NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F097503

Metagenome / Metatranscriptome Family F097503

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F097503
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 58 residues
Representative Sequence MDCDTFDGVVEMFEQRMIEGCIANEFKCTYTEETGEFVAEINGKFYVAMIREKK
Number of Associated Samples 79
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 91.35 %
% of genes near scaffold ends (potentially truncated) 19.23 %
% of genes from short scaffolds (< 2000 bps) 77.88 %
Associated GOLD sequencing projects 72
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (65.385 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(34.615 % of family members)
Environment Ontology (ENVO) Unclassified
(80.769 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(61.538 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.07%    β-sheet: 40.74%    Coil/Unstructured: 35.19%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF00303Thymidylat_synt 37.50
PF01883FeS_assembly_P 7.69
PF00692dUTPase 3.85
PF13481AAA_25 0.96
PF03237Terminase_6N 0.96
PF00005ABC_tran 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0207Thymidylate synthaseNucleotide transport and metabolism [F] 37.50
COG0717dCTP deaminaseNucleotide transport and metabolism [F] 3.85
COG0756dUTP pyrophosphatase (dUTPase)Defense mechanisms [V] 3.85


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A65.38 %
All OrganismsrootAll Organisms34.62 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002231|KVRMV2_100414435All Organisms → Viruses → Predicted Viral1168Open in IMG/M
3300003542|FS900DNA_10276069All Organisms → Viruses → Predicted Viral1015Open in IMG/M
3300004870|Ga0071103_121943All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria930Open in IMG/M
3300005551|Ga0066843_10174034Not Available608Open in IMG/M
3300006090|Ga0082015_1012628All Organisms → Viruses → Predicted Viral1454Open in IMG/M
3300006308|Ga0068470_1604234Not Available522Open in IMG/M
3300006310|Ga0068471_1070509All Organisms → Viruses → Predicted Viral1242Open in IMG/M
3300006318|Ga0068475_1049122All Organisms → Viruses → Predicted Viral2897Open in IMG/M
3300006339|Ga0068481_1200400Not Available1175Open in IMG/M
3300006466|Ga0082249_10022690Not Available986Open in IMG/M
3300006736|Ga0098033_1002658Not Available6649Open in IMG/M
3300006738|Ga0098035_1262601Not Available567Open in IMG/M
3300006752|Ga0098048_1026584All Organisms → Viruses → Predicted Viral1904Open in IMG/M
3300006753|Ga0098039_1067056Not Available1245Open in IMG/M
3300006768|Ga0098071_122831Not Available524Open in IMG/M
3300006789|Ga0098054_1015014All Organisms → Viruses → Predicted Viral3144Open in IMG/M
3300006789|Ga0098054_1030033Not Available2129Open in IMG/M
3300006841|Ga0068489_100194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae7971Open in IMG/M
3300006841|Ga0068489_130295Not Available2071Open in IMG/M
3300006929|Ga0098036_1023375All Organisms → Viruses → Predicted Viral1955Open in IMG/M
3300006929|Ga0098036_1207262Not Available595Open in IMG/M
3300007283|Ga0066366_10384192Not Available608Open in IMG/M
3300007758|Ga0105668_1024074All Organisms → cellular organisms → Bacteria7407Open in IMG/M
3300007963|Ga0110931_1005449All Organisms → Viruses → Predicted Viral4012Open in IMG/M
3300007963|Ga0110931_1027652All Organisms → Viruses → Predicted Viral1712Open in IMG/M
3300007963|Ga0110931_1214792Not Available573Open in IMG/M
3300007963|Ga0110931_1232433Not Available549Open in IMG/M
3300008050|Ga0098052_1042383Not Available2002Open in IMG/M
3300008216|Ga0114898_1018307Not Available2481Open in IMG/M
3300008219|Ga0114905_1271466Not Available528Open in IMG/M
3300009173|Ga0114996_10197801Not Available1623Open in IMG/M
3300009481|Ga0114932_10087518All Organisms → Viruses → Predicted Viral1949Open in IMG/M
3300009481|Ga0114932_10432516Not Available778Open in IMG/M
3300009604|Ga0114901_1089747Not Available985Open in IMG/M
3300009605|Ga0114906_1278215Not Available537Open in IMG/M
3300009622|Ga0105173_1004363Not Available1827Open in IMG/M
3300009622|Ga0105173_1031219Not Available846Open in IMG/M
3300009703|Ga0114933_10374514Not Available936Open in IMG/M
3300009706|Ga0115002_10572825Not Available812Open in IMG/M
3300009786|Ga0114999_11248760Not Available528Open in IMG/M
3300009791|Ga0105235_131620Not Available554Open in IMG/M
3300010149|Ga0098049_1226754Not Available570Open in IMG/M
3300010153|Ga0098059_1040008All Organisms → Viruses → Predicted Viral1893Open in IMG/M
3300011013|Ga0114934_10088261Not Available1525Open in IMG/M
3300014913|Ga0164310_10177738All Organisms → Viruses → Predicted Viral1305Open in IMG/M
3300017757|Ga0181420_1072643Not Available1080Open in IMG/M
3300017775|Ga0181432_1167763Not Available680Open in IMG/M
3300020398|Ga0211637_10255356Not Available697Open in IMG/M
3300020427|Ga0211603_10271465Not Available644Open in IMG/M
3300020444|Ga0211578_10221448Not Available763Open in IMG/M
3300020476|Ga0211715_10614908Not Available532Open in IMG/M
3300020477|Ga0211585_10000956All Organisms → cellular organisms → Bacteria42894Open in IMG/M
3300021442|Ga0206685_10031748Not Available1697Open in IMG/M
3300021791|Ga0226832_10010354Not Available2974Open in IMG/M
3300021791|Ga0226832_10032609All Organisms → Viruses → Predicted Viral1749Open in IMG/M
3300021791|Ga0226832_10082506Not Available1152Open in IMG/M
3300021791|Ga0226832_10111582All Organisms → Viruses → Predicted Viral1008Open in IMG/M
3300021791|Ga0226832_10266062Not Available690Open in IMG/M
3300021791|Ga0226832_10294772Not Available660Open in IMG/M
3300021978|Ga0232646_1135762Not Available829Open in IMG/M
3300022227|Ga0187827_10075292Not Available2587Open in IMG/M
3300024344|Ga0209992_10028190All Organisms → Viruses → Predicted Viral2900Open in IMG/M
(restricted) 3300024517|Ga0255049_10076223All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → unclassified Rhodobacteraceae → Rhodobacteraceae bacterium1518Open in IMG/M
(restricted) 3300024517|Ga0255049_10179739Not Available966Open in IMG/M
(restricted) 3300024520|Ga0255047_10485614Not Available621Open in IMG/M
3300025082|Ga0208156_1033659All Organisms → Viruses → Predicted Viral1089Open in IMG/M
3300025103|Ga0208013_1036335All Organisms → Viruses → Predicted Viral1385Open in IMG/M
3300025128|Ga0208919_1000644All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Aestuariivita → unclassified Aestuariivita → Aestuariivita sp.22509Open in IMG/M
3300025128|Ga0208919_1034303All Organisms → Viruses → Predicted Viral1820Open in IMG/M
3300025128|Ga0208919_1152055All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium717Open in IMG/M
3300025128|Ga0208919_1215121Not Available571Open in IMG/M
3300025141|Ga0209756_1168898Not Available864Open in IMG/M
3300025141|Ga0209756_1326327Not Available531Open in IMG/M
3300025239|Ga0207917_1047499Not Available568Open in IMG/M
3300025267|Ga0208179_1003310Not Available6906Open in IMG/M
3300025287|Ga0207903_1074170Not Available584Open in IMG/M
3300025873|Ga0209757_10149784Not Available730Open in IMG/M
3300027810|Ga0209302_10280106Not Available776Open in IMG/M
3300027838|Ga0209089_10014524Not Available5778Open in IMG/M
3300027838|Ga0209089_10082606All Organisms → Viruses → Predicted Viral2006Open in IMG/M
3300027839|Ga0209403_10369572Not Available764Open in IMG/M
3300027839|Ga0209403_10619626Not Available520Open in IMG/M
(restricted) 3300027865|Ga0255052_10044761All Organisms → Viruses → Predicted Viral2208Open in IMG/M
3300028022|Ga0256382_1101618All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium690Open in IMG/M
3300028022|Ga0256382_1133470Not Available596Open in IMG/M
3300031655|Ga0308018_10213587Not Available652Open in IMG/M
3300031757|Ga0315328_10253923All Organisms → Viruses → Predicted Viral1029Open in IMG/M
3300031773|Ga0315332_10553844Not Available720Open in IMG/M
3300031801|Ga0310121_10322822Not Available898Open in IMG/M
3300031801|Ga0310121_10338662Not Available870Open in IMG/M
3300031802|Ga0310123_10564394Not Available708Open in IMG/M
3300031803|Ga0310120_10069040All Organisms → Viruses → Predicted Viral2056Open in IMG/M
3300031811|Ga0310125_10282269Not Available829Open in IMG/M
3300031811|Ga0310125_10367993Not Available702Open in IMG/M
3300032006|Ga0310344_10000609All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae27947Open in IMG/M
3300032006|Ga0310344_10039731All Organisms → Viruses → Predicted Viral3756Open in IMG/M
3300032011|Ga0315316_10316747All Organisms → Viruses → Predicted Viral1308Open in IMG/M
3300032032|Ga0315327_10180218All Organisms → Viruses → Predicted Viral1323Open in IMG/M
3300032278|Ga0310345_10023585All Organisms → cellular organisms → Bacteria5158Open in IMG/M
3300032360|Ga0315334_11806204Not Available519Open in IMG/M
3300032820|Ga0310342_100440263Not Available1435Open in IMG/M
3300032820|Ga0310342_100527047Not Available1323Open in IMG/M
3300034655|Ga0326746_037901Not Available519Open in IMG/M
3300034656|Ga0326748_064402Not Available522Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine34.62%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean6.73%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater5.77%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine5.77%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater5.77%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids5.77%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine4.81%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface4.81%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine3.85%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater3.85%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic2.88%
MarineEnvironmental → Aquatic → Marine → Oceanic → Photic Zone → Marine1.92%
Filtered SeawaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Filtered Seawater1.92%
SeawaterEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Seawater1.92%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater1.92%
SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Sediment0.96%
Background SeawaterEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Background Seawater0.96%
MarineEnvironmental → Aquatic → Marine → Oceanic → Abyssal Plane → Marine0.96%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.96%
Diffuse Hydrothermal Flow Volcanic VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent0.96%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Unclassified → Hydrothermal Vent Fluids0.96%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.96%
Marine SedimentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment0.96%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002231Marine sediment microbial communities from Santorini caldera mats, Greece - red matEnvironmentalOpen in IMG/M
3300003542Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNAEnvironmentalOpen in IMG/M
3300004870Mid-Atlantic Ridge North Pond Expedition - Sample Bottom Water CTD 2012EnvironmentalOpen in IMG/M
3300005551Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF89AEnvironmentalOpen in IMG/M
3300006090Marine microbial communities from the Eastern Tropical South Pacific Oxygen Minumum Zone, cruise NBP1315, 2013 - sample NBP124EnvironmentalOpen in IMG/M
3300006308Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_2_0500mEnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006318Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT231_1_0200mEnvironmentalOpen in IMG/M
3300006339Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500mEnvironmentalOpen in IMG/M
3300006466Deep-sea sediment bacterial and archaeal communities from Fram Strait - Hausgarten VIEnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006752Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006768Marine viral communities from Cariaco Basin, Caribbean Sea - 29_WHOI_OMZEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006841Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT234_2_0200mEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007283Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_250_ad_252m_LV_BEnvironmentalOpen in IMG/M
3300007758Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample CTDPlume_2015_DNA CLC_assemblyEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009481Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaGEnvironmentalOpen in IMG/M
3300009604Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16EnvironmentalOpen in IMG/M
3300009605Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9EnvironmentalOpen in IMG/M
3300009622Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3321_4155EnvironmentalOpen in IMG/M
3300009703Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV12_W25 metaGEnvironmentalOpen in IMG/M
3300009706Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86EnvironmentalOpen in IMG/M
3300009786Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126EnvironmentalOpen in IMG/M
3300009791Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3819_2500EnvironmentalOpen in IMG/M
3300010149Marine viral communities from the Subarctic Pacific Ocean - 13B_ETSP_OMZ_AT15268_CsCl metaGEnvironmentalOpen in IMG/M
3300010153Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300014913Subseafloor sediment microbial communities from Guaymas Basin, Gulf of California, Mexico - Guay1, Core 4569-9, 0-3 cmEnvironmentalOpen in IMG/M
3300017757Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22EnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020398Marine microbial communities from Tara Oceans - TARA_B100000949 (ERX555993-ERR599072)EnvironmentalOpen in IMG/M
3300020427Marine microbial communities from Tara Oceans - TARA_B000000460 (ERX555922-ERR598960)EnvironmentalOpen in IMG/M
3300020444Marine microbial communities from Tara Oceans - TARA_B100001245 (ERX556114-ERR598980)EnvironmentalOpen in IMG/M
3300020476Marine microbial communities from Tara Oceans - TARA_B100001750 (ERX556108-ERR598958)EnvironmentalOpen in IMG/M
3300020477Marine microbial communities from Tara Oceans - TARA_B100001123 (ERX555935-ERR599156)EnvironmentalOpen in IMG/M
3300021442Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300021978Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Perseverance_CTD_V16A_01_btl17 _150kmerEnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024344Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024517 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_3EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025082Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025103Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025141Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)EnvironmentalOpen in IMG/M
3300025239Marine microbial communities from the Deep Atlantic Ocean - MP0556 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025287Marine viral communities from the Deep Pacific Ocean - MSP-131 (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300027810Marine eukaryotic phytoplankton communities from Arctic Ocean - Arctic Ocean ARC135M Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300027865 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21EnvironmentalOpen in IMG/M
3300028022Seawater viral communities from deep brine pools at the bottom of the Mediterranean Sea - LS1 750mEnvironmentalOpen in IMG/M
3300031655Marine microbial communities from water near the shore, Antarctic Ocean - #282EnvironmentalOpen in IMG/M
3300031757Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 200m 32315EnvironmentalOpen in IMG/M
3300031773Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300031802Marine microbial communities from Western Arctic Ocean, Canada - CB6_AW_1057EnvironmentalOpen in IMG/M
3300031803Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983EnvironmentalOpen in IMG/M
3300031811Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032011Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416EnvironmentalOpen in IMG/M
3300032032Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 32315EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034655Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 494_2800EnvironmentalOpen in IMG/M
3300034656Seawater viral communities from Mid-Atlantic Ridge, Atlantic Ocean - 502_2477EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
KVRMV2_10041443523300002231Marine SedimentMDGHTRTNMDCTTEAVILFEDIVEMFEQRMMEGCIANEFKCTYNEEKGEFIAEIDGKYYVAMTREKK*
FS900DNA_1027606933300003542Diffuse Hydrothermal Flow Volcanic VentMDCDTFDHVVEVFEQRMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK*
Ga0071103_12194323300004870MarineMDCDTFDHVVEMFEQKMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK*
Ga0066843_1017403413300005551MarineSSKKSRGWLAIRGLDMDCDTFDSVVEMFEQRMIEGCIANEFKCTYTKETGEFVAEINGKFYVAMIREKK*
Ga0082015_101262823300006090MarineMDCDTFDGVVEMFEQRMIEGCIANEFKCTYTEETGEFVAEINGKFYVAMTREKR*
Ga0068470_160423413300006308MarineLAIRGLDMDCDTFDCIVEVFEQRMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK*
Ga0068471_107050943300006310MarineLAIRGLDMDCDTFDCIVEVFEQRMIEGCIANEFKCVYTEETGEFV
Ga0068475_104912223300006318MarineMDCDTFDGIVEMFEQRMIEGCIANEFKCTYNIEKGEFIAEIDGKYYVAMTREKK*
Ga0068481_120040023300006339MarineMDCDTFDGVVEIFEQRMIEGCITNEFKCTYTEETGEFVAEINGKFYVAMIREKK*
Ga0082249_1002269023300006466SedimentMDCDTFDCIVEVFEQRMMEGCIANEFKCTYTEETGEFIAEINGKFYVAMIREKK*
Ga0098033_100265863300006736MarineMDCDTFDGVVEMFEQRMIEGCIANEFKCTYNEEKGEFVAEINGKFYVAMTREKR*
Ga0098035_126260133300006738MarineMDCDTFDGVVEMFEQRMIEGCIANEFKCTYTEETGEFVAEING
Ga0098048_102658423300006752MarineMDGHTRTEMDCTTEAVVLFEDVVEVFEHRMIEGCIANEFKCTYNEKKGEFVAEINGKFYVAMTREKK*
Ga0098039_106705643300006753MarineMDGHTRTEMDCTTEAIVLFEEIVEVFEHRMIEGCIANEFKCTYNEEKGEFVAEINGKFYVAMTREKK*
Ga0098071_12283113300006768MarineMVGHTRTNMDCTTETVILFEDIVKMFEQRMMESCIANEFKCTYNIEKGEFIAEIDGKYYIAMTREKK*
Ga0098054_101501433300006789MarineMDGHTRTEMDCTTEAVVLFEDLVEVFERRMIEGCIADKFKCTYNAEKGEFVAEINGKFYVAMTREKK*
Ga0098054_103003343300006789MarineMDGHTRTEMDCTTEAVVLFEDVVDVFEHRMIEGCIANEFKCTYNEEKGEFVAEINGKFYVAMTREKR*
Ga0068489_100194113300006841MarineLAIRGLDMDCDTFDGIVEMFEQRMMEGCIANEFKCTYNIEKGEFIAEIDGKYYVAMTREKK*
Ga0068489_13029543300006841MarineLAIRGLDMDCDTFDGIVEMFEQRVMEGCIANEFKCTYNEEKGEFIAEIDGKYYVAMTREKK*
Ga0098036_102337533300006929MarineMDGHTRTEMDCTTEAVVLFEDVVDVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVAMTREKK*
Ga0098036_120726233300006929MarineMDGHTRTEMDCTTEAVVLFEEIVEVFEHRMIEGCIANKFKCTYNAEKGEFVAEINGKFYVSMIR
Ga0066366_1038419223300007283MarineMDCDTFDGIVEMFEQRIMEGCIANEFKCTYNIEKGEFIAEIDGKYYVAMTREKK*
Ga0105668_1024074103300007758Background SeawaterMDCDTFDYVVEIFEQKMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK*
Ga0110931_100544963300007963MarineMDCTTEAVVLFEDVVDVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVAMTREKK*
Ga0110931_102765233300007963MarineMDCTTEAVVLFEEVVEVFERRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVSMIREKK*
Ga0110931_121479223300007963MarineMDCTTEAVVLFEDLVEVFERRMIEGCIADKFKCTYNAEKGEFVAEINGKFYVAMTREKK*
Ga0110931_123243333300007963MarineMDCTTEAVVLFEEVVEVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVAMTREKK*
Ga0098052_104238323300008050MarineMDCTTEAVVLFEDVVDVFEHRMIEGCIANEFKCTYNEEKGEFVAEINGKFYVAMTREKR*
Ga0114898_101830753300008216Deep OceanMDCDTFDNVIEVFEQRMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK*
Ga0114905_127146633300008219Deep OceanMDCDTFDNVVEVFEQKMIEGCIANEFKCVYTEETGEFIAEINGK
Ga0114996_1019780133300009173MarineMDCDTFDGVIEVFEHRMIEGCIANEFKCTYTEETGEFVAEINGKFYVAMIREKK*
Ga0114932_1008751873300009481Deep SubsurfaceMDCDTFDGIVEMFEQRMMEGCIANEFKCTYNEEKGEFIAEIDGKYYVAMTREKK*
Ga0114932_1043251613300009481Deep SubsurfaceMDCDTFDGIVEMFEQRMIEGCIANEFKCTYNAEKGEFVAEIDGKYYVAMTREKK*
Ga0114901_108974713300009604Deep OceanCDTFDNVIEVFEQRMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK*
Ga0114906_127821513300009605Deep OceanMDGHTRTEMDCTTEAVVLFEDVVEVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVSMTREKR*
Ga0105173_100436323300009622Marine OceanicMDCDTFDHVVEMFEQKMIEGCIADEFKCTYTEETREFVAEINGKFYVAMIREKK*
Ga0105173_103121913300009622Marine OceanicMDCDTFDHVVEMFEQKMIEGCIADEFKCTYTEETGEFVAEINGKFYVAMIREKK*
Ga0114933_1037451423300009703Deep SubsurfaceMDCDTFDGIVEMFEQRMMEGCIANEFKCTYNEEKGEFIAEINGKYYVAMTREKK*
Ga0115002_1057282523300009706MarineMDCDTFDHVVEVFEHRMIEGCIANEFKCTYTEETGEFVAEIGGKFYVAMIREKK*
Ga0114999_1124876023300009786MarineMDCDTFDCVIEMFEQRMMEGCIANEFKCTYTEETGEFIAEINGKFYVAMIREKK*
Ga0105235_13162013300009791Marine OceanicTFDNVIEVFEQKMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK*
Ga0098049_122675413300010149MarineTTEAVVLFEDVVDVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVAMTREKK*
Ga0098059_104000843300010153MarineMDCTTEAVVLFEDLVEVFERRMIEGCIADKFKCTYNAEQGEFVAEINGKFYVAMTREKK*
Ga0114934_1008826123300011013Deep SubsurfaceMDCTTEAVILFEDIVEMFEQRMMEGCIANEFKCTYNIEKGEFIAEIDGKYYVAMTREKK*
Ga0164310_1017773843300014913Marine SedimentMDCDTFDGVVEMFEHRMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK*
Ga0181420_107264333300017757SeawaterMDGHTRTKMDCTTEAVVLFEDLVEVFERRMIEGCIADKFKCTYNAEKGEFVAEINGKFYVAMTREKK
Ga0181432_116776333300017775SeawaterLAIRGLNMDCDTFDGVVEMFEQRMIEGCIANEFKCTYTAETGEFVAEINGKFYVAMIREK
Ga0211637_1025535633300020398MarineMDCDTFDNVVEVFEQKMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK
Ga0211603_1027146523300020427MarineLAIRGLDMDCDTFDCIVEVFEQRMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREK
Ga0211578_1022144823300020444MarineLAIRGLDMDCDTFDCIVEVFEQRMLEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREK
Ga0211715_1061490823300020476MarineMVGHTRTNMDCTTEAVVLFEDIVEMFEQRMMEGCIANEFKCTYNIEKGEFIAEIDGKYYVAMTREKK
Ga0211585_10000956483300020477MarineMDCDTFDGIVEMFEQRMIEGCIANEFKCTYNAEKGEFIAEINGKYYVAMTREKK
Ga0206685_1003174843300021442SeawaterMDGHTRTEMDCTTEAVMLFEDVVDVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVSMTREKR
Ga0226832_1001035463300021791Hydrothermal Vent FluidsLAIRGLDMDCDTFDGIVEMFEQRMIEGCIANEFKCTYNIEKGEFIAEIDGKYYVAMTREK
Ga0226832_1003260913300021791Hydrothermal Vent FluidsMVGHTRTNMDCTTEAVVLFEDIVEMFEQRMMEGCIANEFKCTYNIEKGEFIAEIDGKYYVAMTREK
Ga0226832_1008250633300021791Hydrothermal Vent FluidsMDCDTFDCVVEMFEQRMIEGCIANEFKCVYTEETGEFIAEINGKFYVAMIREKK
Ga0226832_1011158233300021791Hydrothermal Vent FluidsLAIRGLDMDCDTFDGIVEMFEQRMIEGCIANEFKCTYNEKKGEFIAEIDGKYYVAMTREK
Ga0226832_1026606223300021791Hydrothermal Vent FluidsMDCDTFDGIIKMFEQRMIEGCIANEFKCTYNIEKGEFIAEIDGKYYVAMTREKK
Ga0226832_1029477223300021791Hydrothermal Vent FluidsMDGHTRTEMDCTTEAVVLFEDLVEVFERRMIEGCIADKFKCTYNAEKGEFVAEINGKFYVSMTREKR
Ga0232646_113576223300021978Hydrothermal Vent FluidsMDCDTFDHVVEMFEQKMIEGCVADEFKCVYTEETGEFVAEINGKFYVAMIREKK
Ga0187827_1007529233300022227SeawaterMDCDTFDGVVEMFEQRMIEGCIANEFKCTYTKETGEFVAEINGKFYVAMIREKK
Ga0209992_1002819063300024344Deep SubsurfaceLAIRGLDMDCDTFDGIVEIFEQRIMEGCIANEFKCTYNEEKGEFIAEIDGKYYVAMTREK
(restricted) Ga0255049_1007622333300024517SeawaterDVVDVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVAMTREKK
(restricted) Ga0255049_1017973933300024517SeawaterMVGHTRTEMDCTTEAVVLFEDVVEVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVSMTREKR
(restricted) Ga0255047_1048561423300024520SeawaterMDGHTRTEMDCTTEAVVLFEDVVEVFEHRMIEGCIANEFKCTYTEKTGEFVAEINGKFYVAMIREKK
Ga0208156_103365933300025082MarineMDCDTFDGVVEMFEQRMIEGCIANEFKCTYNEEKGEFVAEINGKFYVAMTREKR
Ga0208013_103633523300025103MarineMDGHTRTEMDCTTEAVVLFEDVVDVFEHRMIEGCIANEFKCTYNEEKGEFVAEINGKFYVAMTREKR
Ga0208919_100064483300025128MarineMDGHTRTEMDCTTEAVVLFEDVVDVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVAMTREKK
Ga0208919_103430323300025128MarineMDGHTRTEMDCTTEAVVLFEDVVDVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVAMTREKR
Ga0208919_115205533300025128MarineMDGHTRTEMDCTTEAVVLFEDLVDVFERRMIEGCIADKFKCTYNAEKGEFVAEINGKFYVAMTREK
Ga0208919_121512123300025128MarineMDGHTRTEMDCTTEAVVLFEEVVEVFERRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVSMIREKK
Ga0209756_116889823300025141MarineMDGHTRTEMDCTTEAVVLFEDVVEVFEHRMIEGCIANEFKCTYNTEKGEFIAEINGKYYVAMTREKK
Ga0209756_132632723300025141MarineMDCTTEAVVLFEDVVNVFEHRMIEGCIANEFKCTYTEKTGEFVAEINGKFYVAMIREKK
Ga0207917_104749923300025239Deep OceanMDCDTFDHVVEMFEQKMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK
Ga0208179_100331063300025267Deep OceanMDCDTFDNVIEVFEQRMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK
Ga0207903_107417023300025287Deep OceanMDCDTFDHVVEMFEQKMIEGCIADEFKCTYTEETGEFIAEINGKFYVAMIREKK
Ga0209757_1014978423300025873MarineMDCDTFDGVVEMFEQRMIEGCIANEFKCTYTAETGEFVAEINGKFYVAMIREKK
Ga0209302_1028010623300027810MarineMDCDTFDCVIEMFEQRMMEGCIANEFKCTYTEETGEFIAEINGKFYVAMIREKK
Ga0209089_1001452433300027838MarineMDCDTFDCVIETFEHRMMEGCIANEFKCTYTEETGEFIAEINGKFYVAMIREKK
Ga0209089_1008260633300027838MarineMDCDTFDGVIEVFEHRMIEGCIANEFKCTYTEETGEFVAEINGKFYVAMIREKK
Ga0209403_1036957223300027839MarineMDCDTFDHVVEVFEHRMIEGCIANEFKCTYTEETGEFVAEIGGKFYVAMIREKK
Ga0209403_1061962623300027839MarineMDCDTFDCVIETFEHRMMEGCIANEFKCTYTEETGEFIAEINGKFYVA
(restricted) Ga0255052_1004476173300027865SeawaterMDCTTEAVVLFEDVVEVFEHRMIEGCIANEFKCTYNAEKGEFVAEINGKFYVSMTREKR
Ga0256382_110161833300028022SeawaterLAIRGLDMDCDTFDGIVEMFEQRMMEGCIANEFKCTYNEEKGEFIAEIDGKYYVAMTREK
Ga0256382_113347023300028022SeawaterLAIRGLDMDCDTFDGIVEMFEQRMIEGCIANEFKCTYNAEKGEFVAEIDGKYYVAMTREK
Ga0308018_1021358733300031655MarineMDCDTFDGVVEMFEQRMIEGCIANEFKCTYTEETGEFVAEINGKFYVAMIREKK
Ga0315328_1025392323300031757SeawaterMVGHTRTEMDCTTEAVVLFEDVVEVFEHRMIEGCIANEFKCTYTEKTGEFVAEINGKFYVAMIREKK
Ga0315332_1055384413300031773SeawaterDVVEVFEHRMIEGCIANEFKCTYTEKTGEFVAEINGKFYVAMIREKK
Ga0310121_1032282223300031801MarineLAIRGLDMDCDTFDCIVEVFEHRMMEGCIANEFKCVYTEETGEFIAEINGKFYVAMIREK
Ga0310121_1033866223300031801MarineMDCDTFDCIVEVFEQRMMEGCIANEFKCTYTEETGEFIAEINGKFYVAMIREKK
Ga0310123_1056439433300031802MarineMDCDTFDCIVEVFEQRMMEGCIANEFKCTYTEETGEFIAEI
Ga0310120_1006904073300031803MarineMDCDTFDCIVEVFEQRMMEGCIANEFKCTYTEETGEFIA
Ga0310125_1028226943300031811MarineMDCDTFDCIVEVFEQRMMEGCIANEFKCTYTEETGEFIAEINGKFYVAMIRE
Ga0310125_1036799323300031811MarineMDCDTFDCVIETFEQRMMEGCIANEFKCTYTEETGEFIAEINGKFYVAMIREKK
Ga0310344_1000060963300032006SeawaterMDCDTFDGIVEMFEQRVMEGCIANEFKCTYNEEKGEFIAEIDGKYYVAMTREKK
Ga0310344_1003973163300032006SeawaterLAIRGLDMDCDTFDGIVEMFEQRMMEGCIANEFKCTYNIEKGEFIAEIDGKYYVAMTREK
Ga0315316_1031674733300032011SeawaterMDGHTRTEMDCTTEAVVLFEDVVDVFEHRMIEGCIANEFKCTYNAEKGEFIAEINGKYYVAMTREKK
Ga0315327_1018021843300032032SeawaterMDGHTRTEMDCTTEAVVLFEDVVDVFEHRMIEGCIANEFKCTYNADKGEFIAEINGKYYVAMTREKK
Ga0310345_1002358593300032278SeawaterMDCDTFDCIVEVFEQRMLEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK
Ga0315334_1180620423300032360SeawaterLAIRGLNMDCDTFDGVVEMFEQRMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREK
Ga0310342_10044026323300032820SeawaterLAIRGLDMDCDTFDGIVEMFEQRVMEGCIANEFKCTYNEEKGEFIAEIDGKYYVAMTREK
Ga0310342_10052704733300032820SeawaterMDCDTFDCIVEVFEQRMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK
Ga0326746_037901_2_1663300034655Filtered SeawaterMDCDTFDNVIEVFEQKMIEGCIANEFKCVYTEETGEFVAEINGKFYVAMIREKK
Ga0326748_064402_2_1483300034656Filtered SeawaterMDCDTFDCIVEVFEHRMMEGCIANEFKCTYTEETGEFIAEINGKFYVLL


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