Metagenome / Metatranscriptome Family F097519

Basic Information
Family ID	F097519
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	46 residues
Representative Sequence	ESYFPNQTKQDENVEQESDVSSDGEEVSEPKLNNIMEAYSKAIARK
Number of Associated Samples	92
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.24

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (48.077 % of family members)
Environment Ontology (ENVO)	Unclassified (86.538 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (69.231 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.86% β-sheet: 0.00% Coil/Unstructured: 85.14%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF07068	Gp23	88.46
PF06841	Phage_T4_gp19	1.92
PF11056	UvsY	0.96
PF13476	AAA_23	0.96

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	65.38%
Unclassified	Environmental → Aquatic → Marine → Unclassified	17.31%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.69%
Volcanic	Environmental → Aquatic → Marine → Volcanic	3.85%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	2.88%
Inlet	Environmental → Aquatic → Marine → Inlet	1.92%
Coastal	Environmental → Aquatic → Marine → Coastal	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	59.62%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	17.31%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	5.77%
Aphotic Zone	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone	4.81%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	3.85%
Unclassified	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.92%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.92%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	0.96%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	48.08%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	9.62%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	6.73%
Marine	Environmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine	4.81%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	2.88%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	2.88%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.88%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	2.88%
Hydrothermal Vent Plume	Environmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Plume	2.88%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	2.88%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	1.92%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.92%
Marine Oceanic	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic	1.92%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.92%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	0.96%
Marine	Environmental → Aquatic → Marine → Inlet → Unclassified → Marine	0.96%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.96%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	0.96%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.96%
Volcanic Co2 Seeps	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seeps	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001781	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Deep Sites	Environmental	Open in IMG/M
3300001783	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Vondamm Sites	Environmental	Open in IMG/M
3300001845	Hydrothermal vent plume microbial communities from the Mid Cayman Rise - Shallow Sites - lt1kb	Environmental	Open in IMG/M
3300001972	Marine microbial communities from the Sargasso Sea - GS000d	Environmental	Open in IMG/M
3300002776	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - MetaT SI072_150m_B (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005399	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F14-07SV275	Environmental	Open in IMG/M
3300005508	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV259	Environmental	Open in IMG/M
3300005596	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B	Environmental	Open in IMG/M
3300005969	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_Bottom_ad_4513_LV_A	Environmental	Open in IMG/M
3300006011	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_O2min_ad_340m_LV	Environmental	Open in IMG/M
3300006090	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124	Environmental	Open in IMG/M
3300006093	Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP189	Environmental	Open in IMG/M
3300006304	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_1_1000m	Environmental	Open in IMG/M
3300006310	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500m	Environmental	Open in IMG/M
3300006326	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0770m	Environmental	Open in IMG/M
3300006336	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT238_2_0500m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006738	Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006753	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG	Environmental	Open in IMG/M
3300006754	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG	Environmental	Open in IMG/M
3300006789	Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG	Environmental	Open in IMG/M
3300006900	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_Bottom_ad_5009_LV_A	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006926	Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaG	Environmental	Open in IMG/M
3300007152	Seawater microbiome, Papua New Guinea CO2 seep, Dobu 'bubble', waterEBds3	Environmental	Open in IMG/M
3300007330	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S7 250_A metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300008221	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_66	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009370	Combined Assembly of Gp0127930, Gp0127931	Environmental	Open in IMG/M
3300009409	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009613	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3737_250	Environmental	Open in IMG/M
3300009619	Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250	Environmental	Open in IMG/M
3300009785	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300011013	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaG	Environmental	Open in IMG/M
3300011312	Marine microbial communities from the Deep Pacific Ocean - MP2100 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011322	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S12 250_B metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011328	Marine microbial communities from the Southern Atlantic ocean - KN S17 250_B metaT (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020271	Marine microbial communities from Tara Oceans - TARA_B100000678 (ERX556013-ERR599096)	Environmental	Open in IMG/M
3300020353	Marine microbial communities from Tara Oceans - TARA_B100000686 (ERX556093-ERR598998)	Environmental	Open in IMG/M
3300020400	Marine microbial communities from Tara Oceans - TARA_B100001115 (ERX555947-ERR598992)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020468	Marine microbial communities from Tara Oceans - TARA_A100000164 (ERX555914-ERR598993)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300021345	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021359	Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 12015 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300025029	Marine viral communities from the Pacific Ocean - LP-39 (SPAdes)	Environmental	Open in IMG/M
3300025096	Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaG (SPAdes)	Environmental	Open in IMG/M
3300025109	Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)	Environmental	Open in IMG/M
3300025118	Marine viral communities from the Subarctic Pacific Ocean - 10_ETSP_OMZ_AT15264 metaG (SPAdes)	Environmental	Open in IMG/M
3300025287	Marine viral communities from the Deep Pacific Ocean - MSP-131 (SPAdes)	Environmental	Open in IMG/M
3300025596	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_150m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025660	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI073_LV_10m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025663	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_135m_DNA (SPAdes)	Environmental	Open in IMG/M
3300026188	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV43 (SPAdes)	Environmental	Open in IMG/M
3300026202	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF43B (SPAdes)	Environmental	Open in IMG/M
3300026213	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73 (SPAdes)	Environmental	Open in IMG/M
3300026256	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV76 (SPAdes)	Environmental	Open in IMG/M
3300026259	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV63 (SPAdes)	Environmental	Open in IMG/M
3300027677	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_3_300m (SPAdes)	Environmental	Open in IMG/M
3300027685	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Bottom_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027791	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_130 (SPAdes)	Environmental	Open in IMG/M
3300028287	Marine microbial communities from Saanich Inlet, British Columbia, Canada - SI060_120m	Environmental	Open in IMG/M
3300029319	Marine viral communities collected during Tara Oceans survey from station TARA_032 - TARA_A100001516	Environmental	Open in IMG/M
3300030728	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_940_32.3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031142	Marine microbial communities from water near the shore, Antarctic Ocean - #353	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031559	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB4_937_33.10 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031580	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1111_SCM (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031581	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - AG5_1286_33.1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031606	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Tmax	Environmental	Open in IMG/M
3300031630	Marine microbial communities from water near the shore, Antarctic Ocean - #38	Environmental	Open in IMG/M
3300031659	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #82	Environmental	Open in IMG/M
3300031695	Marine microbial communities from water near the shore, Antarctic Ocean - #233	Environmental	Open in IMG/M
3300031696	Marine microbial communities from Ellis Fjord, Antarctic Ocean - #262	Environmental	Open in IMG/M
3300031721	Marine microbial communities from water near the shore, Antarctic Ocean - #181	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031800	Marine microbial communities from Western Arctic Ocean, Canada - CB6_Bottom_1051	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031886	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 3416	Environmental	Open in IMG/M
3300032048	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 32315	Environmental	Open in IMG/M
3300032145	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_1000m_313 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032146	Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_Tmax_316 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032820	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
Deep_10165281	3300001781	Hydrothermal Vent Plume	KESYFPNQTKQDENVDQESDVSEVEETPKMNDIMEAYSKAIARK*
Vondamm_101043852	3300001783	Hydrothermal Vent Plume	NQTKQDANVEQESDVPEVEETPEMSNIMEAYSKAIARK*
shallow_11066942	3300001845	Hydrothermal Vent Plume	ESYFPNQTKQDENVEQESDVSSDGEEVSEPKLNNIMEAYSKAIARK*
GOS2216_101217212	3300001972	Marine	TIKESYFPNQVKQDENIDQKDVVSEDSPSEETPKMNNIMEAYSKAISRK*
Ga0005234J37281_10468491	3300002776	Marine	ESYFPSQVKKDEVISEDSVSSEEQEETPVKMNNIMEAYSKAIAR*
Ga0066860_102699051	3300005399	Marine	FENKIKTIKESYFPNQTKQDENVEQESDVSSDGEEVSDPKLNNIMEAYSKAIARK*
Ga0066868_100056291	3300005508	Marine	NGVKQDENVEQEDVSSEDSEETPVKMNNIMEAYSKAIARN*
Ga0066834_100736592	3300005596	Marine	KTIKESYFPNQTKQDENVEQESDGSSDGEEVSDPKLNNIMEAYSKAIARN*
Ga0066369_102263492	3300005969	Marine	GDVEDFESKVKQIKESYFPSQVKKDEVISEEGVSSEDQEETPVKMNNIMEAYSHAIARK*
Ga0066373_101098712	3300006011	Marine	KQDANVEQESDDSPTEETPEMTNIMEAYSKAIARN*
Ga0082015_10530041	3300006090	Marine	QDENVEQEDVSSEDSEETPVKMNNIMEAYSKAIARN*
Ga0082019_10372531	3300006093	Marine	ADNFENKVKTIKESYFPNQTKQDANVEQESDVPETEETPEMSNIMEAYSKAIARN*
Ga0068504_13426792	3300006304	Marine	ESYFPNQTKQDENVEQESDGSSDGEEVSDPKLNNIMEAYSKAIARN*
Ga0068471_13575645	3300006310	Marine	NQTKQDANVEQESDDSPTEETPEMNNIMEAYSKAIARN*
Ga0068471_13942891	3300006310	Marine	NQTKQDANVEQESDGSEAEETPEMNNIMEAYSKAIARN*
Ga0068477_12653271	3300006326	Marine	LIEGVSYENDADDFENKVKTIKESYFPNQTKQDENVEQESDGSSDGEEVSDPKLNNIMEAYSKAIARN*
Ga0068502_19052211	3300006336	Marine	QTIKESYFPNQTKQDENVEQESDVSSDGEEVSEPKLNNIMEAYSKAIARN*
Ga0099957_10901086	3300006414	Marine	QDENVEQESDGSSDGEEVSDPKLNNIMEAYSKAIARN*
Ga0098035_11126982	3300006738	Marine	ENKVKMIKESYFPNQVKQDENIEQEDVVSEEEVTEETPKMNNIMEAYSKAIARK*
Ga0098058_11007282	3300006750	Marine	ESYFPNQVKQDENIEQEDVVSEEEVTEETPKMNNIMEAYSKAIARK*
Ga0098039_10183694	3300006753	Marine	KQDGNIEQKDVVTEDSPSEETPKMNNIMEAYTKAMTRK*
Ga0098044_12728832	3300006754	Marine	EGVSYDEDADNFENKVKTIKESYFPNQTKQDANVEQESDVPETEETPEMSNIMEAYSKAIARN*
Ga0098054_12428271	3300006789	Marine	NKVKTIKESYFPNQTKQDANVEQESDVPETEETPEMSNIMEAYSKAIARN*
Ga0066376_105964801	3300006900	Marine	EGVSYEDDADDFENKITTIKESYFPNQTKQDQNVDQESDVSSDGEEVSDPKLNNIMEAYSKAIARK*
Ga0066376_107574842	3300006900	Marine	NQTKQDQNVDQESDVSEVEETPEMNNIMEAYSKAIARK*
Ga0066372_109906841	3300006902	Marine	NQTKQDENVEQESDGSSDGEEVSDPKLNNIMEAYSKAIARN*
Ga0098057_11710052	3300006926	Marine	VKQDGNIEQKDVVTEDSPSEETPKMNNIMEAYTKAMTRK*
Ga0101672_10682532	3300007152	Volcanic Co2 Seeps	NKVKMIKESYFPNQVKQDENIEQEDVVSDEEVTQETPKMNNIMEAYSKAIARQ*
Ga0079247_16596902	3300007330	Marine	KVKTIKENYFPNQVKQDENVEQESDVTSEESEETPVKMNNIMEAYSKAIARN*
Ga0098052_13336212	3300008050	Marine	KQDANVEQENDDSPTEETPEMNNIMEAYSKAIARK*
Ga0114916_11580521	3300008221	Deep Ocean	DFESKVKQIKESYFPSQVKKDEVISEEGVSSEDQEETPVKMNNIMEAYSQAIAR*
Ga0114996_103668801	3300009173	Marine	KQDGNVEQEDVMANDSEETPVKVSNIMEAYSKAIARK*
Ga0114996_112933671	3300009173	Marine	EDFESKVKQIKESYFPSQVKKDEVISEEGVSSEDQEETPVKMSNIMEAYSHAIARK*
Ga0118716_12445751	3300009370	Marine	DNKKQDENVEQVDASDGEEVSEPKMNSIMEAYSKAIARK*
Ga0114993_1000717514	3300009409	Marine	PNQQKQDGNVEQEDVMANDSEETPVKVSNIMEAYSKAIARK*
Ga0114993_104515121	3300009409	Marine	PNQQKQDGNVEQEDVMANDSEETPVKVSNIMEAYSKAIARN*
Ga0114993_112748361	3300009409	Marine	DVEDFESKVKQIKESYFPSQVKKDEVISEENVSSEDQEETPVKMNNIMEAYSQAIAR*
Ga0114932_100441491	3300009481	Deep Subsurface	KTIKENYFPETIKQDENVEQLDSSSEVSEKSEPKMNHIMEAYSKAIARK*
Ga0114932_101497781	3300009481	Deep Subsurface	KESYFPNQVKQDENIDQKDVVSEDSPSEEAPKMNNIMEAYSQAIARK*
Ga0115004_103330791	3300009526	Marine	PSQVKKDEVISEENVSSEDQEETPVKMNNIMEAYSQAIAR*
Ga0105228_1192431	3300009613	Marine Oceanic	YFPNQTKQDANVEQESDDSPTEETPEMTNIMEAYSKAIARN*
Ga0105236_10583891	3300009619	Marine Oceanic	KIKTIKESYFPNQTKQDANVEQESDDSPTEETPEMNNIMEAYSKAIARN*
Ga0115001_103680482	3300009785	Marine	YFPSQVKKDEVISEESVSSEEQEETPVKMNNIMEAYSKAIARN*
Ga0114999_102742922	3300009786	Marine	GNVEQEDVMANDSEETPVKVSNIMEAYSKAIARK*
Ga0114934_105350431	3300011013	Deep Subsurface	QVKQDENIDQKDVVSEDSPSEEAPKMNNIMEAYSQAIARK*
Ga0138349_11488691	3300011312	Deep Ocean	KESYFPNQTKQDENVEQESDVPETEETPEMSNIMEAYSKAIARN*
Ga0138359_10076301	3300011322	Marine	DDADDFENKVKTIKENYFPNQTKQDENVEQESDVTAEDGEETPVKVSNIMEQYAKAIARN
Ga0138388_12032341	3300011328	Marine	IKESYFPNQQKQDENVEQENAGSDEEVSPEMNSIMEAYSKAIARK*
Ga0181590_102321982	3300017967	Salt Marsh	NQVKQDENIEQEYVVSEDEVSEETTKMNNIMEAYSRAIARK
Ga0181591_108622981	3300018424	Salt Marsh	ADDFENKVKMIKESYFPNQVKQDENIEQEDVVSEDEVSEETPKMNNIMEAYSKAIARK
Ga0211631_10446791	3300020271	Marine	DADDFENKVKTIKESYFPNQTKQDENVEQESDVSSDGEEVSEPKLNNIMEAYSKAIARN
Ga0211613_11417042	3300020353	Marine	SYFPESKKQDENVEQLDSSSEVTEKSEEPKMNHIMEAYSKAIARK
Ga0211636_103263321	3300020400	Marine	FENKVKMIKESYFPNQVKQDENIEQEDVVSEEEVDETPKMNNIMEAYSKAIARK
Ga0211532_103788981	3300020403	Marine	DFENKVKMIKESYFPNQVKQDENIEQEDVVSDEEVTQETPKMNNIMEAYSKAIARQ
Ga0211475_103945072	3300020468	Marine	MIKESYFPNQVKQDENIEQEDVVSEEEVDETPKMNNIMEAYSKAIARK
Ga0211543_105917171	3300020470	Marine	ENKVKMIKESYFPNQVKQDENIEQEDVVSDEEVTQETPKMNNIMEAYSKAIARQ
Ga0206688_107159171	3300021345	Seawater	IKENYFPETIKKDENVEQLDSSSEVAEKSEPKMNHIMEAYSKAIARK
Ga0206689_104545782	3300021359	Seawater	FPNQQKQDENVEQVDASDGEEVSEPKMNNIMEAYSKAIARK
Ga0206689_107517881	3300021359	Seawater	FPDNKKQDENVEQVDASDGEEVSEPKMNNIMEAYSKAIARK
Ga0222717_103981782	3300021957	Estuarine Water	QTKQDENVEQESDGSSDGEEVSDPKLNNIMEAYSKAIARN
(restricted) Ga0233438_101171361	3300024255	Seawater	DEVISEESVSSEDQEETPVKMSNIMEAYSHAIARN
Ga0207900_1155001	3300025029	Marine	KIKTIKESYFPNQTKQDENVEQESDVSSDGEEVSEPKLNNIMEAYSKAIARK
Ga0208011_11030612	3300025096	Marine	NKKQDENVEQVDASDGEEVSDPKMNSIMEAYSKAIARK
Ga0208553_11168511	3300025109	Marine	KENYFPDNKKQDENVEQVDASDGEEVSEPKMNSIMEAYSKAIARK
Ga0208790_11907631	3300025118	Marine	YFPNQTKQDANVEQESDVPETEETPEMSNIMEAYSKAIARN
Ga0207903_10645942	3300025287	Deep Ocean	QNVDQESDVSSDGEEVSDPKLNNIMEAYSKAIARK
Ga0209662_11326321	3300025596	Marine	TLIEGVSYENDADDFENKVMMIKENYFPNQTKQDENVEQESDVSYNGEEVSEPKMNNIMEAYSKAIARK
Ga0209045_10650271	3300025660	Marine	PNQTKQDENVEQESDVSYNGEEVSEPKMNNIMEAYSKAIARK
Ga0209775_12172412	3300025663	Marine	KQDENVEQESDVSYNGEEVSEPKMNNIMEAYSKAIARK
Ga0208274_11280331	3300026188	Marine	KESYFPNGVKQDENVEQEDVSSEDSEETPVKMNNIMEAYSKAIARN
Ga0207984_10165211	3300026202	Marine	KQDENVEQESDGSSDGEEVSDPKLNNIMEAYSKAIARN
Ga0208131_10576771	3300026213	Marine	DFENKVKTIKESYFPNQTKQDENVEQESDVSSDGEEVSEPKLNNIMEAYSKAIARN
Ga0208639_10286163	3300026256	Marine	KTIKESYFPNQTKQDENVEQVDASEGEEVSEPKMNNIMEAYSKAIARN
Ga0208896_10384262	3300026259	Marine	KQDENIEQKDVVTEDSPSEETPKMNNIMEAYSQAIARK
Ga0209019_10922832	3300027677	Marine	ENFEEKVKTIKENYFPDNKKQDENVEQVDASDGEEVSEPKMNSIMEAYSKAIARK
Ga0209554_10569192	3300027685	Marine	FESKVKQIKESYFPSQVKKDEVISEESVSSEDQEETPVKMNNIMEAYSQAIARK
Ga0209830_104446202	3300027791	Marine	YFPSQVKKDEVISEENVSSEDQEETPVKMNNIMEAYSQAIAR
Ga0257126_10769701	3300028287	Marine	YFPSQVKKDEVISEDSVSSEEQEETPVKMNNIMEAYSKAIARK
Ga0183748_10574872	3300029319	Marine	SYFPNQVKQDENIEQEDVVSEDEVSEETPKMNSIMEAYSKAIARK
Ga0308136_10770471	3300030728	Marine	SYFPSQVKKDEVISEESVSSEEQEETPVKMNNIMEAYSKAIARN
Ga0308022_10669661	3300031142	Marine	KKDEVISEESVSSEDQEETPVKMNNIMEAYSQAIARK
Ga0308022_11592822	3300031142	Marine	IKESYFPSQVKKDEVISEEGVSSEDQEETPVKMNNIMEAYSHAIARN
Ga0308022_11603342	3300031142	Marine	QKQDENVEQVDLSSDGEEKTAPKMNQIMEAYSKAIARN
Ga0308010_10894251	3300031510	Marine	KDEVISEEGVSSEDQEETPVKMNNIMEAYSQAIARN
Ga0308010_10906692	3300031510	Marine	IKESYFPSQVKKDEVISEESVSSEDQEETPVKMNNIMEAYSHAIARK
Ga0308135_10374301	3300031559	Marine	KKDEVISEESVSSEEQEETPVKLNNIMEAYSKAIARN
Ga0308132_10152541	3300031580	Marine	ESYFPNQIKQDENVEQESDASVDGEEVSEPKLNNIMEAYSKAIARN
Ga0308125_10241831	3300031581	Marine	VKKDEVISEESVSSEEQEETPVKLNNIMEAYSKAIARN
Ga0302119_100358221	3300031606	Marine	PNQTKQDENVEQESDVSSDGEEVSEPKLNNIMEAYSKAIARN
Ga0308004_101542491	3300031630	Marine	IKESYFPSQVKKDEVISEESVSSEDQEETPVKMNNIMEAYSQAIARK
Ga0307986_101923701	3300031659	Marine	SKVKQIKESYFPSQVKKDEVISEDSVSSEEQEETPVKMNNIMEAYSVAIARK
Ga0308016_101146062	3300031695	Marine	NFEEKVKTIKENYFPNQQKQDENVEQVDLSSDGEEKTAPKMNQIMEAYSKAIARN
Ga0307995_12894002	3300031696	Marine	ESYFPSQVKKDEVISEDSVSSEEQEETPVKMNNIMEAYSKAIARD
Ga0308013_100924862	3300031721	Marine	DSDNFEEKVKTIKENYFPNQQKQDENVEQVDLSSDGEETTAPKMNQIMEAYSKAIARK
Ga0315332_102732672	3300031773	Seawater	KQDENVEQVDASDGEEVSDPKMNSIMEAYSKAIARK
Ga0310122_104275022	3300031800	Marine	TIKESYFPNQTKQDENVEQESDVSEVEETPEMNNIMEAYSKAIARK
Ga0310120_104188212	3300031803	Marine	NKVKTIKESYFPNQIKQDENVEQESDVSVDGEEVSDPKLNNIMEAYSKAIARN
Ga0315318_105802581	3300031886	Seawater	KVKTIKESYFPSQVKQDENIEQKDVVTEDSPSEETPKMNNIMEAYSQAIARK
Ga0315329_102466892	3300032048	Seawater	KDDFENKVKTIKESYFPNQTKQDENVEQESDGSSDGEEVSDPKLNNIMEAYSKAIARN
Ga0315304_12005341	3300032145	Marine	DFENKVKTIKESYFPNQTKQDENVEQESDASVDGEEVSEPKLNNIMEAYSKAIARN
Ga0315303_10137541	3300032146	Marine	NKVKTIKESYFPNQTKQDDNVEQESDVSEVEETPKMNDIMEAYSKAIARN
Ga0315303_10703262	3300032146	Marine	ESYFPNQTKQDENVEQESDASVDGEEVSEPKLNNIMEAYSKAIARN
Ga0310342_1013209771	3300032820	Seawater	QDENVEQVDASDGEEVSEPKMTNIMEAYSKAIARK
Ga0310342_1025514822	3300032820	Seawater	DDFENKVKTIKESYFPNQTKQDENVEQESDGSSDGEEVSDPKLNNIMEAYSKAIARN

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.24
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.24
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F097519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign