Metagenome Family F097428

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F097428
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	82 residues
Representative Sequence	MDSSQTEQAILARFKERCHRAGGVQVGYGMRAQAIRLAQPRGADVDSALSAMVEKGWLKMNAAGTWYFLTADGAERVKAA
Number of Associated Samples	80
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.92 %
% of genes near scaffold ends (potentially truncated)	23.08 %
% of genes from short scaffolds (< 2000 bps)	69.23 %
Associated GOLD sequencing projects	75
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.76

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (99.038 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (16.346 % of family members)
Environment Ontology (ENVO)	Unclassified (31.731 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.077 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 40.74% β-sheet: 9.26% Coil/Unstructured: 50.00%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.76
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.76
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.4.5.28: MarR-like transcriptional regulators	d2frha2	2frh	0.71263
a.4.5.71: ReutB4095-like	d2obpa1	2obp	0.70918
a.4.5.0: automated matches	d4hqma_	4hqm	0.7062
a.4.5.56: Rio2 serine protein kinase N-terminal domain	d1tqia1	1tqi	0.70371
a.4.5.48: F93-like	d2co5a1	2co5	0.70291

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF00528	BPD_transp_1	20.19
PF03167	UDG	20.19
PF04069	OpuAC	6.73
PF10518	TAT_signal	5.77
PF04014	MazE_antitoxin	4.81
PF01966	HD	3.85
PF00334	NDK	3.85
PF03576	Peptidase_S58	2.88
PF13676	TIR_2	0.96
PF13487	HD_5	0.96
PF12704	MacB_PCD	0.96
PF02629	CoA_binding	0.96
PF01850	PIN	0.96
PF00005	ABC_tran	0.96
PF09107	SelB-wing_3	0.96
PF04542	Sigma70_r2	0.96
PF02910	Succ_DH_flav_C	0.96
PF02239	Cytochrom_D1	0.96
PF01979	Amidohydro_1	0.96
PF01127	Sdh_cyt	0.96
PF12627	PolyA_pol_RNAbd	0.96
PF00188	CAP	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	20.19
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	20.19
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	20.19
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	5.77
COG0105	Nucleoside diphosphate kinase	Nucleotide transport and metabolism [F]	3.85
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.96
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.96
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.96
COG2009	Succinate dehydrogenase/fumarate reductase, cytochrome b subunit	Energy production and conversion [C]	0.96
COG2142	Succinate dehydrogenase, hydrophobic anchor subunit	Energy production and conversion [C]	0.96
COG2340	Spore germination protein YkwD and related proteins with CAP (CSP/antigen 5/PR1) domain	Cell cycle control, cell division, chromosome partitioning [D]	0.96
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.04 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	53.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.85 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	53.85 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.85 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.85 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.85 %
Lysobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
Unclassified	root	N/A	0.96 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	53.85 %
Lysobacter defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter defluvii	0.96 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.96 %
Unclassified	root	N/A	0.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_116887535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300002568\|C688J35102_120287209	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300004071\|Ga0055486_10055580	All Organisms → cellular organisms → Bacteria	807	Open in IMG/M
3300004157\|Ga0062590_100296275	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300004781\|Ga0062379_10000157	All Organisms → cellular organisms → Bacteria	12622	Open in IMG/M
3300005093\|Ga0062594_102715467	Not Available	548	Open in IMG/M
3300005353\|Ga0070669_100000046	All Organisms → cellular organisms → Bacteria	119919	Open in IMG/M
3300005353\|Ga0070669_101335483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005354\|Ga0070675_100720747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	909	Open in IMG/M
3300005367\|Ga0070667_100427050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300005466\|Ga0070685_10394706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300005544\|Ga0070686_101027073	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	677	Open in IMG/M
3300005587\|Ga0066654_10002087	All Organisms → cellular organisms → Bacteria	6372	Open in IMG/M
3300005617\|Ga0068859_101321031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300005844\|Ga0068862_100006315	All Organisms → cellular organisms → Bacteria	9854	Open in IMG/M
3300006358\|Ga0068871_101032000	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300006844\|Ga0075428_100714170	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300006844\|Ga0075428_100766075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1026	Open in IMG/M
3300006852\|Ga0075433_10426426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1169	Open in IMG/M
3300006854\|Ga0075425_100050516	All Organisms → cellular organisms → Bacteria → Proteobacteria	4656	Open in IMG/M
3300006854\|Ga0075425_100377798	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M
3300006854\|Ga0075425_100687115	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300006854\|Ga0075425_101330845	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300006871\|Ga0075434_100201485	All Organisms → cellular organisms → Bacteria	2010	Open in IMG/M
3300006871\|Ga0075434_101448406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696	Open in IMG/M
3300006881\|Ga0068865_101414453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300006903\|Ga0075426_10172681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1563	Open in IMG/M
3300006903\|Ga0075426_10600829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300006904\|Ga0075424_101079828	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300006904\|Ga0075424_101214159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300006904\|Ga0075424_101214160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	802	Open in IMG/M
3300006918\|Ga0079216_11326215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300007076\|Ga0075435_100213149	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1639	Open in IMG/M
3300009087\|Ga0105107_11027309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300009100\|Ga0075418_10701090	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300009162\|Ga0075423_10085615	All Organisms → cellular organisms → Bacteria	3289	Open in IMG/M
3300009177\|Ga0105248_10416103	All Organisms → cellular organisms → Bacteria	1514	Open in IMG/M
3300009553\|Ga0105249_12798498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300009789\|Ga0126307_10130201	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300010036\|Ga0126305_10000618	All Organisms → cellular organisms → Bacteria	15319	Open in IMG/M
3300010036\|Ga0126305_10069173	All Organisms → cellular organisms → Bacteria	2055	Open in IMG/M
3300010038\|Ga0126315_10239526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1104	Open in IMG/M
3300010038\|Ga0126315_10607883	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300010039\|Ga0126309_10006421	All Organisms → cellular organisms → Bacteria	4613	Open in IMG/M
3300010039\|Ga0126309_10039362	All Organisms → cellular organisms → Bacteria	2205	Open in IMG/M
3300010042\|Ga0126314_10215904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1355	Open in IMG/M
3300010044\|Ga0126310_10941017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300010045\|Ga0126311_10052131	All Organisms → cellular organisms → Bacteria	2635	Open in IMG/M
3300010359\|Ga0126376_10033054	All Organisms → cellular organisms → Bacteria	3520	Open in IMG/M
3300010362\|Ga0126377_12921888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300010371\|Ga0134125_10000016	All Organisms → cellular organisms → Bacteria	278868	Open in IMG/M
3300010400\|Ga0134122_10022441	All Organisms → cellular organisms → Bacteria	4748	Open in IMG/M
3300010400\|Ga0134122_10065719	All Organisms → cellular organisms → Bacteria	2810	Open in IMG/M
3300010401\|Ga0134121_10000299	All Organisms → cellular organisms → Bacteria	58609	Open in IMG/M
3300010401\|Ga0134121_10000748	All Organisms → cellular organisms → Bacteria	34191	Open in IMG/M
3300010401\|Ga0134121_10047235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3525	Open in IMG/M
3300010401\|Ga0134121_10296874	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300010401\|Ga0134121_10430620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1199	Open in IMG/M
3300010401\|Ga0134121_10553180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300010403\|Ga0134123_12096299	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300011427\|Ga0137448_1143565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300012354\|Ga0137366_10637988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300012360\|Ga0137375_10000283	All Organisms → cellular organisms → Bacteria	51723	Open in IMG/M
3300012469\|Ga0150984_114672091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300012668\|Ga0157216_10511373	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300012685\|Ga0137397_10570777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300012958\|Ga0164299_10877191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300012960\|Ga0164301_11037176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300012985\|Ga0164308_12204093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300017966\|Ga0187776_10605013	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300018422\|Ga0190265_10000252	All Organisms → cellular organisms → Bacteria	46352	Open in IMG/M
3300018422\|Ga0190265_10265979	All Organisms → cellular organisms → Bacteria → Proteobacteria	1769	Open in IMG/M
3300018422\|Ga0190265_13500425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300018432\|Ga0190275_11262647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	814	Open in IMG/M
3300018465\|Ga0190269_10271616	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300018465\|Ga0190269_10810499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300018465\|Ga0190269_12000851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300018469\|Ga0190270_12197688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300018476\|Ga0190274_10000024	All Organisms → cellular organisms → Bacteria	206811	Open in IMG/M
3300018920\|Ga0190273_10364328	All Organisms → cellular organisms → Bacteria	999	Open in IMG/M
3300020154\|Ga0196965_1001479	All Organisms → cellular organisms → Bacteria	9113	Open in IMG/M
3300021067\|Ga0196978_1076235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300023268\|Ga0247765_1003512	All Organisms → cellular organisms → Bacteria → Proteobacteria	5023	Open in IMG/M
3300025901\|Ga0207688_10830907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	585	Open in IMG/M
3300025918\|Ga0207662_11298092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300025923\|Ga0207681_10000080	All Organisms → cellular organisms → Bacteria	86343	Open in IMG/M
3300025923\|Ga0207681_10110468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1999	Open in IMG/M
3300025941\|Ga0207711_10959454	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300026308\|Ga0209265_1012579	All Organisms → cellular organisms → Bacteria	2637	Open in IMG/M
3300027716\|Ga0209682_10000413	All Organisms → cellular organisms → Bacteria	14719	Open in IMG/M
3300028380\|Ga0268265_10002105	All Organisms → cellular organisms → Bacteria	15471	Open in IMG/M
3300028577\|Ga0265318_10201780	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	727	Open in IMG/M
3300031366\|Ga0307506_10000106	All Organisms → cellular organisms → Bacteria	33117	Open in IMG/M
3300031366\|Ga0307506_10058756	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300031576\|Ga0247727_11059701	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300031616\|Ga0307508_10220991	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300031720\|Ga0307469_11456242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300031740\|Ga0307468_100174267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter → Lysobacter defluvii	1418	Open in IMG/M
3300031820\|Ga0307473_10402599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	897	Open in IMG/M
3300032157\|Ga0315912_10875259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300032174\|Ga0307470_11512619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300033550\|Ga0247829_11694800	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300034172\|Ga0334913_001068	All Organisms → cellular organisms → Bacteria	11195	Open in IMG/M
3300034402\|Ga0334960_000341	All Organisms → cellular organisms → Bacteria	20831	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.35%
Host-Associated	Host-Associated	33.65%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.54%
Plants	Host-Associated → Plants	33.65%
Aquatic	Environmental → Aquatic	4.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	26.92%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.81%
Freshwater	Environmental → Aquatic → Freshwater	2.88%
Roots	Host-Associated → Plants → Roots	1.92%
Marine	Environmental → Aquatic → Marine	0.96%
Sediment	Environmental → Aquatic → Sediment	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.96%
Cave	Environmental → Terrestrial → Cave	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	19.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.69%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.81%
Loam	Environmental → Terrestrial → Soil → Loam	3.85%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.92%
Sand	Environmental → Terrestrial → Soil → Sand	1.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	19.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.92%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	1.92%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.96%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.96%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.96%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	16.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.38%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	9.62%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	9.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.88%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.92%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.92%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.92%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.96%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.96%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.96%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.96%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.96%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004071	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004781	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012668	Arctic soils microbial communities. Combined Assembly of 23 SPs	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300020154	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_20	Environmental	Open in IMG/M
3300021067	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13C	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300027716	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M
3300034402	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 56SNS	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1168875351	3300000956	Soil	MDDSSAEQVILSRFRQRCHIAGSVQRGYGMRAQAIRYVQPEHPGVDIEAGLEAMVQKGWLKVNETRTWYYLPEEGVEQVKAARPIS*
C688J35102_1202872092	3300002568	Soil	MDSAKAEQVILARFKERCHTAGAIQAGYGMRAQAIRVVMPPGTDVDGQLKGMVEKGWLKANPAGTWYYLTVDGADRVKAA*
Ga0055486_100555803	3300004071	Natural And Restored Wetlands	MDASQAQQVVLSRFKTRCHTAGGVQAGYGMRAQAIRYGETEHPGVDLAAGLAAMVEKGWLKQNAAGTWY
Ga0062590_1002962753	3300004157	Soil	MDLSQTEQAILARFKARCHTAGGVQPGYGMRAKAIKLVQPSGADFDAALQGMLEKGWLKKNEAGTWYFLTAEGAERVKTA*
Ga0062379_100001577	3300004781	Wetland Sediment	MDFSQAQQVVLSRFKTRCHIAGSTQAGYGMRAQAIRHGEAGHPGVDIAAGLAAMVEKGLLKQNPSGTWYYLTPEGAEQVKGFRGEPPRT*
Ga0062594_1027154672	3300005093	Soil	MDSSQVEQAVLARFKERCHTAGGVQPGYGMRAKAIGLVLPPGTDVEGILKGMVEKGWLKPNAAGTWYFLTADGAERVKAA*
Ga0070669_10000004689	3300005353	Switchgrass Rhizosphere	MDSSQTEQAILARFKERCHRAGGVQVGYGMRAQAIRLAQPRGADVDSALSAMVEKGWLKMNAAGTWYFLTADGAERVKAA*
Ga0070669_1013354832	3300005353	Switchgrass Rhizosphere	ERCHIAGSVQAGYGMRAQAIRWVEPQHPGLNLEAGLEAMVEKGWLKKNPSGTWYYLTPDGAEQVKSLLPPHF*
Ga0070675_1007207472	3300005354	Miscanthus Rhizosphere	MDQSKAEQAVLARYKERGHRAGGVQAGFGMRAKAIRYLAPEAAADIDLALENMTKRGWLKPNAAGTWYFLTELGAEQVKRVK*
Ga0070667_1004270502	3300005367	Switchgrass Rhizosphere	MDSKAEQIILTRFQERCARAGGVQAGYGMRAQAIRLAKGATGVDVDGALKGMVEKGWLKPNAAGTWYFLSADGAEHVKTAKG*
Ga0070685_103947061	3300005466	Switchgrass Rhizosphere	HFQEVAMDSSQTEQAILARFKERFHRAGGVQVGYGMRAQAIRLAQPRGADVDSALSAMVEKGWLKVNAAGTWYFLTADGVERVKAA*
Ga0070686_1010270732	3300005544	Switchgrass Rhizosphere	KIGAMELSQAEQVVLARFNERGYRAGGVKAGFGMRAQAIRYVVAPEAAADIDRALQGMVEKGWVKPNAAGTWFFLTETGVEKVTAVPNGR*
Ga0066654_100020872	3300005587	Soil	MDLAKAEQVILARFWERCLRAGGVQAGYGMRRQAIELAPGAPGLAAADIGTALAAMVEKGWLKVNAAGTWYFLTAEGAEKVKAA*
Ga0068859_1013210312	3300005617	Switchgrass Rhizosphere	MELSKAEQVVLARFRERCLRAGGVQAGYGMRAKAIRLVPGAPGPEIDSALQAMVEKGWLKPNAAGTWFFLSADGAEQVKAA*
Ga0068862_10000631513	3300005844	Switchgrass Rhizosphere	MTMDQSKAEQAVLARYKERCHRSGGVQAGFGMRAKAIRYLAPEAAADIDLALENMTKRGWLKPNAAGTWYFLTELGAEQ
Ga0068871_1010320002	3300006358	Miscanthus Rhizosphere	LQFRPMDSKAEQIILTRFQERCARAGGVQAGYGMRAQAIRLAKGAAGVDVDGALKGMVEKGWLKPNAAGTWYFLSADGAEHVKTAKG*
Ga0075428_1007141702	3300006844	Populus Rhizosphere	VLARYKERCHRSGGVQAGFGMRAKAIRYLAPEAATDIDRALQGMVEKGWLKPNAAGTWYFLTEAGAEQVKAVR*
Ga0075428_1007660754	3300006844	Populus Rhizosphere	VRSGTMDQSKAEQAVLARYKERCHRSGGVQAGFGMRAKAIRYLAPEAAADIDRALQGMVEKGWLKPNAAGTWYFLTEAGAEQVKAVK*
Ga0075433_104264262	3300006852	Populus Rhizosphere	MDLTQAEQAILARFRERCHIAGSVQPGYGMRAKAIKLYQPAGADFDAALKAMVEKGWLKMNAAGTWYFLTAEGAERVKAA*
Ga0075425_1000505167	3300006854	Populus Rhizosphere	MDLTQAEQAILARFRERCHIAGSVQPGYGMRAKAIKLYEPAGADFDAALKAMVEKGWLKMNAAGTWYFLTADGAERVKAA*
Ga0075425_1003777982	3300006854	Populus Rhizosphere	MDLSKAEQVILARFRERCHRAGGVQTGYGMRVQAIRQTAASGIDLDAGLKAMVEKGWLKPNAAGTWYFLSADGAEQVKAR*
Ga0075425_1006871152	3300006854	Populus Rhizosphere	MESTQAEQAILARFRERCHIAGSVQPGYGMRAKAIKLYQPAGADFDAALKAMVEKGWLKVNAAGTWYFLTAEGAGRVKAA*
Ga0075425_1013308452	3300006854	Populus Rhizosphere	MDLSQAEQAILARFKARCHTAGGVQPGYGMRANAIKLVQPPGADFDGALQGMLEKGWLKKNEAGTWYFLTAEGAERVKAA*
Ga0075434_1002014851	3300006871	Populus Rhizosphere	MDSAKAEQVILGRFKERCHTAGAIQAGYGMRAQAIRIALPPGTDVDGLLKGMVEKGWLKVNPAGTWYYLTVDGADRVKAA*
Ga0075434_1014484062	3300006871	Populus Rhizosphere	MDLTQAEQAILARFRERCHIAGSVQPGYGMRAKAIKLYQPAGADFDAALKAMVEKGWLKVNAAGTWYFLTAEGAEQVKAA*
Ga0068865_1014144532	3300006881	Miscanthus Rhizosphere	MGSQVEQAILARFKERCLRAGGVQPGYGMRARAIGLALPPGTDVEGTLKGMVEKGWLKPNAAGTWYFLTADGAEQVKAA*
Ga0075426_101726811	3300006903	Populus Rhizosphere	MDLTQAEQAILARFRERCHIAGSVQPGYGMRAKAIKLYEPVGADFDAALKAMVEKGWLKMNAAGTWYFLTADGAERVKAA*
Ga0075426_106008292	3300006903	Populus Rhizosphere	MDLSKAEQVILARFRERCHRAGGVQTGYGMRAQAIRQTAASGIDLDAGLKAMVEKGWLKPNAAGTWYFLSADGAERVKAS*
Ga0075424_1010798282	3300006904	Populus Rhizosphere	MDLTQAEQAILARFRERCHIAGSVQPGYGMRAKAIKLYQPAGADFDAALKAMVEKGWLKMNAAGTWYFLTADGAERVKAA*
Ga0075424_1012141591	3300006904	Populus Rhizosphere	RERCHIAGSVQPGYGMRAKAIKLYEPAGADFDAALKAMVEKGWLKVNAAGTWYFLTADGAERVKAA*
Ga0075424_1012141601	3300006904	Populus Rhizosphere	RERCHIAGSVQPGYGMRAKAIKLYEPAGADFDAALKAMVEKGWLKMNAAGTWYFLTADGAERVKAA*
Ga0079216_113262152	3300006918	Agricultural Soil	MAMDPSKAEQAVLARYKERCDRAGGVQAGFGMRAKAIRYLAPEAAADIDRALQSMVEKGWLKPNAAGTWYFLTEAGAEQVKAVR*
Ga0075435_1002131493	3300007076	Populus Rhizosphere	MDLTQAEQAILARFRERCHIAGSVQPGYGMRAKAIKLYEPAGADFDAALKAMVEKGWLKVNAAGTWYFLTADGAERVKAA*
Ga0105107_110273091	3300009087	Freshwater Sediment	MDMSKVEQVVLARFKERGHRAGGVQPGYGMRYDAIRYGHPAEADFRAVLNGMVEKGLLKANEAGTWYFLTADGAERVKAA*
Ga0075418_107010903	3300009100	Populus Rhizosphere	MDQSKAEQAVLARYKERCHRSGGVQAGFGMRAKAIRYLAPEAAADIDRALQGMVEKGWLKPNAAGTWYFLTEAGAEQVKAVK*
Ga0075423_100856151	3300009162	Populus Rhizosphere	MDLTQAEQAILARFRERCHIAGSVQPGYGMRAKAIKLYQPAGADFDAALKAMVEKGWLKMNAAGTWYFLTADG
Ga0105248_104161033	3300009177	Switchgrass Rhizosphere	MRYNPSRFFFEGVDMELSKAEQVVLARFRERCLRAGGVQAGYGMRAKAIRLVPGAPSTEIDSALQAMVEKGWLKPNAAGTWFFLSADGAEQVKAA*
Ga0105249_127984982	3300009553	Switchgrass Rhizosphere	MDQSKAEQAVLARYKERCHRSGGVQAGFGMRAKAIRYLAPEAAADIDLALENMTKRGWLKPNAAGTWYFLTELGAEQVKRVK*
Ga0126307_101302011	3300009789	Serpentine Soil	MDQSKAEQAVLARYKERCDRAGGVQAGFGMRAKAIRYLAPEAATDIDRALHSMVEKGWLKPNAAGTWYFLTEAGAEQVKAVK*
Ga0126305_1000061810	3300010036	Serpentine Soil	MDSSQTEQAIIARYQERCHRAGGVQVGYGMRAQAIRLGQPRGVDVDSALNAMVEKGWLKANAAGTWYFLTADGAERVKAA*
Ga0126305_100691732	3300010036	Serpentine Soil	MDQSKAEQAVLARYKERCDRAGGVQAGFGMRAKAIRYLAPEAATDIDRALQSMVEKGWLKPNAAGTWYFLTEAGAEQVKTVK*
Ga0126315_102395262	3300010038	Serpentine Soil	MDSSQAEQAILARFKERCHTAGGVQPGYGMRAKAIGLVLPPGTDVEGTLMGMVEKDWLKPNAAGTWYFLTADGAERVKAA*
Ga0126315_106078831	3300010038	Serpentine Soil	CKRIMYRGAGGRDLGYNPPTFQEVAMDSSQAEQAILARFKERCHTAGGVQPGYGMRAKAIGLVLPPGTDVEGTLKGMVEKGWLKANAAGTWYFLTADGAERVKAA*
Ga0126309_100064212	3300010039	Serpentine Soil	MTAEQVVLARFKERCHIAGSVQPGYGMRAQAIRWVQPEHPGVDIDAGLAAMVEKGWLKRNAAGTWYYLTPEGAEQVKGLMPGRV*
Ga0126309_100393622	3300010039	Serpentine Soil	LGVEILRYNPPTFQEGAMDSSQAEQAILARFKERCHTAGGVQPGYGMRAKAIGLVLPPGTDVEGILKGMVEKGWLKPNAAGTWYFLTADGAERVKAA*
Ga0126314_102159042	3300010042	Serpentine Soil	MDSSQAEQAIFARFKERCHTAGGVQPGYGMRAKAIGLVLPPGTDVEGILKGMVEKGWLKPNAAGTWYFLTADGAERVKAA*
Ga0126310_109410172	3300010044	Serpentine Soil	MDQSKAEQAVLARYKERSDRAGGVQAGFGMRAKAIRYLAPEAATDIDRALQSMVEKGWLKPNAAGTWYFLTEAGAEQVKAVK*
Ga0126311_100521311	3300010045	Serpentine Soil	MTAEQVVLARFKERCHIAGSVLPGYGMRAQAIRWVQPEHPGVDIDAGLEAMVEKGWLKRNAAGTWYYLTPEGAEQVKGLLPGSPGVETPG*
Ga0126376_100330541	3300010359	Tropical Forest Soil	MDQTQAEQAILARFKERCHIAGSVQPGYGMRAKAIKLYEPSGADFDAVLKAMVEKGWLKMNAAGTWYFLTADGAERVKAA*
Ga0126377_129218881	3300010362	Tropical Forest Soil	MDQTQAEQAILARFKARCHIAGGVQPGYGMRAKAIKLYEPSGADFDAALKGMVEKGWLKVNAAGTWYFLSAEGAERVKAA*
Ga0134125_1000001626	3300010371	Terrestrial Soil	MDSAKAEQVILARFKERCHTAGAIQAGYGMRAQAIRVIMPAGTDVDGPLKGMVAKGWLKANPAGTWYYLTADGADRVKAA*
Ga0134122_100224415	3300010400	Terrestrial Soil	MDLSQAEQAILGRFKARCHIAGVVQPGYGMRARAIKIAQPSGADFDAVLKAMVEKGWLKVNAAGTWYFLTAEGAEQVKAA*
Ga0134122_100657192	3300010400	Terrestrial Soil	MDLTQAEQAIWARFKDRCHIAGSVQPGYGMRAKAIKLAQPSGADFDQVLKGMVEKGWLKVNAASTWYYLTADGAERVKTA*
Ga0134121_1000029944	3300010401	Terrestrial Soil	MDSAKAEQAILTRFKERCHTAGAIQAGYGMRAQAIRIVLPAGTDVDGPLKGMVEKGWLKANPAGTWYYLTADGADRVKAA*
Ga0134121_1000074826	3300010401	Terrestrial Soil	MDSAKAEQVILGRFKERCHTAGAIQAGYGMRAQAIRIALPTGTDVDGLLKGMVEKGWLKVNPAGTWYYLTVDGADRVKAA*
Ga0134121_100472353	3300010401	Terrestrial Soil	MTAEQVILDRFRYRCHIAGSVQPGYGMRAQAIRYGQEGLGAEIDAELATMVEKGWLKRNPAGTWYYLTPDGAEQVKGLKPGA*
Ga0134121_102968742	3300010401	Terrestrial Soil	MRYNPSRFFFEGVDMELSKAEQVVLARFRERCLRAGGVQAGYGMRAKAIRLVPGAPGPEIDSALQAMVEKGWLKPNAAGTWFFLSADGAEQVKAA*
Ga0134121_104306201	3300010401	Terrestrial Soil	MDSAKAEQVILARFKERCHTAGAIQAGYGMRAQAIRVVLPAGTDVDGPLKGMVEKGSLNANPARPSYYLPVDGAARITAA*
Ga0134121_105531802	3300010401	Terrestrial Soil	MDSAKAEQAILARFKERCHTAGAIQAGYGMRAQAVRVVMPPGTDVDGLLKGMVEKGWLKANPAGTWYYLTVDGADRVKAA*
Ga0134123_120962992	3300010403	Terrestrial Soil	MENSMAEQVILGRFKERCHIAGSVQTGYGMRAQAIRWVQPQHPGVDIDAGLVAMVEKGWLKRNDAGTWYYLTQDGAEQVKGLL*
Ga0137448_11435652	3300011427	Soil	MAMDPSKAEQTVLARYKERCHRAGSIQAGFGMRAQAIRYLAPLAPEASETAADVDRALHAMVEKGWLKP
Ga0137366_106379881	3300012354	Vadose Zone Soil	MDSAKAEQVILARFKERCHTAGAIQAGYGMRAQAIRVVLPPGTDVDGPLKGMVEKGWLKVNPAGTWYY
Ga0137375_100002837	3300012360	Vadose Zone Soil	MTTEQVILDRFRYRCHIAGSVQPGYGMRAQAIRYGQPEHPGVDIDAGLAAMVEKGWLKQNPAGTWYYLTPDGAEQVKALRPTA*
Ga0150984_1146720911	3300012469	Avena Fatua Rhizosphere	DSAKAEQVILARFKERCHTAGAIQAGYGMRAQAIRVVMPPGTDVDGQLKGMVEKGWLKANPAGTWYYLTVDGADRVKAA*
Ga0157216_105113731	3300012668	Glacier Forefield Soil	GGGPCGLRYNPPTFRRIAMSSSQVEQAVLARFKERCHRAGGVQVGYGMRSQAIRLAQPRGTDVDSALSTMVDKGWLKPNAAGTWYFLTADGAEQVKAA*
Ga0137397_105707772	3300012685	Vadose Zone Soil	MDSAKAEQVILGRFKERCHTAGAIQAGYGMRAQAIRIVLPPGTDVDGLLKGMVEKGWLKANPAGTWYYLTVDGVARVKAA*
Ga0164299_108771912	3300012958	Soil	MDSAKAEQVILARFKERCHTAGAIQAGYGMRAQAIRIVLPPGTDVEPILKGMVEKGWLKANPAGTWYYLTADGADRVKAA*
Ga0164301_110371761	3300012960	Soil	MDSAKAEQVILARFKERCHTAGAIQAGYGMRAQAIRVVMPAGTDVDGPLKGMVEKGWLKANPAGTWYYLTVDGADRVKAA*
Ga0164308_122040931	3300012985	Soil	MDSAKAEQVILARFKERCHTAGAIQAGYGMRAQAIRVVLPAGTDVDGPLKGMVEKGWLKANPAGTWYYLTVDG
Ga0187776_106050131	3300017966	Tropical Peatland	MMAPMDVSQAEQIILARFRERCDRAGGVQPGYGMRAQAIRIAPGAGRVDVDAGLKEMVDKGWLKANAAGTWYFLSAAGAEEVKRV
Ga0190265_1000025236	3300018422	Soil	MNASNENAEQVVLARYKERCHRAGAIQTGYGMRAKAIRYLAPEAEIDRALQGMVEKGWLKPNAAGTWYFLTEAGAEQVKAVPNGR
Ga0190265_102659792	3300018422	Soil	MAMDQSKAEQAVLTRYKERCDRAGGIQAGFGMRAKAIRYLAPEAATDIDRALQSMVEKGWLKPNAAGTWYFLTEAGAEQVKGSR
Ga0190265_135004251	3300018422	Soil	MDQSKAEQAVLARYKERCDRAGGVQAGFGMRAKAIRYLAPEAATDIDRALQSMVEKGWLKPNAAGTWYFLTEAGAEHVKAVK
Ga0190275_112626472	3300018432	Soil	MAMDPSKAEQAVLARYKERCDRAGGVQAGFGMRAKAIRYLAPEAAADIDRALQSMVEKGWLKPNAAGTWYFLTEAGAEQVKGVK
Ga0190269_102716162	3300018465	Soil	MTAEQVILSRFKERCHIAGRVQPGYGMRAQAIRYVQPEHPGVDLDAGLDAMIEKGWLKRNPSGTWYYLTPEGAEQVKGLLPGRG
Ga0190269_108104992	3300018465	Soil	MAMDPSKAEQAVLTRYKERCDRAGGVQAGFGMRAKAIRYMAPEAAADIDRALQGMVEKGWVKPNAAGTWYFLTEAGAEQVKAVR
Ga0190269_120008511	3300018465	Soil	MESSQAEQVILDRFKERCHIAGTVQPGYGMRAQAIRYVQPEHPGVDLDAGLEAMVEKGWLKRNPAGTWYYLTPEGAELVKGLLPGQG
Ga0190270_121976882	3300018469	Soil	MSSQVEQAILARFKERCHRAGGVQAGYGMRTQAIRLVLPPGTDVEGTLKGMVEKGWLKANAAGTWYFLSADGAEQVKAA
Ga0190274_1000002413	3300018476	Soil	MTAEQVVLGRFKERCHIAGSVQPGYGMRAQAIRWVQPEHPGVDIDAGLEAMVEKGWLKRNAAGTWYYLTPEGAEQVKGLMPGRG
Ga0190273_103643282	3300018920	Soil	MDPSKAEQAVLARYKERCDRAGGVQAGFGMRAKAIRYLAPEAATDIDRALQSMVEKGWLKPNAAGTWYFLTEAGAEQVKAVK
Ga0196965_10014794	3300020154	Soil	MDTTPAEQAVLARFRERCHIAGVVQVGYGMRAAAIRLARNSRPELDVDQALTAMVEKGWLKRNEAGTWYYLTADGAEQVKAPAPLSALQVT
Ga0196978_10762351	3300021067	Soil	EQVILGRFKERCHIAGSVQPGYGMRAQAIRYVEPQHPGVNLEAGLEAMVEKGWLKRNPSGTWYYLTPDGAEQVKKLLPAHL
Ga0247765_10035124	3300023268	Plant Litter	MERSKAEQVVLTRFRERCLRAGGVQAGYGMRAKAIRLTPGAGSAEIDSALQGMVEKGWLKPNAAGTWFFLSADGAEQVKAA
Ga0207688_108309072	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MDSKAEQVILARFYERCHRAGGVQAGYGMRAQAIRLAQGAAGINIDAALQAMVEKGWLKPNAAGTWYFLTADGAEQVKAAKAS
Ga0207662_112980922	3300025918	Switchgrass Rhizosphere	FKERCHRAGGIQAGYGMRARAIGLVLPPGTDVEGPLKGMVEKGWLKANAAGTWFFLSADGAEQVKAA
Ga0207681_1000008064	3300025923	Switchgrass Rhizosphere	MDSSQTEQAILARFKERCHRAGGVQVGYGMRAQAIRLAQPRGADVDSALSAMVEKGWLKMNAAGTWYFLTADGAERVKAA
Ga0207681_101104682	3300025923	Switchgrass Rhizosphere	VILGRFKERCHIAGSVQAGYGMRAQAIRWVEPQHPGLNLEAGLEAMVEKGWLKKNPSGTWYYLTPDGAEQVKSLLPPHF
Ga0207711_109594542	3300025941	Switchgrass Rhizosphere	MELSKAEQVVLARFRERCLRAGGVQAGYGMRAKAIRLVPGAPSTEIDSALQAMVEKGWLKPNAAGTWFFLSADGAEQVKAA
Ga0209265_10125792	3300026308	Soil	MDLAKAEQVILARFWERCLRAGGVQAGYGMRRQAIELAPGAPGLAAADIGTALAAMVEKGWLKVNAAGTWYFLTAEGAEKVKAA
Ga0209682_1000041312	3300027716	Wetland Sediment	MDFSQAQQVVLSRFKTRCHIAGSTQAGYGMRAQAIRHGEAGHPGVDIAAGLAAMVEKGLLKQNPSGTWYYLTPEGAEQVKGFRGEPPRT
Ga0268265_1000210513	3300028380	Switchgrass Rhizosphere	MTMDQSKAEQAVLARYKERCHRSGGVQAGFGMRAKAIRYLAPEAAADIDLALENMTKRGWLKPNAAGTWYFLTELGDEQVKRVR
Ga0265318_102017802	3300028577	Rhizosphere	MDSAKAEQVILARFKERCHTAGAIQAGYGMRAQAIRVVLPAGTDVDGPLKGMVEKGWLKANPAGTWYYLTVDGADRVKAA
Ga0307506_1000010620	3300031366	Soil	MMELSKAEQVVLARFRERCLRAGGVQAGYGMRAKAIRLVPGAPSTEIDSALQGMVEKGWLKPNAAGTWFFLSADGAEQVKAA
Ga0307506_100587562	3300031366	Soil	MDSKAEQIILARFLERCARAGGVQAGYGMRAQAIRLAQGAAGVDVDGALKGMVEKGWLKPNAAGTWYFLSADGAEQVKTALTP
Ga0247727_110597012	3300031576	Biofilm	MDLSKAEHIVLTRYKERGDRAGGIQPGYGMRAQAIRYLAPQAAAEIDKALQGMVEKGWLKPNAAGTWYFLTAEGAERVKTAPNG
Ga0307508_102209912	3300031616	Ectomycorrhiza	MAGDVWRLTFLMIEVGLQSRPMDSKAEQIILARFRERCARAGGVQAGYGMRAKAIRLAQGAAGVDVDGALKGMVEKGWLKPNAAGTWYFLSADGAEQVK
Ga0307469_114562421	3300031720	Hardwood Forest Soil	MDSAKAEQVILARFKERCHTAGAIQAGYGMRAQAIRIVLPAGTDVDGPLKGMVEKGWLKANPAGTWYYLTVDGADRVKAA
Ga0307468_1001742672	3300031740	Hardwood Forest Soil	EQAILTRFKARCHTAGGVQPGYGMRAKAIKLVQPSGADFDAALQGMLEKGWLKKNEAGTWYFLTAEGAERVKAA
Ga0307473_104025992	3300031820	Hardwood Forest Soil	MESSTAEQVILGRFKERCHIAGSVQTGYGMRAQAIRWVQPQHPGVDIDAGLAAMVEKGWLKRNDAGTWYYLTQDGAEQVKGLL
Ga0315912_108752592	3300032157	Soil	MDPSKAEQTVLARYKERCHRSGGIQAGFGMRAKAIRYLAPEAAADIDRALQGMVEKGWLKPNAAGTWYFLTEAGAEQVRAVR
Ga0307470_115126192	3300032174	Hardwood Forest Soil	MDSAKAEQAILARFKERCHTAGAIQAGYGMRAQAIRIVLPPGTDVDGLLKGMVEKGLLKANPAGTWYYLTVDGADRVKAA
Ga0247829_116948002	3300033550	Soil	IRRMDPSKAEQAVLARYKERGHRAGGVQAGFGMRAKAIRYLAPEAAADIDRALQSMVEKGWLKPNAAGTWYFLTEAGAEQVKAVR
Ga0334913_001068_7229_7471	3300034172	Sub-Biocrust Soil	MDLSQAEQAILARFKARCHTAGGVQPGYGMRAKAIKLVQPPGADFDSALQGMVEKGWLKKNEAGTWYFLTAEGAERVKAA
Ga0334960_000341_7074_7316	3300034402	Sub-Biocrust Soil	MDVSQAEQAILARFKARCHIAGGVQTGYGMRAQAIKLVEPPGADFDQALKGMVEKGWLKMNQAGTWYYLTAEGAERVKAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097428

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences