Metagenome / Metatranscriptome Family F097478

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F097478
Family Type	Metagenome / Metatranscriptome
Number of Sequences	104
Average Sequence Length	66 residues
Representative Sequence	MLHKISQMCDKVNVMYDKSMVLRRLKYDTPKDQRDDDQIDMLVQDIQALARDIANDQSPYTKL
Number of Associated Samples	83
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.90 %
% of genes near scaffold ends (potentially truncated)	28.85 %
% of genes from short scaffolds (< 2000 bps)	62.50 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.70

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (43.269 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (20.192 % of family members)
Environment Ontology (ENVO)	Unclassified (57.692 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (92.308 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.75% β-sheet: 0.00% Coil/Unstructured: 47.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.70
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.70
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF01258	zf-dskA_traR	8.65
PF00574	CLP_protease	8.65
PF01370	Epimerase	7.69
PF13759	2OG-FeII_Oxy_5	6.73
PF04820	Trp_halogenase	5.77
PF03796	DnaB_C	2.88
PF03407	Nucleotid_trans	2.88
PF02543	Carbam_trans_N	1.92
PF07733	DNA_pol3_alpha	0.96
PF07883	Cupin_2	0.96
PF16363	GDP_Man_Dehyd	0.96
PF03721	UDPG_MGDP_dh_N	0.96
PF01165	Ribosomal_S21	0.96
PF01050	MannoseP_isomer	0.96
PF14279	HNH_5	0.96
PF00383	dCMP_cyt_deam_1	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0616	Periplasmic serine protease, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	17.31
COG0740	ATP-dependent protease ClpP, protease subunit	Posttranslational modification, protein turnover, chaperones [O]	17.31
COG1030	Membrane-bound serine protease NfeD, ClpP class	Posttranslational modification, protein turnover, chaperones [O]	8.65
COG1734	RNA polymerase-binding transcription factor DksA	Transcription [K]	8.65
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	2.88
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	2.88
COG2192	Predicted carbamoyl transferase, NodU family	General function prediction only [R]	1.92
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.96
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.96
COG0677	UDP-N-acetyl-D-mannosaminuronate dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG0828	Ribosomal protein S21	Translation, ribosomal structure and biogenesis [J]	0.96
COG1004	UDP-glucose 6-dehydrogenase	Cell wall/membrane/envelope biogenesis [M]	0.96
COG1250	3-hydroxyacyl-CoA dehydrogenase	Lipid transport and metabolism [I]	0.96
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.96
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.58 %
Unclassified	root	N/A	39.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	44.23 %
Unclassified	root	N/A	39.42 %
Viruses	superkingdom	All Organisms → Viruses	16.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.27 %
Unclassified	root	N/A	39.42 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.35 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.46 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.35 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	33.65 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.35 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	0.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	29.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.35 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	29.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.35 %
Porticoccaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	29.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.35 %
unclassified Porticoccaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.42 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	29.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.35 %
Porticoccaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	0.96 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002482\|JGI25127J35165_1032228	All Organisms → Viruses → Predicted Viral	1197	Open in IMG/M
3300003409\|JGI26088J50261_1001832	Not Available	11146	Open in IMG/M
3300003476\|NAP2_1015737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1440	Open in IMG/M
3300003580\|JGI26260J51721_1038338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	808	Open in IMG/M
3300004097\|Ga0055584_100023247	Not Available	6084	Open in IMG/M
3300004097\|Ga0055584_101590664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	677	Open in IMG/M
3300004097\|Ga0055584_101883902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	615	Open in IMG/M
3300004448\|Ga0065861_1186072	Not Available	958	Open in IMG/M
3300004457\|Ga0066224_1222591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	550	Open in IMG/M
3300005510\|Ga0066825_10202071	Not Available	732	Open in IMG/M
3300005606\|Ga0066835_10027893	All Organisms → Viruses → Predicted Viral	1587	Open in IMG/M
3300005837\|Ga0078893_10347954	Not Available	5746	Open in IMG/M
3300005960\|Ga0066364_10000301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	11105	Open in IMG/M
3300006337\|Ga0068495_1155052	Not Available	672	Open in IMG/M
3300006350\|Ga0099954_1003605	All Organisms → Viruses → Predicted Viral	1294	Open in IMG/M
3300006752\|Ga0098048_1000063	Not Available	51189	Open in IMG/M
3300006925\|Ga0098050_1002178	Not Available	6600	Open in IMG/M
3300007114\|Ga0101668_1051966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	850	Open in IMG/M
3300009000\|Ga0102960_1084126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1162	Open in IMG/M
3300009071\|Ga0115566_10044820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Porticoccaceae → unclassified Porticoccaceae → Porticoccaceae bacterium	3044	Open in IMG/M
3300009437\|Ga0115556_1265478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	609	Open in IMG/M
3300009445\|Ga0115553_1244927	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	703	Open in IMG/M
3300009790\|Ga0115012_10207916	All Organisms → cellular organisms → Bacteria	1438	Open in IMG/M
3300012920\|Ga0160423_10001200	All Organisms → cellular organisms → Bacteria → Proteobacteria	21713	Open in IMG/M
3300012920\|Ga0160423_10011104	Not Available	7009	Open in IMG/M
3300012928\|Ga0163110_10056833	Not Available	2485	Open in IMG/M
3300012928\|Ga0163110_10179641	Not Available	1487	Open in IMG/M
3300012954\|Ga0163111_10001286	Not Available	15365	Open in IMG/M
3300013188\|Ga0116834_1010442	All Organisms → Viruses → Predicted Viral	1480	Open in IMG/M
3300013188\|Ga0116834_1057888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	741	Open in IMG/M
3300017719\|Ga0181390_1060897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1083	Open in IMG/M
3300017721\|Ga0181373_1049510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	765	Open in IMG/M
3300017724\|Ga0181388_1087874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	740	Open in IMG/M
3300017727\|Ga0181401_1060048	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1021	Open in IMG/M
3300017743\|Ga0181402_1140086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	615	Open in IMG/M
3300017756\|Ga0181382_1030056	All Organisms → Viruses → Predicted Viral	1648	Open in IMG/M
3300017758\|Ga0181409_1015869	All Organisms → Viruses → Predicted Viral	2463	Open in IMG/M
3300017762\|Ga0181422_1098344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	916	Open in IMG/M
3300017765\|Ga0181413_1004936	All Organisms → cellular organisms → Bacteria → Proteobacteria	4172	Open in IMG/M
3300017783\|Ga0181379_1079408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1220	Open in IMG/M
3300017818\|Ga0181565_10087469	Not Available	2217	Open in IMG/M
3300017818\|Ga0181565_10288237	Not Available	1105	Open in IMG/M
3300017824\|Ga0181552_10002745	Not Available	12758	Open in IMG/M
3300017824\|Ga0181552_10054838	Not Available	2326	Open in IMG/M
3300017949\|Ga0181584_10800293	Not Available	558	Open in IMG/M
3300017951\|Ga0181577_10811217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	563	Open in IMG/M
3300017956\|Ga0181580_10158419	All Organisms → Viruses → Predicted Viral	1616	Open in IMG/M
3300017958\|Ga0181582_10043114	All Organisms → Viruses → Predicted Viral	3456	Open in IMG/M
3300017969\|Ga0181585_10618850	Not Available	715	Open in IMG/M
3300017986\|Ga0181569_10557845	Not Available	769	Open in IMG/M
3300018036\|Ga0181600_10346261	Not Available	734	Open in IMG/M
3300018049\|Ga0181572_10036738	All Organisms → Viruses → Predicted Viral	3253	Open in IMG/M
3300018049\|Ga0181572_10311702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	998	Open in IMG/M
3300018416\|Ga0181553_10019328	Not Available	5092	Open in IMG/M
3300018416\|Ga0181553_10154467	Not Available	1362	Open in IMG/M
3300018418\|Ga0181567_10056073	All Organisms → Viruses → Predicted Viral	2757	Open in IMG/M
3300018426\|Ga0181566_10223496	Not Available	1385	Open in IMG/M
3300018895\|Ga0193547_10010060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	992	Open in IMG/M
3300018895\|Ga0193547_10017469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	750	Open in IMG/M
3300020175\|Ga0206124_10126481	Not Available	1043	Open in IMG/M
3300020266\|Ga0211519_1019442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1583	Open in IMG/M
3300020266\|Ga0211519_1065812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	678	Open in IMG/M
3300020276\|Ga0211509_1016248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1795	Open in IMG/M
3300020323\|Ga0211673_1002548	Not Available	5048	Open in IMG/M
3300020347\|Ga0211504_1040652	Not Available	1137	Open in IMG/M
3300020374\|Ga0211477_10260659	Not Available	592	Open in IMG/M
3300020377\|Ga0211647_10046641	All Organisms → Viruses → Predicted Viral	1607	Open in IMG/M
3300020385\|Ga0211677_10255043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	711	Open in IMG/M
3300020403\|Ga0211532_10274083	Not Available	655	Open in IMG/M
3300020413\|Ga0211516_10527779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	513	Open in IMG/M
3300020419\|Ga0211512_10167837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1013	Open in IMG/M
3300020438\|Ga0211576_10001602	Not Available	17104	Open in IMG/M
3300020438\|Ga0211576_10006032	Not Available	8078	Open in IMG/M
3300020442\|Ga0211559_10030280	Not Available	2708	Open in IMG/M
3300020448\|Ga0211638_10078769	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300020470\|Ga0211543_10435056	Not Available	627	Open in IMG/M
3300021335\|Ga0213867_1002770	All Organisms → cellular organisms → Bacteria → Proteobacteria	7676	Open in IMG/M
3300021335\|Ga0213867_1218115	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	627	Open in IMG/M
3300021347\|Ga0213862_10213494	Not Available	680	Open in IMG/M
3300021365\|Ga0206123_10195444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	902	Open in IMG/M
3300021368\|Ga0213860_10207252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	863	Open in IMG/M
3300021958\|Ga0222718_10021271	All Organisms → cellular organisms → Bacteria → Proteobacteria	4502	Open in IMG/M
3300021958\|Ga0222718_10030100	Not Available	3643	Open in IMG/M
3300021958\|Ga0222718_10072077	Not Available	2108	Open in IMG/M
3300021964\|Ga0222719_10581926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	655	Open in IMG/M
3300022176\|Ga0212031_1035435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	819	Open in IMG/M
3300022925\|Ga0255773_10035491	All Organisms → cellular organisms → Bacteria	3155	Open in IMG/M
3300023175\|Ga0255777_10190957	All Organisms → Viruses → Predicted Viral	1237	Open in IMG/M
3300023175\|Ga0255777_10350775	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10040254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2486	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10331702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	573	Open in IMG/M
3300024322\|Ga0228656_1025330	All Organisms → Viruses → Predicted Viral	1362	Open in IMG/M
3300025070\|Ga0208667_1001724	Not Available	7693	Open in IMG/M
3300025085\|Ga0208792_1016573	All Organisms → Viruses → Predicted Viral	1579	Open in IMG/M
3300025127\|Ga0209348_1027376	Not Available	2072	Open in IMG/M
3300025608\|Ga0209654_1001046	Not Available	23387	Open in IMG/M
3300025897\|Ga0209425_10189862	All Organisms → Viruses → Predicted Viral	1107	Open in IMG/M
3300026453\|Ga0228644_1007601	Not Available	2486	Open in IMG/M
3300031519\|Ga0307488_10000748	Not Available	27004	Open in IMG/M
3300031519\|Ga0307488_10025054	All Organisms → Viruses → Predicted Viral	4782	Open in IMG/M
3300031519\|Ga0307488_10523763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	703	Open in IMG/M
3300031621\|Ga0302114_10027063	All Organisms → Viruses → Predicted Viral	2994	Open in IMG/M
3300031621\|Ga0302114_10033141	All Organisms → cellular organisms → Bacteria	2649	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.04%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	0.96%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	23.08%
Unclassified	Environmental → Aquatic → Marine → Unclassified	22.12%
Oceanic	Environmental → Aquatic → Marine → Oceanic	20.19%
Coastal	Environmental → Aquatic → Marine → Coastal	12.50%
Strait	Environmental → Aquatic → Marine → Strait	8.65%
Pelagic	Environmental → Aquatic → Marine → Pelagic	4.81%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.81%
Inlet	Environmental → Aquatic → Marine → Inlet	1.92%
Volcanic	Environmental → Aquatic → Marine → Volcanic	0.96%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	22.12%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	20.19%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	13.46%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	12.50%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.65%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	6.73%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.81%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.88%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.92%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	20.19%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	18.27%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	13.46%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.65%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	5.77%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	4.81%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	3.85%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	3.85%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	2.88%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.88%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	2.88%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.92%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.92%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.92%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.92%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	0.96%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.96%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	0.96%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	0.96%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002482	Marine viral communities from the Pacific Ocean - ETNP_2_30	Environmental	Open in IMG/M
3300003409	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA	Environmental	Open in IMG/M
3300003476	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 2	Environmental	Open in IMG/M
3300003580	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300005510	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201306SV45	Environmental	Open in IMG/M
3300005606	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302SV84	Environmental	Open in IMG/M
3300005837	Exploring phylogenetic diversity in Port Hacking ocean in Sydney, Australia - Port Hacking PH4 TJ4-TJ18	Environmental	Open in IMG/M
3300005960	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_A	Environmental	Open in IMG/M
3300006337	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT237_3_0025m	Environmental	Open in IMG/M
3300006350	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0075m	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006925	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG	Environmental	Open in IMG/M
3300007114	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble', waterEBis4	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009445	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110331	Environmental	Open in IMG/M
3300009790	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT10 Metagenome	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300013188	Marine hypoxic microbial communities from the Gulf of Mexico, USA - 6m_Station1_GOM_Metagenome	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017721	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_09 viral metaG	Environmental	Open in IMG/M
3300017724	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 11 SPOT_SRF_2010-05-17	Environmental	Open in IMG/M
3300017727	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 24 SPOT_SRF_2011-07-20	Environmental	Open in IMG/M
3300017743	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 25 SPOT_SRF_2011-08-17	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018036	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)	Environmental	Open in IMG/M
3300018049	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018416	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018895	Metatranscriptome of marine prokaryotic communities collected during Tara Oceans survey from station TARA_011 - TARA_X100000009 (ERX1408504-ERR1336912)	Environmental	Open in IMG/M
3300020175	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160321_2	Environmental	Open in IMG/M
3300020266	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX556082-ERR598951)	Environmental	Open in IMG/M
3300020276	Marine microbial communities from Tara Oceans - TARA_E500000075 (ERX289007-ERR315858)	Environmental	Open in IMG/M
3300020323	Marine microbial communities from Tara Oceans - TARA_B100001027 (ERX555979-ERR599120)	Environmental	Open in IMG/M
3300020347	Marine microbial communities from Tara Oceans - TARA_B100000497 (ERX556109-ERR598994)	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300021347	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO266	Environmental	Open in IMG/M
3300021365	Pelagic subsurface seawater microbial communities from Kabeltonne, Helgoland, North Sea - Helgoland_Spring_Bloom_20160316_1	Environmental	Open in IMG/M
3300021368	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO550	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022176	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)	Environmental	Open in IMG/M
3300022925	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011502XT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300024322	Seawater microbial communities from Monterey Bay, California, United States - 68D	Environmental	Open in IMG/M
3300025070	Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaG (SPAdes)	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025127	Marine viral communities from the Pacific Ocean - ETNP_2_30 (SPAdes)	Environmental	Open in IMG/M
3300025608	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - ESP_161SG_22_DNA (SPAdes)	Environmental	Open in IMG/M
3300025897	Pelagic Microbial community sample from North Sea - COGITO 998_met_05 (SPAdes)	Environmental	Open in IMG/M
3300026453	Seawater microbial communities from Monterey Bay, California, United States - 56D	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25127J35165_10322283	3300002482	Marine	PDEDNMIHKISQMCDKVNVIYEKSMHLRRLKYDTPKDQQNKTEIDFYVQDIQALCREIANDTQKYRKVDQDADRN*
JGI26088J50261_10018328	3300003409	Marine	MNHKISDLCKKVNVMYEMSCNLRRLKYDIPKQSRTREETAQIDWLITDIQSLARDIANDTQPYNKVKTDNA*
NAP2_10157372	3300003476	Estuarine	MNITKGWEMIHKISQMCDKVSVIYNKSMELRRLKYDTPKESRDENQINFLVQDIQALCREIANDTTTYTKT*
JGI26260J51721_10383382	3300003580	Marine	MLHKISQLCDKVNVMYTKSMNLRRLKYDIPKGNRTNEQDHQIDELVQDIQALARDIANDRQMYEKTK*
Ga0055584_1000232479	3300004097	Pelagic Marine	MLHKISQLCDKVNVMYSKSMNLRRLKYDIPKRNRTNEQEHQIDELIQDIQALARDIANDRQAYEKTE*
Ga0055584_1015906641	3300004097	Pelagic Marine	MLHKISDMCDKVTVMYERSMNLRRLKYDTPKENQNKNEIDMLVADIQALARDIGNDTMPYQKLDD*
Ga0055584_1018839021	3300004097	Pelagic Marine	MLHKISDMCDKVTVMYERSMNLRRLKYDTPKENQNKNEIDMLVADIQALARDIANDTMPYEKK*
Ga0065861_11860722	3300004448	Marine	MLHKISQLCDKVNVMYTKSMNLRRLKYDIPKGNRTVEQEQQIDELVQDIQALARDIANDRQTYEKTE*
Ga0066224_12225912	3300004457	Marine	MLHKISQLCDKVNVMYTKSMNLRRLKYDIPKGNRTVEQEQQIDELVQDIQALARDIANDRQTYEKT
Ga0066825_102020711	3300005510	Marine	MIHKISQMCDKVNVIYEKSMHLRRLKYDTPKDQQNKTEIDFYVQDIQALCREIANDTQKYRKVDQDADRN*
Ga0066835_100278933	3300005606	Marine	MIHKISQMCDKVNVIYEKSMQLRRLKYDTPKDQQNKNEIDYFVQDIQALCREIANDTQKYRKVDQDADRN*
Ga0078893_1034795413	3300005837	Marine Surface Water	MIHKISQMCDKVNVIYEKSMHLRRLKYDTPKDQQNKNEIDFYVQDIQALCREIANDTQKYRKVDQDADRN*
Ga0066364_1000030122	3300005960	Marine	VQHKISQMCDKVSVIYEKSMNLRRLKYDTPKEKQNKDEIDYLVQDIQALCREIAYDTGKYKRVGQDDN*
Ga0068495_11550522	3300006337	Marine	VQHKISQMCDKVSVIYEKSMNLRRLKYDTPKEKQNKDEIDYLVQDIQALCREIAYDTGKYKRVGQDDN*YHR
Ga0099954_10036051	3300006350	Marine	MCDKVSVIYEKSMNLRRLKYDTPKEKQNKDEIDYLVQDIQALCREIAYDTGKYKRVGQDDN*
Ga0098048_100006354	3300006752	Marine	MLHKISQLCDKVSVMYNKSMNLRRLKYDIPKGDRTNEQEHLINELVQDIQALARDIANDRQMYEKTK*
Ga0098050_100217812	3300006925	Marine	RLLMLHKISQLCDKVSVMYNKSMNLRRLKYDIPKGDRTNEQEHLINELVQDIQALARDIANDRQMYEKTK*
Ga0101668_10519661	3300007114	Volcanic Co2 Seep Seawater	KISQMCDKVNVIYEKSMHLRRLKYDTPKDQQNKNEIDFYVQDIKALCREITNDTQKYRKVDQDADRN*
Ga0102960_10841262	3300009000	Pond Water	LTLYTDVLYLKSKEENMLHKVSQMCDKISVMYEKSMNLRRMKYDTPKEDQDTYQIDILIEDIQALARDIANDTQPYQK*
Ga0115566_100448203	3300009071	Pelagic Marine	MLHKISQMCDKVNVMYDKSMVLRRLKYDTPKDQRDNDQIDMLVQDIQALARDIANDQSPYTKLDD*
Ga0115556_12654782	3300009437	Pelagic Marine	MLHKISQMCDKVNVMYDKSMVLRRLKYDTPKDQRDNDQIDMLVQDIQALARDIANDQLPYTKLDD*
Ga0115553_12449273	3300009445	Pelagic Marine	SQLCDKVNVMYSKSMNLRRLKYDIPKRNRTNEQEHQIDELIQDIQALARDIANDRQAYEKTE*
Ga0115012_102079162	3300009790	Marine	MCDKVNVIYEKSMHLRRLKYDTPKDQQNKNEIDFYVQDIQALCREIANDTQKYRKVDQDADRN*
Ga0160423_1000120024	3300012920	Surface Seawater	MLHKISQMCDKVSVMYEKSMVLRRLKYDTPKERQDKDQIDMMVQDIQALARDIANDKQPYVKLDD*
Ga0160423_100111042	3300012920	Surface Seawater	MLHKISDLCDKVSVMYEKSMNLRRLKYDKPKESRSREENAQIDWLVEDIQALARDIANDTQAYSKHIDDK*
Ga0163110_100568332	3300012928	Surface Seawater	MCDKVNVIYEKSMHLRRLKYDTPKDQQNKTEIDFYVQDIQALCREIANDTQKYRKVDQDADRN*
Ga0163110_101796413	3300012928	Surface Seawater	MCDKVNVIYEKSMQLRRLKYDTPKDQQNKNEIDYFVQDIQALCREIANDTQKYRKVDQDADRN*
Ga0163111_1000128621	3300012954	Surface Seawater	MCDKVNVMYTKSMNLRRLKYDIPKATRTKEEEFHINELVQDIQALAMDIANDRQPYDKK*
Ga0116834_10104423	3300013188	Marine	MCDKVNVMYTKSMNLRRLKYDIPKDSRSKEQEYQINELVQDIQALAMDIANDRQPYDKK*
Ga0116834_10578882	3300013188	Marine	MNITKGWEMIHKISQMCDKVSVIYNKSMELRRMKYDTPKESRDENQINFLVQDIQALCREIANGTTTYTKT*
Ga0181390_10608972	3300017719	Seawater	MLHKISQMCDKVSVMYDKSMLLRRLKYDTPKAQRDNDQIDMLIQDIQALARDIANDQSPYIKLDD
Ga0181373_10495103	3300017721	Marine	MLHKISQLCDKVNVMYDKSMNLRRLKYDIPKGDRTNEQEHLINELVQDIQ
Ga0181388_10878742	3300017724	Seawater	MLHKISQMCDKVSVMYDKSMLLRRLKYDTPKDQRDNDQIDMLIQDIQALARDIANDQSPYVKLDD
Ga0181401_10600482	3300017727	Seawater	MLHKISQMCDKVNVMYDKSMLLRRLKYDTPKAQRDNDQIDMLIQDIQALARDIANDQSPYIKLDD
Ga0181402_11400863	3300017743	Seawater	MLHKISQMCDKVNVMYNKSMALRRLKYDTPKSQRDNDQIDMLIQDIQALARDIANDQSPYVKLDD
Ga0181382_10300565	3300017756	Seawater	LLMLHKISQLCDKINVMYNKSMNLRRLKYDIPKRNRTKEQDHQIDELVQDIQALARDIANDRQMYEKTK
Ga0181409_10158691	3300017758	Seawater	SQMCDKVSVMYDKSMLLRRLKYDTPKDQRDNDQIDMLVQDIQALARDIANDQSPYIKLDD
Ga0181422_10983442	3300017762	Seawater	MLHKISQMCDKVSVMYDKSMLLRRLKYDTPKDQRDNDQIDMLIQDIQALARDIANDQSPYIKLDD
Ga0181413_10049362	3300017765	Seawater	MLHKISQMCDKVSVMYDKSMLLRRLKYDTPKDQRDNDQIDMLVQDIQALARDIANDQSPYVKLDD
Ga0181379_10794083	3300017783	Seawater	MLHKISQMCDKVNVMYNKSMALRRLKYDTPKSQRDNDQIDMLIQDIQALARDIANDQSPYIKLDD
Ga0181565_100874692	3300017818	Salt Marsh	MLHKISEMCDKVSVMYDKSMNLRRLKYDLPKEQQDQNTIQFLIDDIQQLAREIANDRGQYQKHDD
Ga0181565_102882372	3300017818	Salt Marsh	MNITKGWEMIHKISQMCDKVSVIYNKSMELRRMKYDTPKESRDENQINFLVQDIQALCREIANDTTTYTKT
Ga0181552_1000274510	3300017824	Salt Marsh	MLHKISQMCDKVNVMYTKSMNLRRLKYDIPKENRTKEEEYHINELVQDIQALAMDIANDRQPYDKK
Ga0181552_100548384	3300017824	Salt Marsh	MLHKISQMCDKVSVMYEKSMVLRRLKYDTPKEKQDKGQIDMMVQDIQALARDIANDKQPYVKLDD
Ga0181584_108002932	3300017949	Salt Marsh	MQHKISAMCDKVNVMYQKAMNLRRLKYDKPKHVRTPEEENEINVLVYDIQALASDIANDRQPYSKY
Ga0181577_108112172	3300017951	Salt Marsh	MLHKISEMRDKVSVMYDKSMNLRRLKYDLPKEQQDQNTIQFLIDDIQQLAREIANDRGQYQKHDD
Ga0181580_101584196	3300017956	Salt Marsh	IQGDLMQHKISAMCDKVNVMYQKAMNLRRLKYDKPKHVRTPEEENEINVLVYDIQALASDIANDRQPYSKY
Ga0181582_100431147	3300017958	Salt Marsh	MQHKISAMCDKVNVMYQKAMNLRRLKYDKPKHVRTPEEENEINVLVYDIQALASDIANDRQPYSK
Ga0181585_106188504	3300017969	Salt Marsh	GPSLYCCRRHDIQGDLMQHKISAMCDKVNVMYQKAMNLRRLKYDKPKHVRTPEEENEINVLVYDIQALASDIANDRQPYSKY
Ga0181585_108448831	3300017969	Salt Marsh	HKISEMCDKVSVMYDKSMNLRRLKYDLPKEQQDQNTIQFLIDDIQQLAREIANDRGQYQKHDD
Ga0181569_105578452	3300017986	Salt Marsh	MLHKISQMCDKVNVMYTKSMNLRRLKYDIPKDSRSKEQEYQINELVQDIQALAMDIANDRQPYDKK
Ga0181600_103462611	3300018036	Salt Marsh	LHKISQMCDKVNVMYTKSMNLRRLKYDIPKENRTKEQEYHINELVQDIQALAMDIANDRQPYDKK
Ga0181572_100367384	3300018049	Salt Marsh	MIHKISQMCDKVSVIYNKSMELRRMKYDTPKESRDENQINFLVQDIQALCREIANDTTTYTKT
Ga0181572_103117021	3300018049	Salt Marsh	MMQHKISAMCDKVSVMYEKSMTLRRLKYDKPKESRTSEENFMIDALVEDIQALAGDLYNDRA
Ga0181553_100193289	3300018416	Salt Marsh	MLHKISQMCDKVNVMYTKSMNLRRLKYDIPKENRTKEQEYHINELVQDIQALAMDIANDRQPYDKK
Ga0181553_101544671	3300018416	Salt Marsh	TKGWEMIHKISQMCDKVSVIYNKSMELRRMKYDTPKESRDENQINFLVQDIQALCREIANDTTTYTKT
Ga0181567_100560734	3300018418	Salt Marsh	MIHKISQMCDKVSVIYNKSMELRRMKYDTPKESRDENQINFLIQDIQALCREIANDTTTYTKT
Ga0181566_102234965	3300018426	Salt Marsh	YGPSLYCCRRHDIQGDLMQHKISAMCDKVNVMYQKAMNLRRLKYDKPKHVRTPEEENEINVLVYDIQALASDIANDRQPYSKY
Ga0193547_100100602	3300018895	Marine	MIHKISQMCDKVSVIYNKSMELRRLKYDTPKESRDENQINFLVQDIQALCREIANDTTTYTKT
Ga0193547_100174692	3300018895	Marine	MNITKGWEMIHKISQMCDKVSVIYNKSMELRRLKYDTPKESRDENQINFLVQDIQALCREIANDTTTYTKT
Ga0206124_101264813	3300020175	Seawater	MLHKISQLCDKVNVMYSKSMNLRRLKYGVPKRNRTNEQEHQIDELIQDIQALARDIANDRQAYEKTE
Ga0211519_10194422	3300020266	Marine	MLHKISQMCDRIKVMYEKSEELRRLKYDVPKEEQKQYEIDELVLDIQALARSIANDTMPYNKLND
Ga0211519_10658122	3300020266	Marine	MLHKISQMCDKVNVMYTKSMNLRRLKYDIPKATRTKEEEFHINELVQDIQALAMDIANDRQPYDKK
Ga0211509_10162481	3300020276	Marine	MLHKISQMCDKVNVMYNKSMELRRLKYDTPKAQRDNDQIDMLVQDIQALARDIANDTSPYVKLDD
Ga0211673_10025485	3300020323	Marine	VQHKISQMCDKVSVIYEKSMNLRRLKYDTPKEKQNKDTIDYLVQDIQALCREIAYDTGKYKRVGQDDN
Ga0211504_10406522	3300020347	Marine	MLHKISQLCDKVNVMYDKSMNLRRLKYDIPKGDRTNEQEHLINELVQDIQALARDIANDRQMYEKTK
Ga0211477_102606592	3300020374	Marine	VQHKISQMCDKVSVIYEKSMNLRRLKYDTPKEKQNKDEIDYLVQDIQALCREIAYDTGKYKRVGQDDN
Ga0211647_100466413	3300020377	Marine	MIHKISQMCDKVNVIYEKSMQLRRLKYDTPKDQQNKNEIDYFVQDIQALCREIANDTQKYRKVDQDADRN
Ga0211677_102550432	3300020385	Marine	MLHKISQLCDKINVMYDKSMNLRRLKYDIPKGDRTNEQEHLIDELVQDIQALARDIANDRQMYEKTK
Ga0211532_102740831	3300020403	Marine	MIHKISQMCDKVNVIYEKSMHLRRLKYDTPKDQQNKNEIDFYVQDIQALCREIANDTQ
Ga0211516_105277791	3300020413	Marine	VIHKISEMCDKVSVIYAKSMELRRAKYDTPKAKQDKNHIDYLIQDIQALCREIANDTSKYKKKS
Ga0211512_101678371	3300020419	Marine	CDKVSVIYEKSMNLRRLKYDTPKEKQNKDEIDYLVQDIQALCREIAYDTGKYKRVGQDDN
Ga0211576_1000160211	3300020438	Marine	MLHKISQMCDKVSVMYDKSMLLRRLKYDTPKDQRDNDQIDMLVQDIQALARDIANDQSPYIKLDD
Ga0211576_100060326	3300020438	Marine	MLHKISQLCDKINVMYNKSMNLRRLKYDIPKRNRTKEQDHQIDELVQDIQALARDIANDRQMYEKTK
Ga0211559_100302804	3300020442	Marine	MLHKISDLCDKVSVMYEKSMNLRRLKYDKPKESRSREENAQIDWLVEDIQALARDIANDTQAYSKHIDDK
Ga0211638_100787693	3300020448	Marine	MCDKVSVIYEKSMNLRRLKYDTPKEKQNKDEIDYLVQDIQALCREIAYDTGKYKRVGQDD
Ga0211543_104350562	3300020470	Marine	MIHKISQMCDKVNVIYEKSMHLRRLKYDTPKDQQNKNEIDFYVQDIQALCREIANDTQKY
Ga0213867_100277010	3300021335	Seawater	MLHKISQMCDKVSVMYEKSMVLRRLKYDTPKDRQDKVQIDIMVQDIQALARDIANDKQPYVKLDD
Ga0213867_12181152	3300021335	Seawater	MLHKISQLCDKVNVMYSKSMNLRRLKYDIPKRNRTNEQEHQIDELIQDIQALARDIANDRQAYEKTE
Ga0213862_102134941	3300021347	Seawater	MLHKISQMCDKVNVMYTKSMNLRRLKYDIPKDSRSKEQEYQINELVQDIQALA
Ga0206123_101954441	3300021365	Seawater	MLHKISQMCDKVNVMYDKSMVLRRLKYDTPKDQRDDDQIDMLVQDIQALARDIANDQSPYTKL
Ga0213860_102072522	3300021368	Seawater	MIHKISQMCDKVNVIYEKSMHLRRLKYDTPKDQQNKNEIDFYVQDIQALCREIANDTQKYRKVDQDADRN
Ga0222718_100212712	3300021958	Estuarine Water	MLHKISDMCDKVTVMYERSMNLRRLKYDTPKENQNKNEIDMLVADIQALARDIGNDTMPYQKLDD
Ga0222718_100301006	3300021958	Estuarine Water	MLHKISQMCDKISVMYEKSMNLRRMKYDTPKEDQDTYQIDILIEDIQALARDIANDTQPYQK
Ga0222718_100720771	3300021958	Estuarine Water	MLHKISDMCDKVTVMYERSMNLRRLKYDTPKENQNKNEIDMLVADIQALARDIGNDTMPYEKLDD
Ga0222719_105819262	3300021964	Estuarine Water	MLHKISQMCDKITVMYEKSMNLRRMKYDVPKEQQNKQLIDELVADIQALARDIAHDTSPYQKLKDND
Ga0212031_10354353	3300022176	Aqueous	MLHKISQLCDKVNVMYQRSVNLRKLKYDIPKEVRTPEQEMQINMLVDDIQALARDIAYDRLPYAKDTEKDNS
Ga0255773_100354911	3300022925	Salt Marsh	MLHKISQMCDKVSVMYEKSMVLRRLKYDTPKEKQDKGQIDMMVQDIQALARDIANDK
Ga0255777_101909571	3300023175	Salt Marsh	QHKISAMCDKVNVMYQKAMNLRRLKYDKPKHVRTPEEENEINVLVYDIQALASDIANDRQPYSKY
Ga0255777_103507751	3300023175	Salt Marsh	MIHKISQMCDKVSVIYNKSMELRRMKYDTPKESRDENQINFLIQDIQALCREIANDTTT
(restricted) Ga0233438_100402544	3300024255	Seawater	MLHKISQLCDKVNVMYTKSMNLRRLKYDIPKGNRTNEQDHQIDELVQDIQALARDIANDRQMYEKTK
(restricted) Ga0233438_103317023	3300024255	Seawater	MLHKISQMCDKVSVMYDKSMLLRRLKYDTPKGQQDTNQIDMLVQDIQALARDIANDQSPYIKLDD
Ga0228656_10253304	3300024322	Seawater	MLHKISQLCDKINVMYNKSMNLRRLKYDIPKRNRTKEQDHQIDELVQDIQALARDIANDRQMY
Ga0208667_100172410	3300025070	Marine	MLHKISQLCDKVSVMYNKSMNLRRLKYDIPKGDRTNEQEHLINELVQDIQALARDIANDRQMYEKTK
Ga0208792_10165736	3300025085	Marine	RLLMLHKISQLCDKVSVMYNKSMNLRRLKYDIPKGDRTNEQEHLINELVQDIQALARDIANDRQMYEKTK
Ga0209348_10273762	3300025127	Marine	MIHKISQMCDKVNVIYEKSMHLRRLKYDTPKDQQNKTEIDFYVQDIQALCREIANDTQKYRKVDQDADRN
Ga0209654_100104622	3300025608	Marine	MNHKISDLCKKVNVMYEMSCNLRRLKYDIPKQSRTREETAQIDWLITDIQSLARDIANDTQPYNKVKTDNA
Ga0209425_101898624	3300025897	Pelagic Marine	LMLHKISQLCDKVNVMYSKSMNLRRLKYDIPKRNRTNEQEHQIDELIQDIQALARDIANDRQAYEKTE
Ga0228644_10076018	3300026453	Seawater	CDKINVMYNKSMNLRRLKYDIPKRNRTKEQDHQIDELVQDIQALARDIANDRQMYEKTK
Ga0307488_1000074829	3300031519	Sackhole Brine	MLHKISQMCDKVNVMYDKSMVLRRLKYDIPKDQQDTNAIDMLVDDIQALARDIAHDQLPYIKLDD
Ga0307488_100250549	3300031519	Sackhole Brine	MLHKISQLCDKVNVMYTKSMNLRRLKYDIPKGNRTVEQEQQIDELVQDIQALARDIANDRQTYEKTE
Ga0307488_105237632	3300031519	Sackhole Brine	MLHKISDMCDKVTVMYERSMNLRRLKYDTPKENQNKNEIDMLVADIQELARDIGNDTMPYQKLDD
Ga0302114_100270638	3300031621	Marine	QLCDKVNVMYTKSMNLRRLKYDIPKGNRTVEQEQQIDELVQDIQALARDIANDRQTYEKT
Ga0302114_100331417	3300031621	Marine	MLHKISQLCDKVNVMYTKSMNLRRLKYDIPKGNRTVEQEQQIDELVQEIQA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters