NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F097501

Metagenome / Metatranscriptome Family F097501

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F097501
Family Type Metagenome / Metatranscriptome
Number of Sequences 104
Average Sequence Length 59 residues
Representative Sequence MASNKHSADGKIPENGLSSLEKATESPKELGMDSHGPNQMPMGIVKKKVSTPSEGSFNFR
Number of Associated Samples 71
Number of Associated Scaffolds 104

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 78.85 %
% of genes near scaffold ends (potentially truncated) 27.88 %
% of genes from short scaffolds (< 2000 bps) 77.88 %
Associated GOLD sequencing projects 60
AlphaFold2 3D model prediction Yes
3D model pTM-score0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (52.885 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine
(68.269 % of family members)
Environment Ontology (ENVO) Unclassified
(94.231 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(80.769 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.17
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 104 Family Scaffolds
PF01327Pep_deformylase 0.96
PF137592OG-FeII_Oxy_5 0.96

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 104 Family Scaffolds
COG0242Peptide deformylaseTranslation, ribosomal structure and biogenesis [J] 0.96


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A52.88 %
All OrganismsrootAll Organisms47.12 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001739|JGI24658J20074_1022027Not Available504Open in IMG/M
3300002484|JGI25129J35166_1013168All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2065Open in IMG/M
3300002511|JGI25131J35506_1002025All Organisms → Viruses → Predicted Viral2977Open in IMG/M
3300002760|JGI25136J39404_1004314Not Available2396Open in IMG/M
3300002760|JGI25136J39404_1004527All Organisms → Viruses → Predicted Viral2349Open in IMG/M
3300002760|JGI25136J39404_1016671All Organisms → Viruses → Predicted Viral1324Open in IMG/M
3300002760|JGI25136J39404_1031291All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium975Open in IMG/M
3300002760|JGI25136J39404_1038858Not Available878Open in IMG/M
3300002760|JGI25136J39404_1080634Not Available609Open in IMG/M
3300002760|JGI25136J39404_1097823Not Available552Open in IMG/M
3300002760|JGI25136J39404_1105263Not Available532Open in IMG/M
3300003542|FS900DNA_10436564All Organisms → Viruses → Predicted Viral1115Open in IMG/M
3300005398|Ga0066858_10137726Not Available708Open in IMG/M
3300005509|Ga0066827_10220109Not Available658Open in IMG/M
3300006310|Ga0068471_1032113All Organisms → Viruses → Predicted Viral1466Open in IMG/M
3300006721|Ga0079248_1426569All Organisms → cellular organisms → Bacteria1189Open in IMG/M
3300006736|Ga0098033_1018507All Organisms → cellular organisms → Bacteria → Proteobacteria2174Open in IMG/M
3300006736|Ga0098033_1096765Not Available841Open in IMG/M
3300006738|Ga0098035_1311514Not Available512Open in IMG/M
3300006750|Ga0098058_1014803All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2308Open in IMG/M
3300006751|Ga0098040_1095414Not Available898Open in IMG/M
3300006753|Ga0098039_1104936Not Available973Open in IMG/M
3300006753|Ga0098039_1127007All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium874Open in IMG/M
3300006753|Ga0098039_1239248Not Available611Open in IMG/M
3300006753|Ga0098039_1287491Not Available550Open in IMG/M
3300006789|Ga0098054_1192624Not Available745Open in IMG/M
3300006926|Ga0098057_1137021Not Available597Open in IMG/M
3300006927|Ga0098034_1060543All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1107Open in IMG/M
3300006929|Ga0098036_1003719All Organisms → cellular organisms → Bacteria → Proteobacteria5289Open in IMG/M
3300007512|Ga0105016_1258332All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium760Open in IMG/M
3300007963|Ga0110931_1237017Not Available543Open in IMG/M
3300008050|Ga0098052_1251786Not Available675Open in IMG/M
3300008216|Ga0114898_1029820All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1834Open in IMG/M
3300008216|Ga0114898_1151536Not Available667Open in IMG/M
3300008219|Ga0114905_1210102Not Available624Open in IMG/M
3300009173|Ga0114996_10015348All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes7974Open in IMG/M
3300009173|Ga0114996_10016379All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium7650Open in IMG/M
3300009173|Ga0114996_10072677All Organisms → Viruses → Predicted Viral3000Open in IMG/M
3300009488|Ga0114925_10884531All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium645Open in IMG/M
3300009619|Ga0105236_1046988Not Available567Open in IMG/M
3300009791|Ga0105235_121057Not Available702Open in IMG/M
3300010151|Ga0098061_1034797All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2009Open in IMG/M
3300010155|Ga0098047_10058924Not Available1513Open in IMG/M
3300010155|Ga0098047_10118053Not Available1032Open in IMG/M
3300010155|Ga0098047_10247220Not Available678Open in IMG/M
3300011013|Ga0114934_10162860All Organisms → Viruses → Predicted Viral1048Open in IMG/M
3300017775|Ga0181432_1069164All Organisms → Viruses → Predicted Viral1016Open in IMG/M
3300020423|Ga0211525_10294210Not Available671Open in IMG/M
3300021345|Ga0206688_10098204All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1323Open in IMG/M
3300021348|Ga0206695_1680277All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1692Open in IMG/M
3300021355|Ga0206690_10381248All Organisms → Viruses → Predicted Viral1240Open in IMG/M
3300021791|Ga0226832_10110444All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1013Open in IMG/M
3300021791|Ga0226832_10489983Not Available528Open in IMG/M
3300022225|Ga0187833_10043966All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium3164Open in IMG/M
3300022227|Ga0187827_10698348Not Available576Open in IMG/M
(restricted) 3300024520|Ga0255047_10075271All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1742Open in IMG/M
3300025029|Ga0207900_115636Not Available632Open in IMG/M
3300025038|Ga0208670_105574All Organisms → Viruses → Predicted Viral1767Open in IMG/M
3300025042|Ga0207889_1020019Not Available625Open in IMG/M
3300025045|Ga0207901_1003641All Organisms → Viruses → Predicted Viral2406Open in IMG/M
3300025046|Ga0207902_1003199Not Available1498Open in IMG/M
3300025046|Ga0207902_1023875Not Available729Open in IMG/M
3300025052|Ga0207906_1010770All Organisms → Viruses → Predicted Viral1285Open in IMG/M
3300025052|Ga0207906_1011849All Organisms → Viruses → Predicted Viral1222Open in IMG/M
3300025097|Ga0208010_1005512All Organisms → Viruses → Predicted Viral3598Open in IMG/M
3300025109|Ga0208553_1075891All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium801Open in IMG/M
3300025109|Ga0208553_1094434Not Available697Open in IMG/M
3300025112|Ga0209349_1003413All Organisms → cellular organisms → Bacteria7234Open in IMG/M
3300025114|Ga0208433_1133879Not Available593Open in IMG/M
3300025122|Ga0209434_1095412All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium856Open in IMG/M
3300025125|Ga0209644_1002656Not Available3418Open in IMG/M
3300025125|Ga0209644_1025364Not Available1302Open in IMG/M
3300025125|Ga0209644_1037671Not Available1088Open in IMG/M
3300025125|Ga0209644_1095926All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium700Open in IMG/M
3300025128|Ga0208919_1008747All Organisms → Viruses → Predicted Viral4260Open in IMG/M
3300025241|Ga0207893_1055389Not Available570Open in IMG/M
3300025251|Ga0208182_1002588All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes7147Open in IMG/M
3300025260|Ga0207895_1018621All Organisms → Viruses → Predicted Viral1223Open in IMG/M
3300025267|Ga0208179_1013397All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium2487Open in IMG/M
3300025873|Ga0209757_10156030Not Available716Open in IMG/M
3300025873|Ga0209757_10184626All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium658Open in IMG/M
3300025873|Ga0209757_10237759Not Available578Open in IMG/M
3300025873|Ga0209757_10279461Not Available531Open in IMG/M
3300026115|Ga0208560_1004991Not Available1087Open in IMG/M
3300026115|Ga0208560_1006371Not Available979Open in IMG/M
3300026193|Ga0208129_1076226Not Available677Open in IMG/M
3300027838|Ga0209089_10020018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium4726Open in IMG/M
3300027838|Ga0209089_10134472All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium1498Open in IMG/M
3300027838|Ga0209089_10309655Not Available897Open in IMG/M
3300027839|Ga0209403_10000487All Organisms → cellular organisms → Bacteria59070Open in IMG/M
3300030729|Ga0308131_1074323Not Available702Open in IMG/M
3300031496|Ga0308130_1006978Not Available1661Open in IMG/M
3300031801|Ga0310121_10001374All Organisms → cellular organisms → Bacteria25055Open in IMG/M
3300031801|Ga0310121_10328876Not Available887Open in IMG/M
3300032006|Ga0310344_10880708Not Available756Open in IMG/M
3300032127|Ga0315305_1029025Not Available1424Open in IMG/M
3300032145|Ga0315304_1034583All Organisms → Viruses → Predicted Viral1339Open in IMG/M
3300032145|Ga0315304_1041096Not Available1231Open in IMG/M
3300032278|Ga0310345_10208582All Organisms → cellular organisms → Bacteria → Proteobacteria1775Open in IMG/M
3300032360|Ga0315334_10910277Not Available762Open in IMG/M
3300032820|Ga0310342_102021925All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium689Open in IMG/M
3300034679|Ga0315300_003402Not Available2562Open in IMG/M
3300034679|Ga0315300_009391Not Available1788Open in IMG/M
3300034679|Ga0315300_046865Not Available840Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine68.27%
Deep OceanEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean7.69%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater4.81%
Marine OceanicEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine Oceanic3.85%
SeawaterEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Seawater2.88%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine1.92%
Hydrothermal Vent FluidsEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids1.92%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface0.96%
MarineEnvironmental → Aquatic → Marine → Oceanic → Aphotic Zone → Marine0.96%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.96%
MarineEnvironmental → Aquatic → Marine → Coastal → Unclassified → Marine0.96%
SeawaterEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater0.96%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.96%
Diffuse Hydrothermal Flow Volcanic VentEnvironmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Diffuse Hydrothermal Flow Volcanic Vent0.96%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater0.96%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface0.96%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001739Marine viral communities from the Deep Pacific Ocean - MSP-121EnvironmentalOpen in IMG/M
3300002484Marine viral communities from the Pacific Ocean - ETNP_2_130EnvironmentalOpen in IMG/M
3300002511Marine viral communities from the Pacific Ocean - ETNP_2_1000EnvironmentalOpen in IMG/M
3300002760Marine viral communities from the Pacific Ocean - ETNP_6_1000EnvironmentalOpen in IMG/M
3300003542Diffuse hydrothermal flow volcanic vent microbial communities from Axial Seamount, northeast Pacific ocean - Sample FS900_Dependable_DNAEnvironmentalOpen in IMG/M
3300005398Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV201EnvironmentalOpen in IMG/M
3300005509Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV51EnvironmentalOpen in IMG/M
3300006310Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT229_3_0500mEnvironmentalOpen in IMG/M
3300006721Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S7 250_B metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006736Marine viral communities from the Subarctic Pacific Ocean - 1_ETSP_OMZ_AT15124 metaGEnvironmentalOpen in IMG/M
3300006738Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaGEnvironmentalOpen in IMG/M
3300006750Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaGEnvironmentalOpen in IMG/M
3300006751Marine viral communities from the Subarctic Pacific Ocean - 7_ETSP_OMZ_AT15161 metaGEnvironmentalOpen in IMG/M
3300006753Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaGEnvironmentalOpen in IMG/M
3300006789Marine viral communities from the Subarctic Pacific Ocean - 16_ETSP_OMZ_AT15313 metaGEnvironmentalOpen in IMG/M
3300006926Marine viral communities from the Subarctic Pacific Ocean - 18_ETSP_OMZAT15316 metaGEnvironmentalOpen in IMG/M
3300006927Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaGEnvironmentalOpen in IMG/M
3300006929Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaGEnvironmentalOpen in IMG/M
3300007512Marine water column microbial communities of the permanently stratified Cariaco Basin, Venezuela, November cruise - 247m, 250-2.7um, replicate bEnvironmentalOpen in IMG/M
3300007963Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (version 2)EnvironmentalOpen in IMG/M
3300008050Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaGEnvironmentalOpen in IMG/M
3300008216Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_GeostarEnvironmentalOpen in IMG/M
3300008219Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05EnvironmentalOpen in IMG/M
3300009173Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134EnvironmentalOpen in IMG/M
3300009488Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaGEnvironmentalOpen in IMG/M
3300009619Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250EnvironmentalOpen in IMG/M
3300009791Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3819_2500EnvironmentalOpen in IMG/M
3300010151Marine viral communities from the Subarctic Pacific Ocean - 22_ETSP_OMZ_AT15343 metaGEnvironmentalOpen in IMG/M
3300010155Marine viral communities from the Subarctic Pacific Ocean - 12_ETSP_OMZ_AT15267 metaGEnvironmentalOpen in IMG/M
3300011013Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 4SBTROV10_white metaGEnvironmentalOpen in IMG/M
3300017775Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 55 SPOT_SRF_2014-07-17EnvironmentalOpen in IMG/M
3300020423Marine microbial communities from Tara Oceans - TARA_B100000315 (ERX556027-ERR599062)EnvironmentalOpen in IMG/M
3300021345Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021348Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021355Metatranscriptome of ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021791Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmerEnvironmentalOpen in IMG/M
3300022225Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_400_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022227Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014_SV_150_PacBio MetaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300024520 (restricted)Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_1EnvironmentalOpen in IMG/M
3300025029Marine viral communities from the Pacific Ocean - LP-39 (SPAdes)EnvironmentalOpen in IMG/M
3300025038Marine viral communities from Cariaco Basin, Caribbean Sea - 24B_WHOI_OMZ_CsCl (SPAdes)EnvironmentalOpen in IMG/M
3300025042Marine viral communities from the Pacific Ocean - LP-47 (SPAdes)EnvironmentalOpen in IMG/M
3300025045Marine viral communities from the Pacific Ocean - LP-46 (SPAdes)EnvironmentalOpen in IMG/M
3300025046Marine viral communities from the Pacific Ocean - LP-45 (SPAdes)EnvironmentalOpen in IMG/M
3300025052Marine viral communities from the Pacific Ocean - LP-37 (SPAdes)EnvironmentalOpen in IMG/M
3300025097Marine viral communities from the Subarctic Pacific Ocean - 2_ETSP_OMZ_AT15125 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025109Marine viral communities from the Subarctic Pacific Ocean - 6_ETSP_OMZ_AT15160 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025112Marine viral communities from the Pacific Ocean - ETNP_2_130 (SPAdes)EnvironmentalOpen in IMG/M
3300025114Marine viral communities from the Subarctic Pacific Ocean - 3_ETSP_OMZ_AT15126 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025122Marine viral communities from the Pacific Ocean - ETNP_2_300 (SPAdes)EnvironmentalOpen in IMG/M
3300025125Marine viral communities from the Pacific Ocean - ETNP_2_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300025128Marine viral communities from the Subarctic Pacific Ocean - 4_ETSP_OMZ_AT15127 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025241Marine viral communities from the Deep Pacific Ocean - MSP-121 (SPAdes)EnvironmentalOpen in IMG/M
3300025251Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_906 (SPAdes)EnvironmentalOpen in IMG/M
3300025260Marine viral communities from the Deep Pacific Ocean - MSP112 (SPAdes)EnvironmentalOpen in IMG/M
3300025267Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_Geostar (SPAdes)EnvironmentalOpen in IMG/M
3300025873Marine viral communities from the Pacific Ocean - ETNP_6_1000 (SPAdes)EnvironmentalOpen in IMG/M
3300026115Marine viral communities from the Southern Atlantic ocean transect to study dissolved organic matter and carbon cycling - metaG 3827_250 (SPAdes)EnvironmentalOpen in IMG/M
3300026193Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306PF47B (SPAdes)EnvironmentalOpen in IMG/M
3300027838Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)EnvironmentalOpen in IMG/M
3300027839Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_86 (SPAdes)EnvironmentalOpen in IMG/M
3300030729Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1108_32.2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031496Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1105_33.1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031801Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986EnvironmentalOpen in IMG/M
3300032006Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-200_MGEnvironmentalOpen in IMG/M
3300032127Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB9_Tmax_529 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032145Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CBN3_1000m_313 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300032278Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300032360Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 500m 34915EnvironmentalOpen in IMG/M
3300032820Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - S1503-DNA-20-500_MGEnvironmentalOpen in IMG/M
3300034679Metatranscriptome of marine microbial communities from Western Arctic Ocean, Canada - CB21_1000m_1099 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI24658J20074_102202723300001739Deep OceanMAKSHSASGKVPENGLSFLEXATETPKDLGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR*
JGI25129J35166_101316823300002484MarineMVLRRLIMASKKHSADGKIPENGLSSLEHVASETPASLGMDSHGPNQMPMGIKKQKVSAPEGSFNFR*
JGI25131J35506_100202553300002511MarineMASNKHSADGKIPENGLSSLDKVTDTPKELGMDSHGPNQMPDGIKIKKVSTPEGSFTFR*
JGI25136J39404_100431423300002760MarineMAKSHSASGKVPENGLSFLETATETPKDLGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR*
JGI25136J39404_100452713300002760MarineMAKSHSASGKIPENGLSSLEKATETPKELGMDSHGPNQVPMGIVKKKVSSPGEGSF
JGI25136J39404_101667123300002760MarineMASNKHSADGKIPENGLSSLEKVTDTPKDLGMDSHGPNQMPDGIKKKKVSTPSEGSFQFR
JGI25136J39404_103129153300002760MarineSADGKIPENGLSSLDKVTDTPKELGMDSHGPNQMPDGIKIKKVSTPEGSFTFR*
JGI25136J39404_103885823300002760MarineMAKQSHSASGKIPENGLSSLETVASETPASLGMDSHGPNQMPDGIKKSKYSDPGKGSFQFR*
JGI25136J39404_108063423300002760MarineMASNKHSADGKIPENGLSSLEKVTDTPKDLGMDSHGPNQMPDGIKIKKVSTPSEGSFTFR
JGI25136J39404_109782323300002760MarineMAKQSHSASGKIPENGLSSLENVASETTASLGMDSHGPNQMPMGIAKKKYTSPGKGSF
JGI25136J39404_110526313300002760MarineHSASGKVPENGLSFLETATETPKDLGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR*
FS900DNA_1043656413300003542Diffuse Hydrothermal Flow Volcanic VentMASNKHSADGKIPENGLSSLDKVTDTPKEFGMDSHGPNQITDGIKIKKVSTPEGSFTFR*
Ga0066858_1013772623300005398MarineMTSNKHSADGKVPENGLSSLDKVSDTPKDLGMDSHGPNQMPDGIKKKKASTPEGSFNFR*
Ga0066827_1022010933300005509MarineKVPENGLSSLDKVSDTPKDLGMDSHGPNQMPDGIKKKKASTPEGSFNFR*
Ga0068471_103211323300006310MarineMAKSHSASGKVPENGLSSLETATETPKDLGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR*
Ga0079248_142656933300006721MarineMADKKHTAQGKVPENGMSFLEKTTEDVKQLGLDSHGPNQMPMGVVHKSISTDRGKFEFS
Ga0098033_101850723300006736MarineMASKKHSADGKIPENGLSSLEKVSDTPKELGMDSHGPNQMPDGIKIKKVSTPEGSFTFR*
Ga0098033_109676523300006736MarineMADKKHSAQGKVPENGMSFLEKSTEDTKQLALDSHGPNQMPIGVVHKSVSTPKGKFEFA*
Ga0098035_131151423300006738MarineMASKKHSADGKIPENGLSSLEKATEDPKQLGMDSHGPNQIPMGIVKKKVSTPSGSFNFR*
Ga0098058_101480323300006750MarineMASKKHSADGKIPENGLSSLEKATEDPKQLGMDSHGPNQMPMGIVKKKVSTPSGSFNFR*
Ga0098040_109541443300006751MarineMASNKHSADGKIPENGLSSLEKATEDPKQLGMDSHGPNQIPMGIVKKKVSTPSGSFNFR*
Ga0098039_110493623300006753MarineMASKKHSAQGKIPENGLSSLEMATEDPKQLGMDSHGPNQMPMGIKKEKVSTPEGSFNFR*
Ga0098039_112700713300006753MarineRRLIMASKKHSADGKIPENGLSSLEHVASETPASLGMDSHGPNQMPMGIKKQKVSTPSEGSFNFR*
Ga0098039_123924813300006753MarineHSADGKIPENGLSSLEKATEDPKQLGMDSHGPNQIPMGIVKKKVSTPSGSFNFR*
Ga0098039_128749123300006753MarineMASKKHSAQGKIPENGLSSLEHVASETPASLGMDSHGPNQVPMGIKKEKVSTPEGSFTFR
Ga0098054_119262433300006789MarineYIMTSNKHSADGKVPENGLSSLDKVSDTPKDLGMDSHGPNQMPDGIKKKKASTPEGSFNFR*
Ga0098057_113702113300006926MarineKHSADGKVPENGLSSLDKVSDTPKDLGMDSHGPNQMPDGIKKKKASTPEGSFNFR*
Ga0098034_106054333300006927MarineDKKHSAQGKVPENGMSFLEKSTEDTKQLALDSHGPNQMPIGVVHKSVSTPKGKFEFA*
Ga0098036_100371933300006929MarineMADKKHSAQGKVPENGMSFLEKTTEDTKQLGLDSHGPNQMPMGIVKKSISTPKGKFEFA*
Ga0105016_125833233300007512MarineMATKKHSAQGKIPENGLSSLEHVASETPASLGMDSHGPNQVPMGIKKEKVSTPEGSFT
Ga0110931_123701723300007963MarineMADKKHTAQGKVPENGMSFLEKATEDVKQLGLDSHGPNQMPMGVVHKSISTDRGKFEFS*
Ga0098052_125178623300008050MarineMVLGGNMASNKHSADGKIPENGLSSLEKATESPKELGMDSHGPNQMPMGIVKKKVSTPSEGSFNFR*
Ga0114898_102982023300008216Deep OceanMAKSHSASGKIPENGLSSLEKATETPKELGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR*
Ga0114898_115153623300008216Deep OceanMASNKHSADGKVPENGLSFLEKVSDTPKELGMDSHGPNQMPDGIKKSKYSSPNRGSFQFR
Ga0114905_121010233300008219Deep OceanSRIIMAKKSHSASGKVPENGLSSLETATETPKDLGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR*
Ga0114996_1001534853300009173MarineMASNKHSAQGKIPENGLSSLETATGDTKSLALDSHGPNQLPMGIKKEKVSTPSGSFNFR*
Ga0114996_1001637983300009173MarineMADKHSAQGKSPENGLSFLEKTTEDTKQLGLDSHGPNQMPMGIVKKSVSTSKGKFEFA*
Ga0114996_1007267743300009173MarineMASSKHSAQGKVPENGLSFLEKTTEDTKQLALDSHGPNQMPMGIVKKSVSTPKGKFEFA*
Ga0114925_1088453123300009488Deep SubsurfaceMAKSHSASGKVPENGLSSLETTTETPKDLGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR*
Ga0105236_104698813300009619Marine OceanicMVLGGIMASKKHTADGKIPENGLSSLDTVKDTPKELGMDSHGPNQMPDGIKKSKYSSPDR
Ga0105235_12105723300009791Marine OceanicMASNKHSADGKIPENGLSSLEKVSDTPKELGMDSHGPNQMPDGIKIKKVSTPEGSFTFR*
Ga0098061_103479753300010151MarineMVLRRSIMASKKHSADGKIPENGLSSLEKVSDTPKELGMDSHGPNQMPDGIKIKKVSTPEGSFTFR*
Ga0098047_1005892413300010155MarineMVLRRIKMADKKHSAQGKVPENGMSFLEKSTEDTKQLALDSHGPNQMPIGVVHKSVSTPKGKFEFA*
Ga0098047_1011805323300010155MarineMASNKHSAQGKIPENGLSSLETATGDTKSLALDSHGPNQMPMGIKKEKVSTPKGSFNFR*
Ga0098047_1024722023300010155MarineVVLKEAIMASKKHSAQGKIPENGLSSLEMATEDPKQLGMDSHGPNQMPMGIKKEKVSTPEGSFNFR*
Ga0114934_1016286033300011013Deep SubsurfaceMASKKHSAEGKVPENGLSSLEMATEDPKQLGMDSHGPNQVPMGIKKEKVSTPEGSFNFR*
Ga0181432_106916413300017775SeawaterMASNKHSADGKIPENGLSFLEKVSDTPAELGMDSHGPNQMPDGIKKKKVSSPSEGS
Ga0211525_1029421033300020423MarineMASKKHSADGKIPENGLSSLEKVSDTPKELGMDSHGPNQMPDGIKTKKVSTPEGSFTFR
Ga0206688_1009820413300021345SeawaterMSSNKHSAQGKIPENGLSSLETATGDTKSLALDSHGPNQLPMGIKKEKVSTPSGSFNFR
Ga0206695_168027743300021348SeawaterMSSNKHSAQGKIPENGLSSLETATGDTKSLALDSHGPNQLPMGIKKEKVSTPS
Ga0206690_1038124823300021355SeawaterMADKKHSAQGKVPENGMSFLEKTTEDVKQLGLDSHGPNQMPMGVVHKSISTPKGKFEFA
Ga0226832_1011044423300021791Hydrothermal Vent FluidsMAKKSHSASGKVPENGLSSLETATETPKDLGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR
Ga0226832_1048998323300021791Hydrothermal Vent FluidsMADKKHSAQGKVPENGLSFLEKATEDVKQLGLDSHGPNQMPMGVVHKSISTDRGKFEFS
Ga0187833_1004396623300022225SeawaterMTSNKHSADGKVPENGLSSLDKVSDTPKDLGMDSHGPNQMPDGIKKKKASTPEGSFNFR
Ga0187827_1069834813300022227SeawaterMASKKHSADGKIPENGLSSLEKVSDTPKELGMDSHGPNQMPDGIKIKKVSTPEGSFTFR
(restricted) Ga0255047_1007527143300024520SeawaterMASNKHSAQGKIPENGLSSLETATGDTKSLALDSHGPNQLPMGVKKEKVSTPSGSFNFR
Ga0207900_11563633300025029MarineDGKIPENGLSSLEKDTSTPKDLGMDSHGPNQVPMGIVKKKVSTPSEGSFNFR
Ga0208670_10557433300025038MarineMATKKHSAQGKIPENGLSSLEHVASETPASLGMDSHGPNQVPMGIKKEKVSTPEGSFTFR
Ga0207889_102001913300025042MarineMASNKHSADGKIPENGLSSLDKVTDTPKELGMDSHGPNQMPDGIKIKKVSTPEGSFTFR
Ga0207901_100364123300025045MarineMASNKHSADGKIPENGLSFLEKVTDTPKELGMDSHGPNQMPDGIKIKKVSTPSEGSFTFR
Ga0207902_100319933300025046MarineMAKSHSASGKVPENGLSSLETATETPKDLGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR
Ga0207902_102387523300025046MarineMASNKHSADGKIPENGLSSLEKDTSTPKDLGMDSHGPNQIPMGIVKKKVSTPSEGSFNFR
Ga0207906_101077023300025052MarineMASNKHSADGKIPENGLSSLEKDTSTPKDLGMDSHGPNQMPMGIAKKKVSTPSEGSFNFR
Ga0207906_101184913300025052MarineMASNKHSADGKIPENGLSFLEKVTDTPKELGMDSHGPNQMPDGIKKKKVSSPSEGSFQFR
Ga0208010_100551273300025097MarineMHTLKSNGTRRYIMTSNKHSADGKVPENGLSSLDKVSDTPKDLGMDSHGPNQMPDGIKKKKASTPEGSFNFR
Ga0208553_107589133300025109MarineMADKKHSAQGKVPENGMSFLEKSTEDTKQLALDSHGPNQMPIGVVHKSVSTPKGKFEFA
Ga0208553_109443423300025109MarineMASNKHSAQGKIPENGLSSLETATGDTKSLALDSHGPNQMPMGIKKEKVSTPKGSFNFR
Ga0209349_100341343300025112MarineMASKKHSADGKIPENGLSSLEHVASETPASLGMDSHGPNQMPMGIKKQKVSAPEGSFNFR
Ga0208433_113387913300025114MarineDKKHSAQGKVPENGMSFLEKSTEDTKQLALDSHGPNQMPIGVVHKSVSTPKGKFEFA
Ga0209434_109541243300025122MarineKHSADGKIPENGLSSLEKATESPKELGMDSHGPNQMPMGIAKKKVSTPSEGSFNFR
Ga0209644_100265643300025125MarineMASNKHSADGKIPENGLSSLDKVSDTPKELGMDSHGPNQMPDGIKKKKVSTPEGSFTFR
Ga0209644_102536443300025125MarineMASNKHSADGKIPENGLSSLDKVSDTPKELGMDSHGPNQMPDGIKKKKISTPALGSFQFR
Ga0209644_103767123300025125MarineMASNKHSADGKVPENGLSSLEKATEDPKQLGMDSHGPNQIPMGIVKKKVSTPSGSFNFR
Ga0209644_109592623300025125MarineMAKSHSASGKIPENGLSSLEKATETPKELGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR
Ga0208919_100874763300025128MarineMADKKHSAQGKVPENGMSFLEKTTEDTKQLGLDSHGPNQMPMGIVKKSISTPKGKFEFA
Ga0207893_105538913300025241Deep OceanNILVLRRLIMASNKHSADGKIPENGLSSLEKDTSTPKDLGMDSHGPNQLPMGIVKKKVSTPEGSFNFR
Ga0208182_100258883300025251Deep OceanMASNKHSADGKVPENGLSSLDKVSDTPKELGMDSHGPNQMPDGIKKKKVSTPSLGSFTFR
Ga0207895_101862153300025260Deep OceanGKVPENGLSFLETATETPKDLGMDSHGPNQVPMGIVKKKVSSPGEGSFQFR
Ga0208179_101339733300025267Deep OceanMASNKHSADGKIPENGLSSLEKDTSTPKDLGMDSHGPNQIPMGIAKKKVSTPSEGSFNFR
Ga0209757_1015603033300025873MarineMASKKHSADGKIPENGLSSLEHVASETPASLGMDSHGPNQMPMGIKKQKVSTPSEGSFNF
Ga0209757_1018462613300025873MarineMAKSHSASGKVPENGLSSLETATETPKDLGMDSHGPNQVPMGIVKKKVSSPGEGSF
Ga0209757_1023775923300025873MarineMASKKHTADGKIPENGLSSLEDATSTPKELGMDSHGPNQMPDGIKKEKYNSPDRGSFQFR
Ga0209757_1027946113300025873MarineLGGNMASNKHSADGKIPENGLSSLDKVTDTPKELGMDSHGPNQMPDGIKIKKVSTPEGSFTFR
Ga0208560_100499123300026115Marine OceanicMATNKHTADGKIPENGLSFLDKVSDTPKELGMDSHGPNQMPDGIKKSKYSSPDRGSFQFR
Ga0208560_100637153300026115Marine OceanicMATKKHSAQGKIPENGLSSLEHVASETPASLGMDSHGPNQMPMGIKKEKVSTPEGSFTFR
Ga0208129_107622613300026193MarineMASKKHSADGKIPENGLSSLEKVSDTPKELGMDSHGPNQMPDGIKIKKVSTPE
Ga0209089_1002001823300027838MarineMASSKHSAQGKVPENGLSFLEKTTEDTKQLALDSHGPNQMPMGIVKKSISTSKGKFEFA
Ga0209089_1013447233300027838MarineMADKHSAQGKSPENGLSFLEKTTEDTKQLGLDSHGPNQMPMGIVKKSVSTSKGKFEFA
Ga0209089_1030965523300027838MarineMASNKHSAQGKIPENGLSSLETATGDTKSLALDSHGPNQLPMGIKKEKVSTPSGSFNFR
Ga0209403_10000487303300027839MarineMASSKHSAQGKVPENGLSFLEKTTEDTKQLALDSHGPNQMPMGIVKKSVSTPKGKFEFA
Ga0308131_107432323300030729MarineMASSKHSAQGKVPENCLSFLEKTTEDTKQLALDSHGPNQMPMGIVKKSVSTPKGKFEFA
Ga0308130_100697823300031496MarineMASSKHSAQGKVPENGLSFLEKTTEDTKQLGLDSHGPNQMPMGIVKKSVSTSKGKFEFA
Ga0310121_10001374143300031801MarineMASNKHSADGKIPENGLSSLEKATESPKELGMDSHGPNQMPMGIVKKKVSTPSEGSFNFR
Ga0310121_1032887643300031801MarinePENGLSFLEKVTDTPKELGMDSHGPNQMPDGIKIKKVSTPSEGSFTFR
Ga0310344_1088070833300032006SeawaterMADKKHTAQGKVPENGMSFLEKATEDVKQLGLDSHGPNQMPMGVVHKSISTDRGKFEFS
Ga0315305_102902533300032127MarineMAEKKHSAQGKVPENGMSFLEKATEDTKQLALDSHGPNQMPIGVVHKSISTPKGKFEFA
Ga0315304_103458313300032145MarineMASNKHSADGKIPENGLSFLEKVTDTPKELGMDSHGPNQMPDGTKIKKVSTPSEGSFTF
Ga0315304_104109633300032145MarineMADKKHSAQGKVPENGMSFLEKATEDTKQLALDSHGPNQMPIGVVKKSVSTPKGTFEFA
Ga0310345_1020858233300032278SeawaterMASNKHSADGKIPENGLSSLDTVSDTPKELGMDSHGPNQMPDGVKKKKVSTPSLGSFQFR
Ga0315334_1091027733300032360SeawaterMASNKHSADGKIPENGLSFLEKVSDTPAELGMDSHGPNQMPDGIKKKKVSSPSEGSFQFR
Ga0310342_10202192523300032820SeawaterMASNKHSADGKIPENGLSSLDKVTDTPKELGMDSHGPNQMPDGIKKKKYSSPSLGSFQFR
Ga0315300_003402_2103_22883300034679MarineMKMADKKHSAQGKVPENGMSFLEKATEDTKQLALDSHGPNQMPIGVVHKSISTPKGKFEF
Ga0315300_009391_42_2273300034679MarineMNMADKKHSAQGKVPENGMSFLEKATEDTKQLALDSHGPNQMPIGVVHKSISTPKGKFEF
Ga0315300_046865_1_1773300034679MarineMASNKHSADGKIPENGLSFLEKVTDTPKELGMDSHGPNQMPDGIKIKKVSTPEGSFTFR


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