Metagenome Family F097416

Basic Information
Family ID	F097416
Family Type	Metagenome
Number of Sequences	104
Average Sequence Length	45 residues
Representative Sequence	MKGTARPGLSRREFLAGASALGGVAIASAAAPMQITTMAPFEKLPPYGN
Number of Associated Samples	90
Number of Associated Scaffolds	104

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	90.38 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.26

Most Common Taxonomy
Group	Bacteria (64.423 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (9.615 % of family members)
Environment Ontology (ENVO)	Unclassified (52.885 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (60.577 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.58% β-sheet: 0.00% Coil/Unstructured: 84.42%
Feature Viewer

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Pfam ID	Name	% Frequency in 104 Family Scaffolds
PF04239	DUF421	4.81
PF13602	ADH_zinc_N_2	4.81
PF13620	CarboxypepD_reg	3.85
PF07676	PD40	2.88
PF00069	Pkinase	2.88
PF03929	PepSY_TM	1.92
PF00753	Lactamase_B	1.92
PF10009	DUF2252	1.92
PF12543	DUF3738	0.96
PF00561	Abhydrolase_1	0.96
PF13535	ATP-grasp_4	0.96
PF13428	TPR_14	0.96
PF07687	M20_dimer	0.96
PF01872	RibD_C	0.96
PF13147	Obsolete Pfam Family	0.96
PF07883	Cupin_2	0.96
PF13442	Cytochrome_CBB3	0.96
PF10518	TAT_signal	0.96
PF11954	DUF3471	0.96
PF03786	UxuA	0.96
PF13360	PQQ_2	0.96
PF05050	Methyltransf_21	0.96
PF01322	Cytochrom_C_2	0.96
PF12796	Ank_2	0.96
PF13172	Obsolete Pfam Family	0.96
PF02775	TPP_enzyme_C	0.96
PF11738	DUF3298	0.96
PF02744	GalP_UDP_tr_C	0.96
PF01979	Amidohydro_1	0.96
PF03551	PadR	0.96
PF01436	NHL	0.96
PF13091	PLDc_2	0.96
PF13408	Zn_ribbon_recom	0.96

COG ID	Name	Functional Category	% Frequency in 104 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.54
COG2323	Uncharacterized membrane protein YcaP, DUF421 family	Function unknown [S]	4.81
COG3182	PepSY-associated TM region	Function unknown [S]	1.92
COG3295	Uncharacterized conserved protein	Function unknown [S]	1.92
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.96
COG1312	D-mannonate dehydratase	Carbohydrate transport and metabolism [G]	0.96
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.96
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.96
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.96
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.96
COG3909	Cytochrome c556	Energy production and conversion [C]	0.96

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.42 %
Unclassified	root	N/A	35.58 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.42 %
Unclassified	root	N/A	35.58 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.42 %
Unclassified	root	N/A	35.58 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.58 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	25.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.58 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.62 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.96 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.92 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.96 %
unclassified Terriglobia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia	0.96 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.92 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.96 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.96 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.92 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.96 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.96 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.58 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.69 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1.92 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.96 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.96 %
Acidobacteriia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	0.96 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000787\|JGI11643J11755_11276422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	503	Open in IMG/M
3300000953\|JGI11615J12901_10401370	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300001686\|C688J18823_10590258	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300003319\|soilL2_10080950	All Organisms → cellular organisms → Bacteria	4374	Open in IMG/M
3300004114\|Ga0062593_101272494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300004157\|Ga0062590_101947313	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300004157\|Ga0062590_102485117	All Organisms → cellular organisms → Bacteria → Acidobacteria	548	Open in IMG/M
3300004633\|Ga0066395_10020821	All Organisms → cellular organisms → Bacteria	2606	Open in IMG/M
3300005333\|Ga0070677_10900633	Not Available	511	Open in IMG/M
3300005345\|Ga0070692_10958502	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005355\|Ga0070671_101824380	Not Available	540	Open in IMG/M
3300005356\|Ga0070674_100764101	Not Available	832	Open in IMG/M
3300005440\|Ga0070705_101659483	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300005455\|Ga0070663_102039359	Not Available	516	Open in IMG/M
3300005456\|Ga0070678_100909742	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300005459\|Ga0068867_100417582	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300005459\|Ga0068867_101819904	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300005543\|Ga0070672_100393666	Not Available	1187	Open in IMG/M
3300005546\|Ga0070696_101366835	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300005548\|Ga0070665_101597464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300005564\|Ga0070664_100909573	All Organisms → cellular organisms → Bacteria	825	Open in IMG/M
3300005564\|Ga0070664_102081628	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300005577\|Ga0068857_100736572	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300005617\|Ga0068859_102739308	Not Available	542	Open in IMG/M
3300005618\|Ga0068864_101733197	Not Available	630	Open in IMG/M
3300005764\|Ga0066903_107860689	Not Available	548	Open in IMG/M
3300005840\|Ga0068870_10022749	All Organisms → cellular organisms → Bacteria	3083	Open in IMG/M
3300005840\|Ga0068870_11036608	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005844\|Ga0068862_101782145	Not Available	625	Open in IMG/M
3300006046\|Ga0066652_101087654	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300006358\|Ga0068871_102157384	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300006844\|Ga0075428_102481698	Not Available	531	Open in IMG/M
3300006846\|Ga0075430_101278762	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300006871\|Ga0075434_101525466	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300006903\|Ga0075426_10578696	Not Available	837	Open in IMG/M
3300009098\|Ga0105245_10659776	Not Available	1077	Open in IMG/M
3300009147\|Ga0114129_10693424	All Organisms → cellular organisms → Bacteria	1310	Open in IMG/M
3300009148\|Ga0105243_11874739	Not Available	632	Open in IMG/M
3300009176\|Ga0105242_12361895	Not Available	579	Open in IMG/M
3300009177\|Ga0105248_13405469	Not Available	505	Open in IMG/M
3300009610\|Ga0105340_1081476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1284	Open in IMG/M
3300010358\|Ga0126370_12042138	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300010366\|Ga0126379_11911016	Not Available	697	Open in IMG/M
3300010399\|Ga0134127_12741493	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300010403\|Ga0134123_13157797	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300012179\|Ga0137334_1151472	Not Available	525	Open in IMG/M
3300012200\|Ga0137382_10869144	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300012683\|Ga0137398_11135555	Not Available	537	Open in IMG/M
3300012892\|Ga0157294_10008832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1691	Open in IMG/M
3300012910\|Ga0157308_10192652	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300012989\|Ga0164305_11642224	Not Available	575	Open in IMG/M
3300013297\|Ga0157378_12338453	Not Available	586	Open in IMG/M
3300015372\|Ga0132256_100573043	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300015373\|Ga0132257_100343242	Not Available	1803	Open in IMG/M
3300018070\|Ga0184631_10262817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → unclassified Terriglobia → Acidobacteriia bacterium	714	Open in IMG/M
3300018476\|Ga0190274_10227924	All Organisms → cellular organisms → Bacteria → Acidobacteria	1667	Open in IMG/M
3300018476\|Ga0190274_12179527	Not Available	651	Open in IMG/M
3300021082\|Ga0210380_10137340	All Organisms → cellular organisms → Bacteria → Acidobacteria	1093	Open in IMG/M
3300025923\|Ga0207681_10257926	All Organisms → cellular organisms → Bacteria → Proteobacteria	1364	Open in IMG/M
3300025923\|Ga0207681_11032766	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300025927\|Ga0207687_11632404	Not Available	553	Open in IMG/M
3300025930\|Ga0207701_11027849	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300025931\|Ga0207644_11461639	Not Available	574	Open in IMG/M
3300025933\|Ga0207706_10113556	Not Available	2383	Open in IMG/M
3300025935\|Ga0207709_10398764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_65_29	1051	Open in IMG/M
3300025937\|Ga0207669_10509430	All Organisms → cellular organisms → Bacteria	964	Open in IMG/M
3300025941\|Ga0207711_10080345	All Organisms → cellular organisms → Bacteria → Acidobacteria	2848	Open in IMG/M
3300025941\|Ga0207711_10568267	Not Available	1058	Open in IMG/M
3300025942\|Ga0207689_10354254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1220	Open in IMG/M
3300025945\|Ga0207679_10743492	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	892	Open in IMG/M
3300025960\|Ga0207651_10203764	Not Available	1587	Open in IMG/M
3300025960\|Ga0207651_11743271	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300025972\|Ga0207668_12074982	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300026023\|Ga0207677_10067822	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300026067\|Ga0207678_11819320	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300026088\|Ga0207641_10005685	All Organisms → cellular organisms → Bacteria → Acidobacteria	10614	Open in IMG/M
3300026088\|Ga0207641_10917513	All Organisms → cellular organisms → Bacteria → Acidobacteria	870	Open in IMG/M
3300026095\|Ga0207676_10469746	Not Available	1189	Open in IMG/M
3300026116\|Ga0207674_10210890	Not Available	1891	Open in IMG/M
3300026116\|Ga0207674_10424771	All Organisms → cellular organisms → Bacteria	1284	Open in IMG/M
3300026116\|Ga0207674_11958437	Not Available	551	Open in IMG/M
3300027695\|Ga0209966_1112946	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300028380\|Ga0268265_11306405	Not Available	726	Open in IMG/M
3300028380\|Ga0268265_11311099	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300028819\|Ga0307296_10701595	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300031538\|Ga0310888_10380819	Not Available	824	Open in IMG/M
3300031548\|Ga0307408_101133072	Not Available	727	Open in IMG/M
3300031680\|Ga0318574_10432981	Not Available	769	Open in IMG/M
3300031708\|Ga0310686_112764422	Not Available	502	Open in IMG/M
3300031720\|Ga0307469_10119933	All Organisms → cellular organisms → Bacteria	1900	Open in IMG/M
3300031847\|Ga0310907_10799051	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300031858\|Ga0310892_11099159	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300031943\|Ga0310885_10896542	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300032000\|Ga0310903_10040431	All Organisms → cellular organisms → Bacteria	1734	Open in IMG/M
3300032003\|Ga0310897_10265794	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300032005\|Ga0307411_11270761	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300032075\|Ga0310890_10075642	All Organisms → cellular organisms → Bacteria	2027	Open in IMG/M
3300032075\|Ga0310890_11647085	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300032144\|Ga0315910_10239506	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300032157\|Ga0315912_10618746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300032157\|Ga0315912_10748852	Not Available	778	Open in IMG/M
3300032205\|Ga0307472_100561428	Not Available	999	Open in IMG/M
3300032211\|Ga0310896_10063224	All Organisms → cellular organisms → Bacteria	1541	Open in IMG/M
3300034147\|Ga0364925_0176348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	782	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.81%
Environmental	Environmental	45.19%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.81%
Terrestrial	Environmental → Terrestrial	41.35%
Aquatic	Environmental → Aquatic	3.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	40.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.19%
Sediment	Environmental → Aquatic → Sediment	2.88%
Freshwater	Environmental → Aquatic → Freshwater	0.96%
Floodplain	Environmental → Terrestrial → Floodplain	0.96%
Roots	Host-Associated → Plants → Roots	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.62%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	18.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.38%
Loam	Environmental → Terrestrial → Soil → Loam	5.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.96%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	18.27%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.38%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	8.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.96%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	8.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	7.69%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.77%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.77%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.92%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.92%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.92%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.96%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.96%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.96%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.96%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012179	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT262_2	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018070	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027695	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J11755_112764221	3300000787	Soil	MKGTATPGLSRREFLAGXSALGGVAIASAASAQITTIAPYDKLPP
JGI11615J12901_104013703	3300000953	Soil	MKGPGTPGISRREFLAGASALGGVAIASAASAQITTLAPFEKLP
C688J18823_105902583	3300001686	Soil	MKGTATPGLSRREFLAGASALGGVAIASAAAPPQITTP
soilL2_100809503	3300003319	Sugarcane Root And Bulk Soil	MSAVSRREFLAGASAIGGSAIASPALAQITTMAAFEKLPPY
Ga0062593_1012724941	3300004114	Soil	MKGTARPGLSRREFLAGASALGGVAIASAAAPMQITTMAPFEKLPPYGNNTL
Ga0062590_1019473132	3300004157	Soil	MKGTATPGLSRREFLAGASAVGGVAIASAAAPTQITTMAPFEKLPPYGN
Ga0062590_1024851171	3300004157	Soil	MKGTATPGLSRREFLAGASALGGVTMASGAAPTQITTMAPFEKLP
Ga0066395_100208215	3300004633	Tropical Forest Soil	MKGTATLGLSRRAFLASASALGSVAIKSSAAPDQITTLAPFEKLPPYGNNTLP
Ga0070677_109006332	3300005333	Miscanthus Rhizosphere	MKATEPPGLSRRAFLAGASALGRATIAFAAAPTQITTMARFEKLPPYGNNTL
Ga0070692_109585022	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MKGTAWPGLSRREFLAGASVFGGVAIAAVAAPAQITTLAPFEKLPPY
Ga0070671_1018243801	3300005355	Switchgrass Rhizosphere	MRTSRFSRREFLAGTSAVLGMAIAPPAAPAQITTTAPFEKLPPYGNGTLPAGV
Ga0070674_1007641011	3300005356	Miscanthus Rhizosphere	MKGTATPGLSRREFLVGASAIGGVAIASAAPPAQITTMAPFEKL
Ga0070705_1016594831	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTSTAATGLSRREFLAGASAIGGVAIASRPEPVEGSAAGAAQITTMAPFEKLPPYGNNTL
Ga0070663_1020393592	3300005455	Corn Rhizosphere	MKSTATPGLSRRGFLAGASAFGAVAIASAAAPPQTTTLAPFEKLPPYGNNT
Ga0070678_1009097422	3300005456	Miscanthus Rhizosphere	VNDTGMRGFSRREFLVGASAVGGVVLASAAVSAQITTMAPFEKLPP
Ga0068867_1004175821	3300005459	Miscanthus Rhizosphere	MTESAKPGLSRREFLAGASAMGSVAIMSAAAPAQITTLAPFEKLPPYGNN
Ga0068867_1018199041	3300005459	Miscanthus Rhizosphere	MRGTSTPGLSRRALLAGASAFGGVAIASTAVQAQIATLTRFERLPPYGNN
Ga0070672_1003936661	3300005543	Miscanthus Rhizosphere	MKGTATSGLSRREFLAGASALGSATIASAAASAQITTMAPFEKLPPYGNNTLPA
Ga0070696_1013668352	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MTSTAATGLSRREFLAGASAIGGVAIASRPEPVEGSAAAPAQITTMAPFEKLPPYGNN
Ga0070665_1015974641	3300005548	Switchgrass Rhizosphere	MKGTATPGLSRREFLAGASALGGVAIASAAAPMQITTMVPFE
Ga0070664_1009095732	3300005564	Corn Rhizosphere	MKGRTTPGLSRRQFLAGASALGSVAMASAAAPAQITTTAPFEKLPPYGN
Ga0070664_1020816281	3300005564	Corn Rhizosphere	MRGFSRREFLVGASAVGGVVLASAAVSAQITTLAPFEKLPPYGNNTLPAGV
Ga0068857_1007365721	3300005577	Corn Rhizosphere	MTSTAATGLSRREFLAGASAIGGVAIASRPEPVEGSAAAPAQITTMAPFEKLPPYG
Ga0068859_1027393082	3300005617	Switchgrass Rhizosphere	MPRLSRREFLAGVSAVGGVAIASAAAPAQITTLAPFAKLPPYGNDTLPAGVTARL
Ga0068864_1017331972	3300005618	Switchgrass Rhizosphere	MKGTATPGLSRREFLAGASAVGGVAIASAAAPTQITTMAPFEKLPPYGNN
Ga0066903_1078606891	3300005764	Tropical Forest Soil	MNRTSTSGLSRRDFLAGASALGGAAIASAATAQITTMAPFEKLPP
Ga0068870_100227491	3300005840	Miscanthus Rhizosphere	MAGLSRREFLVATSALGGVAIAPAAATAQITTLAPFEKLPPYGN
Ga0068870_110366082	3300005840	Miscanthus Rhizosphere	MGESAKPGLSRREFLAGASALGSVAIASAAAPAQITTLAPFEKLPPYGNNTL
Ga0068862_1017821452	3300005844	Switchgrass Rhizosphere	MKGRATSGLSRREFLAGTSAFGAVTIAAARVQITTLAPFEKLPPYGN
Ga0066652_1010876541	3300006046	Soil	MKGTATPGLSRRQFLAGASALGGVAIASGAAPMQITTMAPFEKLSP
Ga0068871_1021573842	3300006358	Miscanthus Rhizosphere	MKGTATPGLSRRQFLAGASALGGVAIASAADPMQITTLAPFAKLPPY
Ga0075428_1024816981	3300006844	Populus Rhizosphere	MTGLSRRAFLAGVSALGGGAVASAAAPAQITTMAPF
Ga0075430_1012787622	3300006846	Populus Rhizosphere	MKGTATPGLSRREFLAGASALGGVAIASAAASAQITTMA
Ga0075434_1015254661	3300006871	Populus Rhizosphere	MRQKFSRRQFLAGASALGGVAIASAAPAQITTMAPF
Ga0075426_105786961	3300006903	Populus Rhizosphere	MKGTATPGLSRRAFLASASALGSVAIKSSAAPDQIATLAPFEKLPPYGN
Ga0105245_106597761	3300009098	Miscanthus Rhizosphere	MAGLSRREFLVATPALGGVAIAPAAATAQITTLAPFEKLPPY
Ga0114129_106934242	3300009147	Populus Rhizosphere	MSESAKPGLSRREFLAGASALGSVAIASAASAQITTLAPSEKLPPY
Ga0105243_118747392	3300009148	Miscanthus Rhizosphere	MKGTATPGLSRREFLAGASALGGVAIASAAATAQITTMAPFE
Ga0105242_123618952	3300009176	Miscanthus Rhizosphere	MPALSRREFLAGGSALGGVAIASAAFPAQITTMAPF
Ga0105248_134054691	3300009177	Switchgrass Rhizosphere	MKGTATPGLSRREFLAGASAVGGVAIASAAAPTQITTIAPFE
Ga0105340_10814762	3300009610	Soil	MKGTATPGLSRREFLAGASAVGGVAIASAAAPTQIT
Ga0126370_120421382	3300010358	Tropical Forest Soil	MKGRASSPGLSRRAFLASASALGSVAIASSAAPAQITTLAPFEK
Ga0126379_119110161	3300010366	Tropical Forest Soil	MPIGNMKGTASPGLSRREFLAGASALSGVAIVSAAAAAQITTMAPFEKLPPYGNNT
Ga0134127_127414931	3300010399	Terrestrial Soil	MTSTAATGLSRREFLAGASAIGGVAIASRPEPVEGSAAAPAQITTMAPFEKLPPYGNNT
Ga0134123_131577972	3300010403	Terrestrial Soil	MKGDMIRTTTLELSRREFLAGASALGGVAIASAASAQITTL
Ga0137334_11514722	3300012179	Soil	MKDTATPGLSRREFLAGASAVGGMAIASAAAPAQITT
Ga0137382_108691441	3300012200	Vadose Zone Soil	MKDTAKPGLSRREFLAGASALGGAAIVSAAAPAQITTMAPFEKLP
Ga0137398_111355551	3300012683	Vadose Zone Soil	MKGTGNPGLSRREFLAGASALGGAAITSAAPAQITTMAP
Ga0157294_100088323	3300012892	Soil	MKGTARPGLSRREFLAGASALGGVAIASAAAPMQITTMAPFEKLPPYGN
Ga0157308_101926522	3300012910	Soil	MKGTTMPGRSRREFLAGASALGSVAIASAATSAQITTMAPFEKLPPYGNTT
Ga0164305_116422242	3300012989	Soil	MKATEPPGLSRRAFLAGASALGRATIAFAAAPTQITTLAPFEKLPPY
Ga0157378_123384531	3300013297	Miscanthus Rhizosphere	MQGTATNGLSRREFLAGASALGGVAIASAAAPAQITTMAPFEKLPPYGNNTLPA
Ga0132256_1005730431	3300015372	Arabidopsis Rhizosphere	MKGRATPGLSRREFLAGASALGGVAIAPRPEPVEGSAASPAQITTLAPFEKL
Ga0132257_1003432422	3300015373	Arabidopsis Rhizosphere	MHELSRRAFLTATSALGGMALALDPEPVEGSASARAQITTMAPFEKLPPYGNN
Ga0184631_102628171	3300018070	Groundwater Sediment	MRGTTRPEFSRREFLAGASALGGVAIASAATAAQITTMAPFER
Ga0190274_102279241	3300018476	Soil	MRGMATPGLSRREFLAGASALGGVTLASAAATAQITTMAPFEKLPSYGNNTL
Ga0190274_121795271	3300018476	Soil	MKGTARPGLSRREFLAGASALGGVAIASAAAPTQITTMAPF
Ga0210380_101373401	3300021082	Groundwater Sediment	MRGTTRPEFSRREFLAGASALGGVAMASAAAAQITTMATFEKLP
Ga0207681_102579261	3300025923	Switchgrass Rhizosphere	VNDTGMRGFSRREFLVGASAVGGVVLASAAVSAQITTLAPFEKLPPYGNNTLPA
Ga0207681_110327661	3300025923	Switchgrass Rhizosphere	MKGTTTPGLSRREFLAGASALGGVAIASAAAPAQITTMA
Ga0207687_116324041	3300025927	Miscanthus Rhizosphere	MAGLSRREFLVATSALGGVAIAPAAATAQITTLAPFEKLPPY
Ga0207701_110278491	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MHELSRRAFLTATSALGGLAIASPARAQITTLASFAKLPPYGNDTLPSGVKPRPV
Ga0207644_114616392	3300025931	Switchgrass Rhizosphere	MKATEPPGLSRRAFLAGASALGRATIAFAAAPTQITTMARFEKLPPY
Ga0207706_101135561	3300025933	Corn Rhizosphere	MKHTTTPGVSRREFLGGASAMAGAALASAAPAQIT
Ga0207709_103987641	3300025935	Miscanthus Rhizosphere	MTGTAMRELSRREFLTGASALGGVAIASAASAQIT
Ga0207669_105094301	3300025937	Miscanthus Rhizosphere	MKGTATPGLSRREFLAGASALGGVTMASGAAPTQITTM
Ga0207711_100803454	3300025941	Switchgrass Rhizosphere	MKGTATPGLSRREFLAGASALGGVAIASAASAQITTIAPYDKLPPYG
Ga0207711_105682671	3300025941	Switchgrass Rhizosphere	MKDTTLPGLSRREFLAGASTLGGVAIASAAAPAQITTLAPFEKLPPYG
Ga0207689_103542541	3300025942	Miscanthus Rhizosphere	MAKGGVEQGGTMKSTATPGLSRRGFLAGASAFGAVAIASAAAPPQTTTLAPFEKL
Ga0207679_107434922	3300025945	Corn Rhizosphere	MKGRTTPGLSRRQFLAGASALGSVAMASAAAPAQITTTAPFEKLPPYGNN
Ga0207651_102037642	3300025960	Switchgrass Rhizosphere	MKGTATPGLSRREFLAGASALGGVAIASAAAPAQI
Ga0207651_117432711	3300025960	Switchgrass Rhizosphere	MKATEPPGLSRRAFLAGASALGRATIAFAAAPTQITTMARFEKLP
Ga0207668_120749821	3300025972	Switchgrass Rhizosphere	MHELSRRAFLTATSALGGLAIASPARAQITTLASFAKLPPYGN
Ga0207677_100678221	3300026023	Miscanthus Rhizosphere	MKSTATPGLSRRGFLAGASAFGAVAIASAAAPPQTTTLAPF
Ga0207678_118193201	3300026067	Corn Rhizosphere	MKSTATPGLSRRGFLAGASAFGAVAIASAAAPPQTTTLAPFEKL
Ga0207641_1000568513	3300026088	Switchgrass Rhizosphere	MKGTATPGLSRREFLAGASALGGVAIASAASAQITTI
Ga0207641_109175131	3300026088	Switchgrass Rhizosphere	MKSTATPGLSRRGFLAGASAFGAVAIASAAAPPQTTTLAPFE
Ga0207676_104697462	3300026095	Switchgrass Rhizosphere	MKGTVTPGLSRREFLAGASALGGVALASAAAPAQITTMAPFEKLPPYGNN
Ga0207674_102108901	3300026116	Corn Rhizosphere	MHELSRRAFLTATSALGGMALALDPEPVEGSASARAQITTMAPFEKLPPYGNNTL
Ga0207674_104247713	3300026116	Corn Rhizosphere	MTSTAATGLSRREFLAGASAIGGVAIASRPEPVEGSAAAPAQITTMAPFEKLPPYGN
Ga0207674_119584371	3300026116	Corn Rhizosphere	MKRSATSGLSRREFLAGASAVGGVAIASAAAPTQITTIAP
Ga0209966_11129461	3300027695	Arabidopsis Thaliana Rhizosphere	VKDTGTPGLSRREFLAGASALGSVAIASAAAPAQIT
Ga0268265_113064051	3300028380	Switchgrass Rhizosphere	MKHTTTPGLSRREFLGAASGIAGAAIASAASAQITTMAPFEKLPPYGNNT
Ga0268265_113110991	3300028380	Switchgrass Rhizosphere	MTGTAMRELSRREFLTGASALGGVAIASAASAQITTLAPFEKLPP
Ga0307296_107015952	3300028819	Soil	MKHTTTPGLSRREFLGGASGIAGAAIASAASAQITTMAPFEKL
Ga0310888_103808192	3300031538	Soil	MKGSATPNLSRREFLAGASALGGAAIASAASAQITTMATFEK
Ga0307408_1011330721	3300031548	Rhizosphere	MKGTATPGLSRREFLAGASALGGVAIASAASPAQITTMAP
Ga0318574_104329812	3300031680	Soil	MSTTTVGFSRREFLAGASAFGGAAIASAGSTTQIT
Ga0310686_1127644221	3300031708	Soil	MKGTATPGLSRREFLAGASALGGAAIASAAAPTQIT
Ga0307469_101199331	3300031720	Hardwood Forest Soil	MKGTATPGLSRRAFLGGASALGSVAIASSAAPAQITTLAPLEKLPPYGNN
Ga0310907_107990512	3300031847	Soil	MKGTTRPEFSRREFLAGASALGGMTMASAAAAAQVTTMAPF
Ga0310892_110991591	3300031858	Soil	MKGTKPGLSRREFLAGASALGGVAIASAASAQITTLAPFEKLPPYGNNT
Ga0310885_108965422	3300031943	Soil	MKGTTRPEFSRREFLAGASALGGVAMASAAGAVQITTMAP
Ga0310903_100404313	3300032000	Soil	MKGTDTPGFSRREFLAGASALGSVAIASAAAPAQITTLAPFERLPPY
Ga0310897_102657941	3300032003	Soil	MKGTDTPGFSRREFLAGASALGSMAIASAAAPAQITTLAP
Ga0307411_112707611	3300032005	Rhizosphere	MKGTITPGLSRREFLAGASALGGVAIAPATAPAQITTMAPFEKLPPYGN
Ga0310890_100756421	3300032075	Soil	MKGTDTPGFSRREFLAGASALGSVAIASAAAPAQI
Ga0310890_116470851	3300032075	Soil	MTPGLSRREFLAGASALGGVAIASAASAQITSLARFEKLPPYGNN
Ga0315910_102395061	3300032144	Soil	MARTATPILSRREFLAGASALGGVVIASATTASQITTLTPFEKLPPY
Ga0315912_106187461	3300032157	Soil	MKSTATPGVSRRGFLAGASAFGTVAIASAAAPVQITTLATFEKLPP
Ga0315912_107488521	3300032157	Soil	MKGTATPGLSRRAFLAGASALGGVVSASAAAPAQITTMAPFEKLPPYGN
Ga0307472_1005614282	3300032205	Hardwood Forest Soil	MKGTATPGLSRRAFLGGASALGSVAIASSAASAQITTLAPFEKLPP
Ga0310896_100632243	3300032211	Soil	MKGTTRPEFSRREFLAGASALGGMTMASAAAAAQVTTMAPFEKLPPYGNNTLPV
Ga0364925_0176348_3_116	3300034147	Sediment	MRRQGGIMKGTATPGLSRRAFLAGASALGGVAMASAAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.26
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.26
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F097416

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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