKSVLAPHSLVVIGGRKRWWPTQEKRLARQLRRAGHEVIFTETE*
Ga0075426_101513741	3300006903	Populus Rhizosphere	MLFAMEKILVPATGQPEQRTAAETESRLEISVVFTTVDATLAALKDAGGLAKTLNGRITLLVPQAVPFPLPLESPPVLIEFNEKRFREIASQSPVETAVQIYLCRDPIGTLINVLKPGSVVVVGGRKRWWPTREKSLAHKLRKAGHEVVFKETE*
Ga0079303_102675153	3300006930	Deep Subsurface	MAIALERHLTPATGRPGSPEVGREDSPLEIAVVFTSVESTLAALKHAGALAHRLAGRITLLVPQIVPYSLPLSTPPVLIDWNERRFRIIAETSQVDTRVHLYLCRDRDETLKRVLGPRSLVVLGGPRRWWRLTAEKRLARKLRRSGREVVFVETE*
Ga0066710_1000042819	3300009012	Grasslands Soil	MSLALQKLLAPATGCPDRPETYESEYKLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRLIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRSWWPTAEKRLARTLRRVGHEVIFAESE
Ga0066710_1000464066	3300009012	Grasslands Soil	MVKQKSISLVFQRRLTPATGRIAPPLREDSDSRLEVAVVFTSAAATIAALRKAGALADSLSARVTLVVPQIVPYPLPLESPPVLLDFSEHRFREIAKESPVETTVRIFLCRDKVETLKSVLAPQSLVVIGGQRHWWPTREKGLARQLRRAGHEVVFTEME
Ga0066710_1044846901	3300009012	Grasslands Soil	PGTGESQSGLNIDVAFTSVDPTLAALKKAGALASRLNARITLLVPQIVPYPLPLESPPVLIEFNERRFRIIASESPVETTVRIYLCRNQLETLAAVLKPHSVVVLGGRRRWWPTAEKRLARKLRRVGHEVILTETE
Ga0099830_100509343	3300009088	Vadose Zone Soil	MGARNEMSLALQKLLAPATGCPDRPETGESESRLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVHIFLCRDPLETLPGVLQPHSVVVLGGRRSWWPTAEQRLARKLRRVGHEVILTESE*
Ga0099830_101400442	3300009088	Vadose Zone Soil	MTLAFQKLLVPATGHPAPAQRDESKHQLEVAVVFTSAAQTIAALKKAGALADRLSARINLVVPQIVPYPLPLESPPVLIDFGERWFREIATESPVETTVQIYLCRDRLETLTSVLAPRTLVVIGGRKRWWPTQEKSLARQLRRAGHEVIFTETE*
Ga0099830_102607342	3300009088	Vadose Zone Soil	MGERKEPSPAFEKLLSPATGRPERPAIEEAESRLNIAVVFTSAEATIAAMKRAGALAEQLNARITLVAPQIVPWPLPLDSPPVLLDFSEKRFGDIADQSPVDITVRLYLCRDRLEVLRAVLAPHSLVVVGGRKRWWPTPEKHLASSLRRDGHEVIFAEME*
Ga0099828_102513313	3300009089	Vadose Zone Soil	MGERKEPSPALEKLLSPATGLPERPAIEEAESRLNIAVVFTSAEATIAAMKRAGALAEQLNARITLVVAQIVPWPLPLDSPPVLLDFSEKRFRDIADQSPVDITVRLYLCRDRLEVLRAVLAPHSLVVVGGRKRWWPTPEKHLASSLRRDGHEVIFAEME*
Ga0099828_102769472	3300009089	Vadose Zone Soil	MTLAFQKLLVPATGHPAPAQRDESKHQLEVAVVFTSAAPTIAALKKAGALADRLSARINLVVPQIVPYPLPLDSPPVLIDFGEQWFREIATESPVETTVQIYLCRDRLETLTSVLAPRTLVVIGGRKRWWPTQEKSLARQLRRAGHEVIFTETE*
Ga0099828_104088392	3300009089	Vadose Zone Soil	MSLALQKLLAPATGCPDRPETGESESRLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVRIYLCRDPLETLAAVLQPHSVVVVGGRRSWWPTAEKRLARKLRRVGHEVIFTESK*
Ga0105240_115955462	3300009093	Corn Rhizosphere	MTLAVQKVLAPAAGESESRLNLDVVFTTLEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVEMTVHIYLCRDQLETLAAVLEPHSVVVLGGRRRWWPTAEKRLARKLRRVGHEVIFAESE*
Ga0105245_107614421	3300009098	Miscanthus Rhizosphere	MTLALQKVLAPAAGESESRLYLNVVFTSVEPTLAALKKAGDLASRLNARITLVVPQIVPYPLPLKTPPVLIEFNERRFCVIASQCPVAMTVRIYLCRDPAETLAAVLEPDSIVILGGRRRLWATADKRLARKLRRVGHEVIFTETE*
Ga0066709_1000880552	3300009137	Grasslands Soil	MSLVLQKLLAPATGCPDRPETHESKYKLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRLIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRSWWPTAEKRLARTLRRVGHEVIFAESE*
Ga0105092_107975181	3300009157	Freshwater Sediment	PLRIPSIVGATNEMSLALQRTLATLPGYPAHPAVDETESRLNVAVVFTSVESTLAALRKAGALAKRLRGRITLLVPQVVPHPLPLSSPPVLLDWNENRFRVIASESAVETTVLIYLCRDRLDALTTVLSPRSLVVVGGPRRWWPTAEKRLARKLRRAGHEVIFTETE*
Ga0113563_105237872	3300009167	Freshwater Wetlands	MAIALERHLTPATGRPGSPEVGREDSPLEIAVVFTSVESTLATLKHAGALAHRLAGRITLLVPQIVPYSLPLSTPPVLIDWNERRFRIIAETSQVDTRVHLYLCRDRDETLKRVLGPRSLVVLGGPRRWWRLTAEKRLARKLRRSGREVVFVETE*
Ga0105248_107229872	3300009177	Switchgrass Rhizosphere	MALAFEKHLVAGTLAPSTVPDTTLESKLNISVVFTSVESTLEALKRAGELASRSRGHITLVVPQIVPFPLPLTSPPVLIDWNERRFSVIASESQVKTDVMLYLCRDRSETLARVLAPRSLVVVGGRRRWWPTAETRLAWKLRRAGHQVIFAEME*
Ga0105248_107605652	3300009177	Switchgrass Rhizosphere	VEGEDDMSVTFNHALSTAVGDPDATEAQEQKLNVTVVSTSMDSTVAALKKAGALAESLGARITLVVPQIVPFSLELTSPPVLVEFQERRFREIAAQSPVEVRVNFYLCRDALETLKAVLKPHSLVVLGGPRRFWPTREKALARTLRKAGHEVIFIETE*
Ga0105248_109666621	3300009177	Switchgrass Rhizosphere	GVRKATGPGNRPPGGAAGERVPAYRLDVAVLFTSATATVVALRKASVLAESLGARITLLVPQIVPYPLPLDSPPVLIDFSEKRFREIAEASAVDTMVQIYLCRDRLETLKAVLAPRSLVVLGGARRWWPTREKSLARQLRRAGHEVVFAETE*
Ga0105248_126761711	3300009177	Switchgrass Rhizosphere	KSSRLFHAFFRLYFLPSNCKVTMEAQQEKTLAFQGRLGPETTRPIPPQGERSEHRLDVTVVFTSIEATITALRKAGALADSLGARVTLVVPQVVPYPRPLESPPVLLDFSERRLREIATESAVETTVQIYLCRDPLEMLRTALAGRSLVIVGGRRRWWPTQEKRLMRQLRRAGHQVVFAEME*
Ga0134062_105369611	3300010337	Grasslands Soil	ATGCPDRPETHESKYKLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRSWWPTAEKRLARTLRRVGHEVIFAESE*
Ga0134125_120216091	3300010371	Terrestrial Soil	SESRLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVHIYLCRDPLETLPAVLQPHSVVVLGGRRRWWPTAEQRLARKLQRMGHKVIFTESE*
Ga0134126_106224702	3300010396	Terrestrial Soil	MAALPEQSLGPDPSQDKPEITVVFTSFISTRAALKRAGKLARRLAGRITLLVPQIVPYPLQLTSPPIPINWNERRFRAFAESSQVDATVHLYLCRDRDETLKTVLSRHSTVIIGELRKQWWFTPEKRLARKLLRAGHEVVLIETE*
Ga0134122_100810752	3300010400	Terrestrial Soil	MGLRNDMSLALQKPLAPATGAPARPGTGKFESKLSVDVVFTSIEPTLAALKKAGALAGGLNARITLLVAQIVPYPLPLESPPVLLDFNERRFRKIANQSPVETTVRLYQCRDQLETLASVLEPHSVVVVGGRKRWWPTPEKRLAGKLRRAGHEVIFAETE*
Ga0134123_100875673	3300010403	Terrestrial Soil	MGLRNDMSLALQKPLAPATGAPARPGTGKFESKLSVDVVFTSIEPTLAALKKAGALAGRLNARITLLVAQIVPYPLPLESPPVLLDFNERRFRKIANQSPVETTVRLYLCRDQLETLASVLEPHSVVVVGGRKRWWPTPEKRLAGKLRRAGHEVIFAETE*
Ga0134123_135378911	3300010403	Terrestrial Soil	MTLALQKVLAPAAGESESRLNLDVVFTSVEPTLAALKKAGDLASRLNARITLVVPQIVPYPLPLKTPPVLIEFNERRFRVIASQCPVAMTVHIYLCRDPAETLAAVLKLDSIVILGGRRRWWPTAEKRLARKLRRVGHEVIFTE
Ga0137392_104696973	3300011269	Vadose Zone Soil	MTLAFQKLLVPATGHPAPAQRDESKHQLEVAVVFTSAAQTIAALKKAGALADRLSARINLVVPQIVPYPLPLDSPPVLIDFGEQWFREIATESPVETTVQIYLCRDRLETLTSVLAPRTLVVIGGRKRWWPTQEKSLARQLRRAGHEVIFTETE*
Ga0137391_105471501	3300011270	Vadose Zone Soil	MSLALQKLLAPATGCPDRPETGESESRLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETAVRIYLCRDPLEALAAVLQPHSVVVLGGRRSWWPTAEKRLARTLRRVGHEVIFA
Ga0137393_117810101	3300011271	Vadose Zone Soil	DESKHQLEVAVVFTSAAQTIAALKKAGALADRLSARINLVVPQIVPYPLPLESPPVLIDFGERWFREIATESPVETTVQIYLCRDRLETLTSVLAPRTLVVIGGRKRWWPTQEKSLARQLRRAGHEVIFTETE*
Ga0137389_113105151	3300012096	Vadose Zone Soil	PSDMGARNEMSLALQKLLAPAAGGPDRPETGESDCRLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYQLPLKTPPVLIEFNERRFRIIASESPVETTVRIYLCRDPLETLPGVLQPHSVVVLGGRRSWWPTAEQRLARKLRRVGHEVILTESE*
Ga0137382_101094502	3300012200	Vadose Zone Soil	MSLVLQKLLAPATGCPDRPETHESKYKLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRRLWTTTEQRLARKLQRVGHKVIFTESE*
Ga0137365_103223152	3300012201	Vadose Zone Soil	LELAVVFTSAAATIAALKKAAALADRLGARITLVVPQIVPYPLPIESPPVLLDFSESRCREIAIESPVETTVRIYLCRNRLEMLKSVLMPRSLVVVGGRKRWWPTHEKSLARQLRGAGHEVIFTETE*
Ga0137379_115089552	3300012209	Vadose Zone Soil	MTLALQKVLDPAAGFPDRPETGESESRLNLDVVFTSVAPTLVALKKAGALASRLNGRITLVVPQILPYPLPLKTPPVLIEFNERRFRIIASESRVETTVRIYLCRDPSETLAEVLKPRSIVLLGGRRRWWPTAEKRLARK
Ga0150985_1204958611	3300012212	Avena Fatua Rhizosphere	MTDEKDMTPAFKRRLAPATGRPAPPPASESRHRLDVAVLFTSAAATVLALRKASMLAERLGARITLLVPQIVPYPLPLDSPPVLIDFSEKRFREIAEASAVDTTVQIYLCRDRLETLKAVLAPRSLVVLGGARRWWPTREKSLALQLRRAGQEVVNVQRVPIVVGHPG
Ga0137372_106282523	3300012350	Vadose Zone Soil	VEKILVPAPGYPARPRAEEAQRLSIAVISTSIESTIAAMKKAGAFASSLGARITLVVPQVVPHPLPLESPPVLVEFNENRYRAIAGECPVETTVRIYLCRDRLETLKLVLHAGCLVVIGGRRHWWPTQEKSLARQLRRAGHEVIFTETE*
Ga0137371_112332821	3300012356	Vadose Zone Soil	APGYPARPSAEEAQRLSIAVISTSIESTIAAMKKAGAFASSLGARITLVVPQVVPHPLPLESPPVLVEFNENRYRAIAGECPVETTVRIYLCRDRLEMLKVLLRPGSLVVLGGRKHWWPTQEKSLARQLRRAGHEVIFTETE*
Ga0137375_113902981	3300012360	Vadose Zone Soil	PATGRPAPTPADESEHRLDVAVVYTSAAATVLALRKAGALAESLSARITLLVPQIVPYPLPLESPPVLLDFSEQRFREIAAESPVETSVHIYLCRDRLETLKTVLAARSLVVIGSAKRWWPTREKSLARQLRRAGHEVIFAETE*
Ga0150984_1172050121	3300012469	Avena Fatua Rhizosphere	MTDEKDMTPAFERRLAPATGRPAPPPASESRHRLDVAVLFTSAAATVLALRKASMLAERLGARITLLVPQIVPYPLPLDSPPVLIDFSEKRFREIAEASAVDTTVQIYLCRDRLETLKAVLAPRSLVVLGGARRWWPTREKSLARQLRRAGHEVVFAE
Ga0137394_100229044	3300012922	Vadose Zone Soil	MSLALQKVLAPATGCPDRPETGESESRLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRRWWPTAEQRLARKLQRVGHKVIFTESE*
Ga0137407_115709462	3300012930	Vadose Zone Soil	MGARNEMSLALQKLLAPATGCPDRPETGESESRLNVDVVFTSVEPTLTALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRRWWPTAEQRLA
Ga0164305_122077151	3300012989	Soil	LFHAFFRLYFLPSNCKVTMEAQQEKTLAFQGRLGPETTRPIPPQGERSEHRLDVTVVFTSIEATITALRKAGALADSLGARVTLVVPQVVPYPRPLESPPVLLDFSERRLREIATESAVETTVQIYLCRDPLEMLRTALAGRSLVIVGGRRRWWPTQEKRLMRQLRRA
Ga0157374_106948642	3300013296	Miscanthus Rhizosphere	MTLALQKVLAPAAGESESRLNLDVVFTSVEPTLAALKKAGDLASRLNARITLVVPQIVPYPLPLKTPPVLIEFNERRFRVIASQCPVAMTVRIYLCRDPAETLAAVLEPDSIVILGGRRRWWPTAEKRLSRKLRRVGHEVIFTETE*
Ga0157378_106291493	3300013297	Miscanthus Rhizosphere	MTLALQKVLAPAAGESESRLNLNVVFTSVEPTLAALKKAGDLASRLNARITLVVPQIVPYPLPLKTPPVLIEFNERRFRVIASQCPVAMTVHIYLCRDPAETLAAVLKLDSIVILGGRRRWWPTAEKRLSRKLRRVGHEVIFTE
Ga0157378_127507541	3300013297	Miscanthus Rhizosphere	LQKVLSPATGYPGRPETGESESRLNLDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIAGESPVETTVHIYLCRDPLETLPGVLQPHSVVVLGGRRRWWPTAEQRLARKLQRVGHKVIFTESD*
Ga0137403_104347422	3300015264	Vadose Zone Soil	VQSRIQRVFEEPVVRESTGRLNINVVFTSVNATLAALKAAGALANHLAAHITLVVLQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRRWWPTAEQRLARKLQRVGHKVIFTESE*
Ga0132258_108411292	3300015371	Arabidopsis Rhizosphere	DESEHRLDVAVVFTSASATIEALKHAGALADRLSGRITLLVPQIVPYPLPLECPPVLLDFSERHFREIAAASPVETTVQIYLCRDPLVTLRSVLRTGSLVVIGGRRRWWPTSEQRLARQLRRAGHEVVFAETE*
Ga0132258_115738742	3300015371	Arabidopsis Rhizosphere	MEVGNNMRLAFEKLVVPAIRRRKPAQADVPEHRLNMAVVFTSTAATVTALKKAGALAESLSARITLVVPQIVPFPLPLESPPVLLEFSERRFRQIAEDSPVETTVQIYLCRDRNETLRAVLAPRSLVVVGGRRRWWHTAEQRLARQLRRAGHEVIFTETE*
Ga0132256_1036205621	3300015372	Arabidopsis Rhizosphere	ALERLLAPAAVRPETSADETDAGLHVTVVFTSVDTTLTALKKAGALASRLDARITLVIPQIVPYPLPLHSPPVLLEFQERRFRKIAAESPVDIRIQLYLCRDETETLRKVLRERSIVVIGGRERWWPTREQRLARKLRSSGHDVILTGAK*
Ga0132257_1021847051	3300015373	Arabidopsis Rhizosphere	MEVGNNMRLAFEKLVVPAIRRRKPAQADVPEHRLNMAVVFTSTAATVTALKKAGALAESLSARITLVVPQIVPFPLPLESPPVLLEFSERRFRQIAEDSPVETTVQIYLCRDRNETLRAVLAPRSLVVVGGRRRWWHTAEQRLARQLRRAGHEVIFT
Ga0184615_104945071	3300018059	Groundwater Sediment	TIQSQRLRIFINSSWLFHDFFRSFPVRSVMGAKNDDMALAFERVLAPSVGHPATPAIEETKSRLNVAVVFTSVYATLAALRKAGALANRLSGRITLVVPQLVPYPLPLTSPPVLLEWNEKRFRVIASESPVETAVVIYLCRDRVETLITVLSPRSIVVIGRRKRWWATAEQRLARRLRRAGHEVILTETE
Ga0066667_101816562	3300018433	Grasslands Soil	MGARNEMSLVLQKLLAPATGCPDRPETHESKYKLNVDVVFTSVDPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRLIASESPVETTVRIYLCRDPLETLPAVLQPHSVVVLGGRRSWWPTAEKRLARTLRRVGHEVIFTESE
Ga0187893_100503832	3300019487	Microbial Mat On Rocks	MYFAHRIFITSLCLFYDFFRPFPVCSNRKTRNEMSLAFERILAPAPGYPAQPTPAEGSEPRLNVAVVFTSVDATLAALRKAGALASRLSGCITLLVPQIVPYPLPLTSPPVLLDWNERRFRVIAGESPVETRVLLYLCRDRLDTLTAVLSPRSLVVVGGRKRRWWPTMEKRLARKLRRSGHEVIFTETE
Ga0184649_12277771	3300020068	Groundwater Sediment	QIVSSRVATRVERSRVQAPVSRLDVVVVFTSIESTLAALKKAGALADRLNGRITLVVPQVVPYHLALTSPPVLLDWNEKRFRVITSESRVETTVVIYLCRDRMDMLATVLPPRSLVVVGGRKRWWPTAEKRLASHLRRAGHEVIFTETE
Ga0210402_110925922	3300021478	Soil	ALQKVLSPAIGYPDRPEARESEFRLNLDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLRTPPVLIEFNEKRFRIIAGESPVETTVRIYLCREPLETLAAVLQPHSLVVLGGHRSWWPTAENRLARKLRRAGHEVIFTETG
Ga0137417_14914194	3300024330	Vadose Zone Soil	MSFALQKVLAPAVGYPNHPEAGESESRLNLDVVFTSVEPTLAALKEAGALACRLNARITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIAGESPVETTVRIYLCRDPLETLAAVLQPHSVVVLGGRKSWWPTAEERLARKLRRVGHEVIFYGNGVKPNARFILRRCRLPGSARFLGLRES
Ga0207699_102021272	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	KDSSLVFQRRLVPETARPAPPLPEAAQHGLEVAVVFTSAPATIAALKKAGALADRLSARITLVVPQVVPYALPLESPPVLVDFSERRFQEIAEGSPVETTVRIYLCRDRREALKSVLAPGSVVVIGGARRWWPTQEKALVRYLCRAGHEVVFAETE
Ga0207684_101573973	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSFRISSKMGMRNEISLAFEKLLATRHPDRPATDEAESRLNIAVVYTSVEATVAALKKAGALAESLGARVTLVVPQVVPYHLPLESPPVLLEFSERRFREIASRSPVETRVHLYLCRDPLDTLMTVLKPRSLVVLGGRKRRWPTSEKSLARKLRRAGHEVVFTETG
Ga0207646_108167423	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AVVFTSAAPTIAALKKAGALADRLSARINLVVPQIVPYPLPLDSPPVLIDFGEQWFREIATESPVETTVQIYLCRDRLETLTSVLARRSLVVIGGRKHWWPTQEKSLARQLRRAGHEVVFTETE
Ga0207641_117451201	3300026088	Switchgrass Rhizosphere	MALAFEKHLVAGTLAPSTVPDTTLESKLNISVVFTSVESTLEALKRAGELASRSRGHITLVVPQIVPFPLPLTSPPVLIDWNERRFSVIASESPVETKVMLYLCRDRLETLVRVLAPHSLVVIGGRRRWWPTAETRLARTLRRAGH
Ga0207683_107635801	3300026121	Miscanthus Rhizosphere	MALAFEKHLVAGTLAPSTVPDTTLESKLNISVVFTSVESTLEALKRAGELASRSRGHITLVVPQIVPFPLPLTSPPVLIDWNERRFSVIASESQVKTDVMLYLCRDRLETLARVLAPRSLVVVGGRRRWWPTAETRLAWKLRRAGHQVIFAEME
Ga0209811_101901012	3300027821	Surface Soil	LQKVLAPATGYPDRPETGESESRLNLDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIAGESPVETTVHIYLCRDPLETLPGVLQPHSVVVLGGRRSWWPTAEQRLARKLRRVGHKVIFTESE
Ga0209283_102536312	3300027875	Vadose Zone Soil	MSLALQKLLAPATGCPDRPETGESESRLNVDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVRIYLCRDPLETLAAVLQPHSVVVVGGRRSWWPTAEKRLARKLRRVGHEVIFTESK
Ga0209488_109508371	3300027903	Vadose Zone Soil	DVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIASESPVETTVCIYLCRDPLETLPTVLQPHSVVVLGGRRSWWPTAEQRLARKLRRVGHKVIFTESE
Ga0311348_113016481	3300030019	Fen	SVLTPQMGPRRRPPRPVEHLLVFMKSSWLFYDFFRPFRVRSIVGAKNDMSLALERVLAPAPGFPGPPAIGETESRLNVAVIFTSVQSTLAALKKAGALANRLSGRITLVVPQIVPYPLPLTSPPVLLDWNEKRFRVIAGESPVETTVQIYLCRDRLETLTAVLSPRSLVVVGGPKRWWPT
Ga0315272_101637392	3300032018	Sediment	MSLAYERCLAAKTDAPEAEAGIGIDVVFTTVEATLAALRKAGDLASRLNARIHLVVAQVVPYPTPLASPPVLVDFNERRFHAIAGESSVETTVLVYLCRDSWQVLSTVLRPHSLVVVGGRRRWWPTAEERLARRLRRSKHEVIFTETE
Ga0308173_117162291	3300032074	Soil	MRLAFEERLIPAAGRPAPPPAQDPEHRLDVAVVFTSAAATVLALKTAGALADRLSARISLLVPQIVPYPRPLESPAVLIDFSENQSREIAAESMVETKVQVYLCRDRLETLKAVLAPHSIVFIGGRKRWW
Ga0307470_107029172	3300032174	Hardwood Forest Soil	MSFALQKVLAPEAGYPDRPETGESESRLNLDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIAGESPVETTVHIYLCRDPLETLPAVLHPHSVVVLGGRRRWWPTAEQRLARKLQRVGHKVIFTESE
Ga0307471_1005737011	3300032180	Hardwood Forest Soil	MSFALQKVLAPAAGYPDSSETGESESRLNLDVVFTSVEPTLAALKKAGALASRLNGRITLVVPQIVPYPLPLKTPPVLIEFNERRFRIIAGESPVETTVHIYLCRDPLETLPAVLHPHSVVVLGGRRRWWPTAEQRLARKLQRVGHKVIFTESE
Ga0335069_103029762	3300032893	Soil	VLPVLEKLLSPSAASPQNAATHHTDSELRVSVVFTQIEPTLEALREAGKLASRFNASLTLVVAQIVPYPLPLSSPPILLGFNERRFRVVAGQSSVATTVRIYLCRDREEMLKDVLAPHSLVVMGGRKRWWPTAETRLAWTLRRAGHEVVLVQQ
Ga0316627_1005971153	3300033482	Soil	HLTPATGRPGSPEVGREDSPLEIAVVFTSVESTLAALKHAGALAHRLAGRITLLVPQIVPYSLPLSTPPVLIDWNERRFRIIAETSQVDTRVHLYLCRDRDETLKRVLGPRSLVVLGGPRRWWRLTAEKRLARKLRRSGREVVFVETE
Ga0316626_100925631	3300033485	Soil	MAIALERHLTPATGRPGSPEVGREDSPLEIAVVFTSVESTLAALKHAGALAHRLAGRITLLVPQIVPYSLPLSTPPVLIDWNERRFRIIAETSQVDTRVHLYLCRDRDETLKRVLGPRSLVVLGGPRRWWRLTAEKRLARKLRRSGREVVFVETE
Ga0316628_1006734443	3300033513	Soil	KNEMSLAFERVLTPSPGFPAPPAIEDMESRLNVAVVFTSVEATLTALREAGALANRLSGRITLLVPQLVPYPLPLTSPPVLLDWNEKRFRVIASESPVETTVLIYLCRNRLETLTAVLSPRSLVVVGGRKRWWPTAEKRLARKLRRAGHEVLFTETE
Ga0316628_1008647513	3300033513	Soil	MALAFERPLAPSTSLPQQPRGERDDNKLEVSVVFTGSGPTLPALQEAGVLAGRLAAEVTLIVPQIVPYPLPLTSPPVLLDFNERRFFLIASESKVETTVRIYLCRDRWDALRSILKPHSLVVIGGRKRWWPTPEKRLAQRLRRAGHQVTVVEME

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097557

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences